Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002040.1

Orthogroup ID

OG0005392

Physical Location & Seq

Genomic Coordinates Reverse (-)

268042 .. 272948

Gene Structure 4907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002040.1_g000062.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

atggctccaagcctaagcaagaacaatgccgcagacgtaatgggccttgtagacagcaactcaccactgtcaataacactacaaggcacaaacttccttgccaacggccacccaatcctcacagaagtcccactaaacatcacagccactccatcaacaaacaaaaccaccgtgggctgcttcattggcttcgacgccgacgagcccaaaagccgccatgtggcgccactcggcaagctcagcggcatcaagttcatgagcattttccggttcaaagtctggtggaccacccactgggtcggaacatccggaaacgacatgcagcacgagactcagttcatgatcctcgacaaaaaagactccaccggccgcccctacgtcctcctccttccacttctcgaaggtcccttcagagcctccctccaacccggcaccgactgccacgttgacatgtgcgtcgagagtggctcgacacgtgtcagtgaatccaccttccggagcgttctgtacatgcacgtcggcaacgacccgtacggtcttgtcaaagaggccatggaggtggtgagagtccatttgggaagcttcaagcttctggaggagaagacgcctccgcctatagtggacaagtttggttggtgcacgtgggatgcgttttatcttatggtgcaccccaagggagtttgggaaggggttaagggcctagtggagggtgggtgtcctccgggaatggtactcatcgacgacggctggcagtccatttgtcacgatgacgaccccctaaccgacgaagaagccatgaaaaggacatctgccggtgagcaaatgccatgtaggctcacaagtttcgtagaaaactacaagttcagagactataagagccctagtggtaagggcatgggtgcctttgttaaggacttgaaggaggagtttgggagcgtggactatgtttatgtttggcacgcgctatgtgggtattggggtggggttagacccggggtgaagagcgggtcgggttttccggagagccgggtgattaggccgaagctgtcggagggtttggagaagacgatggaggatttggcggtggacaagatcgtgaacaatggagtggggctggtggaaccggagatggcccacaagttgtatgaggggcttcatcagcatcttcagtcggtcgggatcgacggtgtcaaggtcgatgtcatacacttgcttgagatgttatccgaggagtttggtggtcggattgagctggccaaagcttattacaaggcacttactgcttctgtgaggaaacatttcaaaggcaatggagtgattgctagcatggagcactgcaatgatttcatgtatcttggcacagaagccatttcacttggtcgcgttggagacgacttttggtgctctgacccgtctggagatccaaatgggacatattggctacaagggtgtcacatggtccattgtgcctacaatagcttgtggatggggaacttcgtacatccagattgggacatgtttcagtcgactcacccttgtgctgcatttcatgctgcatcaagagccatatcgggagggccgatctatatcagcgattctgtgggacagcacaacttcaagcttcttaagagtctggtgttgcctgatggatccatattaagatgccaatactatgcacttcctactagggattgcctatttgaggaccctgttcatgatgggaaaacaatgctcaagatttggaacctcaacaagtacaccggcgttctaggactttttaactgccaaggaggagggtggtgccccaaatcaaggcgcaacaaaagcttccctgagttctcaaagtcggtgacttgtttggcaaccccaaaagatgtggaatggagtcatgggaagaacccgattccaataaaagaaatcgacgtatttgctgtgtacatgttccaggaaaagaagctgaagcttttgaagccagcggatacggtagagatttcacttcagcctttcagttatgagctcctcaccattgctccagtgagagtgctaccaacaaagttgatccaatttgctccaattggattggtgaacatgctcaacactggtggtgcaattcagtcactagaatttgaggatggtgaaactgtcgtgaggattggactgaagggcagtggagagatgagaacatttgcatcagaaaaaccaactgcttgtaaggttggtggagaggaagtgaaatttgattatgttgataagatggttattgtccaagtgcaatggcctagctcttcaataacaaccgtggttgagtacttcttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

772

Amino Acids

85.65

Weight (kDa)

5.96

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40390
fragaria_vesca	FvH4_5g05860 FvH4_6g51380
malus_domestica	MD06G1169800.v1.1 MD14G1175300.v1.1 MD17G1030100.v1.1
prunus_persica	Prupe.3G289900_v2.0.a1
pyrus_communis	pycom06g15120 pycom14g14630 pycom17g02750
rosa_chinensis	RchiOBHm_Chr2g0173061 RchiOBHm_Chr7g0192961
rosa_laevigata	RLG00000004308 RLG00000022154
rosa_multiflora	Rmu_sc0002040.1_g000062 Rmu_sc0011236.1_g000005
rosa_roxburghii	Rroxscaffold_2G00079280 Rroxscaffold_3G00262500
rosa_rugosa	Rorug02G0564900 Rorug07G0006500
rosa_samantha	Rh2AG644700 Rh2BG655500 Rh2CG620600 Rh2DG668800 Rh7AG131800 Rh7BG132600 Rh7DG133700
rosa_wichuraiana	Rw2G052950 Rw7G011240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	455
AccB1I	GGYRCC	4 cut(s)	223, 431, 899, 1800
AccB7I	CCANNNNNTGG	1 cut(s)	294
AccBSI	CCGCTC	1 cut(s)	1005
AccI	GTMKAC	2 cut(s)	51, 1526
AccII	CGCG	2 cut(s)	962, 1383
AccIII	TCCGGA	3 cut(s)	308, 495, 1018
AciI	CCGC	8 cut(s)	30, 214, 243, 370, 611, 1005, 1082, 1976
AclWI	GGATC	6 cut(s)	337, 1187, 1415, 1644, 1657, 2053
AcoI	YGGCCR	3 cut(s)	106, 367, 1254
AcsI	RAATTY	2 cut(s)	2123, 2234
AcuI	CTGAAG	5 cut(s)	394, 1151, 1979, 1982, 2180
AcvI	CACGTG	2 cut(s)	476, 642
AcyI	GRCGYC	3 cut(s)	195, 224, 605
AfaI	GTAC	7 cut(s)	509, 533, 732, 1500, 1757, 1937, 2309
AfiI	CCNNNNNNNGG	7 cut(s)	220, 294, 495, 706, 801, 1702, 1812
AflII	CTTAAG	1 cut(s)	1625
AflIII	ACRYGT	5 cut(s)	450, 473, 475, 1515, 1938
AgsI	TTSAA	7 cut(s)	274, 586, 919, 1303, 1618, 1969, 2289
AjiI	CACGTC	1 cut(s)	517
AjnI	CCWGG	1 cut(s)	1944
AleI	CACNNNNGTG	1 cut(s)	1536
Alw21I	GWGCWC	5 cut(s)	641, 669, 1335, 1406, 2019
Alw26I	GTCTC	3 cut(s)	323, 861, 1383
Alw44I	GTGCAC	2 cut(s)	637, 665
AlwI	GGATC	6 cut(s)	337, 1187, 1415, 1644, 1657, 2053
Ama87I	CYCGRG	1 cut(s)	992
Aor13HI	TCCGGA	3 cut(s)	308, 495, 1018
ApaLI	GTGCAC	2 cut(s)	637, 665
ApeKI	GCWGC	4 cut(s)	177, 322, 1541, 1553
ApoI	RAATTY	2 cut(s)	2123, 2234
Asp700I	GAANNNNTTC	1 cut(s)	1298
AspLEI	GCGC	3 cut(s)	226, 964, 1818
AspS9I	GGNCC	8 cut(s)	43, 285, 404, 697, 1132, 1459, 1577, 1705
AsuC2I	CCSGG	5 cut(s)	429, 723, 993, 994, 1028
AsuNHI	GCTAGC	1 cut(s)	1322
AvaI	CYCGRG	1 cut(s)	992
AvaII	GGWCC	4 cut(s)	285, 404, 1459, 1705
BaeGI	GKGCMC	3 cut(s)	641, 669, 1805
BalI	TGGCCA	1 cut(s)	1256
BamHI	GGATCC	1 cut(s)	1649
BanI	GGYRCC	4 cut(s)	223, 431, 899, 1800
BanII	GRGCYC	3 cut(s)	207, 881, 2019
BauI	CACGAG	1 cut(s)	326
BbrPI	CACGTG	2 cut(s)	476, 642
BbsI	GAAGAC	2 cut(s)	608, 1070
Bbv12I	GWGCWC	5 cut(s)	641, 669, 1335, 1406, 2019
BbvI	GCAGC	4 cut(s)	164, 334, 1528, 1540
BccI	CCATC	8 cut(s)	160, 1063, 1123, 1480, 1640, 1712, 2126, 2248
BceAI	ACGGC	2 cut(s)	121, 760
BcgI	CGANNNNNNTGC	2 cut(s)	1910, 1944
BciT130I	CCWGG	1 cut(s)	1946
BciVI	GTATCC	1 cut(s)	1972
BcnI	CCSGG	5 cut(s)	429, 723, 993, 994, 1028
BcoDI	GTCTC	3 cut(s)	323, 861, 1383
BfaI	CTAG	7 cut(s)	701, 882, 1323, 1686, 1769, 2120, 2280
BfmI	CTRYAG	1 cut(s)	615
BfoI	RGCGCY	1 cut(s)	227
BfrI	CTTAAG	1 cut(s)	1625
BfuI	GTATCC	1 cut(s)	1972
BglI	GCCNNNNNGGC	1 cut(s)	832
BisI	GCNGC	8 cut(s)	30, 178, 214, 244, 323, 370, 1542, 1554
BlpI	GCTNAGC	1 cut(s)	239
BlsI	GCNGC	8 cut(s)	31, 179, 215, 245, 324, 371, 1543, 1555
BmcAI	AGTACT	1 cut(s)	2309
Bme1390I	CCNGG	6 cut(s)	429, 723, 993, 994, 1028, 1946
Bme18I	GGWCC	4 cut(s)	285, 404, 1459, 1705
BmeT110I	CYCGRG	1 cut(s)	992
BmgBI	CACGTC	1 cut(s)	517
BmgT120I	GGNCC	8 cut(s)	43, 285, 404, 697, 1132, 1459, 1577, 1705
BmrFI	CCNGG	6 cut(s)	429, 723, 993, 994, 1028, 1946
BmrI	ACTGGG	1 cut(s)	304
BmsI	GCATC	6 cut(s)	255, 637, 1171, 1565, 1652, 2198
BmtI	GCTAGC	1 cut(s)	1326
BmuI	ACTGGG	1 cut(s)	304
BoxI	GACNNNNGTC	1 cut(s)	476
BpiI	GAAGAC	2 cut(s)	608, 1070
BplI	GAGNNNNNCTC	4 cut(s)	405, 437, 452, 484
BpmI	CTGGAG	3 cut(s)	614, 1437, 2016
Bpu10I	CCTNAGC	1 cut(s)	14
Bpu1102I	GCTNAGC	1 cut(s)	239
BpuEI	CTTGAG	2 cut(s)	1235, 1718
BpuMI	CCSGG	5 cut(s)	429, 723, 993, 994, 1028
BsaAI	YACGTR	2 cut(s)	476, 642
BsaBI	GATNNNNATC	1 cut(s)	1586
BsaHI	GRCGYC	3 cut(s)	195, 224, 605
BsaJI	CCNNGG	8 cut(s)	171, 552, 672, 992, 993, 1227, 1786, 2298
BsaWI	WCCGGW	5 cut(s)	267, 308, 495, 1018, 1123
BsaXI	ACNNNNNCTCC	8 cut(s)	133, 163, 698, 728, 2014, 2044, 2214, 2244
Bsc4I	CCNNNNNNNGG	7 cut(s)	220, 294, 495, 706, 801, 1702, 1812
Bse118I	RCCGGY	3 cut(s)	365, 812, 1760
Bse1I	ACTGG	3 cut(s)	299, 2033, 2104
Bse3DI	GCAATG	4 cut(s)	1315, 1345, 2025, 2279
Bse8I	GATNNNNATC	1 cut(s)	1586
BseAI	TCCGGA	3 cut(s)	308, 495, 1018
BseBI	CCWGG	1 cut(s)	1946
BseDI	CCNNGG	8 cut(s)	171, 552, 672, 992, 993, 1227, 1786, 2298
BseGI	GGATG	5 cut(s)	305, 652, 1491, 1501, 2137
BseJI	GATNNNNATC	1 cut(s)	1586
BseLI	CCNNNNNNNGG	7 cut(s)	220, 294, 495, 706, 801, 1702, 1812
BseMI	GCAATG	4 cut(s)	1315, 1345, 2025, 2279
BseMII	CTCAG	3 cut(s)	253, 347, 1824
BseNI	ACTGG	3 cut(s)	299, 2033, 2104
BseRI	GAGGAG	6 cut(s)	374, 611, 938, 1244, 1806, 2009
BseSI	GKGCMC	3 cut(s)	641, 669, 1805
BseX3I	CGGCCG	1 cut(s)	367
BseXI	GCAGC	4 cut(s)	164, 334, 1528, 1540
Bsh1236I	CGCG	2 cut(s)	962, 1383
Bsh1285I	CGRYCG	2 cut(s)	370, 1176
BshNI	GGYRCC	4 cut(s)	223, 431, 899, 1800
BsiEI	CGRYCG	2 cut(s)	370, 1176
BsiHKAI	GWGCWC	5 cut(s)	641, 669, 1335, 1406, 2019
BsiHKCI	CYCGRG	1 cut(s)	992
BsiWI	CGTACG	1 cut(s)	531
BslFI	GGGAC	5 cut(s)	113, 390, 1444, 1526, 1617
BslI	CCNNNNNNNGG	7 cut(s)	220, 294, 495, 706, 801, 1702, 1812
BsmAI	GTCTC	3 cut(s)	323, 861, 1383
BsmBI	CGTCTC	1 cut(s)	1383
BsmFI	GGGAC	5 cut(s)	113, 390, 1444, 1526, 1617
BsoBI	CYCGRG	1 cut(s)	992
Bsp1286I	GDGCHC	8 cut(s)	207, 641, 669, 881, 1335, 1406, 1805, 2019
Bsp13I	TCCGGA	3 cut(s)	308, 495, 1018
Bsp1407I	TGTACA	2 cut(s)	507, 1935
Bsp143I	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
Bsp1720I	GCTNAGC	1 cut(s)	239
Bsp19I	CCATGG	1 cut(s)	552
BspACI	CCGC	8 cut(s)	30, 214, 243, 370, 611, 1005, 1082, 1976
BspCNI	CTCAG	3 cut(s)	252, 346, 1825
BspEI	TCCGGA	3 cut(s)	308, 495, 1018
BspFNI	CGCG	2 cut(s)	962, 1383
BspHI	TCATGA	3 cut(s)	255, 339, 1714
BspOI	GCTAGC	1 cut(s)	1326
BspPI	GGATC	6 cut(s)	337, 1187, 1415, 1644, 1657, 2053
BspQI	GCTCTTC	2 cut(s)	995, 2290
BspT107I	GGYRCC	4 cut(s)	223, 431, 899, 1800
BspTI	CTTAAG	1 cut(s)	1625
BsrBI	CCGCTC	1 cut(s)	1005
BsrDI	GCAATG	4 cut(s)	1315, 1345, 2025, 2279
BsrFI	RCCGGY	3 cut(s)	365, 812, 1760
BsrGI	TGTACA	2 cut(s)	507, 1935
BsrI	ACTGG	3 cut(s)	299, 2033, 2104
BssAI	RCCGGY	3 cut(s)	365, 812, 1760
BssECI	CCNNGG	8 cut(s)	171, 552, 672, 992, 993, 1227, 1786, 2298
BssMI	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
BssNI	GRCGYC	3 cut(s)	195, 224, 605
BssSI	CACGAG	1 cut(s)	326
BssT1I	CCWWGG	3 cut(s)	552, 672, 1786
Bst2BI	CACGAG	1 cut(s)	326
Bst2UI	CCWGG	1 cut(s)	1946
Bst4CI	ACNGT	7 cut(s)	69, 172, 536, 1187, 1984, 2143, 2299
Bst6I	CTCTTC	2 cut(s)	995, 2290
BstACI	GRCGYC	3 cut(s)	195, 224, 605
BstAFI	CTTAAG	1 cut(s)	1625
BstAPI	GCANNNNNTGC	3 cut(s)	438, 1280, 1550
BstAUI	TGTACA	2 cut(s)	507, 1935
BstBAI	YACGTR	2 cut(s)	476, 642
BstC8I	GCNNGC	6 cut(s)	236, 749, 960, 1254, 1324, 1974
BstDEI	CTNAG	4 cut(s)	14, 239, 333, 1833
BstDSI	CCRYGG	3 cut(s)	171, 552, 2298
BstENI	CCTNNNNNAGG	2 cut(s)	704, 1700
BstF5I	GGATG	5 cut(s)	305, 652, 1491, 1501, 2137
BstFNI	CGCG	2 cut(s)	962, 1383
BstH2I	RGCGCY	1 cut(s)	227
BstHHI	GCGC	3 cut(s)	226, 964, 1818
BstKTI	GATC	7 cut(s)	345, 1095, 1182, 1423, 1584, 1652, 2061
BstMAI	GTCTC	3 cut(s)	323, 861, 1383
BstMBI	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
BstMCI	CGRYCG	2 cut(s)	370, 1176
BstNI	CCWGG	1 cut(s)	1946
BstNSI	RCATGY	6 cut(s)	322, 454, 514, 1519, 1942, 2092
BstPAI	GACNNNNGTC	1 cut(s)	476
BstSCI	CCNGG	6 cut(s)	427, 721, 991, 992, 1026, 1944
BstSFI	CTRYAG	1 cut(s)	615
BstSLI	GKGCMC	3 cut(s)	641, 669, 1805
BstUI	CGCG	2 cut(s)	962, 1383
BstV1I	GCAGC	4 cut(s)	164, 334, 1528, 1540
BstV2I	GAAGAC	2 cut(s)	608, 1070
BstX2I	RGATCY	2 cut(s)	1420, 1649
BstXI	CCANNNNNNTGG	1 cut(s)	559
BstYI	RGATCY	2 cut(s)	1420, 1649
BstZI	CGGCCG	1 cut(s)	367
BsuI	GTATCC	1 cut(s)	1972
BtgI	CCRYGG	3 cut(s)	171, 552, 2298
BtrI	CACGTC	1 cut(s)	517
BtsCI	GGATG	5 cut(s)	305, 652, 1491, 1501, 2137
BtsI	GCAGTG	2 cut(s)	1333, 2173
BtsIMutI	CAGTG	7 cut(s)	65, 292, 487, 1333, 2040, 2097, 2173
Cac8I	GCNNGC	6 cut(s)	236, 749, 960, 1254, 1324, 1974
CciI	TCATGA	3 cut(s)	255, 339, 1714
CfoI	GCGC	3 cut(s)	226, 964, 1818
Cfr10I	RCCGGY	3 cut(s)	365, 812, 1760
Cfr13I	GGNCC	8 cut(s)	43, 285, 404, 697, 1132, 1459, 1577, 1705
Cfr9I	CCCGGG	1 cut(s)	992
CseI	GACGC	3 cut(s)	203, 445, 613
Csp6I	GTAC	7 cut(s)	508, 532, 731, 1499, 1756, 1936, 2308
CspCI	CAANNNNNGTGG	4 cut(s)	1857, 1892, 2083, 2118
CviQI	GTAC	7 cut(s)	508, 532, 731, 1499, 1756, 1936, 2308
DdeI	CTNAG	4 cut(s)	14, 239, 333, 1833
DinI	GGCGCC	1 cut(s)	225
DpnI	GATC	7 cut(s)	344, 1094, 1181, 1422, 1583, 1651, 2060
DpnII	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
DrdI	GACNNNNNNGTC	1 cut(s)	455
DseDI	GACNNNNNNGTC	1 cut(s)	455
EaeI	YGGCCR	3 cut(s)	106, 367, 1254
EagI	CGGCCG	1 cut(s)	367
Eam1104I	CTCTTC	2 cut(s)	995, 2290
EarI	CTCTTC	2 cut(s)	995, 2290
EciI	GGCGGA	1 cut(s)	600
Ecl136II	GAGCTC	1 cut(s)	2017
EclXI	CGGCCG	1 cut(s)	367
Eco130I	CCWWGG	3 cut(s)	552, 672, 1786
Eco24I	GRGCYC	3 cut(s)	207, 881, 2019
Eco47I	GGWCC	4 cut(s)	285, 404, 1459, 1705
Eco52I	CGGCCG	1 cut(s)	367
Eco53kI	GAGCTC	1 cut(s)	2017
Eco57I	CTGAAG	5 cut(s)	394, 1151, 1979, 1982, 2180
Eco72I	CACGTG	2 cut(s)	476, 642
Eco88I	CYCGRG	1 cut(s)	992
EcoICRI	GAGCTC	1 cut(s)	2017
EcoNI	CCTNNNNNAGG	2 cut(s)	704, 1700
EcoO109I	RGGNCCY	3 cut(s)	404, 697, 1705
EcoRII	CCWGG	1 cut(s)	1944
EcoT14I	CCWWGG	3 cut(s)	552, 672, 1786
EcoT38I	GRGCYC	3 cut(s)	207, 881, 2019
EgeI	GGCGCC	1 cut(s)	225
EheI	GGCGCC	1 cut(s)	225
ErhI	CCWWGG	3 cut(s)	552, 672, 1786
Esp3I	CGTCTC	1 cut(s)	1383
FaqI	GGGAC	5 cut(s)	113, 390, 1444, 1526, 1617
FauI	CCCGC	1 cut(s)	998
FblI	GTMKAC	2 cut(s)	51, 1526
Fnu4HI	GCNGC	8 cut(s)	30, 178, 214, 244, 323, 370, 1542, 1554
FokI	GGATG	5 cut(s)	292, 659, 1488, 1498, 2144
FriOI	GRGCYC	3 cut(s)	207, 881, 2019
Fsp4HI	GCNGC	8 cut(s)	30, 178, 214, 244, 323, 370, 1542, 1554
FspBI	CTAG	7 cut(s)	701, 882, 1323, 1686, 1769, 2120, 2280
GlaI	GCGC	3 cut(s)	225, 963, 1817
GluI	GCNGC	8 cut(s)	30, 178, 214, 244, 323, 370, 1542, 1554
GsuI	CTGGAG	3 cut(s)	614, 1437, 2016
HaeII	RGCGCY	1 cut(s)	227
HgaI	GACGC	3 cut(s)	203, 445, 613
HhaI	GCGC	3 cut(s)	226, 964, 1818
Hin1I	GRCGYC	3 cut(s)	195, 224, 605
Hin6I	GCGC	3 cut(s)	224, 962, 1816
HinP1I	GCGC	3 cut(s)	224, 962, 1816
HincII	GTYRAC	2 cut(s)	448, 1527
HindII	GTYRAC	2 cut(s)	448, 1527
HindIII	AAGCTT	6 cut(s)	580, 587, 1260, 1619, 1825, 1961
HinfI	GANTC	9 cut(s)	331, 359, 485, 567, 1528, 1595, 1630, 1885, 1903
Hpy188I	TCNGA	8 cut(s)	302, 413, 866, 1051, 1228, 1245, 1408, 2194
Hpy99I	CGWCG	9 cut(s)	197, 203, 461, 521, 743, 746, 788, 1187, 1925
HpyAV	CCTTC	7 cut(s)	395, 398, 418, 502, 680, 913, 2155
HpyCH4III	ACNGT	7 cut(s)	69, 172, 536, 1187, 1984, 2143, 2299
HpyCH4IV	ACGT	7 cut(s)	36, 378, 444, 475, 516, 641, 1923
HpyF3I	CTNAG	4 cut(s)	14, 239, 333, 1833
HpySE526I	ACGT	7 cut(s)	36, 378, 444, 475, 516, 641, 1923
Hsp92I	GRCGYC	3 cut(s)	195, 224, 605
HspAI	GCGC	3 cut(s)	224, 962, 1816
KasI	GGCGCC	1 cut(s)	223
Kpn2I	TCCGGA	3 cut(s)	308, 495, 1018
Kzo9I	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
LguI	GCTCTTC	2 cut(s)	995, 2290
LmnI	GCTCC	7 cut(s)	10, 498, 933, 1330, 2022, 2035, 2074
Lsp1109I	GCAGC	4 cut(s)	164, 334, 1528, 1540
LweI	GCATC	6 cut(s)	255, 637, 1171, 1565, 1652, 2198
MaeI	CTAG	7 cut(s)	701, 882, 1323, 1686, 1769, 2120, 2280
MaeII	ACGT	7 cut(s)	36, 378, 444, 475, 516, 641, 1923
MaeIII	GTNAC	4 cut(s)	761, 1451, 1849, 2115
MalI	GATC	7 cut(s)	344, 1094, 1181, 1422, 1583, 1651, 2060
MbiI	CCGCTC	1 cut(s)	1005
MboI	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
MboII	GAAGA	7 cut(s)	613, 800, 1012, 1075, 1157, 1906, 2277
MfeI	CAATTG	1 cut(s)	2073
MflI	RGATCY	2 cut(s)	1420, 1649
MhlI	GDGCHC	8 cut(s)	207, 641, 669, 881, 1335, 1406, 1805, 2019
MlsI	TGGCCA	1 cut(s)	1256
MluCI	AATT	5 cut(s)	2063, 2073, 2109, 2123, 2234
MluNI	TGGCCA	1 cut(s)	1256
Mly113I	GGCGCC	1 cut(s)	224
MlyI	GAGTC	6 cut(s)	325, 353, 576, 1522, 1639, 1894
MmeI	TCCRAC	5 cut(s)	280, 448, 1029, 1223, 1366
Mox20I	TGGCCA	1 cut(s)	1256
MroI	TCCGGA	3 cut(s)	308, 495, 1018
MroXI	GAANNNNTTC	1 cut(s)	1298
MscI	TGGCCA	1 cut(s)	1256
MseI	TTAA	5 cut(s)	693, 909, 1626, 1658, 1779
MslI	CAYNNNNRTG	3 cut(s)	557, 1338, 1536
Msp20I	TGGCCA	1 cut(s)	1256
MspA1I	CMGCKG	2 cut(s)	243, 1976
MspCI	CTTAAG	1 cut(s)	1625
MspR9I	CCNGG	6 cut(s)	429, 723, 993, 994, 1028, 1946
MunI	CAATTG	1 cut(s)	2073
MvaI	CCWGG	1 cut(s)	1946
MvnI	CGCG	2 cut(s)	962, 1383
NarI	GGCGCC	1 cut(s)	224
NciI	CCSGG	5 cut(s)	429, 723, 993, 994, 1028
NcoI	CCATGG	1 cut(s)	552
NdeII	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
NheI	GCTAGC	1 cut(s)	1322
NmeAIII	GCCGAG	1 cut(s)	210
NmuCI	GTSAC	4 cut(s)	761, 1451, 1849, 2115
NspI	RCATGY	6 cut(s)	322, 454, 514, 1519, 1942, 2092
OliI	CACNNNNGTG	1 cut(s)	1536
PagI	TCATGA	3 cut(s)	255, 339, 1714
PciI	ACATGT	3 cut(s)	450, 1515, 1938
PciSI	GCTCTTC	2 cut(s)	995, 2290
PcsI	WCGNNNNNNNCGW	4 cut(s)	198, 522, 647, 1577
PdmI	GAANNNNTTC	1 cut(s)	1298
PfeI	GAWTC	3 cut(s)	485, 1595, 1903
Pfl23II	CGTACG	1 cut(s)	531
PflFI	GACNNNGTC	1 cut(s)	1187
PflMI	CCANNNNNTGG	1 cut(s)	294
PfoI	TCCNGGA	2 cut(s)	721, 1944
PkrI	GCNGC	8 cut(s)	31, 179, 215, 245, 324, 371, 1543, 1555
PleI	GAGTC	6 cut(s)	325, 353, 575, 1522, 1638, 1893
PluTI	GGCGCC	1 cut(s)	227
PmaCI	CACGTG	2 cut(s)	476, 642
PmlI	CACGTG	2 cut(s)	476, 642
PpsI	GAGTC	6 cut(s)	325, 353, 575, 1522, 1638, 1893
Ppu21I	YACGTR	2 cut(s)	476, 642
PpuMI	RGGWCCY	2 cut(s)	404, 1705
PscI	ACATGT	3 cut(s)	450, 1515, 1938
PshAI	GACNNNNGTC	1 cut(s)	476
Psp124BI	GAGCTC	1 cut(s)	2019
Psp5II	RGGWCCY	2 cut(s)	404, 1705
Psp6I	CCWGG	1 cut(s)	1944
PspCI	CACGTG	2 cut(s)	476, 642
PspGI	CCWGG	1 cut(s)	1944
PspLI	CGTACG	1 cut(s)	531
PspPI	GGNCC	8 cut(s)	43, 285, 404, 697, 1132, 1459, 1577, 1705
PspPPI	RGGWCCY	2 cut(s)	404, 1705
PsuI	RGATCY	2 cut(s)	1420, 1649
PsyI	GACNNNGTC	1 cut(s)	1187
RsaI	GTAC	7 cut(s)	509, 533, 732, 1500, 1757, 1937, 2309
RsaNI	GTAC	7 cut(s)	508, 532, 731, 1499, 1756, 1936, 2308
RseI	CAYNNNNRTG	3 cut(s)	557, 1338, 1536
SacI	GAGCTC	1 cut(s)	2019
SalI	GTCGAC	1 cut(s)	1525
SapI	GCTCTTC	2 cut(s)	995, 2290
SaqAI	TTAA	5 cut(s)	693, 909, 1626, 1658, 1779
SatI	GCNGC	8 cut(s)	30, 178, 214, 244, 323, 370, 1542, 1554
Sau3AI	GATC	7 cut(s)	342, 1092, 1179, 1420, 1581, 1649, 2058
Sau96I	GGNCC	8 cut(s)	43, 285, 404, 697, 1132, 1459, 1577, 1705
ScaI	AGTACT	1 cut(s)	2309
SchI	GAGTC	6 cut(s)	325, 353, 576, 1522, 1639, 1894
ScrFI	CCNGG	6 cut(s)	429, 723, 993, 994, 1028, 1946
SduI	GDGCHC	8 cut(s)	207, 641, 669, 881, 1335, 1406, 1805, 2019
SfaNI	GCATC	6 cut(s)	255, 637, 1171, 1565, 1652, 2198
SfcI	CTRYAG	1 cut(s)	615
SfoI	GGCGCC	1 cut(s)	225
SgrAI	CRCCGGYG	1 cut(s)	1760
SinI	GGWCC	4 cut(s)	285, 404, 1459, 1705
SmaI	CCCGGG	1 cut(s)	994
SmiMI	CAYNNNNRTG	3 cut(s)	557, 1338, 1536
SmlI	CTYRAG	3 cut(s)	1214, 1625, 1733
SmoI	CTYRAG	3 cut(s)	1214, 1625, 1733
Sse9I	AATT	5 cut(s)	2063, 2073, 2109, 2123, 2234
SsiI	CCGC	8 cut(s)	30, 214, 243, 370, 611, 1005, 1082, 1976
SspDI	GGCGCC	1 cut(s)	223
SspMI	CTAG	7 cut(s)	701, 882, 1323, 1686, 1769, 2120, 2280
SstI	GAGCTC	1 cut(s)	2019
StyD4I	CCNGG	6 cut(s)	427, 721, 991, 992, 1026, 1944
StyI	CCWWGG	3 cut(s)	552, 672, 1786
TaaI	ACNGT	7 cut(s)	69, 172, 536, 1187, 1984, 2143, 2299
TaiI	ACGT	7 cut(s)	39, 381, 447, 478, 519, 644, 1926
TaqII	GACCGA	1 cut(s)	1162
TasI	AATT	5 cut(s)	2063, 2073, 2109, 2123, 2234
TatI	WGTACW	4 cut(s)	507, 1755, 1935, 2307
TauI	GCSGC	4 cut(s)	32, 216, 246, 372
TfiI	GAWTC	3 cut(s)	485, 1595, 1903
Tru1I	TTAA	5 cut(s)	693, 909, 1626, 1658, 1779
Tru9I	TTAA	5 cut(s)	693, 909, 1626, 1658, 1779
TscAI	CASTG	7 cut(s)	72, 299, 487, 1340, 2040, 2104, 2173
TseFI	GTSAC	4 cut(s)	761, 1451, 1849, 2115
TseI	GCWGC	4 cut(s)	177, 322, 1541, 1553
Tsp45I	GTSAC	4 cut(s)	761, 1451, 1849, 2115
TspDTI	ATGAA	8 cut(s)	172, 244, 328, 812, 1145, 1336, 1538, 1703
TspMI	CCCGGG	1 cut(s)	992
TspRI	CASTG	7 cut(s)	72, 299, 487, 1340, 2040, 2104, 2173
Tth111I	GACNNNGTC	1 cut(s)	1187
Van91I	CCANNNNNTGG	1 cut(s)	294
Vha464I	CTTAAG	1 cut(s)	1625
VneI	GTGCAC	2 cut(s)	637, 665
VpaK11BI	GGWCC	4 cut(s)	285, 404, 1459, 1705
XagI	CCTNNNNNAGG	2 cut(s)	704, 1700
XapI	RAATTY	2 cut(s)	2123, 2234
XceI	RCATGY	6 cut(s)	322, 454, 514, 1519, 1942, 2092
XmaI	CCCGGG	1 cut(s)	992
XmiI	GTMKAC	2 cut(s)	51, 1526
XmnI	GAANNNNTTC	1 cut(s)	1298
XspI	CTAG	7 cut(s)	701, 882, 1323, 1686, 1769, 2120, 2280
ZrmI	AGTACT	1 cut(s)	2309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.