Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

7013532 .. 7020460

Gene Structure 6929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g07030.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGGTTTCAGCCCCGGCGGCGGCGGCAATGGTTCGGCTAATAACAACAACAACGACAACAGTACTAGTCATCATAACAATATTAATAATAATACTAGTAGTGGGGGGTGCTGCAACATGAGCCTCAAGTGTAGACTGTGTAAATGGAGATGCCTGATGTCTTCGGGGTTTGTGTTCTTTTTCGGGTGTTGCGTGCTGTTCGGATCAGTCGCCACTTTTTATGTCTGGTTCGCTTTCACGCCTTATTATTACGCTCGGGGCACTACGCCCTCTGCGCTTGGGTGTCAGGAAGACAATGAAGGCTCTTGGTCTGTTGGTGTTTTCTTCGGTGACTCTCCCTTTCACCTCAAGCCCATAGAAGCTATGAATGTATGGAGAAACAAGAGTGCCGCTTGGCCAGTGGCAAACCCTGTTGTGACTTGTGCTTCACTTTCTGAGTCTGGTTTCCCGAGCAATTTTGTTGCTGATCCTTTCCTTTATGTCCAGGGTGATACTTTGTACATGTTCTATGAAACCAAAAATTCTATTACTATGCAAGGAGATATTGGTGTTTCAAAAAGTTCCGATAAAGGAGCAACATGGCAGCAATTAGGCATTGCCTTGGATGAAGAGTGGCACCTCTCTTATCCATATGTCTTCCCCTACCTTGGCCAAATATATATGATGCCCGAGAGCAGCATGAATGGCGAAGTTCGTCTGTATCAAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAAAAGGTGATCTTGAAAAAGCCTCTTGTTGACTCATTCCTTATCAATTATGATGGAGCCTATTGGCTTTTCGGTTCAGATCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAGCCACACAAGAAGAACCCTATATATAATGGTGACAGGAGTGTTGGGGCTCGAAATGGAGGCAGACCATTTTTCTACAATGGGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGTAAACGTGTGCGCACCTTTAAGGTGGAAGTTCTTACGAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTACCAGCACCAACTAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACCGGGGGTTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACATAGGTTTATTGTTGGTACTGCCTCAGTTGCCGTTGTCGCTATACTTGTTATATCACTAGGTGTACTGCTTGGAGCTGTGAAGTGCATGATTCCCCTTAGTTGGTGCACTCACAACTCAGGTAAGAGAAGTGATGTATTCTTGGCTTGTGAAAGGTCATATTTTTGTTCGTCCAAACTGAGACGTTTTTGCAGCCGCTTGAACAGATCAGTTTCTTTCCTGAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCAATAAAAGGTCACTACTCACAGTTCACATTATTAACAATGACTTATGATGCCCGTCTTTGGAATTTGAAAATGTATGTGAAACACTATTCTAGATGTTCATCAGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGAATACCTCCTGAAGTGAGTGATTTTGATTCAGCAGTGCCCGTGAGGATCAGAGTAGAGAAACAGAATTCCCTGAATAACCGGTTCAGGTTGGACTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACTTGCAATGATATTGAGAGAGGATTCCGGATATGGCGTGAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTAATTGATGGAAGCCCATTGAAGTACAGAGGTGAGAAATATGCTCGGAGTCATAAAGGCTATAATATGATTCTCACAGGAGCGGCTTTCCTTGAAAGCCAAGTTGCCTTTGAGAGGTATTGGAGTGAAGAAGCTAGCCAAGGGAGGGACTTAGTGGACAAGTTTTTCAACTGTGAGGACGTGCTTATGAATTACTTGTATGCAAATGCTAGCTCATCTCAGAATGTGGAGTATGTGAGGCCAGCATGGGCAATAGATACTTCAAAATTATCTGGTGCTGCTATTAGCCGAAATACACAAGTTCACTACAACAAGAGGAGCAACTGCCTGGTGAAGTTTTCTGAGATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

779

Amino Acids

87.61

Weight (kDa)

8.86

Isoelectric Point (pI)

41.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	95 - 398	5.2e-177	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	532 - 767	1.9e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1025
AccB1I	GGYRCC	2 cut(s)	615, 830
AccB7I	CCANNNNNTGG	1 cut(s)	726
AccBSI	CCGCTC	1 cut(s)	2009
AccI	GTMKAC	1 cut(s)	133
AccIII	TCCGGA	1 cut(s)	1878
AciI	CCGC	8 cut(s)	18, 21, 24, 390, 1414, 1545, 2009, 2314
AclWI	GGATC	4 cut(s)	211, 461, 1760, 1908
AcoI	YGGCCR	2 cut(s)	395, 649
AcsI	RAATTY	4 cut(s)	520, 1633, 1771, 2303
AcuI	CTGAAG	1 cut(s)	1737
AdeI	CACNNNGTG	1 cut(s)	1280
AfaI	GTAC	8 cut(s)	64, 500, 863, 1200, 1218, 1237, 1284, 1952
AflIII	ACRYGT	2 cut(s)	501, 1018
AgeI	ACCGGT	1 cut(s)	1785
AgsI	TTSAA	9 cut(s)	555, 751, 1073, 1420, 1639, 1948, 2021, 2095, 2190
AhlI	ACTAGT	3 cut(s)	65, 95, 1477
AjiI	CACGTC	1 cut(s)	2107
AjnI	CCWGG	2 cut(s)	483, 2253
AjuI	GAANNNNNNNTTGG	2 cut(s)	833, 865
AloI	GAACNNNNNNTCC	2 cut(s)	1464, 1496
AluBI	AGCT	9 cut(s)	362, 870, 1295, 1514, 1565, 1820, 1831, 2060, 2139
AluI	AGCT	9 cut(s)	362, 870, 1295, 1514, 1565, 1820, 1831, 2060, 2139
Alw21I	GWGCWC	2 cut(s)	1328, 1523
Alw26I	GTCTC	2 cut(s)	1185, 1393
Alw44I	GTGCAC	2 cut(s)	1324, 1519
AlwI	GGATC	4 cut(s)	211, 461, 1760, 1908
Ama87I	CYCGRG	4 cut(s)	255, 448, 668, 1815
Aor13HI	TCCGGA	1 cut(s)	1878
AoxI	GGCC	4 cut(s)	395, 649, 1084, 2165
ApaLI	GTGCAC	2 cut(s)	1324, 1519
ApeKI	GCWGC	6 cut(s)	111, 583, 675, 1410, 1511, 2204
ApoI	RAATTY	4 cut(s)	520, 1633, 1771, 2303
AseI	ATTAAT	1 cut(s)	84
AsiGI	ACCGGT	1 cut(s)	1785
AspLEI	GCGC	3 cut(s)	277, 1026, 2295
AspS9I	GGNCC	2 cut(s)	881, 1084
AsuC2I	CCSGG	4 cut(s)	15, 1165, 1898, 1924
AsuHPI	GGTGA	7 cut(s)	335, 341, 500, 754, 932, 1970, 2269
AsuNHI	GCTAGC	2 cut(s)	2060, 2135
AvaI	CYCGRG	4 cut(s)	255, 448, 668, 1815
AvaII	GGWCC	1 cut(s)	881
BaeGI	GKGCMC	4 cut(s)	263, 1328, 1523, 1746
BalI	TGGCCA	2 cut(s)	397, 651
BanI	GGYRCC	2 cut(s)	615, 830
BanII	GRGCYC	1 cut(s)	940
BbsI	GAAGAC	4 cut(s)	153, 297, 628, 1480
Bbv12I	GWGCWC	2 cut(s)	1328, 1523
BbvI	GCAGC	6 cut(s)	98, 595, 687, 1422, 1523, 2191
BccI	CCATC	6 cut(s)	782, 1143, 1181, 1928, 2303, 2315
BceAI	ACGGC	1 cut(s)	1235
BciT130I	CCWGG	2 cut(s)	485, 2255
BcnI	CCSGG	4 cut(s)	15, 1165, 1898, 1924
BcoDI	GTCTC	2 cut(s)	1185, 1393
BcuI	ACTAGT	3 cut(s)	65, 95, 1477
BfaI	CTAG	8 cut(s)	66, 96, 734, 1277, 1478, 1662, 2061, 2136
BglI	GCCNNNNNGGC	1 cut(s)	18
BmcAI	AGTACT	1 cut(s)	64
Bme1390I	CCNGG	6 cut(s)	15, 485, 1165, 1898, 1924, 2255
Bme18I	GGWCC	1 cut(s)	881
BmeT110I	CYCGRG	4 cut(s)	255, 448, 668, 1815
BmgBI	CACGTC	1 cut(s)	2107
BmgT120I	GGNCC	2 cut(s)	881, 1084
BmiI	GGNNCC	4 cut(s)	617, 793, 832, 882
BmrFI	CCNGG	6 cut(s)	15, 485, 1165, 1898, 1924, 2255
BmsI	GCATC	3 cut(s)	140, 654, 1609
BmtI	GCTAGC	2 cut(s)	2064, 2139
BpiI	GAAGAC	4 cut(s)	153, 297, 628, 1480
BpmI	CTGGAG	2 cut(s)	1227, 1847
BpuEI	CTTGAG	2 cut(s)	110, 332
BpuMI	CCSGG	4 cut(s)	15, 1165, 1898, 1924
BsaBI	GATNNNNATC	1 cut(s)	1669
BsaI	GGTCTC	1 cut(s)	1185
BsaJI	CCNNGG	8 cut(s)	13, 484, 600, 646, 884, 1164, 1922, 2065
BsaWI	WCCGGW	2 cut(s)	1785, 1878
BsaXI	ACNNNNNCTCC	4 cut(s)	1182, 1200, 1212, 1230
Bse118I	RCCGGY	1 cut(s)	1785
Bse1I	ACTGG	1 cut(s)	398
Bse3DI	GCAATG	5 cut(s)	34, 594, 731, 1117, 1864
Bse8I	GATNNNNATC	1 cut(s)	1669
BseAI	TCCGGA	1 cut(s)	1878
BseBI	CCWGG	2 cut(s)	485, 2255
BseDI	CCNNGG	8 cut(s)	13, 484, 600, 646, 884, 1164, 1922, 2065
BseGI	GGATG	4 cut(s)	610, 1192, 2326, 2335
BseJI	GATNNNNATC	1 cut(s)	1669
BseMI	GCAATG	5 cut(s)	34, 594, 731, 1117, 1864
BseMII	CTCAG	8 cut(s)	426, 724, 1257, 1350, 1388, 1430, 2159, 2259
BseNI	ACTGG	1 cut(s)	398
BseRI	GAGGAG	1 cut(s)	2257
BseSI	GKGCMC	4 cut(s)	263, 1328, 1523, 1746
BseXI	GCAGC	6 cut(s)	98, 595, 687, 1422, 1523, 2191
BseYI	CCCAGC	1 cut(s)	2288
BsgI	GTGCAG	1 cut(s)	1575
BshFI	GGCC	4 cut(s)	397, 651, 1086, 2167
BshNI	GGYRCC	2 cut(s)	615, 830
BshTI	ACCGGT	1 cut(s)	1785
BsiHKAI	GWGCWC	2 cut(s)	1328, 1523
BsiHKCI	CYCGRG	4 cut(s)	255, 448, 668, 1815
BsiSI	CCGG	6 cut(s)	15, 1164, 1786, 1879, 1898, 1924
BslFI	GGGAC	2 cut(s)	1061, 2087
BsmAI	GTCTC	2 cut(s)	1185, 1393
BsmBI	CGTCTC	1 cut(s)	1393
BsmFI	GGGAC	2 cut(s)	1061, 2087
BsnI	GGCC	4 cut(s)	397, 651, 1086, 2167
Bso31I	GGTCTC	1 cut(s)	1185
BsoBI	CYCGRG	4 cut(s)	255, 448, 668, 1815
Bsp1286I	GDGCHC	5 cut(s)	263, 940, 1328, 1523, 1746
Bsp13I	TCCGGA	1 cut(s)	1878
Bsp1407I	TGTACA	2 cut(s)	498, 1216
Bsp143I	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
BspACI	CCGC	8 cut(s)	18, 21, 24, 390, 1414, 1545, 2009, 2314
BspANI	GGCC	4 cut(s)	397, 651, 1086, 2167
BspCNI	CTCAG	8 cut(s)	427, 723, 1256, 1349, 1389, 1431, 2158, 2260
BspEI	TCCGGA	1 cut(s)	1878
BspLI	GGNNCC	4 cut(s)	617, 793, 832, 882
BspOI	GCTAGC	2 cut(s)	2064, 2139
BspPI	GGATC	4 cut(s)	211, 461, 1760, 1908
BspT107I	GGYRCC	2 cut(s)	615, 830
BspTNI	GGTCTC	1 cut(s)	1185
BsrBI	CCGCTC	1 cut(s)	2009
BsrDI	GCAATG	5 cut(s)	34, 594, 731, 1117, 1864
BsrFI	RCCGGY	1 cut(s)	1785
BsrGI	TGTACA	2 cut(s)	498, 1216
BsrI	ACTGG	1 cut(s)	398
BssAI	RCCGGY	1 cut(s)	1785
BssECI	CCNNGG	8 cut(s)	13, 484, 600, 646, 884, 1164, 1922, 2065
BssMI	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
BssT1I	CCWWGG	4 cut(s)	600, 646, 884, 2065
Bst2UI	CCWGG	2 cut(s)	485, 2255
Bst4CI	ACNGT	9 cut(s)	62, 138, 821, 849, 866, 998, 1196, 1593, 2099
Bst6I	CTCTTC	1 cut(s)	603
BstAUI	TGTACA	2 cut(s)	498, 1216
BstC8I	GCNNGC	5 cut(s)	194, 872, 2062, 2137, 2169
BstENI	CCTNNNNNAGG	1 cut(s)	2038
BstF5I	GGATG	4 cut(s)	610, 1192, 2326, 2335
BstHHI	GCGC	3 cut(s)	277, 1026, 2295
BstKTI	GATC	7 cut(s)	206, 469, 747, 817, 1427, 1755, 1903
BstMAI	GTCTC	2 cut(s)	1185, 1393
BstMBI	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
BstMWI	GCNNNNNNNGC	8 cut(s)	18, 24, 120, 274, 684, 1247, 1256, 1562
BstNI	CCWGG	2 cut(s)	485, 2255
BstNSI	RCATGY	1 cut(s)	505
BstSCI	CCNGG	6 cut(s)	13, 483, 1163, 1896, 1922, 2253
BstSLI	GKGCMC	4 cut(s)	263, 1328, 1523, 1746
BstV1I	GCAGC	6 cut(s)	98, 595, 687, 1422, 1523, 2191
BstV2I	GAAGAC	4 cut(s)	153, 297, 628, 1480
BsuRI	GGCC	4 cut(s)	397, 651, 1086, 2167
BtrI	CACGTC	1 cut(s)	2107
BtsCI	GGATG	4 cut(s)	610, 1192, 2326, 2335
BtsI	GCAGTG	2 cut(s)	1555, 1746
BtsIMutI	CAGTG	4 cut(s)	405, 826, 1555, 1746
Cac8I	GCNNGC	5 cut(s)	194, 872, 2062, 2137, 2169
CfoI	GCGC	3 cut(s)	277, 1026, 2295
Cfr10I	RCCGGY	1 cut(s)	1785
Cfr13I	GGNCC	2 cut(s)	881, 1084
Csp6I	GTAC	8 cut(s)	63, 499, 862, 1199, 1217, 1236, 1283, 1951
CspAI	ACCGGT	1 cut(s)	1785
CviAII	CATG	7 cut(s)	118, 502, 579, 679, 721, 1306, 2172
CviQI	GTAC	8 cut(s)	63, 499, 862, 1199, 1217, 1236, 1283, 1951
DpnI	GATC	7 cut(s)	205, 468, 746, 816, 1426, 1754, 1902
DpnII	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
DraIII	CACNNNGTG	1 cut(s)	1280
EaeI	YGGCCR	2 cut(s)	395, 649
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
EciI	GGCGGA	1 cut(s)	2329
Eco130I	CCWWGG	4 cut(s)	600, 646, 884, 2065
Eco24I	GRGCYC	1 cut(s)	940
Eco31I	GGTCTC	1 cut(s)	1185
Eco47I	GGWCC	1 cut(s)	881
Eco57I	CTGAAG	1 cut(s)	1737
Eco88I	CYCGRG	4 cut(s)	255, 448, 668, 1815
EcoNI	CCTNNNNNAGG	1 cut(s)	2038
EcoO109I	RGGNCCY	1 cut(s)	881
EcoRI	GAATTC	1 cut(s)	1771
EcoRII	CCWGG	2 cut(s)	483, 2253
EcoT14I	CCWWGG	4 cut(s)	600, 646, 884, 2065
EcoT38I	GRGCYC	1 cut(s)	940
ErhI	CCWWGG	4 cut(s)	600, 646, 884, 2065
Esp3I	CGTCTC	1 cut(s)	1393
FaeI	CATG	7 cut(s)	121, 505, 582, 682, 724, 1309, 2175
FalI	AAGNNNNNCTT	2 cut(s)	731, 763
FaqI	GGGAC	2 cut(s)	1061, 2087
FatI	CATG	7 cut(s)	117, 501, 578, 678, 720, 1305, 2171
FauNDI	CATATG	1 cut(s)	631
FblI	GTMKAC	1 cut(s)	133
FokI	GGATG	3 cut(s)	617, 1199, 2333
FriOI	GRGCYC	1 cut(s)	940
FspAI	RTGCGCAY	1 cut(s)	1025
FspBI	CTAG	8 cut(s)	66, 96, 734, 1277, 1478, 1662, 2061, 2136
FspI	TGCGCA	1 cut(s)	1025
GlaI	GCGC	3 cut(s)	276, 1025, 2294
GsaI	CCCAGC	1 cut(s)	2292
GsuI	CTGGAG	2 cut(s)	1227, 1847
HaeIII	GGCC	4 cut(s)	397, 651, 1086, 2167
HapII	CCGG	6 cut(s)	15, 1164, 1786, 1879, 1898, 1924
HhaI	GCGC	3 cut(s)	277, 1026, 2295
Hin1II	CATG	7 cut(s)	121, 505, 582, 682, 724, 1309, 2175
Hin6I	GCGC	3 cut(s)	275, 1024, 2293
HinP1I	GCGC	3 cut(s)	275, 1024, 2293
HincII	GTYRAC	1 cut(s)	766
HindII	GTYRAC	1 cut(s)	766
HindIII	AAGCTT	1 cut(s)	1563
HpaII	CCGG	6 cut(s)	15, 1164, 1786, 1879, 1898, 1924
HphI	GGTGA	7 cut(s)	335, 341, 500, 754, 932, 1970, 2269
Hpy188I	TCNGA	8 cut(s)	203, 436, 565, 814, 1757, 1974, 2148, 2269
HpyAV	CCTTC	3 cut(s)	293, 1212, 2311
HpyCH4III	ACNGT	9 cut(s)	62, 138, 821, 849, 866, 998, 1196, 1593, 2099
HpyCH4IV	ACGT	4 cut(s)	1007, 1018, 1402, 2106
HpyF10VI	GCNNNNNNNGC	8 cut(s)	18, 24, 120, 274, 684, 1247, 1256, 1562
HpySE526I	ACGT	4 cut(s)	1007, 1018, 1402, 2106
Hsp92II	CATG	7 cut(s)	121, 505, 582, 682, 724, 1309, 2175
HspAI	GCGC	3 cut(s)	275, 1024, 2293
Kpn2I	TCCGGA	1 cut(s)	1878
Kzo9I	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
LmnI	GCTCC	6 cut(s)	572, 791, 1292, 1828, 2006, 2244
Lsp1109I	GCAGC	6 cut(s)	98, 595, 687, 1422, 1523, 2191
LweI	GCATC	3 cut(s)	140, 654, 1609
MaeI	CTAG	8 cut(s)	66, 96, 734, 1277, 1478, 1662, 2061, 2136
MaeII	ACGT	4 cut(s)	1007, 1018, 1402, 2106
MaeIII	GTNAC	4 cut(s)	329, 415, 920, 1580
MalI	GATC	7 cut(s)	205, 468, 746, 816, 1426, 1754, 1902
MbiI	CCGCTC	1 cut(s)	2009
MboI	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
MboII	GAAGA	9 cut(s)	153, 302, 316, 620, 628, 913, 1485, 1571, 2066
MhlI	GDGCHC	5 cut(s)	263, 940, 1328, 1523, 1746
MlsI	TGGCCA	2 cut(s)	397, 651
MluNI	TGGCCA	2 cut(s)	397, 651
MlyI	GAGTC	7 cut(s)	326, 446, 724, 761, 1793, 1807, 1984
MmeI	TCCRAC	3 cut(s)	831, 1151, 1776
Mox20I	TGGCCA	2 cut(s)	397, 651
MroI	TCCGGA	1 cut(s)	1878
MscI	TGGCCA	2 cut(s)	397, 651
MseI	TTAA	5 cut(s)	84, 1032, 1452, 1530, 1604
MslI	CAYNNNNRTG	2 cut(s)	1143, 1847
Msp20I	TGGCCA	2 cut(s)	397, 651
MspI	CCGG	6 cut(s)	15, 1164, 1786, 1879, 1898, 1924
MspR9I	CCNGG	6 cut(s)	15, 485, 1165, 1898, 1924, 2255
MvaI	CCWGG	2 cut(s)	485, 2255
MwoI	GCNNNNNNNGC	8 cut(s)	18, 24, 120, 274, 684, 1247, 1256, 1562
NciI	CCSGG	4 cut(s)	15, 1165, 1898, 1924
NdeI	CATATG	1 cut(s)	631
NdeII	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
NheI	GCTAGC	2 cut(s)	2060, 2135
NlaIII	CATG	7 cut(s)	121, 505, 582, 682, 724, 1309, 2175
NlaIV	GGNNCC	4 cut(s)	617, 793, 832, 882
NmuCI	GTSAC	4 cut(s)	329, 415, 920, 1580
NsbI	TGCGCA	1 cut(s)	1025
NspI	RCATGY	1 cut(s)	505
PaeR7I	CTCGAG	1 cut(s)	1815
PciI	ACATGT	1 cut(s)	501
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PfeI	GAWTC	6 cut(s)	973, 1211, 1309, 1733, 1875, 1996
PflMI	CCANNNNNTGG	1 cut(s)	726
PinAI	ACCGGT	1 cut(s)	1785
PleI	GAGTC	7 cut(s)	326, 445, 724, 761, 1793, 1807, 1983
PpsI	GAGTC	7 cut(s)	326, 445, 724, 761, 1793, 1807, 1983
PpuMI	RGGWCCY	1 cut(s)	881
PscI	ACATGT	1 cut(s)	501
PshBI	ATTAAT	1 cut(s)	84
Psp5II	RGGWCCY	1 cut(s)	881
Psp6I	CCWGG	2 cut(s)	483, 2253
PspFI	CCCAGC	1 cut(s)	2288
PspGI	CCWGG	2 cut(s)	483, 2253
PspN4I	GGNNCC	4 cut(s)	617, 793, 832, 882
PspPI	GGNCC	2 cut(s)	881, 1084
PspPPI	RGGWCCY	1 cut(s)	881
PspXI	VCTCGAGB	1 cut(s)	1815
RsaI	GTAC	8 cut(s)	64, 500, 863, 1200, 1218, 1237, 1284, 1952
RsaNI	GTAC	8 cut(s)	63, 499, 862, 1199, 1217, 1236, 1283, 1951
RseI	CAYNNNNRTG	2 cut(s)	1143, 1847
SaqAI	TTAA	5 cut(s)	84, 1032, 1452, 1530, 1604
Sau3AI	GATC	7 cut(s)	203, 466, 744, 814, 1424, 1752, 1900
Sau96I	GGNCC	2 cut(s)	881, 1084
ScaI	AGTACT	1 cut(s)	64
SchI	GAGTC	7 cut(s)	326, 446, 724, 761, 1793, 1807, 1984
ScrFI	CCNGG	6 cut(s)	15, 485, 1165, 1898, 1924, 2255
SduI	GDGCHC	5 cut(s)	263, 940, 1328, 1523, 1746
SfaNI	GCATC	3 cut(s)	140, 654, 1609
Sfr274I	CTCGAG	1 cut(s)	1815
SinI	GGWCC	1 cut(s)	881
SlaI	CTCGAG	1 cut(s)	1815
SmiMI	CAYNNNNRTG	2 cut(s)	1143, 1847
SmlI	CTYRAG	3 cut(s)	125, 347, 1815
SmoI	CTYRAG	3 cut(s)	125, 347, 1815
SpeI	ACTAGT	3 cut(s)	65, 95, 1477
SsiI	CCGC	8 cut(s)	18, 21, 24, 390, 1414, 1545, 2009, 2314
SspI	AATATT	1 cut(s)	82
SspMI	CTAG	8 cut(s)	66, 96, 734, 1277, 1478, 1662, 2061, 2136
StyD4I	CCNGG	6 cut(s)	13, 483, 1163, 1896, 1922, 2253
StyI	CCWWGG	4 cut(s)	600, 646, 884, 2065
TaaI	ACNGT	9 cut(s)	62, 138, 821, 849, 866, 998, 1196, 1593, 2099
TaiI	ACGT	4 cut(s)	1010, 1021, 1405, 2109
TaqI	TCGA	3 cut(s)	940, 1143, 1816
TatI	WGTACW	5 cut(s)	62, 498, 1216, 1282, 1950
TauI	GCSGC	7 cut(s)	21, 24, 27, 392, 1416, 1548, 2012
TfiI	GAWTC	6 cut(s)	973, 1211, 1309, 1733, 1875, 1996
Tru1I	TTAA	5 cut(s)	84, 1032, 1452, 1530, 1604
Tru9I	TTAA	5 cut(s)	84, 1032, 1452, 1530, 1604
TscAI	CASTG	4 cut(s)	405, 826, 1555, 1746
TseFI	GTSAC	4 cut(s)	329, 415, 920, 1580
TseI	GCWGC	6 cut(s)	111, 583, 675, 1410, 1511, 2204
Tsp45I	GTSAC	4 cut(s)	329, 415, 920, 1580
TspDTI	ATGAA	8 cut(s)	312, 380, 525, 621, 695, 1071, 1659, 2129
TspRI	CASTG	4 cut(s)	405, 826, 1555, 1746
Van91I	CCANNNNNTGG	1 cut(s)	726
VneI	GTGCAC	2 cut(s)	1324, 1519
VpaK11BI	GGWCC	1 cut(s)	881
VspI	ATTAAT	1 cut(s)	84
XagI	CCTNNNNNAGG	1 cut(s)	2038
XapI	RAATTY	4 cut(s)	520, 1633, 1771, 2303
XbaI	TCTAGA	2 cut(s)	733, 1661
XceI	RCATGY	1 cut(s)	505
XhoI	CTCGAG	1 cut(s)	1815
XmiI	GTMKAC	1 cut(s)	133
XspI	CTAG	8 cut(s)	66, 96, 734, 1277, 1478, 1662, 2061, 2136
ZrmI	AGTACT	1 cut(s)	64

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.