Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8522447.1

Orthogroup ID

OG0009713

Physical Location & Seq

Genomic Coordinates Reverse (-)

4104 .. 8892

Gene Structure 4789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8522447.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

gaggaggaggaggatggggatttgcggaggagttattcaccaccaccacaaccaccggtacctgttccggcatctgttcctttggagttaaaacacagacgtgatagcgttgaggctggaaattatagtgtcaatgatgatttgaatagtaggagagtttatggctccgagcataatgattttggaatcagtaaagaagatttgaatgaaagcagattgacagctggtggtaaacatgggacattgggtcaaaaaccaatccatatggaagatagtgctgtaagaggatccaaaaccatgtttatcaaaggtgacaccgtgcatggagcatatcattcttctccaagccttggtactgttataactcaaggagcaaggggtggccacctaccatcatcaacgcgcagcatgagcatacgccattctgaccaagaaaggcttcagtatgcagaccctatatctttggatagattaccagtgacagaagcctacaaagaaggaaataaacccgtttttcctacaagagatggcttttattccatgatgtctggatctcattccaagaattattttgctagctcctcaacagggttgaggaatgaattccaagattcctatcagcatgagcagcatatgccttctttggaagaattttcaagaagtagtagaaaacttaaagattctgtgagcattaatgcatatagggaaaggccggttgtagagttttctcgagaccctgattctgggcagaagaatctgacattttaccagagagatagtcctactagagttgagtatgatgatgattattatttctacccaaactcaagaggaatgatatttgacgatcgtgagcttccatctgatcacttacacaaagtgatgcatccacgagcaccacttgactatgaccattctcggatgggttatgatcatagaactgtgtcaagatctagtaccatgctccctgttgtggaaagaattgataatactgaggattattctggaaattcaaggaagcgcattatgctgaataattctactttagaaaggcatacactttcagactaccctgatataagcagaatatcaagtgcatcaaagcagagtggagaatatatgggttctggacgcatgcatgacaagtttggaaggagaatttcacaagattatgaaacatcgcatttgggtgcagcgcaagtttgtcaaatctcacatctgaaagaagattatggttatgaaagagatggaaacctgaagtttcaggacagacagtgtcctgtgtctaaatacgacccagaaatgcatagaaatacgattagaatgcagagtatgagagacaagcttggggtatatgaaccatcagatagggtggtgaaaagaaaatatgttaatgaagagcatggaagtatccagaatcctagagaaattatgtcaggtaaatggaatacctctagagagtttcaagatttgtatgatagtggtgaagagtggaatggtgaagatgtaggatctatgtatacatctagatcagcaagattgggccataatgaacactataaggcccagaggaaatatgctggaatagaccagtatgatgaatttgtatctgatgatcgcctgccgtctcaagactcgttggcagatgcacaaaggcactcagttagatattataaacatggtgatcggtatgccaagggtcaccaaaactatggttcattaagtaggcataggtcacagcaagttgacataaaaagtggctttcacaaacagcacaaggtttggaagagaaatgataattatctagaggatgtccacagaggtgatgataatgatgctgatacatcagaaaatgggttgagttctgcagctcctgagccatcagaggattctgaggagtttatgcaattggtacaagaagccttcctaacatactctaaacaattaaatatgaaccctggtgttcggagaagatacatggaacaaggaaaggctgggactttattctgcatcgtatgtggccgaagctactcgaaggagttcatggacacccaacgattggtaacacatgcatttatgtctaaaaaagctggattgaggacacaacacttgggacttctcaaagcagtttgtgctctgttggggtggagtactgttatccccactgacatagtactatgggttccccaggtcttgcccaaggcagaagctttggctcagaaggaagatttgattctttggcctccagtgattattatccacaatatttctatgtcagacaacaatcctgaaaattggaaggttgtaagcattgaagctctggaggcttttctaagaggtaaaggtttaattaggggaagaatcaagatgtgcctggggaagcctgctgatcaaagtgttgtgttggtgaagttcttgggaactttcactgggcttgggaatgcagagaggattcataagtattttgcagagcagaaccgtggcagagcagactttgagcgagcaacgtccaacaacggaaaaattgtggaagcaggaatgcagggagacagtgtggaggagcgatttttacatggatatatggggattgcggaggacttagataaagtagattttaataccaggaactggagtttgataaagagcaagaaggagattcaggacctggccaatgctcctgttaaaccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

896

Amino Acids

102.26

Weight (kDa)

6.63

Isoelectric Point (pI)

55.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009713)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05850 FvH4_7g05850 FvH4_7g05850
malus_domestica	MD02G1254600.v1.1 MD07G1067200.v1.1
prunus_persica	Prupe.2G084400_v2.0.a1 Prupe.2G084400_v2.0.a1
pyrus_communis	pycom02g21450 pycom07g05140
rosa_chinensis	RchiOBHm_Chr1g0332961
rosa_laevigata	RLG00000029630
rosa_multiflora	Rmu_co8522447.1_g000002 Rmu_sc0000117.1_g000033 Rmu_sc0000813.1_g000010
rosa_roxburghii	Rroxscaffold_4G00317840
rosa_rugosa	Rorug01G0106200
rosa_samantha	Rh1AG129400 Rh1BG098600 Rh1CG123300 Rh1DG135200
rosa_wichuraiana	Rw0G014350 Rw1G010360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	362, 1674
Acc65I	GGTACC	1 cut(s)	58
AccB1I	GGYRCC	1 cut(s)	58
AccB7I	CCANNNNNTGG	3 cut(s)	350, 2059, 2628
AccI	GTMKAC	1 cut(s)	1520
AccII	CGCG	1 cut(s)	403
AciI	CCGC	2 cut(s)	25, 2591
AclWI	GGATC	4 cut(s)	282, 295, 559, 1519
AcoI	YGGCCR	3 cut(s)	382, 2020, 2667
AcsI	RAATTY	5 cut(s)	602, 650, 1009, 1158, 1601
AcuI	CTGAAG	2 cut(s)	425, 1277
AdeI	CACNNNGTG	1 cut(s)	880
AfaI	GTAC	6 cut(s)	60, 355, 958, 1914, 2152, 2175
AfiI	CCNNNNNNNGG	6 cut(s)	350, 588, 743, 973, 2059, 2628
AgeI	ACCGGT	1 cut(s)	55
AgsI	TTSAA	6 cut(s)	145, 205, 657, 1014, 1466, 2315
AhdI	GACNNNNNGTC	1 cut(s)	246
AjiI	CACGTC	1 cut(s)	101
AjnI	CCWGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
AjuI	GAANNNNNNNTTGG	2 cut(s)	423, 455
AleI	CACNNNNGTG	2 cut(s)	99, 1821
AluBI	AGCT	9 cut(s)	224, 579, 856, 1345, 1871, 2028, 2090, 2210, 2318
AluI	AGCT	9 cut(s)	224, 579, 856, 1345, 1871, 2028, 2090, 2210, 2318
Alw21I	GWGCWC	2 cut(s)	898, 2137
Alw26I	GTCTC	4 cut(s)	726, 1332, 1632, 2541
AlwI	GGATC	4 cut(s)	282, 295, 559, 1519
AlwNI	CAGNNNCTG	3 cut(s)	1874, 2628, 2665
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	7 cut(s)	382, 710, 1543, 1563, 2020, 2240, 2667
ApeKI	GCWGC	4 cut(s)	405, 628, 1193, 1868
ApoI	RAATTY	5 cut(s)	602, 650, 1009, 1158, 1601
AseI	ATTAAT	1 cut(s)	693
AsiGI	ACCGGT	1 cut(s)	55
Asp700I	GAANNNNTTC	3 cut(s)	438, 602, 2039
Asp718I	GGTACC	1 cut(s)	58
AspLEI	GCGC	3 cut(s)	405, 1023, 1198
AspS9I	GGNCC	3 cut(s)	1543, 1564, 2662
AsuHPI	GGTGA	9 cut(s)	30, 323, 1387, 1496, 1511, 1694, 1694, 1835, 2419
AsuNHI	GCTAGC	1 cut(s)	575
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	1 cut(s)	2662
BalI	TGGCCA	2 cut(s)	384, 2669
BamHI	GGATCC	1 cut(s)	287
BanI	GGYRCC	1 cut(s)	58
BauI	CACGAG	1 cut(s)	891
Bbv12I	GWGCWC	2 cut(s)	898, 2137
BbvI	GCAGC	4 cut(s)	417, 640, 1205, 1880
BccI	CCATC	8 cut(s)	8, 400, 521, 868, 916, 1241, 1369, 1888
BceAI	ACGGC	1 cut(s)	1609
BcgI	CGANNNNNNTGC	2 cut(s)	1306, 1340
BciT130I	CCWGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
BciVI	GTATCC	1 cut(s)	1421
BclI	TGATCA	3 cut(s)	865, 931, 2389
BcoDI	GTCTC	4 cut(s)	726, 1332, 1632, 2541
BfaI	CTAG	7 cut(s)	576, 786, 954, 1422, 1455, 1527, 1805
BfmI	CTRYAG	1 cut(s)	1866
BfuI	GTATCC	1 cut(s)	1421
BglII	AGATCT	1 cut(s)	950
BisI	GCNGC	4 cut(s)	406, 629, 1194, 1869
BlsI	GCNGC	4 cut(s)	407, 630, 1195, 1870
BmcAI	AGTACT	2 cut(s)	2152, 2175
Bme1390I	CCNGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
Bme18I	GGWCC	1 cut(s)	2662
BmeRI	GACNNNNNGTC	1 cut(s)	246
BmeT110I	CYCGRG	1 cut(s)	729
BmgBI	CACGTC	1 cut(s)	101
BmgT120I	GGNCC	3 cut(s)	1543, 1564, 2662
BmiI	GGNNCC	4 cut(s)	60, 166, 289, 2184
BmrFI	CCNGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
BmrI	ACTGGG	1 cut(s)	2439
BmsI	GCATC	7 cut(s)	80, 873, 895, 1106, 1636, 1825, 2019
BmtI	GCTAGC	1 cut(s)	579
BmuI	ACTGGG	1 cut(s)	2439
BpmI	CTGGAG	3 cut(s)	2229, 2342, 2650
Bpu10I	CCTNAGC	1 cut(s)	1875
BpuEI	CTTGAG	3 cut(s)	351, 811, 1614
BsaBI	GATNNNNATC	3 cut(s)	615, 1800, 2255
BsaI	GGTCTC	1 cut(s)	726
BsaJI	CCNNGG	7 cut(s)	349, 1695, 1957, 2187, 2199, 2374, 2479
BsaWI	WCCGGW	1 cut(s)	55
BsaXI	ACNNNNNCTCC	2 cut(s)	2538, 2568
Bsc4I	CCNNNNNNNGG	6 cut(s)	350, 588, 743, 973, 2059, 2628
Bse118I	RCCGGY	2 cut(s)	55, 712
Bse1I	ACTGG	5 cut(s)	476, 1591, 2246, 2434, 2633
Bse8I	GATNNNNATC	3 cut(s)	615, 1800, 2255
BseBI	CCWGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
BseDI	CCNNGG	7 cut(s)	349, 1695, 1957, 2187, 2199, 2374, 2479
BseGI	GGATG	4 cut(s)	19, 886, 927, 1816
BseJI	GATNNNNATC	3 cut(s)	615, 1800, 2255
BseLI	CCNNNNNNNGG	6 cut(s)	350, 588, 743, 973, 2059, 2628
BseMII	CTCAG	5 cut(s)	984, 1674, 1866, 1884, 2231
BseNI	ACTGG	5 cut(s)	476, 1591, 2246, 2434, 2633
BseRI	GAGGAG	7 cut(s)	17, 20, 23, 43, 571, 1910, 2573
BseXI	GCAGC	4 cut(s)	417, 640, 1205, 1880
BseYI	CCCAGC	1 cut(s)	1994
BsgI	GTGCAG	1 cut(s)	1212
Bsh1236I	CGCG	1 cut(s)	403
Bsh1285I	CGRYCG	1 cut(s)	850
BshFI	GGCC	7 cut(s)	384, 712, 1545, 1565, 2022, 2242, 2669
BshNI	GGYRCC	1 cut(s)	58
BshTI	ACCGGT	1 cut(s)	55
BsiEI	CGRYCG	1 cut(s)	850
BsiHKAI	GWGCWC	2 cut(s)	898, 2137
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	3 cut(s)	56, 68, 713
BslFI	GGGAC	3 cut(s)	253, 2011, 2127
BslI	CCNNNNNNNGG	6 cut(s)	350, 588, 743, 973, 2059, 2628
BsmAI	GTCTC	4 cut(s)	726, 1332, 1632, 2541
BsmBI	CGTCTC	1 cut(s)	1632
BsmFI	GGGAC	3 cut(s)	253, 2011, 2127
BsmI	GAATGC	3 cut(s)	1329, 2446, 2544
BsnI	GGCC	7 cut(s)	384, 712, 1545, 1565, 2022, 2242, 2669
Bso31I	GGTCTC	1 cut(s)	726
BsoBI	CYCGRG	1 cut(s)	729
Bsp1286I	GDGCHC	2 cut(s)	898, 2137
BspACI	CCGC	2 cut(s)	25, 2591
BspANI	GGCC	7 cut(s)	384, 712, 1545, 1565, 2022, 2242, 2669
BspCNI	CTCAG	5 cut(s)	985, 1673, 1867, 1885, 2230
BspFNI	CGCG	1 cut(s)	403
BspLI	GGNNCC	4 cut(s)	60, 166, 289, 2184
BspMAI	CTGCAG	1 cut(s)	1870
BspOI	GCTAGC	1 cut(s)	579
BspPI	GGATC	4 cut(s)	282, 295, 559, 1519
BspQI	GCTCTTC	1 cut(s)	1392
BspT107I	GGYRCC	1 cut(s)	58
BspTNI	GGTCTC	1 cut(s)	726
BsrFI	RCCGGY	2 cut(s)	55, 712
BsrI	ACTGG	5 cut(s)	476, 1591, 2246, 2434, 2633
BssAI	RCCGGY	2 cut(s)	55, 712
BssECI	CCNNGG	7 cut(s)	349, 1695, 1957, 2187, 2199, 2374, 2479
BssNAI	GTATAC	1 cut(s)	1521
BssSI	CACGAG	1 cut(s)	891
BssT1I	CCWWGG	3 cut(s)	349, 1695, 2199
Bst1107I	GTATAC	1 cut(s)	1521
Bst2BI	CACGAG	1 cut(s)	891
Bst2UI	CCWGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
Bst4CI	ACNGT	7 cut(s)	319, 358, 943, 1275, 2155, 2480, 2552
Bst6I	CTCTTC	3 cut(s)	1392, 1482, 1781
BstAPI	GCANNNNNTGC	2 cut(s)	634, 2132
BstC8I	GCNNGC	5 cut(s)	577, 1136, 1622, 2385, 2502
BstDEI	CTNAG	7 cut(s)	993, 1660, 1875, 1893, 2217, 2333, 2599
BstDSI	CCRYGG	1 cut(s)	2479
BstEII	GGTNACC	1 cut(s)	1700
BstF5I	GGATG	4 cut(s)	19, 886, 927, 1816
BstFNI	CGCG	1 cut(s)	403
BstHHI	GCGC	3 cut(s)	405, 1023, 1198
BstMAI	GTCTC	4 cut(s)	726, 1332, 1632, 2541
BstMCI	CGRYCG	1 cut(s)	850
BstMWI	GCNNNNNNNGC	6 cut(s)	411, 628, 634, 1027, 2132, 2324
BstNI	CCWGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
BstNSI	RCATGY	2 cut(s)	1138, 2072
BstPI	GGTNACC	1 cut(s)	1700
BstSCI	CCNGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
BstSFI	CTRYAG	1 cut(s)	1866
BstUI	CGCG	1 cut(s)	403
BstV1I	GCAGC	4 cut(s)	417, 640, 1205, 1880
BstX2I	RGATCY	4 cut(s)	287, 551, 950, 1511
BstXI	CCANNNNNNTGG	1 cut(s)	1712
BstYI	RGATCY	4 cut(s)	287, 551, 950, 1511
BstZ17I	GTATAC	1 cut(s)	1521
BsuI	GTATCC	1 cut(s)	1421
BsuRI	GGCC	7 cut(s)	384, 712, 1545, 1565, 2022, 2242, 2669
BtgI	CCRYGG	1 cut(s)	2479
BtgZI	GCGATG	1 cut(s)	1164
BtrI	CACGTC	1 cut(s)	101
BtsCI	GGATG	4 cut(s)	19, 886, 927, 1816
BtsIMutI	CAGTG	6 cut(s)	483, 1280, 2163, 2253, 2427, 2557
Cac8I	GCNNGC	5 cut(s)	577, 1136, 1622, 2385, 2502
CaiI	CAGNNNCTG	3 cut(s)	1874, 2628, 2665
CfoI	GCGC	3 cut(s)	405, 1023, 1198
Cfr10I	RCCGGY	2 cut(s)	55, 712
Cfr13I	GGNCC	3 cut(s)	1543, 1564, 2662
CseI	GACGC	1 cut(s)	1140
Csp6I	GTAC	6 cut(s)	59, 354, 957, 1913, 2151, 2174
CspAI	ACCGGT	1 cut(s)	55
CviQI	GTAC	6 cut(s)	59, 354, 957, 1913, 2151, 2174
DdeI	CTNAG	7 cut(s)	993, 1660, 1875, 1893, 2217, 2333, 2599
DraIII	CACNNNGTG	1 cut(s)	880
DriI	GACNNNNNGTC	1 cut(s)	246
EaeI	YGGCCR	3 cut(s)	382, 2020, 2667
Eam1104I	CTCTTC	3 cut(s)	1392, 1482, 1781
Eam1105I	GACNNNNNGTC	1 cut(s)	246
EarI	CTCTTC	3 cut(s)	1392, 1482, 1781
Eco130I	CCWWGG	3 cut(s)	349, 1695, 2199
Eco31I	GGTCTC	1 cut(s)	726
Eco47I	GGWCC	1 cut(s)	2662
Eco57I	CTGAAG	2 cut(s)	425, 1277
Eco88I	CYCGRG	1 cut(s)	729
Eco91I	GGTNACC	1 cut(s)	1700
EcoO109I	RGGNCCY	1 cut(s)	2662
EcoO65I	GGTNACC	1 cut(s)	1700
EcoRI	GAATTC	1 cut(s)	602
EcoRII	CCWGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
EcoT14I	CCWWGG	3 cut(s)	349, 1695, 2199
EcoT22I	ATGCAT	5 cut(s)	700, 888, 1140, 1308, 2074
ErhI	CCWWGG	3 cut(s)	349, 1695, 2199
Esp3I	CGTCTC	1 cut(s)	1632
FalI	AAGNNNNNCTT	2 cut(s)	423, 455
FaqI	GGGAC	3 cut(s)	253, 2011, 2127
FauNDI	CATATG	2 cut(s)	264, 633
FbaI	TGATCA	3 cut(s)	865, 931, 2389
FblI	GTMKAC	1 cut(s)	1520
Fnu4HI	GCNGC	4 cut(s)	406, 629, 1194, 1869
FokI	GGATG	4 cut(s)	26, 873, 934, 1823
Fsp4HI	GCNGC	4 cut(s)	406, 629, 1194, 1869
FspBI	CTAG	7 cut(s)	576, 786, 954, 1422, 1455, 1527, 1805
GlaI	GCGC	3 cut(s)	404, 1022, 1197
GluI	GCNGC	4 cut(s)	406, 629, 1194, 1869
GsaI	CCCAGC	1 cut(s)	1998
GsuI	CTGGAG	3 cut(s)	2229, 2342, 2650
HaeIII	GGCC	7 cut(s)	384, 712, 1545, 1565, 2022, 2242, 2669
HapII	CCGG	3 cut(s)	56, 68, 713
HgaI	GACGC	1 cut(s)	1140
HhaI	GCGC	3 cut(s)	405, 1023, 1198
Hin6I	GCGC	3 cut(s)	403, 1021, 1196
HinP1I	GCGC	3 cut(s)	403, 1021, 1196
HincII	GTYRAC	1 cut(s)	1747
HindII	GTYRAC	1 cut(s)	1747
HindIII	AAGCTT	2 cut(s)	1343, 2208
HpaII	CCGG	3 cut(s)	56, 68, 713
HphI	GGTGA	9 cut(s)	30, 323, 1387, 1496, 1511, 1694, 1694, 1835, 2419
Hpy166II	GTNNAC	4 cut(s)	233, 1521, 1747, 1816
Hpy8I	GTNNAC	4 cut(s)	233, 1521, 1747, 1816
HpyAV	CCTTC	8 cut(s)	491, 648, 1146, 1933, 2029, 2215, 2293, 2644
HpyCH4III	ACNGT	7 cut(s)	319, 358, 943, 1275, 2155, 2480, 2552
HpyCH4IV	ACGT	2 cut(s)	100, 2507
HpyF10VI	GCNNNNNNNGC	6 cut(s)	411, 628, 634, 1027, 2132, 2324
HpyF3I	CTNAG	7 cut(s)	993, 1660, 1875, 1893, 2217, 2333, 2599
HpySE526I	ACGT	2 cut(s)	100, 2507
HspAI	GCGC	3 cut(s)	403, 1021, 1196
KpnI	GGTACC	1 cut(s)	62
Ksp22I	TGATCA	3 cut(s)	865, 931, 2389
LguI	GCTCTTC	1 cut(s)	1392
LmnI	GCTCC	8 cut(s)	170, 326, 371, 584, 969, 1876, 2560, 2680
Lsp1109I	GCAGC	4 cut(s)	417, 640, 1205, 1880
LweI	GCATC	7 cut(s)	80, 873, 895, 1106, 1636, 1825, 2019
MaeI	CTAG	7 cut(s)	576, 786, 954, 1422, 1455, 1527, 1805
MaeII	ACGT	2 cut(s)	100, 2507
MaeIII	GTNAC	5 cut(s)	311, 478, 1700, 1734, 2062
MfeI	CAATTG	1 cut(s)	1907
MflI	RGATCY	4 cut(s)	287, 551, 950, 1511
MhlI	GDGCHC	2 cut(s)	898, 2137
MlsI	TGGCCA	2 cut(s)	384, 2669
MluNI	TGGCCA	2 cut(s)	384, 2669
MlyI	GAGTC	1 cut(s)	1628
MmeI	TCCRAC	1 cut(s)	2535
Mox20I	TGGCCA	2 cut(s)	384, 2669
Mph1103I	ATGCAT	5 cut(s)	700, 888, 1140, 1308, 2074
MroXI	GAANNNNTTC	3 cut(s)	438, 602, 2039
MscI	TGGCCA	2 cut(s)	384, 2669
MseI	TTAA	9 cut(s)	89, 675, 693, 1392, 1721, 1946, 2348, 2616, 2682
MslI	CAYNNNNRTG	3 cut(s)	99, 1188, 1821
Msp20I	TGGCCA	2 cut(s)	384, 2669
MspA1I	CMGCKG	1 cut(s)	224
MspI	CCGG	3 cut(s)	56, 68, 713
MspR9I	CCNGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
MunI	CAATTG	1 cut(s)	1907
Mva1269I	GAATGC	3 cut(s)	1329, 2446, 2544
MvaI	CCWGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
MvnI	CGCG	1 cut(s)	403
MwoI	GCNNNNNNNGC	6 cut(s)	411, 628, 634, 1027, 2132, 2324
NdeI	CATATG	2 cut(s)	264, 633
NheI	GCTAGC	1 cut(s)	575
NlaIV	GGNNCC	4 cut(s)	60, 166, 289, 2184
NmuCI	GTSAC	4 cut(s)	311, 478, 1700, 1734
NsiI	ATGCAT	5 cut(s)	700, 888, 1140, 1308, 2074
NspI	RCATGY	2 cut(s)	1138, 2072
OliI	CACNNNNGTG	2 cut(s)	99, 1821
PaeI	GCATGC	1 cut(s)	1138
PaeR7I	CTCGAG	1 cut(s)	729
PciSI	GCTCTTC	1 cut(s)	1392
PctI	GAATGC	3 cut(s)	1329, 2446, 2544
PdmI	GAANNNNTTC	3 cut(s)	438, 602, 2039
PflFI	GACNNNGTC	1 cut(s)	1275
PflMI	CCANNNNNTGG	3 cut(s)	350, 2059, 2628
PinAI	ACCGGT	1 cut(s)	55
PkrI	GCNGC	4 cut(s)	407, 630, 1195, 1870
Ple19I	CGATCG	1 cut(s)	850
PleI	GAGTC	1 cut(s)	1628
PpsI	GAGTC	1 cut(s)	1628
PpuMI	RGGWCCY	1 cut(s)	2662
PshBI	ATTAAT	1 cut(s)	693
PsiI	TTATAA	2 cut(s)	362, 1674
Psp5II	RGGWCCY	1 cut(s)	2662
Psp6I	CCWGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
PspEI	GGTNACC	1 cut(s)	1700
PspFI	CCCAGC	1 cut(s)	1994
PspGI	CCWGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
PspN4I	GGNNCC	4 cut(s)	60, 166, 289, 2184
PspPI	GGNCC	3 cut(s)	1543, 1564, 2662
PspPPI	RGGWCCY	1 cut(s)	2662
PsrI	GAACNNNNNNTAC	2 cut(s)	2166, 2198
PstI	CTGCAG	1 cut(s)	1870
PstNI	CAGNNNCTG	3 cut(s)	1874, 2628, 2665
PsuI	RGATCY	4 cut(s)	287, 551, 950, 1511
PsyI	GACNNNGTC	1 cut(s)	1275
PvuI	CGATCG	1 cut(s)	850
PvuII	CAGCTG	1 cut(s)	224
RsaI	GTAC	6 cut(s)	60, 355, 958, 1914, 2152, 2175
RsaNI	GTAC	6 cut(s)	59, 354, 957, 1913, 2151, 2174
RseI	CAYNNNNRTG	3 cut(s)	99, 1188, 1821
SapI	GCTCTTC	1 cut(s)	1392
SaqAI	TTAA	9 cut(s)	89, 675, 693, 1392, 1721, 1946, 2348, 2616, 2682
SatI	GCNGC	4 cut(s)	406, 629, 1194, 1869
Sau96I	GGNCC	3 cut(s)	1543, 1564, 2662
ScaI	AGTACT	2 cut(s)	2152, 2175
SchI	GAGTC	1 cut(s)	1628
ScrFI	CCNGG	5 cut(s)	1959, 2189, 2375, 2623, 2666
SduI	GDGCHC	2 cut(s)	898, 2137
SfaNI	GCATC	7 cut(s)	80, 873, 895, 1106, 1636, 1825, 2019
SfcI	CTRYAG	1 cut(s)	1866
Sfr274I	CTCGAG	1 cut(s)	729
SinI	GGWCC	1 cut(s)	2662
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	3 cut(s)	99, 1188, 1821
SmlI	CTYRAG	4 cut(s)	366, 729, 826, 1629
SmoI	CTYRAG	4 cut(s)	366, 729, 826, 1629
SphI	GCATGC	1 cut(s)	1138
SsiI	CCGC	2 cut(s)	25, 2591
SspI	AATATT	1 cut(s)	2266
SspMI	CTAG	7 cut(s)	576, 786, 954, 1422, 1455, 1527, 1805
StyD4I	CCNGG	5 cut(s)	1957, 2187, 2373, 2621, 2664
StyI	CCWWGG	3 cut(s)	349, 1695, 2199
TaaI	ACNGT	7 cut(s)	319, 358, 943, 1275, 2155, 2480, 2552
TaiI	ACGT	2 cut(s)	103, 2510
TaqI	TCGA	2 cut(s)	730, 2033
TatI	WGTACW	2 cut(s)	2150, 2173
Tru1I	TTAA	9 cut(s)	89, 675, 693, 1392, 1721, 1946, 2348, 2616, 2682
Tru9I	TTAA	9 cut(s)	89, 675, 693, 1392, 1721, 1946, 2348, 2616, 2682
TscAI	CASTG	6 cut(s)	483, 1280, 2170, 2253, 2434, 2557
TseFI	GTSAC	4 cut(s)	311, 478, 1700, 1734
TseI	GCWGC	4 cut(s)	405, 628, 1193, 1868
Tsp45I	GTSAC	4 cut(s)	311, 478, 1700, 1734
TspGWI	ACGGA	1 cut(s)	2532
TspRI	CASTG	6 cut(s)	483, 1280, 2170, 2253, 2434, 2557
Tth111I	GACNNNGTC	1 cut(s)	1275
Van91I	CCANNNNNTGG	3 cut(s)	350, 2059, 2628
VpaK11BI	GGWCC	1 cut(s)	2662
VspI	ATTAAT	1 cut(s)	693
XapI	RAATTY	5 cut(s)	602, 650, 1009, 1158, 1601
XbaI	TCTAGA	3 cut(s)	1454, 1526, 1804
XceI	RCATGY	2 cut(s)	1138, 2072
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	1 cut(s)	1520
XmnI	GAANNNNTTC	3 cut(s)	438, 602, 2039
XspI	CTAG	7 cut(s)	576, 786, 954, 1422, 1455, 1527, 1805
ZrmI	AGTACT	2 cut(s)	2152, 2175
Zsp2I	ATGCAT	5 cut(s)	700, 888, 1140, 1308, 2074

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.