pycom07g04040

Protein ZINC INDUCED

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
3450743 .. 3455799
5057 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04040.4

Sequence Viewer

Length: 1452 bp
ATGGCTGAGGAGCGCAGAGAGACGCTGTTGAAGAAGGATTACTATGACGATTGTCCCGGCTGTGTGATGGAACAGCGCAAAGAGCTGCAGAGAGGCCCTCCTTTTAAAATGCTTGTTTCTATATGGATTATTGTTCTTTCAGCTTCGCTGCCAATATCATCTCTCTTTCCATTCCTTTATTTTATGATTAGGGATTTGCATATTGCTAAAAGAGAGGAAGACATTGGCTACTATGCTGGATATGTAGGGGCTTCATATATGATTGGCAGAGCTCTGACATCAATTTTTTGGGGAATGGTGGCTGATCGCTATGGTCGGAAACCTGTCATAATTATAGGGACTGTTGCAGTGGTTATTTTCAACACTCTATTCGGACTCAGTTTTAACTTTTGGATGGCCATTTCTACACGATTTCTTCTTGGAAGTTTGAATGGTTTACTTGGTCCGATTAAGGCATACGCAAGTGAAGCCTTCCGAGAAGAACACCAAGCTTTAGGCATGTCAACAGTTAGTGTAGCCTGGGGTATCGGATTGATCATTGGCCCAGCTTTGGGAGGTTTCTTGGCCCAGCCAGCAGACAAATTTCCAAGTATATTTTCCCAAAACTCTATATTTGGGAGGTTTCCGTATTTCTTGCCTTGCCTATGTATATCAGTATTTGCATTTGGAGTAGCCGTTGCTTCTTTCTGGCTTCCGGAAACTTTACACAAGCACGACAGAAAAGCTAGATTACACGATGATCCTTATGAAGCATTGGAAACTGCATCCGGTGGGTCTGATGCAAATGAAAAGCAAAATACTGAAGAACGAACACCTAAAGAAAACCTCTTCAAGAATTGGCCCTTAATGTCTTCAATCATTGTTTTTTCCATTTTCGCACTTCATGACATGGCTTATACAGAGATATTCTCATTATGGGCCGTAAGTCCTCGGAAGTTTGGGGGTTTGAGTTTTTCAACTGAGGACGTTGGTGTAGTTCTTGCAATTTCTGGTTTTGGTCTTTTTTTATTCCAAATTACTCTATATCCATACGTTGAAAGGCTTCTTGGTCCTGTTATGATTGCTCGCATTGGAGGGATTATATCCATACCTCTGTTGTCAAGTTACCCGTTTATAGCAATGTTGTCCGGGCTCTCCCTTTCCGCGCTGTTAAACTGTGCATCTGTGCTGAAGAATGTCTTATCCGTCACGATTGTGACTGGCCTGTCCATCCTTCAAAACAAAGCTGTGGACCAAAAACAAAGAGGTGCTGCAAACGGACTTGCTATGACAGCAATGTCAATGTTCAAGGCAATTGGTCCAGCTGGTGGCGGTGCATTGTTTTCTTGGGCACAAAAACGTCGGGATGCTGCTATCCTACCTGGAAGCCAGATGATATTCTTCATCTTGAATGTGGTCGAGGCAATCGCAGTTCTGATGACATTCAAGCCATTTCTTACTCTACATGAGTAG

Protein Analysis

484

Amino Acids

53.24

Weight (kDa)

8.65

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1204, 1276
AccB7I CCANNNNNTGG 1 cut(s) 1307
AccII CGCG 1 cut(s) 1145
AccIII TCCGGA 1 cut(s) 694
AciI CCGC 2 cut(s) 1143, 1311
AclWI GGATC 1 cut(s) 734
AcoI YGGCCR 1 cut(s) 396
AcsI RAATTY 1 cut(s) 581
AcuI CTGAAG 2 cut(s) 822, 1190
AfiI CCNNNNNNNGG 3 cut(s) 550, 551, 1307
AjnI CCWGG 2 cut(s) 518, 1360
AjuI GAANNNNNNNTTGG 4 cut(s) 580, 612, 1029, 1061
AleI CACNNNNGTG 1 cut(s) 1193
AluBI AGCT 8 cut(s) 85, 143, 272, 491, 548, 725, 1226, 1304
AluI AGCT 8 cut(s) 85, 143, 272, 491, 548, 725, 1226, 1304
Alw21I GWGCWC 1 cut(s) 274
Alw26I GTCTC 1 cut(s) 14
AlwI GGATC 1 cut(s) 734
Aor13HI TCCGGA 1 cut(s) 694
AoxI GGCC 7 cut(s) 94, 396, 541, 564, 839, 918, 1201
ApeKI GCWGC 4 cut(s) 85, 148, 1250, 1349
ApoI RAATTY 1 cut(s) 581
Asp700I GAANNNNTTC 1 cut(s) 1041
AspLEI GCGC 3 cut(s) 15, 78, 1147
AspS9I GGNCC 9 cut(s) 95, 443, 542, 565, 840, 918, 1049, 1231, 1298
AsuC2I CCSGG 2 cut(s) 57, 1129
AvaII GGWCC 4 cut(s) 443, 1049, 1231, 1298
BaeGI GKGCMC 1 cut(s) 1333
BalI TGGCCA 1 cut(s) 398
BanII GRGCYC 2 cut(s) 274, 1134
BarI GAAGNNNNNNTAC 2 cut(s) 23, 55
BbsI GAAGAC 2 cut(s) 225, 843
Bbv12I GWGCWC 1 cut(s) 274
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 4 cut(s) 72, 135, 1237, 1336
BccI CCATC 3 cut(s) 61, 388, 1217
BceAI ACGGC 2 cut(s) 659, 905
BciT130I CCWGG 2 cut(s) 520, 1362
BclI TGATCA 1 cut(s) 534
BcnI CCSGG 2 cut(s) 57, 1129
BcoDI GTCTC 1 cut(s) 14
BfaI CTAG 1 cut(s) 726
BfmI CTRYAG 1 cut(s) 86
BisI GCNGC 4 cut(s) 86, 149, 1251, 1350
BlsI GCNGC 4 cut(s) 87, 150, 1252, 1351
Bme1390I CCNGG 4 cut(s) 57, 520, 1129, 1362
Bme18I GGWCC 4 cut(s) 443, 1049, 1231, 1298
BmgT120I GGNCC 9 cut(s) 95, 443, 542, 565, 840, 918, 1049, 1231, 1298
BmrFI CCNGG 4 cut(s) 57, 520, 1129, 1362
BmsI GCATC 4 cut(s) 769, 773, 1169, 1336
BoxI GACNNNNGTC 1 cut(s) 51
BpiI GAAGAC 2 cut(s) 225, 843
BplI GAGNNNNNCTC 4 cut(s) 82, 114, 893, 925
Bpu10I CCTNAGC 1 cut(s) 6
BpuMI CCSGG 2 cut(s) 57, 1129
BsaJI CCNNGG 2 cut(s) 519, 929
BsaWI WCCGGW 2 cut(s) 694, 767
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bsc4I CCNNNNNNNGG 3 cut(s) 550, 551, 1307
Bse1I ACTGG 1 cut(s) 1204
Bse3DI GCAATG 2 cut(s) 1125, 1281
BseAI TCCGGA 1 cut(s) 694
BseBI CCWGG 2 cut(s) 520, 1362
BseDI CCNNGG 2 cut(s) 519, 929
BseGI GGATG 4 cut(s) 399, 764, 1209, 1351
BseLI CCNNNNNNNGG 3 cut(s) 550, 551, 1307
BseMI GCAATG 2 cut(s) 1125, 1281
BseMII CTCAG 2 cut(s) 391, 951
BseNI ACTGG 1 cut(s) 1204
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 1333
BseXI GCAGC 4 cut(s) 72, 135, 1237, 1336
BseYI CCCAGC 2 cut(s) 544, 567
Bsh1236I CGCG 1 cut(s) 1145
BshFI GGCC 7 cut(s) 96, 398, 543, 566, 841, 920, 1203
BsiHKAI GWGCWC 1 cut(s) 274
BsiSI CCGG 4 cut(s) 57, 695, 768, 1128
BslFI GGGAC 2 cut(s) 39, 352
BslI CCNNNNNNNGG 3 cut(s) 550, 551, 1307
BsmAI GTCTC 1 cut(s) 14
BsmBI CGTCTC 1 cut(s) 14
BsmFI GGGAC 2 cut(s) 39, 352
BsnI GGCC 7 cut(s) 96, 398, 543, 566, 841, 920, 1203
Bsp1286I GDGCHC 3 cut(s) 274, 1134, 1333
Bsp13I TCCGGA 1 cut(s) 694
Bsp143I GATC 3 cut(s) 304, 534, 739
BspACI CCGC 2 cut(s) 1143, 1311
BspANI GGCC 7 cut(s) 96, 398, 543, 566, 841, 920, 1203
BspCNI CTCAG 2 cut(s) 390, 952
BspEI TCCGGA 1 cut(s) 694
BspFNI CGCG 1 cut(s) 1145
BspHI TCATGA 1 cut(s) 883
BspMAI CTGCAG 1 cut(s) 90
BspPI GGATC 1 cut(s) 734
BsrDI GCAATG 2 cut(s) 1125, 1281
BsrI ACTGG 1 cut(s) 1204
BssECI CCNNGG 2 cut(s) 519, 929
BssMI GATC 3 cut(s) 304, 534, 739
Bst2UI CCWGG 2 cut(s) 520, 1362
Bst4CI ACNGT 3 cut(s) 343, 508, 1157
Bst6I CTCTTC 1 cut(s) 833
BstC8I GCNNGC 2 cut(s) 573, 1066
BstDEI CTNAG 3 cut(s) 6, 377, 960
BstF5I GGATG 4 cut(s) 399, 764, 1209, 1351
BstFNI CGCG 1 cut(s) 1145
BstHHI GCGC 3 cut(s) 15, 78, 1147
BstKTI GATC 3 cut(s) 307, 537, 742
BstMAI GTCTC 1 cut(s) 14
BstMBI GATC 3 cut(s) 304, 534, 739
BstMWI GCNNNNNNNGC 4 cut(s) 82, 467, 572, 1271
BstNI CCWGG 2 cut(s) 520, 1362
BstNSI RCATGY 1 cut(s) 502
BstPAI GACNNNNGTC 1 cut(s) 51
BstSCI CCNGG 4 cut(s) 55, 518, 1127, 1360
BstSFI CTRYAG 1 cut(s) 86
BstSLI GKGCMC 1 cut(s) 1333
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 4 cut(s) 72, 135, 1237, 1336
BstV2I GAAGAC 2 cut(s) 225, 843
BsuRI GGCC 7 cut(s) 96, 398, 543, 566, 841, 920, 1203
BtsCI GGATG 4 cut(s) 399, 764, 1209, 1351
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 1 cut(s) 354
Cac8I GCNNGC 2 cut(s) 573, 1066
CciI TCATGA 1 cut(s) 883
CfoI GCGC 3 cut(s) 15, 78, 1147
Cfr13I GGNCC 9 cut(s) 95, 443, 542, 565, 840, 918, 1049, 1231, 1298
CseI GACGC 1 cut(s) 31
CviAII CATG 4 cut(s) 499, 884, 889, 1445
DdeI CTNAG 3 cut(s) 6, 377, 960
DpnI GATC 3 cut(s) 306, 536, 741
DpnII GATC 3 cut(s) 304, 534, 739
DraI TTTAAA 1 cut(s) 106
DrdI GACNNNNNNGTC 2 cut(s) 1204, 1276
DseDI GACNNNNNNGTC 2 cut(s) 1204, 1276
EaeI YGGCCR 1 cut(s) 396
Eam1104I CTCTTC 1 cut(s) 833
EarI CTCTTC 1 cut(s) 833
Ecl136II GAGCTC 1 cut(s) 272
Eco24I GRGCYC 2 cut(s) 274, 1134
Eco47I GGWCC 4 cut(s) 443, 1049, 1231, 1298
Eco53kI GAGCTC 1 cut(s) 272
Eco57I CTGAAG 2 cut(s) 822, 1190
EcoICRI GAGCTC 1 cut(s) 272
EcoO109I RGGNCCY 1 cut(s) 95
EcoRII CCWGG 2 cut(s) 518, 1360
EcoT38I GRGCYC 2 cut(s) 274, 1134
Esp3I CGTCTC 1 cut(s) 14
FaeI CATG 4 cut(s) 502, 887, 892, 1448
FalI AAGNNNNNCTT 2 cut(s) 1163, 1195
FaqI GGGAC 2 cut(s) 39, 352
FatI CATG 4 cut(s) 498, 883, 888, 1444
FbaI TGATCA 1 cut(s) 534
Fnu4HI GCNGC 4 cut(s) 86, 149, 1251, 1350
FokI GGATG 4 cut(s) 406, 751, 1196, 1358
FriOI GRGCYC 2 cut(s) 274, 1134
Fsp4HI GCNGC 4 cut(s) 86, 149, 1251, 1350
FspBI CTAG 1 cut(s) 726
GlaI GCGC 3 cut(s) 14, 77, 1146
GluI GCNGC 4 cut(s) 86, 149, 1251, 1350
GsaI CCCAGC 2 cut(s) 548, 571
HaeIII GGCC 7 cut(s) 96, 398, 543, 566, 841, 920, 1203
HapII CCGG 4 cut(s) 57, 695, 768, 1128
HgaI GACGC 1 cut(s) 31
HhaI GCGC 3 cut(s) 15, 78, 1147
Hin1II CATG 4 cut(s) 502, 887, 892, 1448
Hin6I GCGC 3 cut(s) 13, 76, 1145
HinP1I GCGC 3 cut(s) 13, 76, 1145
HincII GTYRAC 1 cut(s) 504
HindII GTYRAC 1 cut(s) 504
HindIII AAGCTT 1 cut(s) 489
HinfI GANTC 1 cut(s) 375
HpaII CCGG 4 cut(s) 57, 695, 768, 1128
Hpy166II GTNNAC 3 cut(s) 437, 504, 1231
Hpy188I TCNGA 9 cut(s) 276, 318, 374, 447, 476, 530, 778, 933, 1416
Hpy188III TCNNGA 6 cut(s) 695, 832, 884, 1189, 1343, 1387
Hpy8I GTNNAC 3 cut(s) 437, 504, 1231
Hpy99I CGWCG 1 cut(s) 1344
HpyAV CCTTC 3 cut(s) 28, 481, 1223
HpyCH4III ACNGT 3 cut(s) 343, 508, 1157
HpyCH4IV ACGT 3 cut(s) 966, 1032, 1339
HpyF10VI GCNNNNNNNGC 4 cut(s) 82, 467, 572, 1271
HpyF3I CTNAG 3 cut(s) 6, 377, 960
HpySE526I ACGT 3 cut(s) 966, 1032, 1339
Hsp92II CATG 4 cut(s) 502, 887, 892, 1448
HspAI GCGC 3 cut(s) 13, 76, 1145
Kpn2I TCCGGA 1 cut(s) 694
Ksp22I TGATCA 1 cut(s) 534
Kzo9I GATC 3 cut(s) 304, 534, 739
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 4 cut(s) 72, 135, 1237, 1336
LweI GCATC 4 cut(s) 769, 773, 1169, 1336
MaeI CTAG 1 cut(s) 726
MaeII ACGT 3 cut(s) 966, 1032, 1339
MaeIII GTNAC 3 cut(s) 1103, 1186, 1195
MalI GATC 3 cut(s) 306, 536, 741
MboI GATC 3 cut(s) 304, 534, 739
MboII GAAGA 9 cut(s) 43, 230, 407, 491, 815, 820, 843, 1183, 1372
MfeI CAATTG 1 cut(s) 1293
MhlI GDGCHC 3 cut(s) 274, 1134, 1333
MlsI TGGCCA 1 cut(s) 398
MluCI AATT 7 cut(s) 282, 330, 581, 835, 984, 1014, 1293
MluNI TGGCCA 1 cut(s) 398
MlyI GAGTC 1 cut(s) 369
MmeI TCCRAC 1 cut(s) 296
Mox20I TGGCCA 1 cut(s) 398
MroI TCCGGA 1 cut(s) 694
MroXI GAANNNNTTC 1 cut(s) 1041
MscI TGGCCA 1 cut(s) 398
MseI TTAA 5 cut(s) 105, 384, 450, 845, 1151
MslI CAYNNNNRTG 1 cut(s) 1193
Msp20I TGGCCA 1 cut(s) 398
MspA1I CMGCKG 1 cut(s) 1304
MspI CCGG 4 cut(s) 57, 695, 768, 1128
MspR9I CCNGG 4 cut(s) 57, 520, 1129, 1362
MunI CAATTG 1 cut(s) 1293
MvaI CCWGG 2 cut(s) 520, 1362
MvnI CGCG 1 cut(s) 1145
MwoI GCNNNNNNNGC 4 cut(s) 82, 467, 572, 1271
NciI CCSGG 2 cut(s) 57, 1129
NdeII GATC 3 cut(s) 304, 534, 739
NlaIII CATG 4 cut(s) 502, 887, 892, 1448
NmuCI GTSAC 2 cut(s) 1186, 1195
NspI RCATGY 1 cut(s) 502
OliI CACNNNNGTG 1 cut(s) 1193
PagI TCATGA 1 cut(s) 883
PdmI GAANNNNTTC 1 cut(s) 1041
PflMI CCANNNNNTGG 1 cut(s) 1307
PkrI GCNGC 4 cut(s) 87, 150, 1252, 1351
PleI GAGTC 1 cut(s) 369
PpsI GAGTC 1 cut(s) 369
PshAI GACNNNNGTC 1 cut(s) 51
Psp124BI GAGCTC 1 cut(s) 274
Psp6I CCWGG 2 cut(s) 518, 1360
PspFI CCCAGC 2 cut(s) 544, 567
PspGI CCWGG 2 cut(s) 518, 1360
PspPI GGNCC 9 cut(s) 95, 443, 542, 565, 840, 918, 1049, 1231, 1298
PstI CTGCAG 1 cut(s) 90
PvuII CAGCTG 1 cut(s) 1304
RseI CAYNNNNRTG 1 cut(s) 1193
SacI GAGCTC 1 cut(s) 274
SaqAI TTAA 5 cut(s) 105, 384, 450, 845, 1151
SatI GCNGC 4 cut(s) 86, 149, 1251, 1350
Sau3AI GATC 3 cut(s) 304, 534, 739
Sau96I GGNCC 9 cut(s) 95, 443, 542, 565, 840, 918, 1049, 1231, 1298
SchI GAGTC 1 cut(s) 369
ScrFI CCNGG 4 cut(s) 57, 520, 1129, 1362
SduI GDGCHC 3 cut(s) 274, 1134, 1333
SfaNI GCATC 4 cut(s) 769, 773, 1169, 1336
SfcI CTRYAG 1 cut(s) 86
SinI GGWCC 4 cut(s) 443, 1049, 1231, 1298
SmiMI CAYNNNNRTG 1 cut(s) 1193
Sse9I AATT 7 cut(s) 282, 330, 581, 835, 984, 1014, 1293
SsiI CCGC 2 cut(s) 1143, 1311
SspMI CTAG 1 cut(s) 726
SstI GAGCTC 1 cut(s) 274
StyD4I CCNGG 4 cut(s) 55, 518, 1127, 1360
TaaI ACNGT 3 cut(s) 343, 508, 1157
TaiI ACGT 3 cut(s) 969, 1035, 1342
TaqI TCGA 1 cut(s) 1398
TasI AATT 7 cut(s) 282, 330, 581, 835, 984, 1014, 1293
Tru1I TTAA 5 cut(s) 105, 384, 450, 845, 1151
Tru9I TTAA 5 cut(s) 105, 384, 450, 845, 1151
TscAI CASTG 1 cut(s) 354
TseFI GTSAC 2 cut(s) 1186, 1195
TseI GCWGC 4 cut(s) 85, 148, 1250, 1349
Tsp45I GTSAC 2 cut(s) 1186, 1195
TspDTI ATGAA 5 cut(s) 243, 762, 801, 872, 1372
TspGWI ACGGA 3 cut(s) 615, 1174, 1272
TspRI CASTG 1 cut(s) 354
Van91I CCANNNNNTGG 1 cut(s) 1307
VpaK11BI GGWCC 4 cut(s) 443, 1049, 1231, 1298
XapI RAATTY 1 cut(s) 581
XceI RCATGY 1 cut(s) 502
XmnI GAANNNNTTC 1 cut(s) 1041
XspI CTAG 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.