Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0009713

Physical Location & Seq

Genomic Coordinates Forward (+)

41609763 .. 41615694

Gene Structure 5932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029630

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGCAACCTCGGAGGCATGAGAGTTTCAATAGACAGCAGCCTCCGGCTTCTAAATTACGTCCCACCTACCGATTCGAATCCGGTGCCAACAACCCTTATAGTAGTAGTGGTAGTAGGAGGAGACCTGAGGAGGTACATCGGACTATTAGGAGGAGTTTCAGCCCGCAACAAGATCATCTGGGTGTCAGTCAAAGGAATGTTGCTTCTATTCAGAGGGAGTATGGCTGGCATTTGGGTGGGGGTGGCGGCGGTAGGACTGATGGCGTCCGCCGAAGGTCAACATCCGGGTCACCGCTACTGCCTTTTGGTGAAATGAGAAATATGTCACAATTTGAGGAGGAGGAGGAGGAGGATGCGGATTTGCGTAGGAGTTATTCCCCACCACCACCACCACCGCAACCATTGGTACCTGCTCCAGCAACTGTTCCTTTGGAGTTAAAGCACAGACATGATAGCGTTGAGGGTGGAAATTATAGTGTCAATGATGATTTGAATACTAGGAGAGTTTGTGGCTCCAAGCATAATGATTTTGGAATCAGTAAAGAAGATTTGAATGAAAGCAGATTGGCAGCTGGTGGTAAACATGGGACATTGGGTCAAAAACCAATCCATATGGAAGATAGTGCTGTAAGAGGATCCAAAACCATGTTTATCAAAGGTGACACTGTGCATGGAGCATATCATTCTTCGCCAAGCCTTGGTACTGTTATAACTCAAGGAGCAAGGGGTGGGCACCTACCATCATCAACGCGCAGCATGAGTATACGTCATTCTGACCAAGAAAGGCTTCAGTATGCGGACCCTATATCATTGGATAGATTACCAATGACAGAAGCCTACAAAGAAGGAAATAAACCCGTTTTTCGTACAAGAGATGGCTTTTATTCCATGATGTCTGGATCTCATTCCAAGAATTATTTTGCTAGCTCCTCAACCCTGTTGAGGAATGAATTCCAAGATTCCTATCAGCATGAGCAGCATATGCCTTCTTTGGAAGAATTTTCAAGAAGTAGTAGAAAACTCAAAGATTCTGTGAGCATTAATGCATATAGGGAAAGGCCGGAAGTAGAGTTTTCTCGAGACCCTGATTCTGGGCAGAAGAATCTGACATTTTACCAGAGAGATAGTCCTACTAGAGTTGAGTATGATGATGATTATTATTTCTACCCAAACTCAAGGGGAATGATATTTGACGATCGTGAGCTTCCATCTGATCACTTACACAAAGTGATGCATCCACGAGTACCACTTGACTATGACCATTCTCGGATGGGTTATGATCATAGAACTGTGTCAAGATCTAGTACCATGCTCCCTGTTGTGGAAAGAATTGATAATACTGAGGATTATTCTGGAAATTCAAGGAAGCGCATTATGCTGAATAATTCTACTTTAGAAAGGCATACACTATCAGACTACCCTGATATAAGCAGAATATCAAGTGCATCGAAGCAGAGTGGAGAATATATGGGTTCTGGACGCATGCATGACAAGTTTGGGAGGAGAATTTCACAAGATTATGAAACATCGCATTTGGGTGCAGCGCAAGTTTGTCAAATCTCACATCTGAAAGAAGATTATGGTTATGAAAGAGATGGAAACCTGAAGTTTCAGGACAGGCAGTGTCCTGTGTCTAAATACGACCCAGAAATGCATAGAAATACTATTAGAATGCAGAGTATGAGAGACAAGCTTGGGGTATATGAACCATCAGATAGGGTGGTGAAAAGAAAATATGTTAATGAAGAGCATGGAAGTATCCAGAATCCTAGAGAAATTATGTCAGGTAAATGGAATACCTCTAGAGAGTTTCAAGATTTGTATGATAGTGGTGAAGAGTGGAATGGTGAAGATGTAGGATCTATGTATACATCTAGATCAGCAAGATTGGGCCATAATGAACACTATAAGGCCCAGAGGAAATATGCTGGAATGGACCAGTATGATGAATTTGCATCTGATGATCGGCTGCCGTCTCAAGACTCTTTGGCAGATGCACAAAGGCACTCAGTTAGATATTATAAACATGGTGATCGGTATGCCAAGGGTCACCAAAACTATGGTTCATTAAGTAGGCATAGGTCACAGCAAGTTGACATAAAAAGCGGCTTTCACAAACAGCACAAAGTTTGGAAGAGAAATGATAATTATCTAGAGGATGTCCACAGAGGTGATGATAATGATGCTGATACATCAGAAAATGGGTTGAGTTCTGCAGCTCCTGAGCCATCAGAGGATTCTGAGGAGTTTATGCAATTGGTACAAGAAGCCTTCCTAACATACTCTAAACAATTAAATATGAACCCTGGTGTTCGGAGAAGATACATGGAACAAGGAAAGGCTGGGACTTTATTCTGCATCGTATGTGGCCGAAGGTCTGTTTTCTTTTCTGTCATGTTCTTTCTAAGTGGGGTTCCTGTTTTATCTTTTCGTTCCGGAGTTTTTAAGTATTACTCTTACAGATGCAGTCAACTTAGTATGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

829

Amino Acids

95.14

Weight (kDa)

8.24

Isoelectric Point (pI)

67.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009713)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05850 FvH4_7g05850 FvH4_7g05850
malus_domestica	MD02G1254600.v1.1 MD07G1067200.v1.1
prunus_persica	Prupe.2G084400_v2.0.a1 Prupe.2G084400_v2.0.a1
pyrus_communis	pycom02g21450 pycom07g05140
rosa_chinensis	RchiOBHm_Chr1g0332961
rosa_laevigata	RLG00000029630
rosa_multiflora	Rmu_co8522447.1_g000002 Rmu_sc0000117.1_g000033 Rmu_sc0000813.1_g000010
rosa_roxburghii	Rroxscaffold_4G00317840
rosa_rugosa	Rorug01G0106200
rosa_samantha	Rh1AG129400 Rh1BG098600 Rh1CG123300 Rh1DG135200
rosa_wichuraiana	Rw0G014350 Rw1G010360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	710, 2022
Acc36I	ACCTGC	1 cut(s)	418
Acc65I	GGTACC	1 cut(s)	406
AccB1I	GGYRCC	3 cut(s)	83, 406, 732
AccB7I	CCANNNNNTGG	1 cut(s)	698
AccI	GTMKAC	2 cut(s)	763, 1868
AccII	CGCG	1 cut(s)	751
AccIII	TCCGGA	1 cut(s)	2435
AciI	CCGC	9 cut(s)	164, 246, 249, 268, 293, 356, 395, 797, 2106
AclWI	GGATC	4 cut(s)	630, 643, 907, 1867
AcoI	YGGCCR	1 cut(s)	2368
AcsI	RAATTY	5 cut(s)	950, 998, 1357, 1506, 1949
AcuI	CTGAAG	2 cut(s)	773, 1625
AcyI	GRCGYC	1 cut(s)	264
AdeI	CACNNNGTG	1 cut(s)	1228
AfaI	GTAC	7 cut(s)	135, 408, 703, 868, 1245, 1306, 2262
AfiI	CCNNNNNNNGG	4 cut(s)	698, 942, 1091, 1321
AgsI	TTSAA	6 cut(s)	28, 493, 553, 1005, 1362, 1814
AhdI	GACNNNNNGTC	1 cut(s)	594
AjnI	CCWGG	1 cut(s)	2305
AjuI	GAANNNNNNNTTGG	2 cut(s)	771, 803
AleI	CACNNNNGTG	1 cut(s)	2169
AluBI	AGCT	5 cut(s)	572, 927, 1204, 1693, 2219
AluI	AGCT	5 cut(s)	572, 927, 1204, 1693, 2219
Alw26I	GTCTC	4 cut(s)	115, 1074, 1680, 1980
AlwI	GGATC	4 cut(s)	630, 643, 907, 1867
AlwNI	CAGNNNCTG	2 cut(s)	422, 2222
Ama87I	CYCGRG	1 cut(s)	1077
Aor13HI	TCCGGA	1 cut(s)	2435
AoxI	GGCC	4 cut(s)	1058, 1891, 1911, 2368
ApeKI	GCWGC	7 cut(s)	37, 569, 753, 976, 1541, 1969, 2216
ApoI	RAATTY	5 cut(s)	950, 998, 1357, 1506, 1949
AseI	ATTAAT	1 cut(s)	1041
Asp700I	GAANNNNTTC	2 cut(s)	786, 950
Asp718I	GGTACC	1 cut(s)	406
AspLEI	GCGC	3 cut(s)	753, 1371, 1546
AspS9I	GGNCC	4 cut(s)	799, 1891, 1912, 1936
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	9 cut(s)	282, 320, 671, 1735, 1844, 1859, 2042, 2042, 2183
AsuII	TTCGAA	1 cut(s)	75
AsuNHI	GCTAGC	1 cut(s)	923
AvaI	CYCGRG	1 cut(s)	1077
AvaII	GGWCC	2 cut(s)	799, 1936
AxyI	CCTNAGG	1 cut(s)	126
BaeGI	GKGCMC	1 cut(s)	735
BamHI	GGATCC	1 cut(s)	635
BanI	GGYRCC	3 cut(s)	83, 406, 732
BauI	CACGAG	1 cut(s)	1239
BbvI	GCAGC	7 cut(s)	49, 581, 765, 988, 1553, 1956, 2228
BccI	CCATC	8 cut(s)	254, 748, 869, 1216, 1264, 1589, 1717, 2236
BceAI	ACGGC	1 cut(s)	1957
BcgI	CGANNNNNNTGC	2 cut(s)	65, 99
BciT130I	CCWGG	1 cut(s)	2307
BciVI	GTATCC	1 cut(s)	1769
BclI	TGATCA	2 cut(s)	1213, 1279
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	4 cut(s)	115, 1074, 1680, 1980
BfaI	CTAG	8 cut(s)	498, 924, 1134, 1302, 1770, 1803, 1875, 2153
BfmI	CTRYAG	1 cut(s)	2214
BfuAI	ACCTGC	1 cut(s)	418
BfuI	GTATCC	1 cut(s)	1769
BglII	AGATCT	1 cut(s)	1298
BisI	GCNGC	9 cut(s)	38, 247, 570, 754, 977, 1542, 1970, 2107, 2217
BlsI	GCNGC	9 cut(s)	39, 248, 571, 755, 978, 1543, 1971, 2108, 2218
Bme1390I	CCNGG	2 cut(s)	286, 2307
Bme18I	GGWCC	2 cut(s)	799, 1936
BmeRI	GACNNNNNGTC	1 cut(s)	594
BmeT110I	CYCGRG	1 cut(s)	1077
BmgT120I	GGNCC	4 cut(s)	799, 1891, 1912, 1936
BmiI	GGNNCC	7 cut(s)	85, 408, 514, 637, 734, 801, 2415
BmrFI	CCNGG	2 cut(s)	286, 2307
BmsI	GCATC	9 cut(s)	343, 1221, 1243, 1454, 1964, 1984, 2173, 2367, 2453
BmtI	GCTAGC	1 cut(s)	927
BpmI	CTGGAG	1 cut(s)	399
Bpu10I	CCTNAGC	1 cut(s)	2223
Bpu14I	TTCGAA	1 cut(s)	75
BpuEI	CTTGAG	3 cut(s)	699, 1159, 1962
BpuMI	CCSGG	1 cut(s)	286
BsaBI	GATNNNNATC	3 cut(s)	76, 963, 2148
BsaHI	GRCGYC	1 cut(s)	264
BsaI	GGTCTC	2 cut(s)	115, 1074
BsaJI	CCNNGG	4 cut(s)	8, 697, 2043, 2305
BsaWI	WCCGGW	2 cut(s)	80, 2435
BsaXI	ACNNNNNCTCC	2 cut(s)	493, 523
Bsc4I	CCNNNNNNNGG	4 cut(s)	698, 942, 1091, 1321
Bse1I	ACTGG	1 cut(s)	1939
Bse21I	CCTNAGG	1 cut(s)	126
Bse8I	GATNNNNATC	3 cut(s)	76, 963, 2148
BseAI	TCCGGA	1 cut(s)	2435
BseBI	CCWGG	1 cut(s)	2307
BseDI	CCNNGG	4 cut(s)	8, 697, 2043, 2305
BseGI	GGATG	5 cut(s)	281, 358, 1234, 1275, 2164
BseJI	GATNNNNATC	3 cut(s)	76, 963, 2148
BseLI	CCNNNNNNNGG	4 cut(s)	698, 942, 1091, 1321
BseMII	CTCAG	5 cut(s)	117, 1332, 2022, 2214, 2232
BseNI	ACTGG	1 cut(s)	1939
BseSI	GKGCMC	1 cut(s)	735
BseXI	GCAGC	7 cut(s)	49, 581, 765, 988, 1553, 1956, 2228
BseYI	CCCAGC	1 cut(s)	2342
BsgI	GTGCAG	1 cut(s)	1560
Bsh1236I	CGCG	1 cut(s)	751
Bsh1285I	CGRYCG	1 cut(s)	1198
BshFI	GGCC	4 cut(s)	1060, 1893, 1913, 2370
BshNI	GGYRCC	3 cut(s)	83, 406, 732
BsiEI	CGRYCG	1 cut(s)	1198
BsiHKCI	CYCGRG	1 cut(s)	1077
BsiSI	CCGG	5 cut(s)	44, 81, 285, 1061, 2436
BslFI	GGGAC	3 cut(s)	45, 601, 2359
BslI	CCNNNNNNNGG	4 cut(s)	698, 942, 1091, 1321
BsmAI	GTCTC	4 cut(s)	115, 1074, 1680, 1980
BsmBI	CGTCTC	1 cut(s)	1980
BsmFI	GGGAC	3 cut(s)	45, 601, 2359
BsmI	GAATGC	1 cut(s)	1677
BsnI	GGCC	4 cut(s)	1060, 1893, 1913, 2370
Bso31I	GGTCTC	2 cut(s)	115, 1074
BsoBI	CYCGRG	1 cut(s)	1077
Bsp119I	TTCGAA	1 cut(s)	75
Bsp1286I	GDGCHC	1 cut(s)	735
Bsp13I	TCCGGA	1 cut(s)	2435
BspACI	CCGC	9 cut(s)	164, 246, 249, 268, 293, 356, 395, 797, 2106
BspANI	GGCC	4 cut(s)	1060, 1893, 1913, 2370
BspCNI	CTCAG	5 cut(s)	118, 1333, 2021, 2215, 2233
BspEI	TCCGGA	1 cut(s)	2435
BspFNI	CGCG	1 cut(s)	751
BspLI	GGNNCC	7 cut(s)	85, 408, 514, 637, 734, 801, 2415
BspMAI	CTGCAG	1 cut(s)	2218
BspMI	ACCTGC	1 cut(s)	418
BspOI	GCTAGC	1 cut(s)	927
BspPI	GGATC	4 cut(s)	630, 643, 907, 1867
BspQI	GCTCTTC	1 cut(s)	1740
BspT104I	TTCGAA	1 cut(s)	75
BspT107I	GGYRCC	3 cut(s)	83, 406, 732
BspTNI	GGTCTC	2 cut(s)	115, 1074
BsrI	ACTGG	1 cut(s)	1939
BssECI	CCNNGG	4 cut(s)	8, 697, 2043, 2305
BssNAI	GTATAC	2 cut(s)	764, 1869
BssNI	GRCGYC	1 cut(s)	264
BssSI	CACGAG	1 cut(s)	1239
BssT1I	CCWWGG	2 cut(s)	697, 2043
Bst1107I	GTATAC	2 cut(s)	764, 1869
Bst2BI	CACGAG	1 cut(s)	1239
Bst2UI	CCWGG	1 cut(s)	2307
Bst4CI	ACNGT	4 cut(s)	424, 667, 706, 1291
Bst6I	CTCTTC	3 cut(s)	1740, 1830, 2129
BstACI	GRCGYC	1 cut(s)	264
BstAPI	GCANNNNNTGC	1 cut(s)	982
BstBI	TTCGAA	1 cut(s)	75
BstC8I	GCNNGC	4 cut(s)	164, 227, 925, 1484
BstDEI	CTNAG	7 cut(s)	126, 1341, 2008, 2223, 2241, 2405, 2474
BstEII	GGTNACC	2 cut(s)	288, 2048
BstF5I	GGATG	5 cut(s)	281, 358, 1234, 1275, 2164
BstFNI	CGCG	1 cut(s)	751
BstHHI	GCGC	3 cut(s)	753, 1371, 1546
BstMAI	GTCTC	4 cut(s)	115, 1074, 1680, 1980
BstMCI	CGRYCG	1 cut(s)	1198
BstMWI	GCNNNNNNNGC	3 cut(s)	976, 982, 1375
BstNI	CCWGG	1 cut(s)	2307
BstNSI	RCATGY	1 cut(s)	1486
BstPI	GGTNACC	2 cut(s)	288, 2048
BstSCI	CCNGG	2 cut(s)	284, 2305
BstSFI	CTRYAG	1 cut(s)	2214
BstSLI	GKGCMC	1 cut(s)	735
BstUI	CGCG	1 cut(s)	751
BstV1I	GCAGC	7 cut(s)	49, 581, 765, 988, 1553, 1956, 2228
BstX2I	RGATCY	4 cut(s)	635, 899, 1298, 1859
BstXI	CCANNNNNNTGG	1 cut(s)	2060
BstYI	RGATCY	4 cut(s)	635, 899, 1298, 1859
BstZ17I	GTATAC	2 cut(s)	764, 1869
Bsu36I	CCTNAGG	1 cut(s)	126
BsuI	GTATCC	1 cut(s)	1769
BsuRI	GGCC	4 cut(s)	1060, 1893, 1913, 2370
BtgZI	GCGATG	1 cut(s)	1512
BtsCI	GGATG	5 cut(s)	281, 358, 1234, 1275, 2164
BtsI	GCAGTG	1 cut(s)	1628
BtsIMutI	CAGTG	2 cut(s)	663, 1628
BveI	ACCTGC	1 cut(s)	418
Cac8I	GCNNGC	4 cut(s)	164, 227, 925, 1484
CaiI	CAGNNNCTG	2 cut(s)	422, 2222
CfoI	GCGC	3 cut(s)	753, 1371, 1546
Cfr13I	GGNCC	4 cut(s)	799, 1891, 1912, 1936
CseI	GACGC	2 cut(s)	253, 1488
Csp6I	GTAC	7 cut(s)	134, 407, 702, 867, 1244, 1305, 2261
CviQI	GTAC	7 cut(s)	134, 407, 702, 867, 1244, 1305, 2261
DdeI	CTNAG	7 cut(s)	126, 1341, 2008, 2223, 2241, 2405, 2474
DraIII	CACNNNGTG	1 cut(s)	1228
DriI	GACNNNNNGTC	1 cut(s)	594
EaeI	YGGCCR	1 cut(s)	2368
Eam1104I	CTCTTC	3 cut(s)	1740, 1830, 2129
Eam1105I	GACNNNNNGTC	1 cut(s)	594
EarI	CTCTTC	3 cut(s)	1740, 1830, 2129
EciI	GGCGGA	1 cut(s)	257
Eco130I	CCWWGG	2 cut(s)	697, 2043
Eco31I	GGTCTC	2 cut(s)	115, 1074
Eco47I	GGWCC	2 cut(s)	799, 1936
Eco57I	CTGAAG	2 cut(s)	773, 1625
Eco81I	CCTNAGG	1 cut(s)	126
Eco88I	CYCGRG	1 cut(s)	1077
Eco91I	GGTNACC	2 cut(s)	288, 2048
EcoO65I	GGTNACC	2 cut(s)	288, 2048
EcoRI	GAATTC	1 cut(s)	950
EcoRII	CCWGG	1 cut(s)	2305
EcoT14I	CCWWGG	2 cut(s)	697, 2043
EcoT22I	ATGCAT	4 cut(s)	1048, 1236, 1488, 1656
ErhI	CCWWGG	2 cut(s)	697, 2043
Esp3I	CGTCTC	1 cut(s)	1980
FalI	AAGNNNNNCTT	2 cut(s)	771, 803
FaqI	GGGAC	3 cut(s)	45, 601, 2359
FauI	CCCGC	1 cut(s)	171
FauNDI	CATATG	2 cut(s)	612, 981
FbaI	TGATCA	2 cut(s)	1213, 1279
FblI	GTMKAC	2 cut(s)	763, 1868
Fnu4HI	GCNGC	9 cut(s)	38, 247, 570, 754, 977, 1542, 1970, 2107, 2217
FokI	GGATG	5 cut(s)	268, 365, 1221, 1282, 2171
Fsp4HI	GCNGC	9 cut(s)	38, 247, 570, 754, 977, 1542, 1970, 2107, 2217
FspBI	CTAG	8 cut(s)	498, 924, 1134, 1302, 1770, 1803, 1875, 2153
GlaI	GCGC	3 cut(s)	752, 1370, 1545
GluI	GCNGC	9 cut(s)	38, 247, 570, 754, 977, 1542, 1970, 2107, 2217
GsaI	CCCAGC	1 cut(s)	2346
GsuI	CTGGAG	1 cut(s)	399
HaeIII	GGCC	4 cut(s)	1060, 1893, 1913, 2370
HapII	CCGG	5 cut(s)	44, 81, 285, 1061, 2436
HgaI	GACGC	2 cut(s)	253, 1488
HhaI	GCGC	3 cut(s)	753, 1371, 1546
Hin1I	GRCGYC	1 cut(s)	264
Hin6I	GCGC	3 cut(s)	751, 1369, 1544
HinP1I	GCGC	3 cut(s)	751, 1369, 1544
HincII	GTYRAC	3 cut(s)	279, 2095, 2471
HindII	GTYRAC	3 cut(s)	279, 2095, 2471
HindIII	AAGCTT	1 cut(s)	1691
HpaII	CCGG	5 cut(s)	44, 81, 285, 1061, 2436
HphI	GGTGA	9 cut(s)	282, 320, 671, 1735, 1844, 1859, 2042, 2042, 2183
Hpy166II	GTNNAC	7 cut(s)	279, 581, 764, 1869, 2095, 2164, 2471
Hpy8I	GTNNAC	7 cut(s)	279, 581, 764, 1869, 2095, 2164, 2471
HpyAV	CCTTC	5 cut(s)	267, 839, 996, 2281, 2367
HpyCH4III	ACNGT	4 cut(s)	424, 667, 706, 1291
HpyCH4IV	ACGT	2 cut(s)	58, 766
HpyF10VI	GCNNNNNNNGC	3 cut(s)	976, 982, 1375
HpyF3I	CTNAG	7 cut(s)	126, 1341, 2008, 2223, 2241, 2405, 2474
HpySE526I	ACGT	2 cut(s)	58, 766
Hsp92I	GRCGYC	1 cut(s)	264
HspAI	GCGC	3 cut(s)	751, 1369, 1544
Kpn2I	TCCGGA	1 cut(s)	2435
KpnI	GGTACC	1 cut(s)	410
Ksp22I	TGATCA	2 cut(s)	1213, 1279
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	7 cut(s)	418, 518, 674, 719, 932, 1317, 2224
Lsp1109I	GCAGC	7 cut(s)	49, 581, 765, 988, 1553, 1956, 2228
LweI	GCATC	9 cut(s)	343, 1221, 1243, 1454, 1964, 1984, 2173, 2367, 2453
MaeI	CTAG	8 cut(s)	498, 924, 1134, 1302, 1770, 1803, 1875, 2153
MaeII	ACGT	2 cut(s)	58, 766
MaeIII	GTNAC	5 cut(s)	288, 324, 659, 2048, 2082
MfeI	CAATTG	1 cut(s)	2255
MflI	RGATCY	4 cut(s)	635, 899, 1298, 1859
MhlI	GDGCHC	1 cut(s)	735
MlyI	GAGTC	1 cut(s)	1976
Mph1103I	ATGCAT	4 cut(s)	1048, 1236, 1488, 1656
MroI	TCCGGA	1 cut(s)	2435
MroXI	GAANNNNTTC	2 cut(s)	786, 950
MseI	TTAA	6 cut(s)	437, 1041, 1740, 2069, 2294, 2445
MslI	CAYNNNNRTG	5 cut(s)	180, 234, 447, 1536, 2169
MspA1I	CMGCKG	1 cut(s)	572
MspI	CCGG	5 cut(s)	44, 81, 285, 1061, 2436
MspR9I	CCNGG	2 cut(s)	286, 2307
MunI	CAATTG	1 cut(s)	2255
Mva1269I	GAATGC	1 cut(s)	1677
MvaI	CCWGG	1 cut(s)	2307
MvnI	CGCG	1 cut(s)	751
MwoI	GCNNNNNNNGC	3 cut(s)	976, 982, 1375
NciI	CCSGG	1 cut(s)	286
NdeI	CATATG	2 cut(s)	612, 981
NheI	GCTAGC	1 cut(s)	923
NlaIV	GGNNCC	7 cut(s)	85, 408, 514, 637, 734, 801, 2415
NmuCI	GTSAC	5 cut(s)	288, 324, 659, 2048, 2082
NsiI	ATGCAT	4 cut(s)	1048, 1236, 1488, 1656
NspI	RCATGY	1 cut(s)	1486
NspV	TTCGAA	1 cut(s)	75
OliI	CACNNNNGTG	1 cut(s)	2169
PaeI	GCATGC	1 cut(s)	1486
PaeR7I	CTCGAG	1 cut(s)	1077
PciSI	GCTCTTC	1 cut(s)	1740
PctI	GAATGC	1 cut(s)	1677
PdmI	GAANNNNTTC	2 cut(s)	786, 950
PfeI	GAWTC	9 cut(s)	72, 77, 534, 959, 1028, 1088, 1102, 1765, 2237
PflMI	CCANNNNNTGG	1 cut(s)	698
PkrI	GCNGC	9 cut(s)	39, 248, 571, 755, 978, 1543, 1971, 2108, 2218
Ple19I	CGATCG	1 cut(s)	1198
PleI	GAGTC	1 cut(s)	1976
PpsI	GAGTC	1 cut(s)	1976
PshBI	ATTAAT	1 cut(s)	1041
PsiI	TTATAA	2 cut(s)	710, 2022
Psp6I	CCWGG	1 cut(s)	2305
PspEI	GGTNACC	2 cut(s)	288, 2048
PspFI	CCCAGC	1 cut(s)	2342
PspGI	CCWGG	1 cut(s)	2305
PspN4I	GGNNCC	7 cut(s)	85, 408, 514, 637, 734, 801, 2415
PspPI	GGNCC	4 cut(s)	799, 1891, 1912, 1936
PstI	CTGCAG	1 cut(s)	2218
PstNI	CAGNNNCTG	2 cut(s)	422, 2222
PsuI	RGATCY	4 cut(s)	635, 899, 1298, 1859
PvuI	CGATCG	1 cut(s)	1198
PvuII	CAGCTG	1 cut(s)	572
RsaI	GTAC	7 cut(s)	135, 408, 703, 868, 1245, 1306, 2262
RsaNI	GTAC	7 cut(s)	134, 407, 702, 867, 1244, 1305, 2261
RseI	CAYNNNNRTG	5 cut(s)	180, 234, 447, 1536, 2169
SapI	GCTCTTC	1 cut(s)	1740
SaqAI	TTAA	6 cut(s)	437, 1041, 1740, 2069, 2294, 2445
SatI	GCNGC	9 cut(s)	38, 247, 570, 754, 977, 1542, 1970, 2107, 2217
Sau96I	GGNCC	4 cut(s)	799, 1891, 1912, 1936
SchI	GAGTC	1 cut(s)	1976
ScrFI	CCNGG	2 cut(s)	286, 2307
SduI	GDGCHC	1 cut(s)	735
SfaNI	GCATC	9 cut(s)	343, 1221, 1243, 1454, 1964, 1984, 2173, 2367, 2453
SfcI	CTRYAG	1 cut(s)	2214
Sfr274I	CTCGAG	1 cut(s)	1077
SfuI	TTCGAA	1 cut(s)	75
SinI	GGWCC	2 cut(s)	799, 1936
SlaI	CTCGAG	1 cut(s)	1077
SmiMI	CAYNNNNRTG	5 cut(s)	180, 234, 447, 1536, 2169
SmlI	CTYRAG	4 cut(s)	714, 1077, 1174, 1977
SmoI	CTYRAG	4 cut(s)	714, 1077, 1174, 1977
SphI	GCATGC	1 cut(s)	1486
SsiI	CCGC	9 cut(s)	164, 246, 249, 268, 293, 356, 395, 797, 2106
SspMI	CTAG	8 cut(s)	498, 924, 1134, 1302, 1770, 1803, 1875, 2153
StyD4I	CCNGG	2 cut(s)	284, 2305
StyI	CCWWGG	2 cut(s)	697, 2043
TaaI	ACNGT	4 cut(s)	424, 667, 706, 1291
TaiI	ACGT	2 cut(s)	61, 769
TaqI	TCGA	3 cut(s)	75, 1078, 1448
TauI	GCSGC	2 cut(s)	249, 2109
TfiI	GAWTC	9 cut(s)	72, 77, 534, 959, 1028, 1088, 1102, 1765, 2237
Tru1I	TTAA	6 cut(s)	437, 1041, 1740, 2069, 2294, 2445
Tru9I	TTAA	6 cut(s)	437, 1041, 1740, 2069, 2294, 2445
TscAI	CASTG	2 cut(s)	670, 1628
TseFI	GTSAC	5 cut(s)	288, 324, 659, 2048, 2082
TseI	GCWGC	7 cut(s)	37, 569, 753, 976, 1541, 1969, 2216
Tsp45I	GTSAC	5 cut(s)	288, 324, 659, 2048, 2082
TspRI	CASTG	2 cut(s)	670, 1628
Van91I	CCANNNNNTGG	1 cut(s)	698
VpaK11BI	GGWCC	2 cut(s)	799, 1936
VspI	ATTAAT	1 cut(s)	1041
XapI	RAATTY	5 cut(s)	950, 998, 1357, 1506, 1949
XbaI	TCTAGA	3 cut(s)	1802, 1874, 2152
XceI	RCATGY	1 cut(s)	1486
XhoI	CTCGAG	1 cut(s)	1077
XmiI	GTMKAC	2 cut(s)	763, 1868
XmnI	GAANNNNTTC	2 cut(s)	786, 950
XspI	CTAG	8 cut(s)	498, 924, 1134, 1302, 1770, 1803, 1875, 2153
Zsp2I	ATGCAT	4 cut(s)	1048, 1236, 1488, 1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.