Long chain base biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G36480 AT4G36480 AT4G36480 |
| fragaria_vesca | FvH4_2g33970 FvH4_2g33970 FvH4_2g33970 FvH4_2g33970 FvH4_2g33970 FvH4_2g33970 FvH4_7g01911 |
| malus_domestica | MD08G1095600.v1.1 MD15G1077700.v1.1 |
| prunus_persica | Prupe.1G431600_v2.0.a1 Prupe.1G431600_v2.0.a1 Prupe.1G431600_v2.0.a1 |
| pyrus_communis | pycom08g07730 pycom15g07230 |
| rosa_chinensis | RchiOBHm_Chr6g0308441 RchiOBHm_Chr7g0217761 |
| rosa_laevigata | RLG00000002440 RLG00000010643 |
| rosa_multiflora | Rmu_sc0011796.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00241690 Rroxscaffold_7G00160130 |
| rosa_rugosa | Rorug06G0366800 Rorug07G0171100 |
| rosa_samantha | Rh6AG476400 Rh6BG486600 Rh6CG491800 Rh6DG477900 Rh7BG303700 Rh7CG330700 |
| rosa_wichuraiana | Rw6G041560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 16 |
| AciI | CCGC | 2 cut(s) | 60, 279 |
| AclWI | GGATC | 2 cut(s) | 132, 145 |
| AcsI | RAATTY | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 408 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 248, 278 |
| AflII | CTTAAG | 1 cut(s) | 400 |
| AflIII | ACRYGT | 2 cut(s) | 84, 409 |
| AjnI | CCWGG | 1 cut(s) | 140 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 194, 226 |
| AluBI | AGCT | 3 cut(s) | 32, 101, 254 |
| AluI | AGCT | 3 cut(s) | 32, 101, 254 |
| AlwI | GGATC | 2 cut(s) | 132, 145 |
| ApeKI | GCWGC | 1 cut(s) | 224 |
| ApoI | RAATTY | 1 cut(s) | 202 |
| AsuHPI | GGTGA | 1 cut(s) | 211 |
| AsuII | TTCGAA | 1 cut(s) | 66 |
| AsuNHI | GCTAGC | 1 cut(s) | 353 |
| BamHI | GGATCC | 1 cut(s) | 137 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BciT130I | CCWGG | 1 cut(s) | 142 |
| BclI | TGATCA | 1 cut(s) | 295 |
| BfaI | CTAG | 2 cut(s) | 48, 354 |
| BfrI | CTTAAG | 1 cut(s) | 400 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| Bme1390I | CCNGG | 1 cut(s) | 142 |
| BmiI | GGNNCC | 1 cut(s) | 139 |
| BmrFI | CCNGG | 1 cut(s) | 142 |
| BmsI | GCATC | 2 cut(s) | 185, 226 |
| BmtI | GCTAGC | 1 cut(s) | 357 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| Bpu14I | TTCGAA | 1 cut(s) | 66 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 243, 273 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 248, 278 |
| BseBI | CCWGG | 1 cut(s) | 142 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 248, 278 |
| BseRI | GAGGAG | 2 cut(s) | 40, 235 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BsiSI | CCGG | 1 cut(s) | 42 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 248, 278 |
| Bsp119I | TTCGAA | 1 cut(s) | 66 |
| Bsp143I | GATC | 3 cut(s) | 3, 137, 295 |
| BspACI | CCGC | 2 cut(s) | 60, 279 |
| BspHI | TCATGA | 1 cut(s) | 298 |
| BspLI | GGNNCC | 1 cut(s) | 139 |
| BspOI | GCTAGC | 1 cut(s) | 357 |
| BspPI | GGATC | 2 cut(s) | 132, 145 |
| BspT104I | TTCGAA | 1 cut(s) | 66 |
| BspTI | CTTAAG | 1 cut(s) | 400 |
| BssMI | GATC | 3 cut(s) | 3, 137, 295 |
| Bst2UI | CCWGG | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| BstAFI | CTTAAG | 1 cut(s) | 400 |
| BstBI | TTCGAA | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 355 |
| BstDEI | CTNAG | 2 cut(s) | 287, 312 |
| BstKTI | GATC | 3 cut(s) | 6, 140, 298 |
| BstMBI | GATC | 3 cut(s) | 3, 137, 295 |
| BstNI | CCWGG | 1 cut(s) | 142 |
| BstNSI | RCATGY | 2 cut(s) | 307, 413 |
| BstSCI | CCNGG | 1 cut(s) | 140 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| BstX2I | RGATCY | 1 cut(s) | 137 |
| BstYI | RGATCY | 1 cut(s) | 137 |
| BtsI | GCAGTG | 1 cut(s) | 298 |
| BtsIMutI | CAGTG | 1 cut(s) | 298 |
| Cac8I | GCNNGC | 1 cut(s) | 355 |
| CciI | TCATGA | 1 cut(s) | 298 |
| Csp6I | GTAC | 1 cut(s) | 407 |
| CviAII | CATG | 4 cut(s) | 185, 299, 304, 410 |
| CviJI | RGCY | 6 cut(s) | 32, 101, 145, 224, 254, 319 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 101, 145, 224, 254, 319 |
| CviQI | GTAC | 1 cut(s) | 407 |
| DdeI | CTNAG | 2 cut(s) | 287, 312 |
| DpnI | GATC | 3 cut(s) | 5, 139, 297 |
| DpnII | GATC | 3 cut(s) | 3, 137, 295 |
| DraI | TTTAAA | 1 cut(s) | 342 |
| EciI | GGCGGA | 1 cut(s) | 294 |
| EcoRI | GAATTC | 1 cut(s) | 202 |
| EcoRII | CCWGG | 1 cut(s) | 140 |
| FaeI | CATG | 4 cut(s) | 188, 302, 307, 413 |
| FaiI | YATR | 6 cut(s) | 186, 300, 305, 351, 390, 411 |
| FatI | CATG | 4 cut(s) | 184, 298, 303, 409 |
| FbaI | TGATCA | 1 cut(s) | 295 |
| FblI | GTMKAC | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| FspBI | CTAG | 2 cut(s) | 48, 354 |
| GluI | GCNGC | 1 cut(s) | 225 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HapII | CCGG | 1 cut(s) | 42 |
| Hin1II | CATG | 4 cut(s) | 188, 302, 307, 413 |
| HpaII | CCGG | 1 cut(s) | 42 |
| HphI | GGTGA | 1 cut(s) | 211 |
| Hpy166II | GTNNAC | 1 cut(s) | 17 |
| Hpy188I | TCNGA | 1 cut(s) | 105 |
| Hpy188III | TCNNGA | 3 cut(s) | 135, 249, 299 |
| Hpy8I | GTNNAC | 1 cut(s) | 17 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4IV | ACGT | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 2 cut(s) | 287, 312 |
| HpySE526I | ACGT | 1 cut(s) | 86 |
| Hsp92II | CATG | 4 cut(s) | 188, 302, 307, 413 |
| Ksp22I | TGATCA | 1 cut(s) | 295 |
| Kzo9I | GATC | 3 cut(s) | 3, 137, 295 |
| LmnI | GCTCC | 2 cut(s) | 244, 251 |
| LpnPI | CCDG | 5 cut(s) | 55, 120, 127, 154, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| LweI | GCATC | 2 cut(s) | 185, 226 |
| MaeI | CTAG | 2 cut(s) | 48, 354 |
| MaeII | ACGT | 1 cut(s) | 86 |
| MaeIII | GTNAC | 1 cut(s) | 8 |
| MalI | GATC | 3 cut(s) | 5, 139, 297 |
| MboI | GATC | 3 cut(s) | 3, 137, 295 |
| MflI | RGATCY | 1 cut(s) | 137 |
| MluCI | AATT | 3 cut(s) | 37, 202, 418 |
| MnlI | CCTC | 4 cut(s) | 18, 253, 256, 372 |
| MseI | TTAA | 4 cut(s) | 153, 192, 341, 401 |
| MspCI | CTTAAG | 1 cut(s) | 400 |
| MspI | CCGG | 1 cut(s) | 42 |
| MspR9I | CCNGG | 1 cut(s) | 142 |
| MvaI | CCWGG | 1 cut(s) | 142 |
| NdeII | GATC | 3 cut(s) | 3, 137, 295 |
| NheI | GCTAGC | 1 cut(s) | 353 |
| NlaIII | CATG | 4 cut(s) | 188, 302, 307, 413 |
| NlaIV | GGNNCC | 1 cut(s) | 139 |
| NspI | RCATGY | 2 cut(s) | 307, 413 |
| NspV | TTCGAA | 1 cut(s) | 66 |
| PagI | TCATGA | 1 cut(s) | 298 |
| PciI | ACATGT | 1 cut(s) | 409 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| PscI | ACATGT | 1 cut(s) | 409 |
| Psp6I | CCWGG | 1 cut(s) | 140 |
| PspGI | CCWGG | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 1 cut(s) | 139 |
| PsuI | RGATCY | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 408 |
| RsaNI | GTAC | 1 cut(s) | 407 |
| SaqAI | TTAA | 4 cut(s) | 153, 192, 341, 401 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 3 cut(s) | 3, 137, 295 |
| ScrFI | CCNGG | 1 cut(s) | 142 |
| SetI | ASST | 8 cut(s) | 34, 53, 89, 103, 110, 256, 336, 364 |
| SfaNI | GCATC | 2 cut(s) | 185, 226 |
| SfuI | TTCGAA | 1 cut(s) | 66 |
| SmlI | CTYRAG | 1 cut(s) | 400 |
| SmoI | CTYRAG | 1 cut(s) | 400 |
| Sse9I | AATT | 3 cut(s) | 37, 202, 418 |
| SsiI | CCGC | 2 cut(s) | 60, 279 |
| SspMI | CTAG | 2 cut(s) | 48, 354 |
| StyD4I | CCNGG | 1 cut(s) | 140 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TaiI | ACGT | 1 cut(s) | 89 |
| TaqI | TCGA | 1 cut(s) | 66 |
| TasI | AATT | 3 cut(s) | 37, 202, 418 |
| TatI | WGTACW | 1 cut(s) | 406 |
| Tru1I | TTAA | 4 cut(s) | 153, 192, 341, 401 |
| Tru9I | TTAA | 4 cut(s) | 153, 192, 341, 401 |
| TscAI | CASTG | 1 cut(s) | 298 |
| TseI | GCWGC | 1 cut(s) | 224 |
| TspRI | CASTG | 1 cut(s) | 298 |
| Vha464I | CTTAAG | 1 cut(s) | 400 |
| XapI | RAATTY | 1 cut(s) | 202 |
| XceI | RCATGY | 2 cut(s) | 307, 413 |
| XmiI | GTMKAC | 1 cut(s) | 16 |
| XspI | CTAG | 2 cut(s) | 48, 354 |