RLG00000029813

Protein ZINC INDUCED

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
49597151 .. 49607210
10060 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029813

Sequence Viewer

Length: 1464 bp
ATGGCGGCAGAGAATGAGGAGCACAGGGAGAGCTTGTTGAAGAAGGTATACTATGAAAACTGCCCGGGTTGTAAGGTGGAAGAGGAGAAGGCGTTGCAACGAGGCATTCCTGTTCGAAAGCTTGTGGCGATCTGGGGGATCGTGCTCTCTGCTGCGCTGCCAATATCATCTCTATTTCCATTTCTTTATTTTATGATTAGGGATTTTCATATTGCAAAAAGAGATGAAGATATTGGCTTCTATGCTGGGTATGTAGGGTCTTCGTACATGCTTGGAAGAGCACTGACTTCAGTTCCCTGGGGAATAGTGGCTGATCGCTATGGTCGAAAACCTGTCATAATAATAGGGACTATTGCAGTGGTTGTTTTCAATACTCTCTTTGGACTCAGTGTAAATTTTTGGATGGCCATCATTACAAGATTCCTTCTCGGAAGTTTAAATGGTTTGCTTGGACCAATAAAGGCATATGCAAGTGAAGTCTTTCGGGAAGAACATCAAGCGTTAGGAATGTCAACAGTTAGCACGGCATGGGGTATTGGATTGATCATTGGCCCAGCTTTGGGAGGATTCTTTGCCCAGCCAGCAGAGAAATATCCCACTATATTTTCTGCAGATTCTGTATTTGGGAGGTTTCCATACTTCTTACCTTGCCTTTGTATATCTCTTTTTGCACTTGGAATAACCGTTGCATGTTTCTGGCTTCCGGAAACTTTACACAATCACAATGAAAATGCCAGATTACATGATGATTCCTTTGAAGCATTGGAAACAGCATCATGTGGGTCAGATGCAAATGAAATAAAACAAAAAACTGAAGAACAAATACCTAAACACAGCCTCATGAAGAACTGGCCGTTAATATCATCAATCATTGTTTATTGTGTTTTCTCACTCCATGACATGGCTTATACAGAGATATTCTCATTATGGGCTGAGAGTCCTCGAAAGTTAGGGGGTTTGAGCTATACAACTGAGGATGTTGGTGAAGTTCTTGCAATCTCAGGTTTTGGTCTTTTTGTCTTTCAAACTACGCTGTACCCGTATGTGGAAAAGATGCTGGGTCCTGTAAAAATTGCTCGCATTGGAGGGGTTTTGACTATACCTCTTTTGTCAAGCTACCACTTTATAGCATTGTTATCCGGGTTCTCCCTCTCCGTGCTGTTAAATATTGCATCTCTGCTGAAAAATGTCATGTCTATCATAATTGTCACTGGCCTGTTCATTCTCCAAAACAGAGCTGTGGAGCAACATCAAAGAGGTGCTGCTAATGGAATTGCTATGACTGCAATGTCTCTGTTCAAGGCAGTTGGTCCAGCTGCTGGTGGTGCAGTCTGGAGTGATTCAATTATACTGTCTTATTTATGTATCTCGATGGTTTTCTTCATCTTGAATCTGGTGGAATTAATTGCAGTTCTCATGACATTTAAACCATTTCTTACTGTACCTGATGATAGACAGGGATGA

Protein Analysis

488

Amino Acids

53.64

Weight (kDa)

6.22

Isoelectric Point (pI)

35.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 45 - 438 3.6e-35 Major Facilitator Superfamily
Sugar_tr PF00083 69 - 274 6.2e-13 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1288
AccB7I CCANNNNNTGG 2 cut(s) 901, 1319
AccI GTMKAC 1 cut(s) 48
AccIII TCCGGA 1 cut(s) 703
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 146
AcoI YGGCCR 2 cut(s) 405, 851
AcsI RAATTY 1 cut(s) 394
AcuI CTGAAG 2 cut(s) 273, 834
AfaI GTAC 3 cut(s) 266, 1037, 1443
AfiI CCNNNNNNNGG 5 cut(s) 559, 560, 901, 1045, 1319
AgsI TTSAA 7 cut(s) 40, 370, 758, 1025, 1300, 1344, 1390
AjnI CCWGG 1 cut(s) 296
AluBI AGCT 7 cut(s) 33, 121, 557, 963, 1116, 1238, 1316
AluI AGCT 7 cut(s) 33, 121, 557, 963, 1116, 1238, 1316
Alw21I GWGCWC 3 cut(s) 24, 147, 283
Alw26I GTCTC 1 cut(s) 1296
AlwI GGATC 1 cut(s) 146
AlwNI CAGNNNCTG 2 cut(s) 617, 1319
Ama87I CYCGRG 1 cut(s) 64
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 4 cut(s) 405, 550, 851, 1213
ApeKI GCWGC 4 cut(s) 152, 157, 1262, 1316
ApoI RAATTY 1 cut(s) 394
AseI ATTAAT 1 cut(s) 1403
Asp700I GAANNNNTTC 1 cut(s) 480
AspLEI GCGC 1 cut(s) 157
AspS9I GGNCC 4 cut(s) 452, 551, 1061, 1310
AsuC2I CCSGG 3 cut(s) 65, 66, 1141
AsuHPI GGTGA 1 cut(s) 995
AsuII TTCGAA 1 cut(s) 115
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 3 cut(s) 452, 1061, 1310
BalI TGGCCA 1 cut(s) 407
BarI GAAGNNNNNNTAC 4 cut(s) 32, 64, 807, 839
BbsI GAAGAC 1 cut(s) 252
Bbv12I GWGCWC 3 cut(s) 24, 147, 283
BbvI GCAGC 4 cut(s) 139, 144, 1249, 1303
BccI CCATC 3 cut(s) 397, 416, 1366
BceAI ACGGC 2 cut(s) 540, 838
BciT130I CCWGG 1 cut(s) 298
BclI TGATCA 1 cut(s) 543
BcnI CCSGG 3 cut(s) 65, 66, 1141
BcoDI GTCTC 1 cut(s) 1296
BfmI CTRYAG 1 cut(s) 609
BisI GCNGC 5 cut(s) 6, 153, 158, 1263, 1317
BlsI GCNGC 5 cut(s) 7, 154, 159, 1264, 1318
Bme1390I CCNGG 4 cut(s) 65, 66, 298, 1141
Bme18I GGWCC 3 cut(s) 452, 1061, 1310
BmeT110I CYCGRG 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 452, 551, 1061, 1310
BmiI GGNNCC 1 cut(s) 1062
BmrFI CCNGG 4 cut(s) 65, 66, 298, 1141
BmsI GCATC 4 cut(s) 778, 782, 1044, 1181
BpiI GAAGAC 1 cut(s) 252
BplI GAGNNNNNCTC 2 cut(s) 905, 937
BpmI CTGGAG 1 cut(s) 1354
Bpu14I TTCGAA 1 cut(s) 115
BpuMI CCSGG 3 cut(s) 65, 66, 1141
BsaBI GATNNNNATC 1 cut(s) 407
BsaJI CCNNGG 3 cut(s) 64, 296, 297
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 4 cut(s) 20, 50, 77, 107
Bsc4I CCNNNNNNNGG 5 cut(s) 559, 560, 901, 1045, 1319
Bse1I ACTGG 2 cut(s) 854, 1216
Bse3DI GCAATG 1 cut(s) 1293
Bse8I GATNNNNATC 1 cut(s) 407
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 1 cut(s) 298
BseDI CCNNGG 3 cut(s) 64, 296, 297
BseGI GGATG 2 cut(s) 408, 982
BseJI GATNNNNATC 1 cut(s) 407
BseLI CCNNNNNNNGG 5 cut(s) 559, 560, 901, 1045, 1319
BseMI GCAATG 1 cut(s) 1293
BseMII CTCAG 4 cut(s) 400, 924, 963, 1014
BseNI ACTGG 2 cut(s) 854, 1216
BseRI GAGGAG 2 cut(s) 32, 98
BseXI GCAGC 4 cut(s) 139, 144, 1249, 1303
BseYI CCCAGC 4 cut(s) 245, 553, 576, 1057
BsgI GTGCAG 1 cut(s) 1347
BshFI GGCC 4 cut(s) 407, 552, 853, 1215
BsiHKAI GWGCWC 3 cut(s) 24, 147, 283
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 3 cut(s) 65, 704, 1140
BslFI GGGAC 1 cut(s) 361
BslI CCNNNNNNNGG 5 cut(s) 559, 560, 901, 1045, 1319
BsmAI GTCTC 1 cut(s) 1296
BsmFI GGGAC 1 cut(s) 361
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 4 cut(s) 407, 552, 853, 1215
BsoBI CYCGRG 1 cut(s) 64
Bsp119I TTCGAA 1 cut(s) 115
Bsp1286I GDGCHC 3 cut(s) 24, 147, 283
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 4 cut(s) 129, 138, 313, 543
BspACI CCGC 1 cut(s) 5
BspANI GGCC 4 cut(s) 407, 552, 853, 1215
BspCNI CTCAG 4 cut(s) 399, 925, 964, 1013
BspEI TCCGGA 1 cut(s) 703
BspHI TCATGA 2 cut(s) 840, 1416
BspLI GGNNCC 1 cut(s) 1062
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 1 cut(s) 146
BspQI GCTCTTC 1 cut(s) 271
BspT104I TTCGAA 1 cut(s) 115
BsrDI GCAATG 1 cut(s) 1293
BsrI ACTGG 2 cut(s) 854, 1216
BssECI CCNNGG 3 cut(s) 64, 296, 297
BssMI GATC 4 cut(s) 129, 138, 313, 543
BssNAI GTATAC 1 cut(s) 49
Bst1107I GTATAC 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 298
Bst4CI ACNGT 4 cut(s) 517, 685, 1353, 1441
Bst6I CTCTTC 2 cut(s) 75, 271
BstBI TTCGAA 1 cut(s) 115
BstC8I GCNNGC 2 cut(s) 582, 1078
BstDEI CTNAG 4 cut(s) 386, 933, 972, 1000
BstF5I GGATG 2 cut(s) 408, 982
BstHHI GCGC 1 cut(s) 157
BstKTI GATC 4 cut(s) 132, 141, 316, 546
BstMAI GTCTC 1 cut(s) 1296
BstMBI GATC 4 cut(s) 129, 138, 313, 543
BstMWI GCNNNNNNNGC 3 cut(s) 581, 1283, 1325
BstNI CCWGG 1 cut(s) 298
BstNSI RCATGY 2 cut(s) 271, 693
BstSCI CCNGG 4 cut(s) 63, 64, 296, 1139
BstSFI CTRYAG 1 cut(s) 609
BstV1I GCAGC 4 cut(s) 139, 144, 1249, 1303
BstV2I GAAGAC 1 cut(s) 252
BstZ17I GTATAC 1 cut(s) 49
BsuRI GGCC 4 cut(s) 407, 552, 853, 1215
BtsCI GGATG 2 cut(s) 408, 982
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 4 cut(s) 281, 363, 394, 1209
Cac8I GCNNGC 2 cut(s) 582, 1078
CaiI CAGNNNCTG 2 cut(s) 617, 1319
CciI TCATGA 2 cut(s) 840, 1416
CfoI GCGC 1 cut(s) 157
Cfr13I GGNCC 4 cut(s) 452, 551, 1061, 1310
Cfr9I CCCGGG 1 cut(s) 64
Csp6I GTAC 3 cut(s) 265, 1036, 1442
CviQI GTAC 3 cut(s) 265, 1036, 1442
DdeI CTNAG 4 cut(s) 386, 933, 972, 1000
DpnI GATC 4 cut(s) 131, 140, 315, 545
DpnII GATC 4 cut(s) 129, 138, 313, 543
DraI TTTAAA 2 cut(s) 438, 1426
DrdI GACNNNNNNGTC 1 cut(s) 1288
DseDI GACNNNNNNGTC 1 cut(s) 1288
EaeI YGGCCR 2 cut(s) 405, 851
Eam1104I CTCTTC 2 cut(s) 75, 271
EarI CTCTTC 2 cut(s) 75, 271
Eco47I GGWCC 3 cut(s) 452, 1061, 1310
Eco57I CTGAAG 2 cut(s) 273, 834
Eco88I CYCGRG 1 cut(s) 64
EcoO109I RGGNCCY 1 cut(s) 1061
EcoRII CCWGG 1 cut(s) 296
FaqI GGGAC 1 cut(s) 361
FauNDI CATATG 1 cut(s) 466
FbaI TGATCA 1 cut(s) 543
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 6, 153, 158, 1263, 1317
FokI GGATG 2 cut(s) 415, 989
Fsp4HI GCNGC 5 cut(s) 6, 153, 158, 1263, 1317
GlaI GCGC 1 cut(s) 156
GluI GCNGC 5 cut(s) 6, 153, 158, 1263, 1317
GsaI CCCAGC 4 cut(s) 249, 557, 580, 1061
GsuI CTGGAG 1 cut(s) 1354
HaeIII GGCC 4 cut(s) 407, 552, 853, 1215
HapII CCGG 3 cut(s) 65, 704, 1140
HhaI GCGC 1 cut(s) 157
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HindIII AAGCTT 1 cut(s) 119
HinfI GANTC 8 cut(s) 384, 420, 567, 614, 749, 937, 1340, 1390
HpaII CCGG 3 cut(s) 65, 704, 1140
HphI GGTGA 1 cut(s) 995
Hpy166II GTNNAC 2 cut(s) 49, 513
Hpy188I TCNGA 2 cut(s) 431, 787
Hpy188III TCNNGA 7 cut(s) 485, 704, 841, 1333, 1369, 1387, 1417
Hpy8I GTNNAC 2 cut(s) 49, 513
HpyAV CCTTC 3 cut(s) 37, 82, 434
HpyCH4III ACNGT 4 cut(s) 517, 685, 1353, 1441
HpyF10VI GCNNNNNNNGC 3 cut(s) 581, 1283, 1325
HpyF3I CTNAG 4 cut(s) 386, 933, 972, 1000
HspAI GCGC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 703
Ksp22I TGATCA 1 cut(s) 543
Kzo9I GATC 4 cut(s) 129, 138, 313, 543
LguI GCTCTTC 1 cut(s) 271
LmnI GCTCC 2 cut(s) 19, 1243
Lsp1109I GCAGC 4 cut(s) 139, 144, 1249, 1303
LweI GCATC 4 cut(s) 778, 782, 1044, 1181
MaeIII GTNAC 1 cut(s) 1207
MalI GATC 4 cut(s) 131, 140, 315, 545
MboI GATC 4 cut(s) 129, 138, 313, 543
MboII GAAGA 9 cut(s) 52, 92, 239, 252, 288, 500, 827, 856, 1372
MhlI GDGCHC 3 cut(s) 24, 147, 283
MlsI TGGCCA 1 cut(s) 407
MluCI AATT 7 cut(s) 394, 1071, 1203, 1272, 1344, 1400, 1404
MluNI TGGCCA 1 cut(s) 407
MlyI GAGTC 2 cut(s) 378, 946
Mox20I TGGCCA 1 cut(s) 407
MroI TCCGGA 1 cut(s) 703
MroXI GAANNNNTTC 1 cut(s) 480
MscI TGGCCA 1 cut(s) 407
MseI TTAA 5 cut(s) 437, 857, 1163, 1403, 1425
Msp20I TGGCCA 1 cut(s) 407
MspA1I CMGCKG 1 cut(s) 1316
MspI CCGG 3 cut(s) 65, 704, 1140
MspR9I CCNGG 4 cut(s) 65, 66, 298, 1141
Mva1269I GAATGC 1 cut(s) 105
MvaI CCWGG 1 cut(s) 298
MwoI GCNNNNNNNGC 3 cut(s) 581, 1283, 1325
NciI CCSGG 3 cut(s) 65, 66, 1141
NdeI CATATG 1 cut(s) 466
NdeII GATC 4 cut(s) 129, 138, 313, 543
NlaIV GGNNCC 1 cut(s) 1062
NmuCI GTSAC 1 cut(s) 1207
NspI RCATGY 2 cut(s) 271, 693
NspV TTCGAA 1 cut(s) 115
PagI TCATGA 2 cut(s) 840, 1416
PasI CCCWGGG 1 cut(s) 297
PciSI GCTCTTC 1 cut(s) 271
PcsI WCGNNNNNNNCGW 2 cut(s) 322, 1037
PctI GAATGC 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 480
PfeI GAWTC 6 cut(s) 420, 567, 614, 749, 1340, 1390
PflMI CCANNNNNTGG 2 cut(s) 901, 1319
PkrI GCNGC 5 cut(s) 7, 154, 159, 1264, 1318
PleI GAGTC 2 cut(s) 378, 945
PpsI GAGTC 2 cut(s) 378, 945
PpuMI RGGWCCY 1 cut(s) 1061
PshBI ATTAAT 1 cut(s) 1403
Psp5II RGGWCCY 1 cut(s) 1061
Psp6I CCWGG 1 cut(s) 296
PspFI CCCAGC 4 cut(s) 245, 553, 576, 1057
PspGI CCWGG 1 cut(s) 296
PspN4I GGNNCC 1 cut(s) 1062
PspPI GGNCC 4 cut(s) 452, 551, 1061, 1310
PspPPI RGGWCCY 1 cut(s) 1061
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 2 cut(s) 617, 1319
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 3 cut(s) 266, 1037, 1443
RsaNI GTAC 3 cut(s) 265, 1036, 1442
SapI GCTCTTC 1 cut(s) 271
SaqAI TTAA 5 cut(s) 437, 857, 1163, 1403, 1425
SatI GCNGC 5 cut(s) 6, 153, 158, 1263, 1317
Sau3AI GATC 4 cut(s) 129, 138, 313, 543
Sau96I GGNCC 4 cut(s) 452, 551, 1061, 1310
SchI GAGTC 2 cut(s) 378, 946
ScrFI CCNGG 4 cut(s) 65, 66, 298, 1141
SduI GDGCHC 3 cut(s) 24, 147, 283
SfaNI GCATC 4 cut(s) 778, 782, 1044, 1181
SfcI CTRYAG 1 cut(s) 609
SfuI TTCGAA 1 cut(s) 115
SinI GGWCC 3 cut(s) 452, 1061, 1310
SmaI CCCGGG 1 cut(s) 66
Sse9I AATT 7 cut(s) 394, 1071, 1203, 1272, 1344, 1400, 1404
SsiI CCGC 1 cut(s) 5
SspI AATATT 1 cut(s) 1168
StyD4I CCNGG 4 cut(s) 63, 64, 296, 1139
TaaI ACNGT 4 cut(s) 517, 685, 1353, 1441
TaqI TCGA 4 cut(s) 115, 325, 943, 1370
TasI AATT 7 cut(s) 394, 1071, 1203, 1272, 1344, 1400, 1404
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 6 cut(s) 420, 567, 614, 749, 1340, 1390
Tru1I TTAA 5 cut(s) 437, 857, 1163, 1403, 1425
Tru9I TTAA 5 cut(s) 437, 857, 1163, 1403, 1425
TscAI CASTG 4 cut(s) 288, 363, 394, 1216
TseFI GTSAC 1 cut(s) 1207
TseI GCWGC 4 cut(s) 152, 157, 1262, 1316
Tsp45I GTSAC 1 cut(s) 1207
TspDTI ATGAA 8 cut(s) 69, 197, 240, 741, 810, 857, 1210, 1372
TspGWI ACGGA 1 cut(s) 1144
TspMI CCCGGG 1 cut(s) 64
TspRI CASTG 4 cut(s) 288, 363, 394, 1216
Van91I CCANNNNNTGG 2 cut(s) 901, 1319
VpaK11BI GGWCC 3 cut(s) 452, 1061, 1310
VspI ATTAAT 1 cut(s) 1403
XapI RAATTY 1 cut(s) 394
XceI RCATGY 2 cut(s) 271, 693
XmaI CCCGGG 1 cut(s) 64
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.