pycom07g05140

XS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0009713
Physical Location & Seq
Reverse (-)
4397233 .. 4401118
3886 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g05140.1

Sequence Viewer

Length: 1773 bp
ATGGTTTATGAGCATCAAAATTTGTCAAGACCTAGTAGTATGAACCCTGTTATGGATAGAATGGATGATACTGAGGGATTTTCTGGAAATTCAAGAAAGGGCATTATGCTAAATAATCCTACTTTGCAAAGGCAATCTTTAATAGACTACCCTGATTCAAGAAGAGTATCAGAGACATCAAAGCACGGTGCGGAATATTCAGGTTCAGGACGCACACATGTCAATTTAGGAAGGAGAAATCCACAAGATTATGAACTATCCCATTTCGGGGCATCCCAAGATTTTCAGGTCGCACATCCAAAAGAAGATTATGGTTTTGAAAGAGATGTGAATCTGAAGTATCAGGACAGGCTGTCTCCTGTATCAAAATATGAGTCAGAAATGCGTGGACATCCTGCTGGAATGCAGATTATGAGGGAGGAGCTTGGAATATATGAACCATCAGATAGGATGCTCAAAAGAAACTATGCTACTGAAGAACATATGAGTACACATAATCCTAGAACTATTATGTCTAGTAAGTGGGCATCTAGAGAATTCCAAGATTTATATGATAGTGGTGAAGAGTGGAATGATGGAGATGTAGGCAGTTTCTGTACATCTGCATCAGCTGGATTTGATCATGATAGATACAGTAAGGCTAAGAGGGTATTTGTTGGGCGCCGTCATGATGAATATGAATATGATGATTGGTTGCCATCTCAACACTCTTTTGAAAATGCGCAAAGGCATTCAGTCAGATTCTATAAACAAGGTGATCGATATATAAAGGGTCATCGAAAGTCTGGTCCATTAAGTAGGCATAAGCCGCACCACACTGATATAAAAAGTGGTGTTCACAAACAGCACCGAGTTTGGAAAAGACATGATAGTTATTTAGAAGATGTCCATGCAAGTGATGGTACTGATGTTGATGTATCAGAAAATGGGCTGAGCTCTGCAGGCCCTGAGCCATCCGAGGACTCTGAGGAGTTTTTGCAAATGGTAAATGAAGCCTTTTTAACATTTTCTAAAAAGCTAAATATGAACTCGGCTGTTCGGAGAAGATACAAGGAACAAGGAAAGGCTGGTACTTTGTTCTGCATCGTATGCGGCCGAAGCTTGTCGAAGGAGTTCATGGACACTCAGCGCCTGGTAACACATGCATATATGTCTCACAAAGTTGGGCTGAGGGCACAGCACTTGGGTCTTCTAAAAGCAGTTTGTGTTCTGTTGGGATGGAGTACCGTTGTCCCCCCTGACACGGTCACTTGGGTTCCCCAGGTCCTGCCCAAGGCAGAAGCTTTGGCTCAGAAGGAAGATTTGATTCTCTGGCCTCCTGTAATTGTTGTCCACAATATTTCTATGTCTGACAACAATCCTGAATGTTGGAAGGTCGTATCCATGGAGGCGCTCGAGGCTTTTCTAAGAAGTAACGGTTTGATCAAGGGAAGAATCAAGATTTGCCTGGGCAAGCCTGCTGACCAAAGTGTTTTGGTGGTGAAGTTCTTGGGAACGTTTACTGGGCTTGGGGACGCGGAGAGGATTCAGAAGCATTTTGCAGAGCATAAGCGTGGCAGAGTAGATTTTGAGCAAGCAACATCCTTGAATGGCAAAATTGTGGAAGCAGCAATGCAGGGAGACAACCCGGAGGAGCGATTTCTATATGGGTATATGGGCATCGTAGAGGACTTGGATAAAGTGGATTTCCATACCAGGAGCTGGACTGTGATAAAGAGCAAGAAAGAGATTCAGGACCTGGCCAATGCTCCCGTCAAACCTGATGAGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
XS

Protein Analysis

591

Amino Acids

67.38

Weight (kDa)

6.73

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XS PF03468 433 - 559 3e-18 XS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 723
AccB1I GGYRCC 1 cut(s) 660
AccB7I CCANNNNNTGG 1 cut(s) 1701
AccII CGCG 1 cut(s) 1517
AciI CCGC 4 cut(s) 191, 809, 1092, 1517
AclI AACGTT 1 cut(s) 1496
AcoI YGGCCR 2 cut(s) 1093, 1740
AcsI RAATTY 3 cut(s) 19, 88, 536
AcuI CTGAAG 2 cut(s) 356, 495
AcyI GRCGYC 1 cut(s) 661
AfaI GTAC 5 cut(s) 490, 598, 904, 1072, 1225
AfiI CCNNNNNNNGG 6 cut(s) 52, 267, 268, 1243, 1273, 1701
AflIII ACRYGT 1 cut(s) 217
AgsI TTSAA 5 cut(s) 93, 159, 320, 716, 1588
AhdI GACNNNNNGTC 1 cut(s) 352
AjnI CCWGG 5 cut(s) 1131, 1260, 1446, 1694, 1737
AluBI AGCT 7 cut(s) 424, 611, 936, 1018, 1101, 1283, 1701
AluI AGCT 7 cut(s) 424, 611, 936, 1018, 1101, 1283, 1701
Alw21I GWGCWC 1 cut(s) 938
Alw26I GTCTC 4 cut(s) 167, 360, 1158, 1614
AlwNI CAGNNNCTG 6 cut(s) 594, 947, 1132, 1267, 1701, 1738
Ama87I CYCGRG 1 cut(s) 1394
AoxI GGCC 4 cut(s) 943, 1093, 1313, 1740
ApeKI GCWGC 1 cut(s) 1607
ApoI RAATTY 3 cut(s) 19, 88, 536
ArsI GACNNNNNNTTYG 4 cut(s) 359, 391, 772, 804
Asp700I GAANNNNTTC 1 cut(s) 1112
AspLEI GCGC 4 cut(s) 663, 724, 1131, 1393
AspS9I GGNCC 4 cut(s) 788, 944, 1264, 1735
AsuC2I CCSGG 1 cut(s) 1628
AsuHPI GGTGA 3 cut(s) 572, 767, 1492
AvaI CYCGRG 1 cut(s) 1394
AvaII GGWCC 3 cut(s) 788, 1264, 1735
BaeGI GKGCMC 1 cut(s) 1177
BaeI ACNNNNGTAYC 2 cut(s) 894, 927
BalI TGGCCA 1 cut(s) 1742
BanI GGYRCC 1 cut(s) 660
BanII GRGCYC 1 cut(s) 938
BbsI GAAGAC 1 cut(s) 1181
Bbv12I GWGCWC 1 cut(s) 938
BbvCI CCTCAGC 1 cut(s) 1169
BbvI GCAGC 1 cut(s) 1619
BccI CCATC 6 cut(s) 448, 569, 706, 893, 961, 1212
BceAI ACGGC 1 cut(s) 648
BciT130I CCWGG 5 cut(s) 1133, 1262, 1448, 1696, 1739
BciVI GTATCC 1 cut(s) 1390
BclI TGATCA 2 cut(s) 619, 1422
BcnI CCSGG 1 cut(s) 1628
BcoDI GTCTC 4 cut(s) 167, 360, 1158, 1614
BfaI CTAG 4 cut(s) 33, 501, 516, 531
BfmI CTRYAG 1 cut(s) 939
BfoI RGCGCY 3 cut(s) 664, 1132, 1394
BfuI GTATCC 1 cut(s) 1390
BisI GCNGC 3 cut(s) 809, 1093, 1608
BlpI GCTNAGC 1 cut(s) 932
BlsI GCNGC 3 cut(s) 810, 1094, 1609
Bme1390I CCNGG 6 cut(s) 1133, 1262, 1448, 1628, 1696, 1739
Bme18I GGWCC 3 cut(s) 788, 1264, 1735
BmeRI GACNNNNNGTC 1 cut(s) 352
BmeT110I CYCGRG 1 cut(s) 1394
BmgT120I GGNCC 4 cut(s) 788, 944, 1264, 1735
BmiI GGNNCC 2 cut(s) 662, 1257
BmrFI CCNGG 6 cut(s) 1133, 1262, 1448, 1628, 1696, 1739
BmrI ACTGGG 1 cut(s) 1512
BmsI GCATC 7 cut(s) 22, 281, 441, 536, 614, 1092, 1668
BmuI ACTGGG 1 cut(s) 1512
BpiI GAAGAC 1 cut(s) 1181
Bpu10I CCTNAGC 2 cut(s) 948, 1169
Bpu1102I GCTNAGC 1 cut(s) 932
BpuMI CCSGG 1 cut(s) 1628
Bsa29I ATCGAT 1 cut(s) 760
BsaBI GATNNNNATC 1 cut(s) 330
BsaHI GRCGYC 1 cut(s) 661
BsaJI CCNNGG 5 cut(s) 957, 1260, 1272, 1383, 1447
Bsc4I CCNNNNNNNGG 6 cut(s) 52, 267, 268, 1243, 1273, 1701
Bse1I ACTGG 1 cut(s) 1507
Bse3DI GCAATG 1 cut(s) 1617
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 5 cut(s) 1133, 1262, 1448, 1696, 1739
BseCI ATCGAT 1 cut(s) 760
BseDI CCNNGG 5 cut(s) 957, 1260, 1272, 1383, 1447
BseGI GGATG 8 cut(s) 70, 272, 295, 391, 456, 953, 1223, 1580
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 6 cut(s) 52, 267, 268, 1243, 1273, 1701
BseMI GCAATG 1 cut(s) 1617
BseMII CTCAG 7 cut(s) 63, 923, 939, 957, 1139, 1160, 1304
BseNI ACTGG 1 cut(s) 1507
BseRI GAGGAG 3 cut(s) 434, 983, 1646
BseSI GKGCMC 1 cut(s) 1177
BseX3I CGGCCG 1 cut(s) 1093
BseXI GCAGC 1 cut(s) 1619
Bsh1236I CGCG 1 cut(s) 1517
Bsh1285I CGRYCG 1 cut(s) 1096
BshFI GGCC 4 cut(s) 945, 1095, 1315, 1742
BshNI GGYRCC 1 cut(s) 660
BshVI ATCGAT 1 cut(s) 760
BsiEI CGRYCG 1 cut(s) 1096
BsiHKAI GWGCWC 1 cut(s) 938
BsiHKCI CYCGRG 1 cut(s) 1394
BsiSI CCGG 1 cut(s) 1628
BslFI GGGAC 2 cut(s) 1217, 1526
BslI CCNNNNNNNGG 6 cut(s) 52, 267, 268, 1243, 1273, 1701
BsmAI GTCTC 4 cut(s) 167, 360, 1158, 1614
BsmFI GGGAC 2 cut(s) 1217, 1526
BsmI GAATGC 2 cut(s) 408, 730
BsnI GGCC 4 cut(s) 945, 1095, 1315, 1742
BsoBI CYCGRG 1 cut(s) 1394
Bsp1286I GDGCHC 2 cut(s) 938, 1177
Bsp1407I TGTACA 1 cut(s) 596
Bsp143I GATC 3 cut(s) 619, 757, 1422
Bsp1720I GCTNAGC 1 cut(s) 932
Bsp19I CCATGG 1 cut(s) 1383
BspACI CCGC 4 cut(s) 191, 809, 1092, 1517
BspANI GGCC 4 cut(s) 945, 1095, 1315, 1742
BspCNI CTCAG 7 cut(s) 64, 924, 940, 958, 1138, 1161, 1303
BspDI ATCGAT 1 cut(s) 760
BspFNI CGCG 1 cut(s) 1517
BspHI TCATGA 2 cut(s) 622, 667
BspLI GGNNCC 2 cut(s) 662, 1257
BspMAI CTGCAG 1 cut(s) 943
BspT107I GGYRCC 1 cut(s) 660
BsrDI GCAATG 1 cut(s) 1617
BsrGI TGTACA 1 cut(s) 596
BsrI ACTGG 1 cut(s) 1507
BssECI CCNNGG 5 cut(s) 957, 1260, 1272, 1383, 1447
BssMI GATC 3 cut(s) 619, 757, 1422
BssNI GRCGYC 1 cut(s) 661
BssT1I CCWWGG 2 cut(s) 1272, 1383
Bst2UI CCWGG 5 cut(s) 1133, 1262, 1448, 1696, 1739
Bst4CI ACNGT 6 cut(s) 188, 635, 1228, 1246, 1418, 1708
Bst6I CTCTTC 2 cut(s) 157, 558
BstACI GRCGYC 1 cut(s) 661
BstAPI GCANNNNNTGC 1 cut(s) 1089
BstAUI TGTACA 1 cut(s) 596
BstC8I GCNNGC 4 cut(s) 943, 1454, 1458, 1575
BstDEI CTNAG 9 cut(s) 72, 642, 932, 948, 966, 1125, 1169, 1290, 1406
BstDSI CCRYGG 1 cut(s) 1383
BstENI CCTNNNNNAGG 1 cut(s) 1271
BstF5I GGATG 8 cut(s) 70, 272, 295, 391, 456, 953, 1223, 1580
BstFNI CGCG 1 cut(s) 1517
BstH2I RGCGCY 3 cut(s) 664, 1132, 1394
BstHHI GCGC 4 cut(s) 663, 724, 1131, 1393
BstKTI GATC 3 cut(s) 622, 760, 1425
BstMAI GTCTC 4 cut(s) 167, 360, 1158, 1614
BstMBI GATC 3 cut(s) 619, 757, 1422
BstMCI CGRYCG 1 cut(s) 1096
BstMWI GCNNNNNNNGC 5 cut(s) 808, 942, 1089, 1098, 1397
BstNI CCWGG 5 cut(s) 1133, 1262, 1448, 1696, 1739
BstNSI RCATGY 2 cut(s) 221, 1145
BstSCI CCNGG 6 cut(s) 1131, 1260, 1446, 1626, 1694, 1737
BstSFI CTRYAG 1 cut(s) 939
BstSLI GKGCMC 1 cut(s) 1177
BstUI CGCG 1 cut(s) 1517
BstV1I GCAGC 1 cut(s) 1619
BstV2I GAAGAC 1 cut(s) 1181
BstZI CGGCCG 1 cut(s) 1093
Bsu15I ATCGAT 1 cut(s) 760
BsuI GTATCC 1 cut(s) 1390
BsuRI GGCC 4 cut(s) 945, 1095, 1315, 1742
BsuTUI ATCGAT 1 cut(s) 760
BtgI CCRYGG 1 cut(s) 1383
BtsCI GGATG 8 cut(s) 70, 272, 295, 391, 456, 953, 1223, 1580
BtsIMutI CAGTG 1 cut(s) 816
Cac8I GCNNGC 4 cut(s) 943, 1454, 1458, 1575
CaiI CAGNNNCTG 6 cut(s) 594, 947, 1132, 1267, 1701, 1738
CciI TCATGA 2 cut(s) 622, 667
CfoI GCGC 4 cut(s) 663, 724, 1131, 1393
Cfr13I GGNCC 4 cut(s) 788, 944, 1264, 1735
ClaI ATCGAT 1 cut(s) 760
CseI GACGC 2 cut(s) 219, 1523
Csp6I GTAC 5 cut(s) 489, 597, 903, 1071, 1224
CviAII CATG 8 cut(s) 218, 623, 668, 866, 890, 1117, 1142, 1384
CviQI GTAC 5 cut(s) 489, 597, 903, 1071, 1224
DdeI CTNAG 9 cut(s) 72, 642, 932, 948, 966, 1125, 1169, 1290, 1406
DinI GGCGCC 1 cut(s) 662
DpnI GATC 3 cut(s) 621, 759, 1424
DpnII GATC 3 cut(s) 619, 757, 1422
DriI GACNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 2 cut(s) 1093, 1740
EagI CGGCCG 1 cut(s) 1093
Eam1104I CTCTTC 2 cut(s) 157, 558
Eam1105I GACNNNNNGTC 1 cut(s) 352
EarI CTCTTC 2 cut(s) 157, 558
Ecl136II GAGCTC 1 cut(s) 936
EclXI CGGCCG 1 cut(s) 1093
Eco130I CCWWGG 2 cut(s) 1272, 1383
Eco24I GRGCYC 1 cut(s) 938
Eco47I GGWCC 3 cut(s) 788, 1264, 1735
Eco52I CGGCCG 1 cut(s) 1093
Eco53kI GAGCTC 1 cut(s) 936
Eco57I CTGAAG 2 cut(s) 356, 495
Eco88I CYCGRG 1 cut(s) 1394
EcoICRI GAGCTC 1 cut(s) 936
EcoNI CCTNNNNNAGG 1 cut(s) 1271
EcoO109I RGGNCCY 3 cut(s) 944, 1264, 1735
EcoRI GAATTC 1 cut(s) 536
EcoRII CCWGG 5 cut(s) 1131, 1260, 1446, 1694, 1737
EcoT14I CCWWGG 2 cut(s) 1272, 1383
EcoT22I ATGCAT 1 cut(s) 1147
EcoT38I GRGCYC 1 cut(s) 938
EgeI GGCGCC 1 cut(s) 662
EheI GGCGCC 1 cut(s) 662
ErhI CCWWGG 2 cut(s) 1272, 1383
FaeI CATG 8 cut(s) 221, 626, 671, 869, 893, 1120, 1145, 1387
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FaqI GGGAC 2 cut(s) 1217, 1526
FatI CATG 8 cut(s) 217, 622, 667, 865, 889, 1116, 1141, 1383
FauNDI CATATG 1 cut(s) 483
FbaI TGATCA 2 cut(s) 619, 1422
Fnu4HI GCNGC 3 cut(s) 809, 1093, 1608
FokI GGATG 8 cut(s) 77, 259, 282, 378, 463, 940, 1230, 1567
FriOI GRGCYC 1 cut(s) 938
Fsp4HI GCNGC 3 cut(s) 809, 1093, 1608
FspBI CTAG 4 cut(s) 33, 501, 516, 531
FspI TGCGCA 1 cut(s) 723
GlaI GCGC 4 cut(s) 662, 723, 1130, 1392
GluI GCNGC 3 cut(s) 809, 1093, 1608
HaeII RGCGCY 3 cut(s) 664, 1132, 1394
HaeIII GGCC 4 cut(s) 945, 1095, 1315, 1742
HapII CCGG 1 cut(s) 1628
HgaI GACGC 2 cut(s) 219, 1523
HhaI GCGC 4 cut(s) 663, 724, 1131, 1393
Hin1I GRCGYC 1 cut(s) 661
Hin1II CATG 8 cut(s) 221, 626, 671, 869, 893, 1120, 1145, 1387
Hin6I GCGC 4 cut(s) 661, 722, 1129, 1391
HinP1I GCGC 4 cut(s) 661, 722, 1129, 1391
HindIII AAGCTT 2 cut(s) 1099, 1281
HinfI GANTC 9 cut(s) 155, 331, 374, 741, 962, 1306, 1434, 1525, 1729
HpaII CCGG 1 cut(s) 1628
HphI GGTGA 3 cut(s) 572, 767, 1492
Hpy166II GTNNAC 5 cut(s) 389, 491, 838, 1333, 1500
Hpy8I GTNNAC 5 cut(s) 389, 491, 838, 1333, 1500
HpyAV CCTTC 4 cut(s) 225, 1102, 1288, 1366
HpyCH4III ACNGT 6 cut(s) 188, 635, 1228, 1246, 1418, 1708
HpyCH4IV ACGT 1 cut(s) 1496
HpyF10VI GCNNNNNNNGC 5 cut(s) 808, 942, 1089, 1098, 1397
HpyF3I CTNAG 9 cut(s) 72, 642, 932, 948, 966, 1125, 1169, 1290, 1406
HpySE526I ACGT 1 cut(s) 1496
Hsp92I GRCGYC 1 cut(s) 661
Hsp92II CATG 8 cut(s) 221, 626, 671, 869, 893, 1120, 1145, 1387
HspAI GCGC 4 cut(s) 661, 722, 1129, 1391
KasI GGCGCC 1 cut(s) 660
Ksp22I TGATCA 2 cut(s) 619, 1422
Kzo9I GATC 3 cut(s) 619, 757, 1422
LmnI GCTCC 4 cut(s) 421, 1633, 1698, 1753
Lsp1109I GCAGC 1 cut(s) 1619
LweI GCATC 7 cut(s) 22, 281, 441, 536, 614, 1092, 1668
MaeI CTAG 4 cut(s) 33, 501, 516, 531
MaeII ACGT 1 cut(s) 1496
MaeIII GTNAC 3 cut(s) 1135, 1246, 1412
MalI GATC 3 cut(s) 621, 759, 1424
MboI GATC 3 cut(s) 619, 757, 1422
MboII GAAGA 9 cut(s) 174, 317, 488, 575, 893, 1056, 1181, 1310, 1443
MhlI GDGCHC 2 cut(s) 938, 1177
MlsI TGGCCA 1 cut(s) 1742
MluCI AATT 6 cut(s) 19, 88, 223, 536, 1323, 1596
MluNI TGGCCA 1 cut(s) 1742
Mly113I GGCGCC 1 cut(s) 661
MlyI GAGTC 2 cut(s) 383, 956
MmeI TCCRAC 1 cut(s) 1349
Mox20I TGGCCA 1 cut(s) 1742
Mph1103I ATGCAT 1 cut(s) 1147
MroXI GAANNNNTTC 1 cut(s) 1112
MscI TGGCCA 1 cut(s) 1742
MseI TTAA 3 cut(s) 140, 794, 1001
MslI CAYNNNNRTG 2 cut(s) 894, 1551
Msp20I TGGCCA 1 cut(s) 1742
MspA1I CMGCKG 1 cut(s) 611
MspI CCGG 1 cut(s) 1628
MspR9I CCNGG 6 cut(s) 1133, 1262, 1448, 1628, 1696, 1739
Mva1269I GAATGC 2 cut(s) 408, 730
MvaI CCWGG 5 cut(s) 1133, 1262, 1448, 1696, 1739
MvnI CGCG 1 cut(s) 1517
MwoI GCNNNNNNNGC 5 cut(s) 808, 942, 1089, 1098, 1397
NarI GGCGCC 1 cut(s) 661
NciI CCSGG 1 cut(s) 1628
NcoI CCATGG 1 cut(s) 1383
NdeI CATATG 1 cut(s) 483
NdeII GATC 3 cut(s) 619, 757, 1422
NlaIII CATG 8 cut(s) 221, 626, 671, 869, 893, 1120, 1145, 1387
NlaIV GGNNCC 2 cut(s) 662, 1257
NmeAIII GCCGAG 1 cut(s) 1010
NmuCI GTSAC 1 cut(s) 1246
NsbI TGCGCA 1 cut(s) 723
NsiI ATGCAT 1 cut(s) 1147
NspI RCATGY 2 cut(s) 221, 1145
PaeR7I CTCGAG 1 cut(s) 1394
PagI TCATGA 2 cut(s) 622, 667
PciI ACATGT 1 cut(s) 217
PctI GAATGC 2 cut(s) 408, 730
PdmI GAANNNNTTC 1 cut(s) 1112
PfeI GAWTC 7 cut(s) 155, 331, 741, 1306, 1434, 1525, 1729
PflFI GACNNNGTC 1 cut(s) 1244
PflMI CCANNNNNTGG 1 cut(s) 1701
PkrI GCNGC 3 cut(s) 810, 1094, 1609
PleI GAGTC 2 cut(s) 382, 956
PluTI GGCGCC 1 cut(s) 664
PpsI GAGTC 2 cut(s) 382, 956
PpuMI RGGWCCY 2 cut(s) 1264, 1735
PscI ACATGT 1 cut(s) 217
Psp124BI GAGCTC 1 cut(s) 938
Psp1406I AACGTT 1 cut(s) 1496
Psp5II RGGWCCY 2 cut(s) 1264, 1735
Psp6I CCWGG 5 cut(s) 1131, 1260, 1446, 1694, 1737
PspGI CCWGG 5 cut(s) 1131, 1260, 1446, 1694, 1737
PspN4I GGNNCC 2 cut(s) 662, 1257
PspPI GGNCC 4 cut(s) 788, 944, 1264, 1735
PspPPI RGGWCCY 2 cut(s) 1264, 1735
PspXI VCTCGAGB 1 cut(s) 1394
PstI CTGCAG 1 cut(s) 943
PstNI CAGNNNCTG 6 cut(s) 594, 947, 1132, 1267, 1701, 1738
PsyI GACNNNGTC 1 cut(s) 1244
PvuII CAGCTG 1 cut(s) 611
RsaI GTAC 5 cut(s) 490, 598, 904, 1072, 1225
RsaNI GTAC 5 cut(s) 489, 597, 903, 1071, 1224
RseI CAYNNNNRTG 2 cut(s) 894, 1551
SacI GAGCTC 1 cut(s) 938
SaqAI TTAA 3 cut(s) 140, 794, 1001
SatI GCNGC 3 cut(s) 809, 1093, 1608
Sau3AI GATC 3 cut(s) 619, 757, 1422
Sau96I GGNCC 4 cut(s) 788, 944, 1264, 1735
SchI GAGTC 2 cut(s) 383, 956
ScrFI CCNGG 6 cut(s) 1133, 1262, 1448, 1628, 1696, 1739
SduI GDGCHC 2 cut(s) 938, 1177
SfaNI GCATC 7 cut(s) 22, 281, 441, 536, 614, 1092, 1668
SfcI CTRYAG 1 cut(s) 939
SfoI GGCGCC 1 cut(s) 662
Sfr274I CTCGAG 1 cut(s) 1394
SinI GGWCC 3 cut(s) 788, 1264, 1735
SlaI CTCGAG 1 cut(s) 1394
SmiMI CAYNNNNRTG 2 cut(s) 894, 1551
SmlI CTYRAG 1 cut(s) 1394
SmoI CTYRAG 1 cut(s) 1394
Sse9I AATT 6 cut(s) 19, 88, 223, 536, 1323, 1596
SsiI CCGC 4 cut(s) 191, 809, 1092, 1517
SspDI GGCGCC 1 cut(s) 660
SspI AATATT 2 cut(s) 197, 1339
SspMI CTAG 4 cut(s) 33, 501, 516, 531
SstI GAGCTC 1 cut(s) 938
StyD4I CCNGG 6 cut(s) 1131, 1260, 1446, 1626, 1694, 1737
StyI CCWWGG 2 cut(s) 1272, 1383
TaaI ACNGT 6 cut(s) 188, 635, 1228, 1246, 1418, 1708
TaiI ACGT 1 cut(s) 1499
TaqI TCGA 4 cut(s) 760, 778, 1106, 1395
TasI AATT 6 cut(s) 19, 88, 223, 536, 1323, 1596
TatI WGTACW 2 cut(s) 488, 596
TauI GCSGC 2 cut(s) 811, 1095
TfiI GAWTC 7 cut(s) 155, 331, 741, 1306, 1434, 1525, 1729
Tru1I TTAA 3 cut(s) 140, 794, 1001
Tru9I TTAA 3 cut(s) 140, 794, 1001
TscAI CASTG 1 cut(s) 823
TseFI GTSAC 1 cut(s) 1246
TseI GCWGC 1 cut(s) 1607
Tsp45I GTSAC 1 cut(s) 1246
TspDTI ATGAA 8 cut(s) 56, 267, 450, 687, 693, 1005, 1040, 1105
TspRI CASTG 1 cut(s) 823
Tth111I GACNNNGTC 1 cut(s) 1244
Van91I CCANNNNNTGG 1 cut(s) 1701
VpaK11BI GGWCC 3 cut(s) 788, 1264, 1735
XagI CCTNNNNNAGG 1 cut(s) 1271
XapI RAATTY 3 cut(s) 19, 88, 536
XbaI TCTAGA 1 cut(s) 530
XceI RCATGY 2 cut(s) 221, 1145
XcmI CCANNNNNNNNNTGG 1 cut(s) 896
XhoI CTCGAG 1 cut(s) 1394
XmnI GAANNNNTTC 1 cut(s) 1112
XspI CTAG 4 cut(s) 33, 501, 516, 531
Zsp2I ATGCAT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.