FvH4_7g05850

XS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009713
Physical Location & Seq
Reverse (-)
6075395 .. 6081430
6036 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g05850.t1

Sequence Viewer

Length: 3024 bp
ATGCAACCTCGGAGGCATGAGGGTTTCAGTAGACAGCAGCCTCCAGAGCCTAAATTACATCCTGAGTACCGATTCGAATCTGGTGCTGCTGCCAACAACCCTGATGGTAGTGCTAGTGTTAGTAGGAGGAGACCTGAGGAGGTACACCGGACTATTATTAGGAGGAGTTTGAGCCCTCAGCAAGATCATCTTGCTGTCAGTCAAAGGAATGTTGCGAGGAGGGAGTACAGCTGGCATTTGGGCAGCCGTGGCCGTAGGATTGATCCCGTGCGGCGCAGGTCAAGATCGGGGTCACCGCTGCGGCTGCCTTATGGTGAACTGAGGAAAATGTCACAATTTGAGGAGGAAGAGGAAGACGGGGATTTTCGTAGGAGTTATTCACCGCCACCACCAGTACCTGTTCCGGTGTCTGTTCCTTTGGAGTTAAAACAGAGACATGACGGAGGTGAGGCTGGGAGTTATGGTGGCAGTGATGATCTAAATGGTAGGCGAGTTTATGGCTCTGAGCATAATGATTTTGGAATCAGTAAAGAGGAACTGAATGAAAGCAGATTGTTAGCTGGCGGTAAACATGGGACGTTAGGTCAAAAATCAATCCATATAGAAGATAGTGCTGTAAGAGGATCAAAAACCGTGTTCATTGAAGGTGACACTGTGCCAGGAGCATATCATTCTCCTCCAAGCCTTGGTCCTGTTATAACTCAAAGGGCAAGGGGTGGCTGCCTACCATCATCAACGCGTGGCATGAGTGTACGTCGATCTGACCAAGAAAGGCTTCATTATTCGCACCCTGTATCTTTGGATAGATTACCAGTGACAGAAGTCTACAAAGAAGGAAAGAAACCCGCTTTTCCTACAAGGGATGGCTTCCATTCCATGATGTCAGGATCTCATTCCAAGGATTACTTTGCTAGCTCCTCAACAGGGTTGAGGAATGACTTCCAAGATCCCTATCGGCATGACCAGCACATGCCTTCTTTGGAGGAATTTTCAAGAAGTAGAAAACTAAAAGATTCGGTAAGCATTAATGCATATAGGGAAAGACCGGTAGTAGAGTTTGCTCGAGATCCTGATTCTGGGCAGAAGAATCTGAAATTTTACCAGAGAGATAGTCCTACTAGAGTTGAGTATGATGATGACTATTATTTCTACCCGAACTCAAGGGGAATGATATTTGATGATCGTGAGCTTCCATCTGATCACTTACACAAAGTTATGCATCCACGAGTACCACTTGACTATGACCATTCTCGAATTGGATATGATCACAGAACTGTGTCAAGATCTAGTACCATGCTCCCTGTTGTGGACAGAATTGATAATATTGAGGATTATTCTGGAAATTCGAGAAAGGGCATTGTGCTGAATACTTCTACTTTAGAAAGGCACACACTATCAGACTACCCAGATAGAAGCAGAATATCAAGTACATCAAAGCAGGGTGGAGAATATATGGGTTCTGGACACATGCATGGCAAGTCTGGAAGGAGAATATCACAAGACTATGAAATAAATCATTTGGGTGCAGCGCAAGTTTGTCAAATCTCACATCTGAAAGAAGATTATGGTATTGAAAGAGAAAGAAACCTGAAGTTTCAGGACAGGCAGTCTCCTGTGACCAAATACGACGCGGAAAAGCATAGAAATACTATTAGAATGCAGAGTATAAGAGACAAGCTTGGAGTATATGAACCATCAGATAGGATGCTGAAAAGAAAATATGTTAATGAAGAGCATGGAAGTATCCATAATCCTAGAGAAATTATGTCAGGTAACTGGAATACATCTAGAGAGTTTCAAGATTGGTATGATAGTGGTGAAGAGTGGAATGGTGAAGATGTAGGGTCTGTGTATACATCTAGATCAGCAAGAGTGGGCCATAATGAATACTCTAAGGCCAAGAGGAAATACACTGGAATAGACCAGTATGATGAATTTGCATCAGATGATCGGCTGCTGTCTCAAGACTCTTTGGCGCATTCACAAAGGCACTCAGTTAGATATTATAAAAATGGTGATCAGTATGGCAAGGGCCACCAAAACTATGGTTCATTAAGTAGGCATAGGTCACAGCAAGTTGACATAAAAAGTGGCTTTCACAAACAGCACAAAGTTTGGAAGAGAAGTGATAATTATCTAGAGGATGACCTCGTAGGTGATGATAATGATGCTGATCCATCAGAAGATGGGCTGAGTTCTGCAGCTCTTGAGCCATCAGAGGATTCTGAGGAGTTTATGCAATTGGTACACGAAGCCTTCCTAAGATACTCTAAACAATTAAATATGCACCAGGGTGTTCGGAGGAGATACATGGAACAAGGAAAGGCTGGAACTTTGTTCTGCATCGTATGTGGCCGAAGCTTCTCGAAGGAGTTCATGGACACTCAACGATTGGTTACACATGCATTTATGTCTAAAAAAGCTGGGTTGAGAGCACAACACTTGGGACTTCTCAAAGCAGTTTGTGCTCTGTTGGGGTGGAGTACTGCTATCCCCACTGACATTGTACTGTGGGTTCCCCAAGTCTTGCCGCAGGCAGAAGCTTTGGCTCAGAAGGAAGATTTGATTCTTTGGCCTCCAGTCATCATTATCCACAATGTTTCTATGTCAGACAACAATCCTGAAAATTGGAAGGTTGTAAGTATTGAAGATCTTGAGGCTTTTCTAAGAGGTAAAGGTTTAATTAGGGGGCGAATCAAGATGTGCCTGGGGAAGCCTGCTGATCAAAGTGTTGTGTTGGTGAAGTTCTTGGGAACTTTCACTGGGCTTGGGAATGCAGAGAGGATTCATAAGTACTTTGCAGAGCAGAACCGTGGCAGAGCAGACTTTGAGCGAGCAACCTCCAACAACGGAAATATAGTTGAAGCAGGAATCCCAGGTGACAGTGTGGAGGAGCGACTTTTACATGGATATATGGGGATTGCAGAGGACTTAGACAAAGTAGATTTTAATACCAGGAACTGGAGTTTGATAAAGAGCAAGAAGGAGATTCAGGACTTGGCCAATGCTCCTGTTAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
XS

Protein Analysis

1008

Amino Acids

114.84

Weight (kDa)

8.36

Isoelectric Point (pI)

63.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XS PF03468 853 - 979 3.1e-18 XS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 698, 2007
Acc36I ACCTGC 1 cut(s) 267
AccB7I CCANNNNNTGG 2 cut(s) 686, 2961
AccI GTMKAC 3 cut(s) 31, 825, 1853
AccII CGCG 2 cut(s) 739, 1631
AciI CCGC 8 cut(s) 271, 296, 301, 383, 564, 846, 1631, 2531
AclWI GGATC 6 cut(s) 257, 631, 895, 941, 1061, 2168
AcoI YGGCCR 3 cut(s) 250, 2353, 3000
AcsI RAATTY 4 cut(s) 986, 1094, 1342, 1934
AcuI CTGAAG 1 cut(s) 1610
AfiI CCNNNNNNNGG 5 cut(s) 686, 924, 1076, 1306, 2961
AflIII ACRYGT 1 cut(s) 737
AgeI ACCGGT 1 cut(s) 1045
AgsI TTSAA 6 cut(s) 644, 993, 1574, 1799, 2648, 2864
AhdI GACNNNNNGTC 2 cut(s) 582, 1606
AjnI CCWGG 5 cut(s) 658, 2289, 2706, 2875, 2954
AjuI GAANNNNNNNTTGG 2 cut(s) 759, 791
AleI CACNNNNGTG 1 cut(s) 2292
AluBI AGCT 9 cut(s) 231, 560, 915, 1189, 1678, 2204, 2361, 2423, 2543
AluI AGCT 9 cut(s) 231, 560, 915, 1189, 1678, 2204, 2361, 2423, 2543
Alw21I GWGCWC 2 cut(s) 2437, 2470
Alw26I GTCTC 5 cut(s) 124, 427, 1614, 1665, 1965
AlwI GGATC 6 cut(s) 257, 631, 895, 941, 1061, 2168
AlwNI CAGNNNCTG 2 cut(s) 398, 2961
Ama87I CYCGRG 1 cut(s) 1062
AoxI GGCC 7 cut(s) 250, 1876, 1896, 2032, 2353, 2573, 3000
ApoI RAATTY 4 cut(s) 986, 1094, 1342, 1934
AseI ATTAAT 1 cut(s) 1026
AsiGI ACCGGT 1 cut(s) 1045
Asp700I GAANNNNTTC 3 cut(s) 774, 938, 2372
AspLEI GCGC 3 cut(s) 276, 1531, 1978
AspS9I GGNCC 3 cut(s) 689, 1876, 2032
AsuII TTCGAA 1 cut(s) 75
AsuNHI GCTAGC 1 cut(s) 911
AvaI CYCGRG 1 cut(s) 1062
AvaII GGWCC 1 cut(s) 689
AxyI CCTNAGG 1 cut(s) 135
BalI TGGCCA 1 cut(s) 3002
BanII GRGCYC 1 cut(s) 176
BauI CACGAG 1 cut(s) 1224
BbsI GAAGAC 1 cut(s) 360
Bbv12I GWGCWC 2 cut(s) 2437, 2470
BbvCI CCTCAGC 1 cut(s) 177
BccI CCATC 8 cut(s) 98, 736, 857, 1201, 1702, 2180, 2185, 2221
BceAI ACGGC 2 cut(s) 231, 237
BcgI CGANNNNNNTGC 2 cut(s) 65, 99
BciT130I CCWGG 5 cut(s) 660, 2291, 2708, 2877, 2956
BciVI GTATCC 1 cut(s) 1754
BclI TGATCA 4 cut(s) 1198, 1264, 2017, 2722
BcoDI GTCTC 5 cut(s) 124, 427, 1614, 1665, 1965
BfaI CTAG 8 cut(s) 114, 912, 1119, 1287, 1755, 1788, 1860, 2138
BfmI CTRYAG 1 cut(s) 2199
BfuAI ACCTGC 1 cut(s) 267
BfuI GTATCC 1 cut(s) 1754
BglII AGATCT 2 cut(s) 1283, 2650
BmcAI AGTACT 2 cut(s) 2485, 2795
Bme1390I CCNGG 5 cut(s) 660, 2291, 2708, 2877, 2956
Bme18I GGWCC 1 cut(s) 689
BmeRI GACNNNNNGTC 2 cut(s) 582, 1606
BmeT110I CYCGRG 1 cut(s) 1062
BmgT120I GGNCC 3 cut(s) 689, 1876, 2032
BmiI GGNNCC 1 cut(s) 2517
BmrFI CCNGG 5 cut(s) 660, 2291, 2708, 2877, 2956
BmrI ACTGGG 1 cut(s) 2772
BmsI GCATC 5 cut(s) 1228, 1695, 1949, 2158, 2352
BmtI GCTAGC 1 cut(s) 915
BmuI ACTGGG 1 cut(s) 2772
BoxI GACNNNNGTC 1 cut(s) 821
BpiI GAAGAC 1 cut(s) 360
BpmI CTGGAG 3 cut(s) 27, 2562, 2983
Bpu10I CCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 1 cut(s) 75
BpuEI CTTGAG 4 cut(s) 1144, 1947, 2228, 2675
BsaBI GATNNNNATC 4 cut(s) 76, 951, 2133, 2172
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 8 cut(s) 8, 247, 685, 897, 2290, 2707, 2812, 2875
BsaWI WCCGGW 3 cut(s) 147, 403, 1045
BsaXI ACNNNNNCTCC 2 cut(s) 448, 478
Bsc4I CCNNNNNNNGG 5 cut(s) 686, 924, 1076, 1306, 2961
Bse118I RCCGGY 1 cut(s) 1045
Bse1I ACTGG 8 cut(s) 392, 812, 1781, 1918, 1924, 2579, 2767, 2966
Bse21I CCTNAGG 1 cut(s) 135
Bse8I GATNNNNATC 4 cut(s) 76, 951, 2133, 2172
BseBI CCWGG 5 cut(s) 660, 2291, 2708, 2877, 2956
BseDI CCNNGG 8 cut(s) 8, 247, 685, 897, 2290, 2707, 2812, 2875
BseGI GGATG 5 cut(s) 58, 868, 1219, 1710, 2149
BseJI GATNNNNATC 4 cut(s) 76, 951, 2133, 2172
BseLI CCNNNNNNNGG 5 cut(s) 686, 924, 1076, 1306, 2961
BseMII CTCAG 9 cut(s) 54, 126, 191, 311, 495, 2007, 2183, 2217, 2564
BseNI ACTGG 8 cut(s) 392, 812, 1781, 1918, 1924, 2579, 2767, 2966
BseYI CCCAGC 2 cut(s) 452, 2423
BsgI GTGCAG 1 cut(s) 1545
Bsh1236I CGCG 2 cut(s) 739, 1631
BshFI GGCC 7 cut(s) 252, 1878, 1898, 2034, 2355, 2575, 3002
BshTI ACCGGT 1 cut(s) 1045
BsiHKAI GWGCWC 2 cut(s) 2437, 2470
BsiHKCI CYCGRG 1 cut(s) 1062
BsiSI CCGG 3 cut(s) 148, 404, 1046
BslFI GGGAC 2 cut(s) 589, 2460
BslI CCNNNNNNNGG 5 cut(s) 686, 924, 1076, 1306, 2961
BsmAI GTCTC 5 cut(s) 124, 427, 1614, 1665, 1965
BsmFI GGGAC 2 cut(s) 589, 2460
BsmI GAATGC 3 cut(s) 1662, 1978, 2779
BsnI GGCC 7 cut(s) 252, 1878, 1898, 2034, 2355, 2575, 3002
Bso31I GGTCTC 1 cut(s) 124
BsoBI CYCGRG 1 cut(s) 1062
Bsp119I TTCGAA 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 176, 2437, 2470
BspACI CCGC 8 cut(s) 271, 296, 301, 383, 564, 846, 1631, 2531
BspANI GGCC 7 cut(s) 252, 1878, 1898, 2034, 2355, 2575, 3002
BspCNI CTCAG 9 cut(s) 55, 127, 190, 312, 496, 2006, 2184, 2218, 2563
BspFNI CGCG 2 cut(s) 739, 1631
BspLI GGNNCC 1 cut(s) 2517
BspMAI CTGCAG 1 cut(s) 2203
BspMI ACCTGC 1 cut(s) 267
BspOI GCTAGC 1 cut(s) 915
BspPI GGATC 6 cut(s) 257, 631, 895, 941, 1061, 2168
BspQI GCTCTTC 1 cut(s) 1725
BspT104I TTCGAA 1 cut(s) 75
BspTNI GGTCTC 1 cut(s) 124
BsrFI RCCGGY 1 cut(s) 1045
BsrI ACTGG 8 cut(s) 392, 812, 1781, 1918, 1924, 2579, 2767, 2966
BssAI RCCGGY 1 cut(s) 1045
BssECI CCNNGG 8 cut(s) 8, 247, 685, 897, 2290, 2707, 2812, 2875
BssNAI GTATAC 1 cut(s) 1854
BssSI CACGAG 1 cut(s) 1224
BssT1I CCWWGG 2 cut(s) 685, 897
Bst1107I GTATAC 1 cut(s) 1854
Bst2BI CACGAG 1 cut(s) 1224
Bst2UI CCWGG 5 cut(s) 660, 2291, 2708, 2877, 2956
Bst4CI ACNGT 6 cut(s) 634, 655, 1276, 2511, 2813, 2885
Bst6I CTCTTC 4 cut(s) 342, 1725, 1815, 2114
BstAPI GCANNNNNTGC 1 cut(s) 2465
BstBI TTCGAA 1 cut(s) 75
BstC8I GCNNGC 6 cut(s) 233, 562, 913, 2535, 2718, 2835
BstDSI CCRYGG 2 cut(s) 247, 2812
BstEII GGTNACC 1 cut(s) 291
BstF5I GGATG 5 cut(s) 58, 868, 1219, 1710, 2149
BstFNI CGCG 2 cut(s) 739, 1631
BstHHI GCGC 3 cut(s) 276, 1531, 1978
BstMAI GTCTC 5 cut(s) 124, 427, 1614, 1665, 1965
BstMWI GCNNNNNNNGC 5 cut(s) 46, 249, 304, 964, 2465
BstNI CCWGG 5 cut(s) 660, 2291, 2708, 2877, 2956
BstNSI RCATGY 3 cut(s) 973, 1471, 2405
BstPAI GACNNNNGTC 1 cut(s) 821
BstPI GGTNACC 1 cut(s) 291
BstSCI CCNGG 5 cut(s) 658, 2289, 2706, 2875, 2954
BstSFI CTRYAG 1 cut(s) 2199
BstUI CGCG 2 cut(s) 739, 1631
BstV2I GAAGAC 1 cut(s) 360
BstX2I RGATCY 5 cut(s) 887, 946, 1066, 1283, 2650
BstXI CCANNNNNNTGG 1 cut(s) 2045
BstYI RGATCY 5 cut(s) 887, 946, 1066, 1283, 2650
BstZ17I GTATAC 1 cut(s) 1854
Bsu36I CCTNAGG 1 cut(s) 135
BsuI GTATCC 1 cut(s) 1754
BsuRI GGCC 7 cut(s) 252, 1878, 1898, 2034, 2355, 2575, 3002
BtgI CCRYGG 2 cut(s) 247, 2812
BtsCI GGATG 5 cut(s) 58, 868, 1219, 1710, 2149
BtsI GCAGTG 1 cut(s) 475
BtsIMutI CAGTG 7 cut(s) 475, 651, 819, 1911, 2496, 2760, 2890
BveI ACCTGC 1 cut(s) 267
Cac8I GCNNGC 6 cut(s) 233, 562, 913, 2535, 2718, 2835
CaiI CAGNNNCTG 2 cut(s) 398, 2961
CfoI GCGC 3 cut(s) 276, 1531, 1978
Cfr10I RCCGGY 1 cut(s) 1045
Cfr13I GGNCC 3 cut(s) 689, 1876, 2032
CseI GACGC 1 cut(s) 1637
CspAI ACCGGT 1 cut(s) 1045
CspCI CAANNNNNGTGG 2 cut(s) 2485, 2520
DriI GACNNNNNGTC 2 cut(s) 582, 1606
EaeI YGGCCR 3 cut(s) 250, 2353, 3000
Eam1104I CTCTTC 4 cut(s) 342, 1725, 1815, 2114
Eam1105I GACNNNNNGTC 2 cut(s) 582, 1606
EarI CTCTTC 4 cut(s) 342, 1725, 1815, 2114
Eco130I CCWWGG 2 cut(s) 685, 897
Eco24I GRGCYC 1 cut(s) 176
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 689
Eco57I CTGAAG 1 cut(s) 1610
Eco81I CCTNAGG 1 cut(s) 135
Eco88I CYCGRG 1 cut(s) 1062
Eco91I GGTNACC 1 cut(s) 291
EcoO65I GGTNACC 1 cut(s) 291
EcoRII CCWGG 5 cut(s) 658, 2289, 2706, 2875, 2954
EcoT14I CCWWGG 2 cut(s) 685, 897
EcoT22I ATGCAT 4 cut(s) 1033, 1221, 1473, 2407
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 2 cut(s) 685, 897
FalI AAGNNNNNCTT 6 cut(s) 174, 206, 759, 791, 890, 922
FaqI GGGAC 2 cut(s) 589, 2460
FauI CCCGC 1 cut(s) 853
FbaI TGATCA 4 cut(s) 1198, 1264, 2017, 2722
FblI GTMKAC 3 cut(s) 31, 825, 1853
FokI GGATG 5 cut(s) 45, 875, 1206, 1717, 2156
FriOI GRGCYC 1 cut(s) 176
FspBI CTAG 8 cut(s) 114, 912, 1119, 1287, 1755, 1788, 1860, 2138
GlaI GCGC 3 cut(s) 275, 1530, 1977
GsaI CCCAGC 2 cut(s) 456, 2427
GsuI CTGGAG 3 cut(s) 27, 2562, 2983
HaeIII GGCC 7 cut(s) 252, 1878, 1898, 2034, 2355, 2575, 3002
HapII CCGG 3 cut(s) 148, 404, 1046
HgaI GACGC 1 cut(s) 1637
HhaI GCGC 3 cut(s) 276, 1531, 1978
Hin6I GCGC 3 cut(s) 274, 1529, 1976
HinP1I GCGC 3 cut(s) 274, 1529, 1976
HincII GTYRAC 1 cut(s) 2080
HindII GTYRAC 1 cut(s) 2080
HindIII AAGCTT 3 cut(s) 1676, 2359, 2541
HpaII CCGG 3 cut(s) 148, 404, 1046
Hpy99I CGWCG 2 cut(s) 759, 1631
HpyAV CCTTC 9 cut(s) 638, 827, 984, 1479, 2266, 2362, 2548, 2626, 2977
HpyCH4III ACNGT 6 cut(s) 634, 655, 1276, 2511, 2813, 2885
HpyCH4IV ACGT 2 cut(s) 578, 754
HpyF10VI GCNNNNNNNGC 5 cut(s) 46, 249, 304, 964, 2465
HpySE526I ACGT 2 cut(s) 578, 754
HspAI GCGC 3 cut(s) 274, 1529, 1976
Ksp22I TGATCA 4 cut(s) 1198, 1264, 2017, 2722
LguI GCTCTTC 1 cut(s) 1725
LmnI GCTCC 5 cut(s) 662, 920, 1302, 2893, 3013
LweI GCATC 5 cut(s) 1228, 1695, 1949, 2158, 2352
MaeI CTAG 8 cut(s) 114, 912, 1119, 1287, 1755, 1788, 1860, 2138
MaeII ACGT 2 cut(s) 578, 754
MaeIII GTNAC 9 cut(s) 291, 330, 647, 814, 1615, 1772, 2067, 2395, 2879
MfeI CAATTG 1 cut(s) 2240
MflI RGATCY 5 cut(s) 887, 946, 1066, 1283, 2650
MhlI GDGCHC 3 cut(s) 176, 2437, 2470
MlsI TGGCCA 1 cut(s) 3002
MluI ACGCGT 1 cut(s) 737
MluNI TGGCCA 1 cut(s) 3002
MlyI GAGTC 1 cut(s) 1961
MmeI TCCRAC 1 cut(s) 2868
Mox20I TGGCCA 1 cut(s) 3002
Mph1103I ATGCAT 4 cut(s) 1033, 1221, 1473, 2407
MroXI GAANNNNTTC 3 cut(s) 774, 938, 2372
MscI TGGCCA 1 cut(s) 3002
MseI TTAA 8 cut(s) 425, 1026, 1725, 2054, 2279, 2681, 2949, 3015
MslI CAYNNNNRTG 3 cut(s) 1470, 1521, 2292
Msp20I TGGCCA 1 cut(s) 3002
MspA1I CMGCKG 2 cut(s) 231, 298
MspI CCGG 3 cut(s) 148, 404, 1046
MspR9I CCNGG 5 cut(s) 660, 2291, 2708, 2877, 2956
MunI CAATTG 1 cut(s) 2240
Mva1269I GAATGC 3 cut(s) 1662, 1978, 2779
MvaI CCWGG 5 cut(s) 660, 2291, 2708, 2877, 2956
MvnI CGCG 2 cut(s) 739, 1631
MwoI GCNNNNNNNGC 5 cut(s) 46, 249, 304, 964, 2465
NheI GCTAGC 1 cut(s) 911
NlaIV GGNNCC 1 cut(s) 2517
NmuCI GTSAC 7 cut(s) 291, 330, 647, 814, 1615, 2067, 2879
NsiI ATGCAT 4 cut(s) 1033, 1221, 1473, 2407
NspI RCATGY 3 cut(s) 973, 1471, 2405
NspV TTCGAA 1 cut(s) 75
OliI CACNNNNGTG 1 cut(s) 2292
PaeR7I CTCGAG 1 cut(s) 1062
PciSI GCTCTTC 1 cut(s) 1725
PctI GAATGC 3 cut(s) 1662, 1978, 2779
PdmI GAANNNNTTC 3 cut(s) 774, 938, 2372
PflMI CCANNNNNTGG 2 cut(s) 686, 2961
PinAI ACCGGT 1 cut(s) 1045
PleI GAGTC 1 cut(s) 1961
PpsI GAGTC 1 cut(s) 1961
PshAI GACNNNNGTC 1 cut(s) 821
PshBI ATTAAT 1 cut(s) 1026
PsiI TTATAA 2 cut(s) 698, 2007
Psp6I CCWGG 5 cut(s) 658, 2289, 2706, 2875, 2954
PspEI GGTNACC 1 cut(s) 291
PspFI CCCAGC 2 cut(s) 452, 2423
PspGI CCWGG 5 cut(s) 658, 2289, 2706, 2875, 2954
PspN4I GGNNCC 1 cut(s) 2517
PspPI GGNCC 3 cut(s) 689, 1876, 2032
PsrI GAACNNNNNNTAC 2 cut(s) 2499, 2531
PstI CTGCAG 1 cut(s) 2203
PstNI CAGNNNCTG 2 cut(s) 398, 2961
PsuI RGATCY 5 cut(s) 887, 946, 1066, 1283, 2650
PvuII CAGCTG 1 cut(s) 231
RseI CAYNNNNRTG 3 cut(s) 1470, 1521, 2292
SapI GCTCTTC 1 cut(s) 1725
SaqAI TTAA 8 cut(s) 425, 1026, 1725, 2054, 2279, 2681, 2949, 3015
Sau96I GGNCC 3 cut(s) 689, 1876, 2032
ScaI AGTACT 2 cut(s) 2485, 2795
SchI GAGTC 1 cut(s) 1961
ScrFI CCNGG 5 cut(s) 660, 2291, 2708, 2877, 2956
SduI GDGCHC 3 cut(s) 176, 2437, 2470
SfaNI GCATC 5 cut(s) 1228, 1695, 1949, 2158, 2352
SfcI CTRYAG 1 cut(s) 2199
Sfr274I CTCGAG 1 cut(s) 1062
SfuI TTCGAA 1 cut(s) 75
SinI GGWCC 1 cut(s) 689
SlaI CTCGAG 1 cut(s) 1062
SmiMI CAYNNNNRTG 3 cut(s) 1470, 1521, 2292
SmlI CTYRAG 5 cut(s) 1062, 1159, 1962, 2207, 2654
SmoI CTYRAG 5 cut(s) 1062, 1159, 1962, 2207, 2654
SsiI CCGC 8 cut(s) 271, 296, 301, 383, 564, 846, 1631, 2531
SspI AATATT 1 cut(s) 1324
SspMI CTAG 8 cut(s) 114, 912, 1119, 1287, 1755, 1788, 1860, 2138
StyD4I CCNGG 5 cut(s) 658, 2289, 2706, 2875, 2954
StyI CCWWGG 2 cut(s) 685, 897
TaaI ACNGT 6 cut(s) 634, 655, 1276, 2511, 2813, 2885
TaiI ACGT 2 cut(s) 581, 757
TaqI TCGA 6 cut(s) 75, 757, 1063, 1252, 1346, 2366
TatI WGTACW 5 cut(s) 225, 1427, 2483, 2506, 2793
TauI GCSGC 3 cut(s) 274, 304, 2533
Tru1I TTAA 8 cut(s) 425, 1026, 1725, 2054, 2279, 2681, 2949, 3015
Tru9I TTAA 8 cut(s) 425, 1026, 1725, 2054, 2279, 2681, 2949, 3015
TscAI CASTG 7 cut(s) 475, 658, 819, 1918, 2503, 2767, 2890
TseFI GTSAC 7 cut(s) 291, 330, 647, 814, 1615, 2067, 2879
Tsp45I GTSAC 7 cut(s) 291, 330, 647, 814, 1615, 2067, 2879
TspGWI ACGGA 2 cut(s) 456, 2865
TspRI CASTG 7 cut(s) 475, 658, 819, 1918, 2503, 2767, 2890
Van91I CCANNNNNTGG 2 cut(s) 686, 2961
VpaK11BI GGWCC 1 cut(s) 689
VspI ATTAAT 1 cut(s) 1026
XapI RAATTY 4 cut(s) 986, 1094, 1342, 1934
XbaI TCTAGA 3 cut(s) 1787, 1859, 2137
XceI RCATGY 3 cut(s) 973, 1471, 2405
XcmI CCANNNNNNNNNTGG 2 cut(s) 1253, 2042
XhoI CTCGAG 1 cut(s) 1062
XmiI GTMKAC 3 cut(s) 31, 825, 1853
XmnI GAANNNNTTC 3 cut(s) 774, 938, 2372
XspI CTAG 8 cut(s) 114, 912, 1119, 1287, 1755, 1788, 1860, 2138
ZrmI AGTACT 2 cut(s) 2485, 2795
Zsp2I ATGCAT 4 cut(s) 1033, 1221, 1473, 2407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.