Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000813.1

Orthogroup ID

OG0009713

Physical Location & Seq

Genomic Coordinates Forward (+)

53333 .. 58454

Gene Structure 5122 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000813.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

atgcaacctaggaggcacgagagtttcaatagacagcagcctccggcttctaaattacgtcccacctaccgattcgaatccggtgccaacaaccacccttatagtagtggtagtaggaggagacctgaggaggtacatcggaatattaggaggagtttgagcccgcaacaagatcatttgggtgtcagtcaaaggaatgttgcttctattcagagggagtatggctggcatttgggtggcggtaggactgatggcgtccgccgcaggtcaacatccgggtcacccctactgccttttggtgaaatgcgaaaaatgacacaatttgaggaggaggaggaggaggaggatggggatttgcggaggagttattcaccaccaccacaaccaccggtacctgttccggcatctgttcctttggagttaaaacacagacgtgatagcgttgaggctggaaattatagtgtcaatgatgatttgaatagtaggagagtttatggctccgagcataatgattttggaatcagtaaagaagatttgaatgaaagcagattgacagctggtggtaaacatgggacattgggtcaaaaaccaatccatatggaagatagtgctgtaagaggatccaaaaccatgtttatcaaaggtgacaccgtgcatggagcatatcattcttctccaagccttggtactgttataactcaaggagcaaggggtggccacctaccatcatcaacgcgcagcatgagcatacgccattctgaccaagaaaggcttcagtatgcagaccctatatctttggatagattaccagtgacagaagcctacaaagaaggaaataaacccgtttttcctacaagagatggcttttattccatgatgtctggatctcattccaagaattattttgctagctcctcaacagggttgaggaatgaattccaagattcctatcagcatgagcagcatatgccttctttggaagaattttcaagaagtagtagaaaacttaaagattctgtgagcattaatgcatatagggaaaggccggttgtagagttttctcgagaccctgattctgggcagaagaatctgacattttaccagagagatagtcctactagagttgagtatgatgatgattattatttctacccaaactcaagaggaatgatatttgacgatcgtgagcttccatctgatcacttacacaaagtgatgcatccacgagcaccacttgactatgaccattctcggatgggttatgatcatagaactgtgtcaagatctagtaccatgctccctgttgtggaaagaattgataatactgaggattattctggaaattcaaggaagcgcattatgctgaataattctactttagaaaggcatacactttcagactaccctgatataagcagaatatcaagtgcatcaaagcagagtggagaatatatgggttctggacgcatgcatgacaagtttggaaggagaatttcacaagattatgaaacatcgcatttgggtgcagcgcaagtttgtcaaatctcacatctgaaagaagattatggttatgaaagagatggaaacctgaagtttcaggacagacagtgtcctgtgtctaaatacgacccagaaatgcatagaaatacgattagaatgcagagtatgagagacaagcttggggtatatgaaccatcagatagggtggtgaaaagaaaatatgttaatgaagagcatggaagtatccagaatcctagagaaattatgtcaggtaaatggaatacctctagagagtttcaagatttgtatgatagtggtgaagagtggaatggtgaagatgtaggatctatgtatacatctagatcagcaagattgggccataatgaacactataaggcccagaggaaatatgctggaatagaccagtatgatgaatttgtatctgatgatcgcctgccgtctcaagactcgttggcagatgcacaaaggcactcagttagatattataaacatggtgatcggtatgccaagggtcaccaaaactatggttcattaagtaggcataggtcacagcaagttgacataaaaagtggctttcacaaacagcacaaggtttggaagagaaatgataattatctagaggatgtccacagaggtgatgataatgatgctgatacatcagaaaatgggttgagttctgcagctcctgagccatcagaggattctgaggagtttatgcaattggtacaagaagccttcctaacatactctaaacaattaaatatgaaccctggtgttcggagaagatacatggaacaaggaaaggctgggactttattctgcatcgtatgtggccgaagctactcgaaggagttcatggacacccaacgattggtaacacatgcatttatgtctaaaaaagctggattgaggacacaacacttgggacttctcaaagcagtttgtgctctgttggggtggagtactgttatccccactgacatagtactatgggttccccaggtcttgcccaaggcagaagctttggctcagaaggaagatttgattctttggcctccagtgattattatccacaatatttctatgtcagacaacaatcctgaaaattggaaggttgtaagcattgaagctctggaggcttttctaagaggtaaaggtttaattaggggaagaatcaagatgtgcctggggaagcctgctgatcaaagtgttgtgttggtgaagttcttgggaactttcactgggcttgggaatgcagagaggattcataagtattttgcagagcagaaccgtggcagagcagactttgagcgagcaacgtccaacaacggaaaaattgtggaagcaggaatgcagggagacagtgtggaggagcgatttttacatggatatatggggattgcggaggacttagataaagtagattttaataccaggaactggagtttgataaagagcaagaaggagattcaggacctggccaatgctcctgttaaaccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

1007

Amino Acids

115.15

Weight (kDa)

8.0

Isoelectric Point (pI)

61.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009713)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05850 FvH4_7g05850 FvH4_7g05850
malus_domestica	MD02G1254600.v1.1 MD07G1067200.v1.1
prunus_persica	Prupe.2G084400_v2.0.a1 Prupe.2G084400_v2.0.a1
pyrus_communis	pycom02g21450 pycom07g05140
rosa_chinensis	RchiOBHm_Chr1g0332961
rosa_laevigata	RLG00000029630
rosa_multiflora	Rmu_co8522447.1_g000002 Rmu_sc0000117.1_g000033 Rmu_sc0000813.1_g000010
rosa_roxburghii	Rroxscaffold_4G00317840
rosa_rugosa	Rorug01G0106200
rosa_samantha	Rh1AG129400 Rh1BG098600 Rh1CG123300 Rh1DG135200
rosa_wichuraiana	Rw0G014350 Rw1G010360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	695, 2007
Acc36I	ACCTGC	1 cut(s)	255
Acc65I	GGTACC	1 cut(s)	391
AccB1I	GGYRCC	2 cut(s)	83, 391
AccB7I	CCANNNNNTGG	3 cut(s)	683, 2392, 2961
AccI	GTMKAC	1 cut(s)	1853
AccII	CGCG	1 cut(s)	736
AciI	CCGC	6 cut(s)	164, 240, 259, 262, 358, 2924
AclWI	GGATC	4 cut(s)	615, 628, 892, 1852
AcoI	YGGCCR	3 cut(s)	715, 2353, 3000
AcsI	RAATTY	5 cut(s)	935, 983, 1342, 1491, 1934
AcuI	CTGAAG	2 cut(s)	758, 1610
AcyI	GRCGYC	1 cut(s)	255
AdeI	CACNNNGTG	1 cut(s)	1213
AfaI	GTAC	7 cut(s)	135, 393, 688, 1291, 2247, 2485, 2508
AfiI	CCNNNNNNNGG	6 cut(s)	683, 921, 1076, 1306, 2392, 2961
AgeI	ACCGGT	1 cut(s)	388
AgsI	TTSAA	7 cut(s)	28, 478, 538, 990, 1347, 1799, 2648
AhdI	GACNNNNNGTC	1 cut(s)	579
AjiI	CACGTC	1 cut(s)	434
AjnI	CCWGG	5 cut(s)	2290, 2520, 2706, 2954, 2997
AjuI	GAANNNNNNNTTGG	2 cut(s)	756, 788
AleI	CACNNNNGTG	2 cut(s)	432, 2154
AluBI	AGCT	9 cut(s)	557, 912, 1189, 1678, 2204, 2361, 2423, 2543, 2651
AluI	AGCT	9 cut(s)	557, 912, 1189, 1678, 2204, 2361, 2423, 2543, 2651
Alw21I	GWGCWC	2 cut(s)	1231, 2470
Alw26I	GTCTC	5 cut(s)	115, 1059, 1665, 1965, 2874
AlwI	GGATC	4 cut(s)	615, 628, 892, 1852
AlwNI	CAGNNNCTG	3 cut(s)	2207, 2961, 2998
Ama87I	CYCGRG	1 cut(s)	1062
AoxI	GGCC	7 cut(s)	715, 1043, 1876, 1896, 2353, 2573, 3000
ApeKI	GCWGC	5 cut(s)	37, 738, 961, 1526, 2201
ApoI	RAATTY	5 cut(s)	935, 983, 1342, 1491, 1934
AseI	ATTAAT	1 cut(s)	1026
AsiGI	ACCGGT	1 cut(s)	388
Asp700I	GAANNNNTTC	3 cut(s)	771, 935, 2372
Asp718I	GGTACC	1 cut(s)	391
AspA2I	CCTAGG	1 cut(s)	8
AspLEI	GCGC	3 cut(s)	738, 1356, 1531
AspS9I	GGNCC	3 cut(s)	1876, 1897, 2995
AsuC2I	CCSGG	1 cut(s)	277
AsuII	TTCGAA	1 cut(s)	75
AsuNHI	GCTAGC	1 cut(s)	908
AvaI	CYCGRG	1 cut(s)	1062
AvaII	GGWCC	1 cut(s)	2995
AvrII	CCTAGG	1 cut(s)	8
AxyI	CCTNAGG	1 cut(s)	126
BalI	TGGCCA	2 cut(s)	717, 3002
BamHI	GGATCC	1 cut(s)	620
BanI	GGYRCC	2 cut(s)	83, 391
BanII	GRGCYC	1 cut(s)	164
BauI	CACGAG	2 cut(s)	17, 1224
Bbv12I	GWGCWC	2 cut(s)	1231, 2470
BbvI	GCAGC	5 cut(s)	49, 750, 973, 1538, 2213
BccI	CCATC	9 cut(s)	245, 341, 733, 854, 1201, 1249, 1574, 1702, 2221
BceAI	ACGGC	1 cut(s)	1942
BcgI	CGANNNNNNTGC	4 cut(s)	65, 99, 1639, 1673
BciT130I	CCWGG	5 cut(s)	2292, 2522, 2708, 2956, 2999
BciVI	GTATCC	1 cut(s)	1754
BclI	TGATCA	3 cut(s)	1198, 1264, 2722
BcnI	CCSGG	1 cut(s)	277
BcoDI	GTCTC	5 cut(s)	115, 1059, 1665, 1965, 2874
BfaI	CTAG	8 cut(s)	9, 909, 1119, 1287, 1755, 1788, 1860, 2138
BfmI	CTRYAG	1 cut(s)	2199
BfuAI	ACCTGC	1 cut(s)	255
BfuI	GTATCC	1 cut(s)	1754
BglII	AGATCT	1 cut(s)	1283
BisI	GCNGC	6 cut(s)	38, 262, 739, 962, 1527, 2202
BlnI	CCTAGG	1 cut(s)	8
BlsI	GCNGC	6 cut(s)	39, 263, 740, 963, 1528, 2203
BmcAI	AGTACT	2 cut(s)	2485, 2508
Bme1390I	CCNGG	6 cut(s)	277, 2292, 2522, 2708, 2956, 2999
Bme18I	GGWCC	1 cut(s)	2995
BmeRI	GACNNNNNGTC	1 cut(s)	579
BmeT110I	CYCGRG	1 cut(s)	1062
BmgBI	CACGTC	1 cut(s)	434
BmgT120I	GGNCC	3 cut(s)	1876, 1897, 2995
BmiI	GGNNCC	5 cut(s)	85, 393, 499, 622, 2517
BmrFI	CCNGG	6 cut(s)	277, 2292, 2522, 2708, 2956, 2999
BmrI	ACTGGG	1 cut(s)	2772
BmsI	GCATC	7 cut(s)	413, 1206, 1228, 1439, 1969, 2158, 2352
BmtI	GCTAGC	1 cut(s)	912
BmuI	ACTGGG	1 cut(s)	2772
BpmI	CTGGAG	3 cut(s)	2562, 2675, 2983
Bpu10I	CCTNAGC	1 cut(s)	2208
Bpu14I	TTCGAA	1 cut(s)	75
BpuEI	CTTGAG	3 cut(s)	684, 1144, 1947
BpuMI	CCSGG	1 cut(s)	277
BsaBI	GATNNNNATC	4 cut(s)	76, 948, 2133, 2588
BsaHI	GRCGYC	1 cut(s)	255
BsaI	GGTCTC	2 cut(s)	115, 1059
BsaJI	CCNNGG	8 cut(s)	8, 682, 2028, 2290, 2520, 2532, 2707, 2812
BsaWI	WCCGGW	2 cut(s)	80, 388
BsaXI	ACNNNNNCTCC	2 cut(s)	2871, 2901
Bsc4I	CCNNNNNNNGG	6 cut(s)	683, 921, 1076, 1306, 2392, 2961
Bse118I	RCCGGY	2 cut(s)	388, 1045
Bse1I	ACTGG	5 cut(s)	809, 1924, 2579, 2767, 2966
Bse21I	CCTNAGG	1 cut(s)	126
Bse8I	GATNNNNATC	4 cut(s)	76, 948, 2133, 2588
BseBI	CCWGG	5 cut(s)	2292, 2522, 2708, 2956, 2999
BseDI	CCNNGG	8 cut(s)	8, 682, 2028, 2290, 2520, 2532, 2707, 2812
BseGI	GGATG	5 cut(s)	272, 352, 1219, 1260, 2149
BseJI	GATNNNNATC	4 cut(s)	76, 948, 2133, 2588
BseLI	CCNNNNNNNGG	6 cut(s)	683, 921, 1076, 1306, 2392, 2961
BseMII	CTCAG	6 cut(s)	117, 1317, 2007, 2199, 2217, 2564
BseNI	ACTGG	5 cut(s)	809, 1924, 2579, 2767, 2966
BseXI	GCAGC	5 cut(s)	49, 750, 973, 1538, 2213
BseYI	CCCAGC	1 cut(s)	2327
BsgI	GTGCAG	1 cut(s)	1545
Bsh1236I	CGCG	1 cut(s)	736
Bsh1285I	CGRYCG	1 cut(s)	1183
BshFI	GGCC	7 cut(s)	717, 1045, 1878, 1898, 2355, 2575, 3002
BshNI	GGYRCC	2 cut(s)	83, 391
BshTI	ACCGGT	1 cut(s)	388
BsiEI	CGRYCG	1 cut(s)	1183
BsiHKAI	GWGCWC	2 cut(s)	1231, 2470
BsiHKCI	CYCGRG	1 cut(s)	1062
BsiSI	CCGG	6 cut(s)	44, 81, 276, 389, 401, 1046
BslFI	GGGAC	4 cut(s)	45, 586, 2344, 2460
BslI	CCNNNNNNNGG	6 cut(s)	683, 921, 1076, 1306, 2392, 2961
BsmAI	GTCTC	5 cut(s)	115, 1059, 1665, 1965, 2874
BsmBI	CGTCTC	1 cut(s)	1965
BsmFI	GGGAC	4 cut(s)	45, 586, 2344, 2460
BsmI	GAATGC	3 cut(s)	1662, 2779, 2877
BsnI	GGCC	7 cut(s)	717, 1045, 1878, 1898, 2355, 2575, 3002
Bso31I	GGTCTC	2 cut(s)	115, 1059
BsoBI	CYCGRG	1 cut(s)	1062
Bsp119I	TTCGAA	1 cut(s)	75
Bsp1286I	GDGCHC	3 cut(s)	164, 1231, 2470
BspACI	CCGC	6 cut(s)	164, 240, 259, 262, 358, 2924
BspANI	GGCC	7 cut(s)	717, 1045, 1878, 1898, 2355, 2575, 3002
BspCNI	CTCAG	6 cut(s)	118, 1318, 2006, 2200, 2218, 2563
BspFNI	CGCG	1 cut(s)	736
BspLI	GGNNCC	5 cut(s)	85, 393, 499, 622, 2517
BspMAI	CTGCAG	1 cut(s)	2203
BspMI	ACCTGC	1 cut(s)	255
BspOI	GCTAGC	1 cut(s)	912
BspPI	GGATC	4 cut(s)	615, 628, 892, 1852
BspQI	GCTCTTC	1 cut(s)	1725
BspT104I	TTCGAA	1 cut(s)	75
BspT107I	GGYRCC	2 cut(s)	83, 391
BspTNI	GGTCTC	2 cut(s)	115, 1059
BsrFI	RCCGGY	2 cut(s)	388, 1045
BsrI	ACTGG	5 cut(s)	809, 1924, 2579, 2767, 2966
BssAI	RCCGGY	2 cut(s)	388, 1045
BssECI	CCNNGG	8 cut(s)	8, 682, 2028, 2290, 2520, 2532, 2707, 2812
BssNAI	GTATAC	1 cut(s)	1854
BssNI	GRCGYC	1 cut(s)	255
BssSI	CACGAG	2 cut(s)	17, 1224
BssT1I	CCWWGG	4 cut(s)	8, 682, 2028, 2532
Bst1107I	GTATAC	1 cut(s)	1854
Bst2BI	CACGAG	2 cut(s)	17, 1224
Bst2UI	CCWGG	5 cut(s)	2292, 2522, 2708, 2956, 2999
Bst4CI	ACNGT	7 cut(s)	652, 691, 1276, 1608, 2488, 2813, 2885
Bst6I	CTCTTC	3 cut(s)	1725, 1815, 2114
BstACI	GRCGYC	1 cut(s)	255
BstAPI	GCANNNNNTGC	2 cut(s)	967, 2465
BstBI	TTCGAA	1 cut(s)	75
BstC8I	GCNNGC	7 cut(s)	164, 227, 910, 1469, 1955, 2718, 2835
BstDEI	CTNAG	8 cut(s)	126, 1326, 1993, 2208, 2226, 2550, 2666, 2932
BstDSI	CCRYGG	1 cut(s)	2812
BstEII	GGTNACC	2 cut(s)	279, 2033
BstF5I	GGATG	5 cut(s)	272, 352, 1219, 1260, 2149
BstFNI	CGCG	1 cut(s)	736
BstHHI	GCGC	3 cut(s)	738, 1356, 1531
BstMAI	GTCTC	5 cut(s)	115, 1059, 1665, 1965, 2874
BstMCI	CGRYCG	1 cut(s)	1183
BstMWI	GCNNNNNNNGC	7 cut(s)	261, 744, 961, 967, 1360, 2465, 2657
BstNI	CCWGG	5 cut(s)	2292, 2522, 2708, 2956, 2999
BstNSI	RCATGY	2 cut(s)	1471, 2405
BstPI	GGTNACC	2 cut(s)	279, 2033
BstSCI	CCNGG	6 cut(s)	275, 2290, 2520, 2706, 2954, 2997
BstSFI	CTRYAG	1 cut(s)	2199
BstUI	CGCG	1 cut(s)	736
BstV1I	GCAGC	5 cut(s)	49, 750, 973, 1538, 2213
BstX2I	RGATCY	4 cut(s)	620, 884, 1283, 1844
BstXI	CCANNNNNNTGG	1 cut(s)	2045
BstYI	RGATCY	4 cut(s)	620, 884, 1283, 1844
BstZ17I	GTATAC	1 cut(s)	1854
Bsu36I	CCTNAGG	1 cut(s)	126
BsuI	GTATCC	1 cut(s)	1754
BsuRI	GGCC	7 cut(s)	717, 1045, 1878, 1898, 2355, 2575, 3002
BtgI	CCRYGG	1 cut(s)	2812
BtgZI	GCGATG	1 cut(s)	1497
BtrI	CACGTC	1 cut(s)	434
BtsCI	GGATG	5 cut(s)	272, 352, 1219, 1260, 2149
BtsIMutI	CAGTG	6 cut(s)	816, 1613, 2496, 2586, 2760, 2890
BveI	ACCTGC	1 cut(s)	255
Cac8I	GCNNGC	7 cut(s)	164, 227, 910, 1469, 1955, 2718, 2835
CaiI	CAGNNNCTG	3 cut(s)	2207, 2961, 2998
CfoI	GCGC	3 cut(s)	738, 1356, 1531
Cfr10I	RCCGGY	2 cut(s)	388, 1045
Cfr13I	GGNCC	3 cut(s)	1876, 1897, 2995
CseI	GACGC	2 cut(s)	244, 1473
Csp6I	GTAC	7 cut(s)	134, 392, 687, 1290, 2246, 2484, 2507
CspAI	ACCGGT	1 cut(s)	388
CviQI	GTAC	7 cut(s)	134, 392, 687, 1290, 2246, 2484, 2507
DdeI	CTNAG	8 cut(s)	126, 1326, 1993, 2208, 2226, 2550, 2666, 2932
DraIII	CACNNNGTG	1 cut(s)	1213
DriI	GACNNNNNGTC	1 cut(s)	579
EaeI	YGGCCR	3 cut(s)	715, 2353, 3000
Eam1104I	CTCTTC	3 cut(s)	1725, 1815, 2114
Eam1105I	GACNNNNNGTC	1 cut(s)	579
EarI	CTCTTC	3 cut(s)	1725, 1815, 2114
EciI	GGCGGA	1 cut(s)	248
Eco130I	CCWWGG	4 cut(s)	8, 682, 2028, 2532
Eco24I	GRGCYC	1 cut(s)	164
Eco31I	GGTCTC	2 cut(s)	115, 1059
Eco47I	GGWCC	1 cut(s)	2995
Eco57I	CTGAAG	2 cut(s)	758, 1610
Eco81I	CCTNAGG	1 cut(s)	126
Eco88I	CYCGRG	1 cut(s)	1062
Eco91I	GGTNACC	2 cut(s)	279, 2033
EcoO109I	RGGNCCY	1 cut(s)	2995
EcoO65I	GGTNACC	2 cut(s)	279, 2033
EcoRI	GAATTC	1 cut(s)	935
EcoRII	CCWGG	5 cut(s)	2290, 2520, 2706, 2954, 2997
EcoT14I	CCWWGG	4 cut(s)	8, 682, 2028, 2532
EcoT22I	ATGCAT	5 cut(s)	1033, 1221, 1473, 1641, 2407
EcoT38I	GRGCYC	1 cut(s)	164
ErhI	CCWWGG	4 cut(s)	8, 682, 2028, 2532
Esp3I	CGTCTC	1 cut(s)	1965
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	4 cut(s)	45, 586, 2344, 2460
FauI	CCCGC	1 cut(s)	171
FauNDI	CATATG	2 cut(s)	597, 966
FbaI	TGATCA	3 cut(s)	1198, 1264, 2722
FblI	GTMKAC	1 cut(s)	1853
Fnu4HI	GCNGC	6 cut(s)	38, 262, 739, 962, 1527, 2202
FokI	GGATG	5 cut(s)	259, 359, 1206, 1267, 2156
FriOI	GRGCYC	1 cut(s)	164
Fsp4HI	GCNGC	6 cut(s)	38, 262, 739, 962, 1527, 2202
FspBI	CTAG	8 cut(s)	9, 909, 1119, 1287, 1755, 1788, 1860, 2138
GlaI	GCGC	3 cut(s)	737, 1355, 1530
GluI	GCNGC	6 cut(s)	38, 262, 739, 962, 1527, 2202
GsaI	CCCAGC	1 cut(s)	2331
GsuI	CTGGAG	3 cut(s)	2562, 2675, 2983
HaeIII	GGCC	7 cut(s)	717, 1045, 1878, 1898, 2355, 2575, 3002
HapII	CCGG	6 cut(s)	44, 81, 276, 389, 401, 1046
HgaI	GACGC	2 cut(s)	244, 1473
HhaI	GCGC	3 cut(s)	738, 1356, 1531
Hin1I	GRCGYC	1 cut(s)	255
Hin6I	GCGC	3 cut(s)	736, 1354, 1529
HinP1I	GCGC	3 cut(s)	736, 1354, 1529
HincII	GTYRAC	2 cut(s)	270, 2080
HindII	GTYRAC	2 cut(s)	270, 2080
HindIII	AAGCTT	2 cut(s)	1676, 2541
HpaII	CCGG	6 cut(s)	44, 81, 276, 389, 401, 1046
Hpy166II	GTNNAC	5 cut(s)	270, 566, 1854, 2080, 2149
Hpy8I	GTNNAC	5 cut(s)	270, 566, 1854, 2080, 2149
HpyAV	CCTTC	8 cut(s)	824, 981, 1479, 2266, 2362, 2548, 2626, 2977
HpyCH4III	ACNGT	7 cut(s)	652, 691, 1276, 1608, 2488, 2813, 2885
HpyCH4IV	ACGT	3 cut(s)	58, 433, 2840
HpyF10VI	GCNNNNNNNGC	7 cut(s)	261, 744, 961, 967, 1360, 2465, 2657
HpyF3I	CTNAG	8 cut(s)	126, 1326, 1993, 2208, 2226, 2550, 2666, 2932
HpySE526I	ACGT	3 cut(s)	58, 433, 2840
Hsp92I	GRCGYC	1 cut(s)	255
HspAI	GCGC	3 cut(s)	736, 1354, 1529
KpnI	GGTACC	1 cut(s)	395
Ksp22I	TGATCA	3 cut(s)	1198, 1264, 2722
LguI	GCTCTTC	1 cut(s)	1725
LmnI	GCTCC	8 cut(s)	503, 659, 704, 917, 1302, 2209, 2893, 3013
Lsp1109I	GCAGC	5 cut(s)	49, 750, 973, 1538, 2213
LweI	GCATC	7 cut(s)	413, 1206, 1228, 1439, 1969, 2158, 2352
MaeI	CTAG	8 cut(s)	9, 909, 1119, 1287, 1755, 1788, 1860, 2138
MaeII	ACGT	3 cut(s)	58, 433, 2840
MaeIII	GTNAC	6 cut(s)	279, 644, 811, 2033, 2067, 2395
MfeI	CAATTG	1 cut(s)	2240
MflI	RGATCY	4 cut(s)	620, 884, 1283, 1844
MhlI	GDGCHC	3 cut(s)	164, 1231, 2470
MlsI	TGGCCA	2 cut(s)	717, 3002
MluNI	TGGCCA	2 cut(s)	717, 3002
MlyI	GAGTC	1 cut(s)	1961
MmeI	TCCRAC	1 cut(s)	2868
Mox20I	TGGCCA	2 cut(s)	717, 3002
Mph1103I	ATGCAT	5 cut(s)	1033, 1221, 1473, 1641, 2407
MroXI	GAANNNNTTC	3 cut(s)	771, 935, 2372
MscI	TGGCCA	2 cut(s)	717, 3002
MseI	TTAA	9 cut(s)	422, 1008, 1026, 1725, 2054, 2279, 2681, 2949, 3015
MslI	CAYNNNNRTG	5 cut(s)	180, 234, 432, 1521, 2154
Msp20I	TGGCCA	2 cut(s)	717, 3002
MspA1I	CMGCKG	1 cut(s)	557
MspI	CCGG	6 cut(s)	44, 81, 276, 389, 401, 1046
MspR9I	CCNGG	6 cut(s)	277, 2292, 2522, 2708, 2956, 2999
MunI	CAATTG	1 cut(s)	2240
Mva1269I	GAATGC	3 cut(s)	1662, 2779, 2877
MvaI	CCWGG	5 cut(s)	2292, 2522, 2708, 2956, 2999
MvnI	CGCG	1 cut(s)	736
MwoI	GCNNNNNNNGC	7 cut(s)	261, 744, 961, 967, 1360, 2465, 2657
NciI	CCSGG	1 cut(s)	277
NdeI	CATATG	2 cut(s)	597, 966
NheI	GCTAGC	1 cut(s)	908
NlaIV	GGNNCC	5 cut(s)	85, 393, 499, 622, 2517
NmuCI	GTSAC	5 cut(s)	279, 644, 811, 2033, 2067
NsiI	ATGCAT	5 cut(s)	1033, 1221, 1473, 1641, 2407
NspI	RCATGY	2 cut(s)	1471, 2405
NspV	TTCGAA	1 cut(s)	75
OliI	CACNNNNGTG	2 cut(s)	432, 2154
PaeI	GCATGC	1 cut(s)	1471
PaeR7I	CTCGAG	1 cut(s)	1062
PciSI	GCTCTTC	1 cut(s)	1725
PctI	GAATGC	3 cut(s)	1662, 2779, 2877
PdmI	GAANNNNTTC	3 cut(s)	771, 935, 2372
PflFI	GACNNNGTC	1 cut(s)	1608
PflMI	CCANNNNNTGG	3 cut(s)	683, 2392, 2961
PinAI	ACCGGT	1 cut(s)	388
PkrI	GCNGC	6 cut(s)	39, 263, 740, 963, 1528, 2203
Ple19I	CGATCG	1 cut(s)	1183
PleI	GAGTC	1 cut(s)	1961
PpsI	GAGTC	1 cut(s)	1961
PpuMI	RGGWCCY	1 cut(s)	2995
PshBI	ATTAAT	1 cut(s)	1026
PsiI	TTATAA	2 cut(s)	695, 2007
Psp5II	RGGWCCY	1 cut(s)	2995
Psp6I	CCWGG	5 cut(s)	2290, 2520, 2706, 2954, 2997
PspEI	GGTNACC	2 cut(s)	279, 2033
PspFI	CCCAGC	1 cut(s)	2327
PspGI	CCWGG	5 cut(s)	2290, 2520, 2706, 2954, 2997
PspN4I	GGNNCC	5 cut(s)	85, 393, 499, 622, 2517
PspPI	GGNCC	3 cut(s)	1876, 1897, 2995
PspPPI	RGGWCCY	1 cut(s)	2995
PsrI	GAACNNNNNNTAC	2 cut(s)	2499, 2531
PstI	CTGCAG	1 cut(s)	2203
PstNI	CAGNNNCTG	3 cut(s)	2207, 2961, 2998
PsuI	RGATCY	4 cut(s)	620, 884, 1283, 1844
PsyI	GACNNNGTC	1 cut(s)	1608
PvuI	CGATCG	1 cut(s)	1183
PvuII	CAGCTG	1 cut(s)	557
RsaI	GTAC	7 cut(s)	135, 393, 688, 1291, 2247, 2485, 2508
RsaNI	GTAC	7 cut(s)	134, 392, 687, 1290, 2246, 2484, 2507
RseI	CAYNNNNRTG	5 cut(s)	180, 234, 432, 1521, 2154
SapI	GCTCTTC	1 cut(s)	1725
SaqAI	TTAA	9 cut(s)	422, 1008, 1026, 1725, 2054, 2279, 2681, 2949, 3015
SatI	GCNGC	6 cut(s)	38, 262, 739, 962, 1527, 2202
Sau96I	GGNCC	3 cut(s)	1876, 1897, 2995
ScaI	AGTACT	2 cut(s)	2485, 2508
SchI	GAGTC	1 cut(s)	1961
ScrFI	CCNGG	6 cut(s)	277, 2292, 2522, 2708, 2956, 2999
SduI	GDGCHC	3 cut(s)	164, 1231, 2470
SfaNI	GCATC	7 cut(s)	413, 1206, 1228, 1439, 1969, 2158, 2352
SfcI	CTRYAG	1 cut(s)	2199
Sfr274I	CTCGAG	1 cut(s)	1062
SfuI	TTCGAA	1 cut(s)	75
SinI	GGWCC	1 cut(s)	2995
SlaI	CTCGAG	1 cut(s)	1062
SmiMI	CAYNNNNRTG	5 cut(s)	180, 234, 432, 1521, 2154
SmlI	CTYRAG	4 cut(s)	699, 1062, 1159, 1962
SmoI	CTYRAG	4 cut(s)	699, 1062, 1159, 1962
SphI	GCATGC	1 cut(s)	1471
SsiI	CCGC	6 cut(s)	164, 240, 259, 262, 358, 2924
SspI	AATATT	2 cut(s)	145, 2599
SspMI	CTAG	8 cut(s)	9, 909, 1119, 1287, 1755, 1788, 1860, 2138
StyD4I	CCNGG	6 cut(s)	275, 2290, 2520, 2706, 2954, 2997
StyI	CCWWGG	4 cut(s)	8, 682, 2028, 2532
TaaI	ACNGT	7 cut(s)	652, 691, 1276, 1608, 2488, 2813, 2885
TaiI	ACGT	3 cut(s)	61, 436, 2843
TaqI	TCGA	3 cut(s)	75, 1063, 2366
TatI	WGTACW	2 cut(s)	2483, 2506
TauI	GCSGC	1 cut(s)	264
Tru1I	TTAA	9 cut(s)	422, 1008, 1026, 1725, 2054, 2279, 2681, 2949, 3015
Tru9I	TTAA	9 cut(s)	422, 1008, 1026, 1725, 2054, 2279, 2681, 2949, 3015
TscAI	CASTG	6 cut(s)	816, 1613, 2503, 2586, 2767, 2890
TseFI	GTSAC	5 cut(s)	279, 644, 811, 2033, 2067
TseI	GCWGC	5 cut(s)	37, 738, 961, 1526, 2201
Tsp45I	GTSAC	5 cut(s)	279, 644, 811, 2033, 2067
TspGWI	ACGGA	1 cut(s)	2865
TspRI	CASTG	6 cut(s)	816, 1613, 2503, 2586, 2767, 2890
Tth111I	GACNNNGTC	1 cut(s)	1608
Van91I	CCANNNNNTGG	3 cut(s)	683, 2392, 2961
VpaK11BI	GGWCC	1 cut(s)	2995
VspI	ATTAAT	1 cut(s)	1026
XapI	RAATTY	5 cut(s)	935, 983, 1342, 1491, 1934
XbaI	TCTAGA	3 cut(s)	1787, 1859, 2137
XceI	RCATGY	2 cut(s)	1471, 2405
XhoI	CTCGAG	1 cut(s)	1062
XmaJI	CCTAGG	1 cut(s)	8
XmiI	GTMKAC	1 cut(s)	1853
XmnI	GAANNNNTTC	3 cut(s)	771, 935, 2372
XspI	CTAG	8 cut(s)	9, 909, 1119, 1287, 1755, 1788, 1860, 2138
ZrmI	AGTACT	2 cut(s)	2485, 2508
Zsp2I	ATGCAT	5 cut(s)	1033, 1221, 1473, 1641, 2407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.