FvH4_7g04820

Protein ZINC INDUCED

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
5247959 .. 5258903
10945 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g04820.t2

Sequence Viewer

Length: 1476 bp
ATGGCTACTGGGGAGGAGGAGAACAGAGAGAACTTGTTGAAGAAGGTGTACTATGAAAACTGCCCAGGTTGTAAGGTGGAAGAGGAGAAGGCGTTGCAACGAGGTGTTCCTGTTCGAAAGCTCATGGCTATCTGGATGATCGTTCTCTCTTCTGCGCTGCCAATATCATCTCTGTTTCCGTTTCTTTATTTTATGATTAGGGATTTTCATATTGCCAAAAGGGAGGAAGATATTGGGTTCTATGCTGGCTATGTAGGGTCTTCATATATGCTTGGAAGAGCATTGACATCAGTTTTCTGGGGAATAGTGGCTGATCGCTATGGTCGAAAACCTGTCATAATAATAGGAACTATTGCAGTGGTTGTTTTCAATACTCTCTTTGGACTCAGTGTAAACTTTTGGATGGCTATTGCTACACGATTTCTTCTTGGAAGTTTAAATGGTTTGTTTGGACCAATAAAGGCATATGCAAGTGAAGTCTTTCGGGAAGAACACCAAGCGTTAGGGATGTCAACAGTTAGCACAGCATGGGGTATCGGATTGATCATTGGTCCAGCTTTGGGAGGATTCTTTGCCCAGCCAGCAGAGAAATATCCCACTATTTTTTCCCCAGACTCTATATTCGGGAGGTTTCCGTACTTCTTACCTTGCCTTTGTATATCGATTTTTGCAGTCGGAGTAACCATTGCATGTTTCTGGCTTCCGGAAACCTTACACAATCACAATGAAAATGCCAGATTACATGATGATTCCTTTGAAGCACTGGAGTCTTCATCCTGTGGGTCAGTTGCAAATGAAATGAAACCAAAAACTGAAGAACAAATACCTAAAGAAAACCTCATGAAGAATTGGCCTTTAATATCATCAATCATTGTTTATTGTGTTTTCTCACTCCATGACATGGCTTATTCGGAGATATTCTCATTATGGGTGGAGAGTCCTCGAAAGTTAGGGGGTTTGAGCTATACAACTGAGGATGTCGGTGAAATTCTAGCAGTCTCAGGTCTTGGTCTTTTTGTCTTTCAAACTACTCTGTACCCGTCTGTGGAAAAGATGCTTGGTCCTATAAGAATTGCTCGCATTGGAGGGGTTTTGACTATACCTCTTTTGTCAAGCTACCCCTTTATAGCATTGTTGTCTGGACTTTCCCTCTCCGTGCTGTTAAATATTGCATCTCTGCTGAAAAATGTCATATCTATCATGATCGTCACTGGGCTTTTCATTCTCCAAAACAGAGCTGTGGACCAACGTCAACGAGGTGCTGCTAATGGAATTTCTATGACTGCAATGTCGCTGTTCAAGGCATTTGGTCCAGCTGGTGGTGGTGCAGTGTTTTCTTGGGCACAAAAACGCCTGGATGCTTCCATTCTACCTGGTATCCAGATGGTTTTTTTCATCTTGAATTTGGTGGAGTTACTTGCAGTTCTCATGACATTTAAGCCATTTCTTACTGTACGTGATGATAGACAGGGATGA

Protein Analysis

492

Amino Acids

54.21

Weight (kDa)

7.01

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 45 - 298 3.8e-31 Major Facilitator Superfamily
Sugar_tr PF00083 69 - 244 1.5e-14 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1288
AccB7I CCANNNNNTGG 2 cut(s) 901, 1319
AccIII TCCGGA 1 cut(s) 703
AcsI RAATTY 3 cut(s) 987, 1272, 1402
AcuI CTGAAG 1 cut(s) 834
AfaI GTAC 4 cut(s) 50, 638, 1037, 1455
AfiI CCNNNNNNNGG 4 cut(s) 560, 901, 1045, 1319
AgsI TTSAA 6 cut(s) 40, 370, 758, 1025, 1300, 1402
AjnI CCWGG 3 cut(s) 64, 1353, 1372
AjuI GAANNNNNNNTTGG 2 cut(s) 1041, 1073
AluBI AGCT 6 cut(s) 121, 557, 963, 1116, 1238, 1316
AluI AGCT 6 cut(s) 121, 557, 963, 1116, 1238, 1316
Alw26I GTCTC 1 cut(s) 1003
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 1 cut(s) 851
ApeKI GCWGC 2 cut(s) 157, 1262
ApoI RAATTY 3 cut(s) 987, 1272, 1402
ArsI GACNNNNNNTTYG 2 cut(s) 605, 637
Asp700I GAANNNNTTC 1 cut(s) 480
AspLEI GCGC 1 cut(s) 157
AspS9I GGNCC 5 cut(s) 452, 551, 1061, 1243, 1310
AsuHPI GGTGA 1 cut(s) 995
AsuII TTCGAA 1 cut(s) 115
AvaII GGWCC 5 cut(s) 452, 551, 1061, 1243, 1310
BaeGI GKGCMC 1 cut(s) 1345
BarI GAAGNNNNNNTAC 4 cut(s) 32, 64, 807, 839
BbsI GAAGAC 2 cut(s) 252, 762
BbvI GCAGC 2 cut(s) 144, 1249
BccI CCATC 2 cut(s) 397, 1378
BciT130I CCWGG 3 cut(s) 66, 1355, 1374
BciVI GTATCC 1 cut(s) 1388
BclI TGATCA 1 cut(s) 543
BcoDI GTCTC 1 cut(s) 1003
BfaI CTAG 1 cut(s) 992
BfuI GTATCC 1 cut(s) 1388
BisI GCNGC 2 cut(s) 158, 1263
BlsI GCNGC 2 cut(s) 159, 1264
Bme1390I CCNGG 3 cut(s) 66, 1355, 1374
Bme18I GGWCC 5 cut(s) 452, 551, 1061, 1243, 1310
BmgT120I GGNCC 5 cut(s) 452, 551, 1061, 1243, 1310
BmrFI CCNGG 3 cut(s) 66, 1355, 1374
BmrI ACTGGG 2 cut(s) 18, 1221
BmsI GCATC 3 cut(s) 1044, 1181, 1348
BmuI ACTGGG 2 cut(s) 18, 1221
BoxI GACNNNNGTC 1 cut(s) 1248
BpiI GAAGAC 2 cut(s) 252, 762
BplI GAGNNNNNCTC 2 cut(s) 905, 937
BpmI CTGGAG 1 cut(s) 785
Bpu14I TTCGAA 1 cut(s) 115
Bsa29I ATCGAT 1 cut(s) 662
BsaAI YACGTR 1 cut(s) 1457
BsaJI CCNNGG 1 cut(s) 64
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 4 cut(s) 560, 901, 1045, 1319
Bse1I ACTGG 3 cut(s) 13, 768, 1216
Bse3DI GCAATG 2 cut(s) 684, 1293
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 3 cut(s) 66, 1355, 1374
BseCI ATCGAT 1 cut(s) 662
BseDI CCNNGG 1 cut(s) 64
BseGI GGATG 6 cut(s) 141, 408, 513, 773, 982, 1363
BseLI CCNNNNNNNGG 4 cut(s) 560, 901, 1045, 1319
BseMI GCAATG 2 cut(s) 684, 1293
BseMII CTCAG 3 cut(s) 400, 963, 1014
BseNI ACTGG 3 cut(s) 13, 768, 1216
BseRI GAGGAG 3 cut(s) 29, 32, 98
BseSI GKGCMC 1 cut(s) 1345
BseXI GCAGC 2 cut(s) 144, 1249
BseYI CCCAGC 1 cut(s) 576
BsgI GTGCAG 1 cut(s) 1347
BshFI GGCC 1 cut(s) 853
BshVI ATCGAT 1 cut(s) 662
BsiSI CCGG 1 cut(s) 704
BslI CCNNNNNNNGG 4 cut(s) 560, 901, 1045, 1319
BsmAI GTCTC 1 cut(s) 1003
BsnI GGCC 1 cut(s) 853
Bsp119I TTCGAA 1 cut(s) 115
Bsp1286I GDGCHC 1 cut(s) 1345
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 4 cut(s) 138, 313, 543, 1203
BspANI GGCC 1 cut(s) 853
BspCNI CTCAG 3 cut(s) 399, 964, 1013
BspDI ATCGAT 1 cut(s) 662
BspEI TCCGGA 1 cut(s) 703
BspHI TCATGA 3 cut(s) 840, 1200, 1428
BspQI GCTCTTC 1 cut(s) 271
BspT104I TTCGAA 1 cut(s) 115
BsrDI GCAATG 2 cut(s) 684, 1293
BsrI ACTGG 3 cut(s) 13, 768, 1216
BssECI CCNNGG 1 cut(s) 64
BssMI GATC 4 cut(s) 138, 313, 543, 1203
Bst2UI CCWGG 3 cut(s) 66, 1355, 1374
Bst4CI ACNGT 2 cut(s) 517, 1453
Bst6I CTCTTC 3 cut(s) 75, 154, 271
BstBAI YACGTR 1 cut(s) 1457
BstBI TTCGAA 1 cut(s) 115
BstC8I GCNNGC 3 cut(s) 247, 582, 1078
BstDEI CTNAG 3 cut(s) 386, 972, 1000
BstF5I GGATG 6 cut(s) 141, 408, 513, 773, 982, 1363
BstHHI GCGC 1 cut(s) 157
BstKTI GATC 4 cut(s) 141, 316, 546, 1206
BstMAI GTCTC 1 cut(s) 1003
BstMBI GATC 4 cut(s) 138, 313, 543, 1203
BstMWI GCNNNNNNNGC 1 cut(s) 581
BstNI CCWGG 3 cut(s) 66, 1355, 1374
BstNSI RCATGY 1 cut(s) 693
BstPAI GACNNNNGTC 1 cut(s) 1248
BstSCI CCNGG 3 cut(s) 64, 1353, 1372
BstSLI GKGCMC 1 cut(s) 1345
BstV1I GCAGC 2 cut(s) 144, 1249
BstV2I GAAGAC 2 cut(s) 252, 762
Bsu15I ATCGAT 1 cut(s) 662
BsuI GTATCC 1 cut(s) 1388
BsuRI GGCC 1 cut(s) 853
BsuTUI ATCGAT 1 cut(s) 662
BtsCI GGATG 6 cut(s) 141, 408, 513, 773, 982, 1363
BtsI GCAGTG 2 cut(s) 363, 1335
BtsIMutI CAGTG 5 cut(s) 363, 394, 761, 1209, 1335
Cac8I GCNNGC 3 cut(s) 247, 582, 1078
CciI TCATGA 3 cut(s) 840, 1200, 1428
CfoI GCGC 1 cut(s) 157
Cfr13I GGNCC 5 cut(s) 452, 551, 1061, 1243, 1310
ClaI ATCGAT 1 cut(s) 662
CsiI ACCWGGT 1 cut(s) 1372
Csp6I GTAC 4 cut(s) 49, 637, 1036, 1454
CviAII CATG 9 cut(s) 124, 528, 690, 743, 841, 896, 901, 1201, 1429
CviQI GTAC 4 cut(s) 49, 637, 1036, 1454
DdeI CTNAG 3 cut(s) 386, 972, 1000
DpnI GATC 4 cut(s) 140, 315, 545, 1205
DpnII GATC 4 cut(s) 138, 313, 543, 1203
DraI TTTAAA 1 cut(s) 438
DrdI GACNNNNNNGTC 1 cut(s) 1288
DseDI GACNNNNNNGTC 1 cut(s) 1288
Eam1104I CTCTTC 3 cut(s) 75, 154, 271
EarI CTCTTC 3 cut(s) 75, 154, 271
Eco47I GGWCC 5 cut(s) 452, 551, 1061, 1243, 1310
Eco57I CTGAAG 1 cut(s) 834
EcoRII CCWGG 3 cut(s) 64, 1353, 1372
FaeI CATG 9 cut(s) 127, 531, 693, 746, 844, 899, 904, 1204, 1432
FatI CATG 9 cut(s) 123, 527, 689, 742, 840, 895, 900, 1200, 1428
FauNDI CATATG 1 cut(s) 466
FbaI TGATCA 1 cut(s) 543
Fnu4HI GCNGC 2 cut(s) 158, 1263
FokI GGATG 6 cut(s) 148, 415, 520, 760, 989, 1370
Fsp4HI GCNGC 2 cut(s) 158, 1263
FspBI CTAG 1 cut(s) 992
GlaI GCGC 1 cut(s) 156
GluI GCNGC 2 cut(s) 158, 1263
GsaI CCCAGC 1 cut(s) 580
GsuI CTGGAG 1 cut(s) 785
HaeIII GGCC 1 cut(s) 853
HapII CCGG 1 cut(s) 704
HhaI GCGC 1 cut(s) 157
Hin1II CATG 9 cut(s) 127, 531, 693, 746, 844, 899, 904, 1204, 1432
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HincII GTYRAC 2 cut(s) 513, 1253
HindII GTYRAC 2 cut(s) 513, 1253
HinfI GANTC 6 cut(s) 384, 567, 614, 749, 767, 937
HpaII CCGG 1 cut(s) 704
HphI GGTGA 1 cut(s) 995
Hpy166II GTNNAC 5 cut(s) 49, 394, 513, 1243, 1253
Hpy188I TCNGA 3 cut(s) 539, 677, 913
Hpy8I GTNNAC 5 cut(s) 49, 394, 513, 1243, 1253
HpyAV CCTTC 2 cut(s) 37, 82
HpyCH4III ACNGT 2 cut(s) 517, 1453
HpyCH4IV ACGT 2 cut(s) 1249, 1456
HpyF10VI GCNNNNNNNGC 1 cut(s) 581
HpyF3I CTNAG 3 cut(s) 386, 972, 1000
HpySE526I ACGT 2 cut(s) 1249, 1456
Hsp92II CATG 9 cut(s) 127, 531, 693, 746, 844, 899, 904, 1204, 1432
HspAI GCGC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 703
Ksp22I TGATCA 1 cut(s) 543
Kzo9I GATC 4 cut(s) 138, 313, 543, 1203
LguI GCTCTTC 1 cut(s) 271
Lsp1109I GCAGC 2 cut(s) 144, 1249
LweI GCATC 3 cut(s) 1044, 1181, 1348
MabI ACCWGGT 1 cut(s) 1372
MaeI CTAG 1 cut(s) 992
MaeII ACGT 2 cut(s) 1249, 1456
MaeIII GTNAC 3 cut(s) 679, 1207, 1413
MalI GATC 4 cut(s) 140, 315, 545, 1205
MboI GATC 4 cut(s) 138, 313, 543, 1203
MhlI GDGCHC 1 cut(s) 1345
MluCI AATT 5 cut(s) 847, 987, 1071, 1272, 1402
MlyI GAGTC 4 cut(s) 378, 608, 776, 946
MmeI TCCRAC 1 cut(s) 655
MroI TCCGGA 1 cut(s) 703
MroXI GAANNNNTTC 1 cut(s) 480
MseI TTAA 4 cut(s) 437, 857, 1163, 1437
MspA1I CMGCKG 1 cut(s) 1316
MspI CCGG 1 cut(s) 704
MspR9I CCNGG 3 cut(s) 66, 1355, 1374
MvaI CCWGG 3 cut(s) 66, 1355, 1374
MwoI GCNNNNNNNGC 1 cut(s) 581
NdeI CATATG 1 cut(s) 466
NdeII GATC 4 cut(s) 138, 313, 543, 1203
NlaIII CATG 9 cut(s) 127, 531, 693, 746, 844, 899, 904, 1204, 1432
NmuCI GTSAC 1 cut(s) 1207
NspI RCATGY 1 cut(s) 693
NspV TTCGAA 1 cut(s) 115
PagI TCATGA 3 cut(s) 840, 1200, 1428
PciSI GCTCTTC 1 cut(s) 271
PcsI WCGNNNNNNNCGW 1 cut(s) 322
PdmI GAANNNNTTC 1 cut(s) 480
PfeI GAWTC 2 cut(s) 567, 749
PflMI CCANNNNNTGG 2 cut(s) 901, 1319
PkrI GCNGC 2 cut(s) 159, 1264
PleI GAGTC 4 cut(s) 378, 608, 775, 945
PpsI GAGTC 4 cut(s) 378, 608, 775, 945
Ppu21I YACGTR 1 cut(s) 1457
PshAI GACNNNNGTC 1 cut(s) 1248
Psp6I CCWGG 3 cut(s) 64, 1353, 1372
PspFI CCCAGC 1 cut(s) 576
PspGI CCWGG 3 cut(s) 64, 1353, 1372
PspPI GGNCC 5 cut(s) 452, 551, 1061, 1243, 1310
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 4 cut(s) 50, 638, 1037, 1455
RsaNI GTAC 4 cut(s) 49, 637, 1036, 1454
SapI GCTCTTC 1 cut(s) 271
SaqAI TTAA 4 cut(s) 437, 857, 1163, 1437
SatI GCNGC 2 cut(s) 158, 1263
Sau3AI GATC 4 cut(s) 138, 313, 543, 1203
Sau96I GGNCC 5 cut(s) 452, 551, 1061, 1243, 1310
SchI GAGTC 4 cut(s) 378, 608, 776, 946
ScrFI CCNGG 3 cut(s) 66, 1355, 1374
SduI GDGCHC 1 cut(s) 1345
SexAI ACCWGGT 1 cut(s) 1372
SfaNI GCATC 3 cut(s) 1044, 1181, 1348
SfuI TTCGAA 1 cut(s) 115
SinI GGWCC 5 cut(s) 452, 551, 1061, 1243, 1310
Sse9I AATT 5 cut(s) 847, 987, 1071, 1272, 1402
SspI AATATT 1 cut(s) 1168
SspMI CTAG 1 cut(s) 992
StyD4I CCNGG 3 cut(s) 64, 1353, 1372
TaaI ACNGT 2 cut(s) 517, 1453
TaiI ACGT 2 cut(s) 1252, 1459
TaqI TCGA 4 cut(s) 115, 325, 662, 943
TasI AATT 5 cut(s) 847, 987, 1071, 1272, 1402
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 2 cut(s) 567, 749
Tru1I TTAA 4 cut(s) 437, 857, 1163, 1437
Tru9I TTAA 4 cut(s) 437, 857, 1163, 1437
TscAI CASTG 5 cut(s) 363, 394, 768, 1216, 1335
TseFI GTSAC 1 cut(s) 1207
TseI GCWGC 2 cut(s) 157, 1262
Tsp45I GTSAC 1 cut(s) 1207
TspGWI ACGGA 3 cut(s) 168, 624, 1144
TspRI CASTG 5 cut(s) 363, 394, 768, 1216, 1335
Van91I CCANNNNNTGG 2 cut(s) 901, 1319
VpaK11BI GGWCC 5 cut(s) 452, 551, 1061, 1243, 1310
XapI RAATTY 3 cut(s) 987, 1272, 1402
XceI RCATGY 1 cut(s) 693
XmnI GAANNNNTTC 1 cut(s) 480
XspI CTAG 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.