Rh1CG123300

XS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0009713
Physical Location & Seq
Reverse (-)
26918078 .. 26923147
5070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG123300.1

Sequence Viewer

Length: 3036 bp
ATGCAACCTAGGAGGCACGAGAGTTTCAATAGACAGCAGCCTCCGGCTTCTAAATTACGTCCCACCTACCGATTCGAATCCGGTGCCAACAACCACCCTTATAGTAGTGGTAGTAGGAGGAGACCTGAGCAGGTACATCGGAATATTAGGAGGAGTTTGAGCCCGCAACAAGATCATCTGGGTGTCAGTCAAAGGAATGTTGCTTCTATTCAGAGGGAGTATGGCTGGCATTTGGGCAGCGGTGGTGGCGGTAGGACTGATGGCATCCGCCGCAGGTCAACATCCGGGTCACCCCGACTGCCTTTTGGTGAAATGCGAAAAATGTCACAATTTGAGGAGGAGGATGAGGATGGGGATTTGCGGAGGAGTTATTCACCACCACCACCACAACCACAACCACCGGTACCTGTTCCGGCATCTGTTCCTTTGGAGTTAAAACACAGACGTGATAGCGTTGAGGCTGGAAATTATAGTGTCAATGATGATTTGAATAGTAGGAGAGTTTATGGCTCCGAGCATAATGATTTTGGAATCAGTAAAGAAGATTTGAATGAAAGCAGATTGACAGCTGGTGGTAAACATGGGACATTGGGTCAAAAACCAATCCATATGGAAGATAGTGCTGTAAGAGGATCCAAAACCATGTTTATCAAAGGTGACACCGTGCATGGAGCATATCATTCTTCTCCAAGCCTTGGAACTGTTATGACTCAAGGAGCAAGGGGTGGCCACCTACCATCATCAACGCGCAGCATGAGTATACGTCATTCTGACCAAGAAAGGCTTCAGTATGCGGACCCTATATCTTTGGATAGATTACCAGTGACAGAAGCCTACAAAGAAGGAAATAAACCTGTTTTTCCTACAAGAGATGGCTTTTATTCCATGATGTCTGGATCTCATTCCAAGAATTATTTTGCTAGCTCCTCAACGGGGTTGAGGAATGAATTCCAAGATTCCTATCAGCATGAGCAGCATATGCCTTCTTTGGAAGAATTTTCAAGAAGTAGTAGAAAACTTAAAGATTCTGTGAGCATTAATGCATATAGGGAAAGGCCGGTAGTAGAGTTTTCTCGAGACCCTGATTCTGGGCAGAAGAATCTGACATTTTACCAGAGAGATAGTCCTACTAGAGTTGAGTATGATGATGATTATTATTTCTACCCAAACTCAAGGGGAATGATCTTTGACGATCGTGAGCTTCCATCTGATCACTTACACAAAGTGATGCATCCACGAGCACCACTTGACTATGACCATTCTCGGATGGGTTATGATCATAGAACTGTGTCAAGATCTAGTACCATGCTCCCTGTTGTGGAAAGAATTGATAATACTGAGGATTATTCTGGAAATTCAAGGAAGCGCATTATGCTGAATAATTCTACTTTAGAAAGGCATACACTATCAGACTACCCTGATATAAGCAGAATATCAAGTGCATCAAAGCAGAGTGGAGAATATATGGGTTCTGGACGCATGCATGACAAGTTTGGAAGGAGAATTTCACAAGATTATGAAACATCACATTTGGGTTCAGCGCAAGTTTGTCAAATCTCACATCTGAAAGAAGATTATGGTTATGAAAGAGATGGAAACCTGAAGTTTCAGGACAGACAGTGTCCTGTGTCTAAATACGACCCAGAAATGCATAGAAATACTATTAGAATGCAGAGTATGAGAGACAAGCTTGGGGTATATGAACCATCAGATAGGGTGGTAAAAAGAAAATATGTTAATGAAGAGCATGGAAGTATCCAGAATCCTAGAGAAATTATGTCAGGTAAATGGAATACCTCTAGAGAGTTTCAAGATTTGTATGATAGTGGTGAAGAGTGGGATGGTGAAGATGTAGGATCTATGTATACATCTAGATCAGCAAGATTGGGCCATAATGGACACTATAAGGCCCAGAGGAAATATGCTGGAATAGACCAGTATGATGAATTTGCATCTGATGATCGGCTGCCATCTCAAGACTCTTTGGCAGATGCACAAAGGCACTCAGTTAGATATTATAAACATGGTGATCGGTATGCCAAGGGTCACCAAAACTATGGTTCATTAAGTAGGCATAGGTCACAGCAAGTTGACATAAAAAGTGGCTTTCACAAACAGCACAAAGTTTGGAAGAGAAATGATAATTATCTAGAGGATGTCCACAGAGGTGATGATAATGATGCTGATACATCAGAAAATGGGTTGAGTTCTGCAGCTCCTGAGCCATCAGAGGATTCTGAGGAGTTTATGCAATTGGTACAAGAAGCCTTCCTAACATACTCTAAACAATTAAATATGAACCCTGGTGTTCGGAGAAGATACATGGAACAAGGAAAGGCTGGGACTTTATTCTGCATCGTATGTGGCCGAAGCTTCTCGAAGGAGTTCATGGACACCCAACGATTGGTAACACATGCATTTATGTCTAAAAAAGCTGGATTGAGGACACAACACTTGGGACTTCTCAAAGCAGTTTGTGCTCTGTTGGGGTGGAGTACTGTTATCCCCACTGACATAGTACTATGGGTTCCCCAGGTCTTGCCCAAGGCAGAAGCTTTGGCTCAGAAGGAAGATTTGATTCTTTGGCCTCCAGTCATTATTATCCACAATATTTCTATGTCAGACAACAATCCTGAAAATTGGAAAGTTGTAAGCATTGAAGCACTTGAGGCTTTTCTAAGAGGTAAAGGTTTAATTAGGGGAAGAATCAAGATGTGCCTGGGGAAGCCTGCTGATCAAAGTGTTGTGTTGGTGAAGTTCTTGGGAACTTTCACTGGGCTTGGGAATGCAGAGAGGATTCATAAGTATTTTGCAGAGCAGAACCGTGGCAGAGCAGACTTTGAGCGAGCAACGTCCAATAACGGAAAAATTGTGGAAGCAGGAATGCAGGGAGACAGTGTGGAGGAGCGATTTTTACATGGATATATGGGGATTGCGGAGGACTTAGATAAAGTAGATTTTAATACCAGGAACTGGAGTTTGATAAAGAGCAAGAAGGAGATTCAGGACCTGGCCAATGCTCCTGTTAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
XS

Protein Analysis

1011

Amino Acids

115.37

Weight (kDa)

8.57

Isoelectric Point (pI)

60.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XS PF03468 857 - 983 1.9e-18 XS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2019
Acc36I ACCTGC 2 cut(s) 121, 264
Acc65I GGTACC 1 cut(s) 403
AccB1I GGYRCC 2 cut(s) 83, 403
AccB7I CCANNNNNTGG 3 cut(s) 695, 2404, 2973
AccI GTMKAC 2 cut(s) 760, 1865
AccII CGCG 1 cut(s) 748
AciI CCGC 8 cut(s) 164, 240, 249, 268, 271, 361, 794, 2936
AclWI GGATC 4 cut(s) 627, 640, 904, 1864
AcoI YGGCCR 3 cut(s) 727, 2365, 3012
AcsI RAATTY 5 cut(s) 947, 995, 1354, 1503, 1946
AcuI CTGAAG 2 cut(s) 770, 1622
AdeI CACNNNGTG 1 cut(s) 1225
AfaI GTAC 6 cut(s) 135, 405, 1303, 2259, 2497, 2520
AfiI CCNNNNNNNGG 6 cut(s) 695, 933, 1088, 1318, 2404, 2973
AgeI ACCGGT 1 cut(s) 400
AgsI TTSAA 7 cut(s) 28, 490, 550, 1002, 1359, 1811, 2660
AhdI GACNNNNNGTC 1 cut(s) 591
AjiI CACGTC 1 cut(s) 446
AjnI CCWGG 5 cut(s) 2302, 2532, 2718, 2966, 3009
AjuI GAANNNNNNNTTGG 2 cut(s) 768, 800
AleI CACNNNNGTG 2 cut(s) 444, 2166
AluBI AGCT 8 cut(s) 569, 924, 1201, 1690, 2216, 2373, 2435, 2555
AluI AGCT 8 cut(s) 569, 924, 1201, 1690, 2216, 2373, 2435, 2555
Alw21I GWGCWC 2 cut(s) 1243, 2482
Alw26I GTCTC 4 cut(s) 115, 1071, 1677, 2886
AlwI GGATC 4 cut(s) 627, 640, 904, 1864
AlwNI CAGNNNCTG 3 cut(s) 2219, 2973, 3010
Ama87I CYCGRG 1 cut(s) 1074
AoxI GGCC 7 cut(s) 727, 1055, 1888, 1908, 2365, 2585, 3012
ApeKI GCWGC 6 cut(s) 37, 237, 750, 973, 1966, 2213
ApoI RAATTY 5 cut(s) 947, 995, 1354, 1503, 1946
AseI ATTAAT 1 cut(s) 1038
AsiGI ACCGGT 1 cut(s) 400
Asp700I GAANNNNTTC 3 cut(s) 783, 947, 2384
Asp718I GGTACC 1 cut(s) 403
AspA2I CCTAGG 1 cut(s) 8
AspLEI GCGC 3 cut(s) 750, 1368, 1543
AspS9I GGNCC 4 cut(s) 796, 1888, 1909, 3007
AsuC2I CCSGG 1 cut(s) 286
AsuII TTCGAA 1 cut(s) 75
AsuNHI GCTAGC 1 cut(s) 920
AvaI CYCGRG 1 cut(s) 1074
AvaII GGWCC 2 cut(s) 796, 3007
AvrII CCTAGG 1 cut(s) 8
BalI TGGCCA 2 cut(s) 729, 3014
BamHI GGATCC 1 cut(s) 632
BanI GGYRCC 2 cut(s) 83, 403
BanII GRGCYC 1 cut(s) 164
BauI CACGAG 2 cut(s) 17, 1236
Bbv12I GWGCWC 2 cut(s) 1243, 2482
BbvI GCAGC 6 cut(s) 49, 249, 762, 985, 1953, 2225
BcgI CGANNNNNNTGC 4 cut(s) 65, 99, 119, 153
BciT130I CCWGG 5 cut(s) 2304, 2534, 2720, 2968, 3011
BciVI GTATCC 1 cut(s) 1766
BclI TGATCA 3 cut(s) 1210, 1276, 2734
BcnI CCSGG 1 cut(s) 286
BcoDI GTCTC 4 cut(s) 115, 1071, 1677, 2886
BfaI CTAG 8 cut(s) 9, 921, 1131, 1299, 1767, 1800, 1872, 2150
BfmI CTRYAG 1 cut(s) 2211
BfuAI ACCTGC 2 cut(s) 121, 264
BfuI GTATCC 1 cut(s) 1766
BglII AGATCT 1 cut(s) 1295
BisI GCNGC 7 cut(s) 38, 238, 271, 751, 974, 1967, 2214
BlnI CCTAGG 1 cut(s) 8
BlsI GCNGC 7 cut(s) 39, 239, 272, 752, 975, 1968, 2215
BmcAI AGTACT 2 cut(s) 2497, 2520
Bme1390I CCNGG 6 cut(s) 286, 2304, 2534, 2720, 2968, 3011
Bme18I GGWCC 2 cut(s) 796, 3007
BmeRI GACNNNNNGTC 1 cut(s) 591
BmeT110I CYCGRG 1 cut(s) 1074
BmgBI CACGTC 1 cut(s) 446
BmgT120I GGNCC 4 cut(s) 796, 1888, 1909, 3007
BmiI GGNNCC 6 cut(s) 85, 405, 511, 634, 798, 2529
BmrFI CCNGG 6 cut(s) 286, 2304, 2534, 2720, 2968, 3011
BmrI ACTGGG 1 cut(s) 2784
BmsI GCATC 9 cut(s) 273, 425, 1218, 1240, 1451, 1961, 1981, 2170, 2364
BmtI GCTAGC 1 cut(s) 924
BmuI ACTGGG 1 cut(s) 2784
BpmI CTGGAG 2 cut(s) 2574, 2995
Bpu10I CCTNAGC 2 cut(s) 126, 2220
Bpu14I TTCGAA 1 cut(s) 75
BpuEI CTTGAG 4 cut(s) 696, 1156, 1959, 2687
BpuMI CCSGG 1 cut(s) 286
BsaBI GATNNNNATC 3 cut(s) 76, 960, 2145
BsaI GGTCTC 2 cut(s) 115, 1071
BsaJI CCNNGG 8 cut(s) 8, 694, 2040, 2302, 2532, 2544, 2719, 2824
BsaWI WCCGGW 2 cut(s) 80, 400
BsaXI ACNNNNNCTCC 2 cut(s) 2883, 2913
Bsc4I CCNNNNNNNGG 6 cut(s) 695, 933, 1088, 1318, 2404, 2973
Bse118I RCCGGY 2 cut(s) 400, 1057
Bse1I ACTGG 5 cut(s) 821, 1936, 2591, 2779, 2978
Bse8I GATNNNNATC 3 cut(s) 76, 960, 2145
BseBI CCWGG 5 cut(s) 2304, 2534, 2720, 2968, 3011
BseDI CCNNGG 8 cut(s) 8, 694, 2040, 2302, 2532, 2544, 2719, 2824
BseGI GGATG 8 cut(s) 264, 281, 349, 355, 1231, 1272, 1846, 2161
BseJI GATNNNNATC 3 cut(s) 76, 960, 2145
BseLI CCNNNNNNNGG 6 cut(s) 695, 933, 1088, 1318, 2404, 2973
BseMII CTCAG 6 cut(s) 117, 1329, 2019, 2211, 2229, 2576
BseNI ACTGG 5 cut(s) 821, 1936, 2591, 2779, 2978
BseRI GAGGAG 8 cut(s) 133, 166, 350, 353, 379, 916, 2255, 2918
BseXI GCAGC 6 cut(s) 49, 249, 762, 985, 1953, 2225
BseYI CCCAGC 1 cut(s) 2339
Bsh1236I CGCG 1 cut(s) 748
Bsh1285I CGRYCG 1 cut(s) 1195
BshFI GGCC 7 cut(s) 729, 1057, 1890, 1910, 2367, 2587, 3014
BshNI GGYRCC 2 cut(s) 83, 403
BshTI ACCGGT 1 cut(s) 400
BsiEI CGRYCG 1 cut(s) 1195
BsiHKAI GWGCWC 2 cut(s) 1243, 2482
BsiHKCI CYCGRG 1 cut(s) 1074
BsiSI CCGG 6 cut(s) 44, 81, 285, 401, 413, 1058
BslFI GGGAC 4 cut(s) 45, 598, 2356, 2472
BslI CCNNNNNNNGG 6 cut(s) 695, 933, 1088, 1318, 2404, 2973
BsmAI GTCTC 4 cut(s) 115, 1071, 1677, 2886
BsmFI GGGAC 4 cut(s) 45, 598, 2356, 2472
BsmI GAATGC 3 cut(s) 1674, 2791, 2889
BsnI GGCC 7 cut(s) 729, 1057, 1890, 1910, 2367, 2587, 3014
Bso31I GGTCTC 2 cut(s) 115, 1071
BsoBI CYCGRG 1 cut(s) 1074
Bsp119I TTCGAA 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 164, 1243, 2482
BspACI CCGC 8 cut(s) 164, 240, 249, 268, 271, 361, 794, 2936
BspANI GGCC 7 cut(s) 729, 1057, 1890, 1910, 2367, 2587, 3014
BspCNI CTCAG 6 cut(s) 118, 1330, 2018, 2212, 2230, 2575
BspFNI CGCG 1 cut(s) 748
BspLI GGNNCC 6 cut(s) 85, 405, 511, 634, 798, 2529
BspMAI CTGCAG 1 cut(s) 2215
BspMI ACCTGC 2 cut(s) 121, 264
BspOI GCTAGC 1 cut(s) 924
BspPI GGATC 4 cut(s) 627, 640, 904, 1864
BspQI GCTCTTC 1 cut(s) 1737
BspT104I TTCGAA 1 cut(s) 75
BspT107I GGYRCC 2 cut(s) 83, 403
BspTNI GGTCTC 2 cut(s) 115, 1071
BsrFI RCCGGY 2 cut(s) 400, 1057
BsrI ACTGG 5 cut(s) 821, 1936, 2591, 2779, 2978
BssAI RCCGGY 2 cut(s) 400, 1057
BssECI CCNNGG 8 cut(s) 8, 694, 2040, 2302, 2532, 2544, 2719, 2824
BssNAI GTATAC 2 cut(s) 761, 1866
BssSI CACGAG 2 cut(s) 17, 1236
BssT1I CCWWGG 4 cut(s) 8, 694, 2040, 2544
Bst1107I GTATAC 2 cut(s) 761, 1866
Bst2BI CACGAG 2 cut(s) 17, 1236
Bst2UI CCWGG 5 cut(s) 2304, 2534, 2720, 2968, 3011
Bst4CI ACNGT 7 cut(s) 664, 703, 1288, 1620, 2500, 2825, 2897
Bst6I CTCTTC 3 cut(s) 1737, 1827, 2126
BstAPI GCANNNNNTGC 2 cut(s) 979, 2477
BstBI TTCGAA 1 cut(s) 75
BstC8I GCNNGC 6 cut(s) 164, 227, 922, 1481, 2730, 2847
BstDEI CTNAG 8 cut(s) 126, 1338, 2005, 2220, 2238, 2562, 2678, 2944
BstDSI CCRYGG 1 cut(s) 2824
BstEII GGTNACC 2 cut(s) 288, 2045
BstF5I GGATG 8 cut(s) 264, 281, 349, 355, 1231, 1272, 1846, 2161
BstFNI CGCG 1 cut(s) 748
BstHHI GCGC 3 cut(s) 750, 1368, 1543
BstMAI GTCTC 4 cut(s) 115, 1071, 1677, 2886
BstMCI CGRYCG 1 cut(s) 1195
BstMWI GCNNNNNNNGC 7 cut(s) 246, 270, 973, 979, 1372, 2477, 2669
BstNI CCWGG 5 cut(s) 2304, 2534, 2720, 2968, 3011
BstNSI RCATGY 2 cut(s) 1483, 2417
BstPI GGTNACC 2 cut(s) 288, 2045
BstSCI CCNGG 6 cut(s) 284, 2302, 2532, 2718, 2966, 3009
BstSFI CTRYAG 1 cut(s) 2211
BstUI CGCG 1 cut(s) 748
BstV1I GCAGC 6 cut(s) 49, 249, 762, 985, 1953, 2225
BstX2I RGATCY 4 cut(s) 632, 896, 1295, 1856
BstXI CCANNNNNNTGG 1 cut(s) 2057
BstYI RGATCY 4 cut(s) 632, 896, 1295, 1856
BstZ17I GTATAC 2 cut(s) 761, 1866
BsuI GTATCC 1 cut(s) 1766
BsuRI GGCC 7 cut(s) 729, 1057, 1890, 1910, 2367, 2587, 3014
BtgI CCRYGG 1 cut(s) 2824
BtrI CACGTC 1 cut(s) 446
BtsCI GGATG 8 cut(s) 264, 281, 349, 355, 1231, 1272, 1846, 2161
BtsIMutI CAGTG 5 cut(s) 828, 1625, 2508, 2772, 2902
BveI ACCTGC 2 cut(s) 121, 264
Cac8I GCNNGC 6 cut(s) 164, 227, 922, 1481, 2730, 2847
CaiI CAGNNNCTG 3 cut(s) 2219, 2973, 3010
CfoI GCGC 3 cut(s) 750, 1368, 1543
Cfr10I RCCGGY 2 cut(s) 400, 1057
Cfr13I GGNCC 4 cut(s) 796, 1888, 1909, 3007
CseI GACGC 1 cut(s) 1485
Csp6I GTAC 6 cut(s) 134, 404, 1302, 2258, 2496, 2519
CspAI ACCGGT 1 cut(s) 400
CviQI GTAC 6 cut(s) 134, 404, 1302, 2258, 2496, 2519
DdeI CTNAG 8 cut(s) 126, 1338, 2005, 2220, 2238, 2562, 2678, 2944
DraIII CACNNNGTG 1 cut(s) 1225
DriI GACNNNNNGTC 1 cut(s) 591
EaeI YGGCCR 3 cut(s) 727, 2365, 3012
Eam1104I CTCTTC 3 cut(s) 1737, 1827, 2126
Eam1105I GACNNNNNGTC 1 cut(s) 591
EarI CTCTTC 3 cut(s) 1737, 1827, 2126
EciI GGCGGA 1 cut(s) 257
Eco130I CCWWGG 4 cut(s) 8, 694, 2040, 2544
Eco24I GRGCYC 1 cut(s) 164
Eco31I GGTCTC 2 cut(s) 115, 1071
Eco47I GGWCC 2 cut(s) 796, 3007
Eco57I CTGAAG 2 cut(s) 770, 1622
Eco88I CYCGRG 1 cut(s) 1074
Eco91I GGTNACC 2 cut(s) 288, 2045
EcoO109I RGGNCCY 1 cut(s) 3007
EcoO65I GGTNACC 2 cut(s) 288, 2045
EcoRI GAATTC 1 cut(s) 947
EcoRII CCWGG 5 cut(s) 2302, 2532, 2718, 2966, 3009
EcoT14I CCWWGG 4 cut(s) 8, 694, 2040, 2544
EcoT22I ATGCAT 5 cut(s) 1045, 1233, 1485, 1653, 2419
EcoT38I GRGCYC 1 cut(s) 164
ErhI CCWWGG 4 cut(s) 8, 694, 2040, 2544
FalI AAGNNNNNCTT 2 cut(s) 768, 800
FaqI GGGAC 4 cut(s) 45, 598, 2356, 2472
FauI CCCGC 1 cut(s) 171
FauNDI CATATG 2 cut(s) 609, 978
FbaI TGATCA 3 cut(s) 1210, 1276, 2734
FblI GTMKAC 2 cut(s) 760, 1865
Fnu4HI GCNGC 7 cut(s) 38, 238, 271, 751, 974, 1967, 2214
FokI GGATG 8 cut(s) 251, 268, 356, 362, 1218, 1279, 1853, 2168
FriOI GRGCYC 1 cut(s) 164
Fsp4HI GCNGC 7 cut(s) 38, 238, 271, 751, 974, 1967, 2214
FspBI CTAG 8 cut(s) 9, 921, 1131, 1299, 1767, 1800, 1872, 2150
GlaI GCGC 3 cut(s) 749, 1367, 1542
GluI GCNGC 7 cut(s) 38, 238, 271, 751, 974, 1967, 2214
GsaI CCCAGC 1 cut(s) 2343
GsuI CTGGAG 2 cut(s) 2574, 2995
HaeIII GGCC 7 cut(s) 729, 1057, 1890, 1910, 2367, 2587, 3014
HapII CCGG 6 cut(s) 44, 81, 285, 401, 413, 1058
HgaI GACGC 1 cut(s) 1485
HhaI GCGC 3 cut(s) 750, 1368, 1543
Hin6I GCGC 3 cut(s) 748, 1366, 1541
HinP1I GCGC 3 cut(s) 748, 1366, 1541
HincII GTYRAC 2 cut(s) 279, 2092
HindII GTYRAC 2 cut(s) 279, 2092
HindIII AAGCTT 3 cut(s) 1688, 2371, 2553
HpaII CCGG 6 cut(s) 44, 81, 285, 401, 413, 1058
Hpy166II GTNNAC 6 cut(s) 279, 578, 761, 1866, 2092, 2161
Hpy8I GTNNAC 6 cut(s) 279, 578, 761, 1866, 2092, 2161
HpyAV CCTTC 7 cut(s) 836, 993, 1491, 2278, 2374, 2560, 2989
HpyCH4III ACNGT 7 cut(s) 664, 703, 1288, 1620, 2500, 2825, 2897
HpyCH4IV ACGT 4 cut(s) 58, 445, 763, 2852
HpyF10VI GCNNNNNNNGC 7 cut(s) 246, 270, 973, 979, 1372, 2477, 2669
HpyF3I CTNAG 8 cut(s) 126, 1338, 2005, 2220, 2238, 2562, 2678, 2944
HpySE526I ACGT 4 cut(s) 58, 445, 763, 2852
HspAI GCGC 3 cut(s) 748, 1366, 1541
KpnI GGTACC 1 cut(s) 407
Ksp22I TGATCA 3 cut(s) 1210, 1276, 2734
LguI GCTCTTC 1 cut(s) 1737
LmnI GCTCC 8 cut(s) 515, 671, 716, 929, 1314, 2221, 2905, 3025
Lsp1109I GCAGC 6 cut(s) 49, 249, 762, 985, 1953, 2225
LweI GCATC 9 cut(s) 273, 425, 1218, 1240, 1451, 1961, 1981, 2170, 2364
MaeI CTAG 8 cut(s) 9, 921, 1131, 1299, 1767, 1800, 1872, 2150
MaeII ACGT 4 cut(s) 58, 445, 763, 2852
MaeIII GTNAC 7 cut(s) 288, 324, 656, 823, 2045, 2079, 2407
MfeI CAATTG 1 cut(s) 2252
MflI RGATCY 4 cut(s) 632, 896, 1295, 1856
MhlI GDGCHC 3 cut(s) 164, 1243, 2482
MlsI TGGCCA 2 cut(s) 729, 3014
MluNI TGGCCA 2 cut(s) 729, 3014
MlyI GAGTC 2 cut(s) 703, 1973
Mox20I TGGCCA 2 cut(s) 729, 3014
Mph1103I ATGCAT 5 cut(s) 1045, 1233, 1485, 1653, 2419
MroXI GAANNNNTTC 3 cut(s) 783, 947, 2384
MscI TGGCCA 2 cut(s) 729, 3014
MseI TTAA 9 cut(s) 434, 1020, 1038, 1737, 2066, 2291, 2693, 2961, 3027
MslI CAYNNNNRTG 3 cut(s) 180, 444, 2166
Msp20I TGGCCA 2 cut(s) 729, 3014
MspA1I CMGCKG 2 cut(s) 240, 569
MspI CCGG 6 cut(s) 44, 81, 285, 401, 413, 1058
MspR9I CCNGG 6 cut(s) 286, 2304, 2534, 2720, 2968, 3011
MunI CAATTG 1 cut(s) 2252
Mva1269I GAATGC 3 cut(s) 1674, 2791, 2889
MvaI CCWGG 5 cut(s) 2304, 2534, 2720, 2968, 3011
MvnI CGCG 1 cut(s) 748
MwoI GCNNNNNNNGC 7 cut(s) 246, 270, 973, 979, 1372, 2477, 2669
NciI CCSGG 1 cut(s) 286
NdeI CATATG 2 cut(s) 609, 978
NheI GCTAGC 1 cut(s) 920
NlaIV GGNNCC 6 cut(s) 85, 405, 511, 634, 798, 2529
NmuCI GTSAC 6 cut(s) 288, 324, 656, 823, 2045, 2079
NsiI ATGCAT 5 cut(s) 1045, 1233, 1485, 1653, 2419
NspI RCATGY 2 cut(s) 1483, 2417
NspV TTCGAA 1 cut(s) 75
OliI CACNNNNGTG 2 cut(s) 444, 2166
PaeI GCATGC 1 cut(s) 1483
PaeR7I CTCGAG 1 cut(s) 1074
PciSI GCTCTTC 1 cut(s) 1737
PctI GAATGC 3 cut(s) 1674, 2791, 2889
PdmI GAANNNNTTC 3 cut(s) 783, 947, 2384
PflFI GACNNNGTC 1 cut(s) 1620
PflMI CCANNNNNTGG 3 cut(s) 695, 2404, 2973
PinAI ACCGGT 1 cut(s) 400
PkrI GCNGC 7 cut(s) 39, 239, 272, 752, 975, 1968, 2215
Ple19I CGATCG 1 cut(s) 1195
PleI GAGTC 2 cut(s) 703, 1973
PpsI GAGTC 2 cut(s) 703, 1973
PpuMI RGGWCCY 1 cut(s) 3007
PshBI ATTAAT 1 cut(s) 1038
PsiI TTATAA 1 cut(s) 2019
Psp5II RGGWCCY 1 cut(s) 3007
Psp6I CCWGG 5 cut(s) 2302, 2532, 2718, 2966, 3009
PspEI GGTNACC 2 cut(s) 288, 2045
PspFI CCCAGC 1 cut(s) 2339
PspGI CCWGG 5 cut(s) 2302, 2532, 2718, 2966, 3009
PspN4I GGNNCC 6 cut(s) 85, 405, 511, 634, 798, 2529
PspPI GGNCC 4 cut(s) 796, 1888, 1909, 3007
PspPPI RGGWCCY 1 cut(s) 3007
PsrI GAACNNNNNNTAC 2 cut(s) 2511, 2543
PstI CTGCAG 1 cut(s) 2215
PstNI CAGNNNCTG 3 cut(s) 2219, 2973, 3010
PsuI RGATCY 4 cut(s) 632, 896, 1295, 1856
PsyI GACNNNGTC 1 cut(s) 1620
PvuI CGATCG 1 cut(s) 1195
PvuII CAGCTG 1 cut(s) 569
RsaI GTAC 6 cut(s) 135, 405, 1303, 2259, 2497, 2520
RsaNI GTAC 6 cut(s) 134, 404, 1302, 2258, 2496, 2519
RseI CAYNNNNRTG 3 cut(s) 180, 444, 2166
SapI GCTCTTC 1 cut(s) 1737
SaqAI TTAA 9 cut(s) 434, 1020, 1038, 1737, 2066, 2291, 2693, 2961, 3027
SatI GCNGC 7 cut(s) 38, 238, 271, 751, 974, 1967, 2214
Sau96I GGNCC 4 cut(s) 796, 1888, 1909, 3007
ScaI AGTACT 2 cut(s) 2497, 2520
SchI GAGTC 2 cut(s) 703, 1973
ScrFI CCNGG 6 cut(s) 286, 2304, 2534, 2720, 2968, 3011
SduI GDGCHC 3 cut(s) 164, 1243, 2482
SfaNI GCATC 9 cut(s) 273, 425, 1218, 1240, 1451, 1961, 1981, 2170, 2364
SfcI CTRYAG 1 cut(s) 2211
Sfr274I CTCGAG 1 cut(s) 1074
SfuI TTCGAA 1 cut(s) 75
SinI GGWCC 2 cut(s) 796, 3007
SlaI CTCGAG 1 cut(s) 1074
SmiMI CAYNNNNRTG 3 cut(s) 180, 444, 2166
SmlI CTYRAG 5 cut(s) 711, 1074, 1171, 1974, 2666
SmoI CTYRAG 5 cut(s) 711, 1074, 1171, 1974, 2666
SphI GCATGC 1 cut(s) 1483
SsiI CCGC 8 cut(s) 164, 240, 249, 268, 271, 361, 794, 2936
SspI AATATT 2 cut(s) 145, 2611
SspMI CTAG 8 cut(s) 9, 921, 1131, 1299, 1767, 1800, 1872, 2150
StyD4I CCNGG 6 cut(s) 284, 2302, 2532, 2718, 2966, 3009
StyI CCWWGG 4 cut(s) 8, 694, 2040, 2544
TaaI ACNGT 7 cut(s) 664, 703, 1288, 1620, 2500, 2825, 2897
TaiI ACGT 4 cut(s) 61, 448, 766, 2855
TaqI TCGA 3 cut(s) 75, 1075, 2378
TatI WGTACW 2 cut(s) 2495, 2518
TauI GCSGC 1 cut(s) 273
Tru1I TTAA 9 cut(s) 434, 1020, 1038, 1737, 2066, 2291, 2693, 2961, 3027
Tru9I TTAA 9 cut(s) 434, 1020, 1038, 1737, 2066, 2291, 2693, 2961, 3027
TscAI CASTG 5 cut(s) 828, 1625, 2515, 2779, 2902
TseFI GTSAC 6 cut(s) 288, 324, 656, 823, 2045, 2079
TseI GCWGC 6 cut(s) 37, 237, 750, 973, 1966, 2213
Tsp45I GTSAC 6 cut(s) 288, 324, 656, 823, 2045, 2079
TspGWI ACGGA 1 cut(s) 2877
TspRI CASTG 5 cut(s) 828, 1625, 2515, 2779, 2902
Tth111I GACNNNGTC 1 cut(s) 1620
Van91I CCANNNNNTGG 3 cut(s) 695, 2404, 2973
VpaK11BI GGWCC 2 cut(s) 796, 3007
VspI ATTAAT 1 cut(s) 1038
XapI RAATTY 5 cut(s) 947, 995, 1354, 1503, 1946
XbaI TCTAGA 3 cut(s) 1799, 1871, 2149
XceI RCATGY 2 cut(s) 1483, 2417
XhoI CTCGAG 1 cut(s) 1074
XmaJI CCTAGG 1 cut(s) 8
XmiI GTMKAC 2 cut(s) 760, 1865
XmnI GAANNNNTTC 3 cut(s) 783, 947, 2384
XspI CTAG 8 cut(s) 9, 921, 1131, 1299, 1767, 1800, 1872, 2150
ZrmI AGTACT 2 cut(s) 2497, 2520
Zsp2I ATGCAT 5 cut(s) 1045, 1233, 1485, 1653, 2419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.