Prupe.2G096900_v2.0.a1

heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
15214434 .. 15220364
5931 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G096900.1

Sequence Viewer

Length: 2343 bp
ATGGGTTCGAGTCCGGCGGGGAGCGGTTGCGGTGGTGTTTCCGGTGGTAGTGTTGTCGGCGGTTGTGGCGGCGGTGCTGTGGGTGGTTGTACCAATGGTACAAGCAATAACAGCTGCTGCAACGTGAGCCTCAAGTGTAGGTGTAGATGGAGGTGTTTAATGTCCTCGGGGTTCGTTTTCTTCTTGGGCTGCTTCGTGTTGTTCGGATCAGTGGCCACGCTCTACGTCTGGTTCGCTTTCACGCCCTATTATGCTCGTACGGCCTTGTCGTCTTCCTCCATGCTTGGTTGTCAGGAGGACAATGAAGGTTCCTGGTCTGTCGGTGTTTTCTTCGGTGACTCTCCTTTTTCCCTCAAACCCATTGAAGCTATGAATGTATGGAGGGACAAAACTGCGGCTTGGCCAGTGGCCAACCCAGTTGTGACTTGTGCTTCAGTTTCTGATGCTGGTTTTCCAAGTAATTTTGTTGCTGATCCTTTCCTTTATGTCCAGGGAGATATTTTTTACTTGTTCTATGAAACCAAGAATTCAATCACCATGCAAGGAGATATAGGGGTTTCAAAAAGTACCGATAAGGGAGCAACATGGCAGCAATTGGGCATTGCCTTGGATGAAGAGTGGCATCTCTCTTATCCATATGTCTTCAACTACCATGGCCAAATTTATATGATGCCTGAGAGCAGTATGAAAGGAGAGCTTCGTCTGTACCGAGCACTCAATTTTCCAATGCAATGGACTCTGGAAAAAGTGATCATGAAAAAGCCTCTTGTTGATTCCTTCATAATCAATTATAATGGAGCTTATTGGCTTTTTGGTTCAGATCACAGTGGATTTGGTACCAGAAAAAATGGACAGTTGGAAATCTGGTATAGCAGCTCACCGCTTGGTCCTTGGAAACCACACAAAAAGAACCCTGTATATAATGTTGATAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTCTACAATGGGAATCTTTATCGTTTTGGTCAAGACTGTGCTGAAACATATGGGAGAAGAGTGCGCACCTTCAAGGTGGAAGTTCTTACCAAAGACGAATACAAAGAAGTTGAAGTCTCCTTAGGCTTAATAGAGCCAAGTAAGGGGCGCAATGCTTGGAATGGTGCTCGCCATCATCATCTTGATGTGCAGCAGCTGAATACTGGTGAGTGGATTGGAGTGATGGATGGAGACCGGGTACCTTCCGGAGATTCAGTTCGGAGGTTTATTCTTGGCAGTGCTTCAGTTGCGATTGTTGCTGTACTTGTTATATTACTGGGAGTACTACTTGGAGCTGTGAAGTGCCTAATTCCCCTCAATTGGTGCACTTACAACTCGGGTAAGAGGAGTGATGCATTCTTGGCCTGGGAAAGGTCACATTTGTTTTCTTCGAAAGTGAGACGGTTTTGCAGCCGCTTGAACAGAGAAGTTTCATTCTTCAGAGGTCGGATTAAACCTAATACCTGTGCTGGAAGACTGGTTCTTGCTATACTTTTGGCATGTGGAGTCGCAGCTATGTGCACAGGGGTTAAATATATATATGGTGGCAGTGGTGCAGAAGAAGCTTACCCATTGAAAGGTCACTACTCAGAGTTCACCTTATTAACAATGACCTATGATGCTCGTCTTTGGAATTTGAAAATGTATGTTAAACACTATTCTAGATGTTCCTCAGTGCGAGAAATCATTGTGGTGTGGAACAAGGGAATACCTCCTAAAGTAAGTGATTTTGACTCCACAGTGCCAGTTAGGATCAGAGTAGAGAAACAAAACTCACTTAATAATCGGTTCAAGATGGATTCTTTGATAAAGACACGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACTTGCAATGATATTGAGCGGGGATTCAGGATATGGCGTCAACACCCAGATCGTATTGTGGGTTTCTACCCCCGGCTAATTGATGGAAGCCCATTGAAGTATAGAGGTGAGAAATTTGCCCGGACTCATAAAGGTTACAACATGATTCTCACTGGGGCAGCTTTCCTTGATAGTCAAGTAGCTTTCGAAAGGTATTGGGGTGAAGAAGCCCGCCAAGCTAGGGAAGTGGTGGACAAGTATTTCAACTGTGAGGACGTGCTGATGAATTACTTGTATGCAAATGCAAGCTCGTCTAAGACCGTGGAGTATGTGAGGCCAGCGTGGGCAATCGATACGTCCAAGTTATCTGGTGCTGCAATCAGCCGAAATACACGGGTTCACTACCATATAAGGAGCAACTGCCTCCTGAAGTTTTCTGAGATGTATGGAAGTTTGACTGGGCGCAAGTGGGAATTTGATGGCCGGAAGGATGGTTGGGATGTATAG

Protein Analysis

781

Amino Acids

87.68

Weight (kDa)

9.07

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
Acc16I TGCGCA 1 cut(s) 1031
Acc65I GGTACC 2 cut(s) 836, 1204
AccB1I GGYRCC 2 cut(s) 836, 1204
AccBSI CCGCTC 2 cut(s) 24, 1876
AccIII TCCGGA 1 cut(s) 1211
AclWI GGATC 3 cut(s) 214, 467, 1766
AcoI YGGCCR 5 cut(s) 213, 401, 408, 655, 2317
AcsI RAATTY 5 cut(s) 526, 660, 1639, 1970, 2309
AcuI CTGAAG 4 cut(s) 417, 1233, 1429, 2285
AcyI GRCGYC 1 cut(s) 1894
AfaI GTAC 9 cut(s) 91, 100, 259, 568, 707, 838, 1206, 1269, 1290
AfiI CCNNNNNNNGG 5 cut(s) 1109, 1326, 1377, 1583, 2077
AjiI CACGTC 1 cut(s) 2113
AjnI CCWGG 3 cut(s) 311, 489, 1370
AloI GAACNNNNNNTCC 4 cut(s) 1206, 1238, 1470, 1502
Alw21I GWGCWC 4 cut(s) 715, 1135, 1334, 1529
Alw26I GTCTC 3 cut(s) 1087, 1191, 1399
Alw44I GTGCAC 2 cut(s) 1330, 1525
AlwI GGATC 3 cut(s) 214, 467, 1766
AlwNI CAGNNNCTG 3 cut(s) 117, 440, 1162
Ama87I CYCGRG 2 cut(s) 166, 1342
Aor13HI TCCGGA 1 cut(s) 1211
AoxI GGCC 8 cut(s) 213, 261, 401, 408, 655, 1368, 2171, 2317
ApaLI GTGCAC 2 cut(s) 1330, 1525
ApoI RAATTY 5 cut(s) 526, 660, 1639, 1970, 2309
Asp718I GGTACC 2 cut(s) 836, 1204
AspLEI GCGC 3 cut(s) 1032, 1116, 2301
AspS9I GGNCC 1 cut(s) 887
AsuC2I CCSGG 3 cut(s) 1202, 1930, 1978
AsuHPI GGTGA 7 cut(s) 347, 526, 870, 1184, 1594, 1976, 2069
AsuII TTCGAA 2 cut(s) 1397, 2043
AvaI CYCGRG 2 cut(s) 166, 1342
AvaII GGWCC 1 cut(s) 887
AxyI CCTNAGG 1 cut(s) 1087
BaeGI GKGCMC 2 cut(s) 1334, 1529
BalI TGGCCA 4 cut(s) 215, 403, 410, 657
BanI GGYRCC 2 cut(s) 836, 1204
BanII GRGCYC 1 cut(s) 946
BauI CACGAG 1 cut(s) 1821
BbsI GAAGAC 3 cut(s) 264, 634, 1486
Bbv12I GWGCWC 4 cut(s) 715, 1135, 1334, 1529
BccI CCATC 8 cut(s) 141, 1146, 1183, 1187, 1795, 1934, 2309, 2321
BceAI ACGGC 1 cut(s) 276
BciT130I CCWGG 3 cut(s) 313, 491, 1372
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 3 cut(s) 1202, 1930, 1978
BcoDI GTCTC 3 cut(s) 1087, 1191, 1399
BfaI CTAG 2 cut(s) 1668, 2076
BmcAI AGTACT 1 cut(s) 1290
Bme1390I CCNGG 6 cut(s) 313, 491, 1202, 1372, 1930, 1978
Bme18I GGWCC 1 cut(s) 887
BmeT110I CYCGRG 2 cut(s) 166, 1342
BmgBI CACGTC 1 cut(s) 2113
BmgT120I GGNCC 1 cut(s) 887
BmiI GGNNCC 3 cut(s) 310, 838, 1206
BmrFI CCNGG 6 cut(s) 313, 491, 1202, 1372, 1930, 1978
BmrI ACTGGG 4 cut(s) 410, 1292, 2019, 2304
BmsI GCATC 5 cut(s) 433, 631, 660, 1348, 1615
BmuI ACTGGG 4 cut(s) 410, 1292, 2019, 2304
BpiI GAAGAC 3 cut(s) 264, 634, 1486
BpmI CTGGAG 1 cut(s) 1853
Bpu14I TTCGAA 2 cut(s) 1397, 2043
BpuEI CTTGAG 1 cut(s) 116
BpuMI CCSGG 3 cut(s) 1202, 1930, 1978
Bsa29I ATCGAT 1 cut(s) 2187
BsaHI GRCGYC 1 cut(s) 1894
BsaI GGTCTC 1 cut(s) 1191
BsaJI CCNNGG 8 cut(s) 165, 490, 606, 652, 890, 1371, 1928, 2157
BsaWI WCCGGW 2 cut(s) 41, 1211
BsaXI ACNNNNNCTCC 4 cut(s) 1188, 1206, 1218, 1236
Bsc4I CCNNNNNNNGG 5 cut(s) 1109, 1326, 1377, 1583, 2077
Bse1I ACTGG 8 cut(s) 404, 416, 1174, 1287, 1488, 1751, 2014, 2299
Bse21I CCTNAGG 1 cut(s) 1087
Bse3DI GCAATG 4 cut(s) 600, 737, 1123, 1870
BseAI TCCGGA 1 cut(s) 1211
BseBI CCWGG 3 cut(s) 313, 491, 1372
BseCI ATCGAT 1 cut(s) 2187
BseDI CCNNGG 8 cut(s) 165, 490, 606, 652, 890, 1371, 1928, 2157
BseGI GGATG 4 cut(s) 616, 1198, 2332, 2341
BseLI CCNNNNNNNGG 5 cut(s) 1109, 1326, 1377, 1583, 2077
BseMI GCAATG 4 cut(s) 600, 737, 1123, 1870
BseMII CTCAG 4 cut(s) 666, 1608, 1692, 2265
BseNI ACTGG 8 cut(s) 404, 416, 1174, 1287, 1488, 1751, 2014, 2299
BseRI GAGGAG 1 cut(s) 1366
BseSI GKGCMC 2 cut(s) 1334, 1529
BsgI GTGCAG 2 cut(s) 1175, 1581
BshFI GGCC 8 cut(s) 215, 263, 403, 410, 657, 1370, 2173, 2319
BshNI GGYRCC 2 cut(s) 836, 1204
BshVI ATCGAT 1 cut(s) 2187
BsiHKAI GWGCWC 4 cut(s) 715, 1135, 1334, 1529
BsiHKCI CYCGRG 2 cut(s) 166, 1342
BsiSI CCGG 7 cut(s) 14, 42, 1201, 1212, 1930, 1978, 2320
BsiWI CGTACG 1 cut(s) 257
BslFI GGGAC 1 cut(s) 398
BslI CCNNNNNNNGG 5 cut(s) 1109, 1326, 1377, 1583, 2077
BsmAI GTCTC 3 cut(s) 1087, 1191, 1399
BsmBI CGTCTC 1 cut(s) 1399
BsmFI GGGAC 1 cut(s) 398
BsmI GAATGC 1 cut(s) 1361
BsnI GGCC 8 cut(s) 215, 263, 403, 410, 657, 1370, 2173, 2319
Bso31I GGTCTC 1 cut(s) 1191
BsoBI CYCGRG 2 cut(s) 166, 1342
Bsp119I TTCGAA 2 cut(s) 1397, 2043
Bsp1286I GDGCHC 5 cut(s) 715, 946, 1135, 1334, 1529
Bsp13I TCCGGA 1 cut(s) 1211
Bsp143I GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
Bsp19I CCATGG 1 cut(s) 652
BspANI GGCC 8 cut(s) 215, 263, 403, 410, 657, 1370, 2173, 2319
BspCNI CTCAG 4 cut(s) 667, 1607, 1691, 2266
BspDI ATCGAT 1 cut(s) 2187
BspEI TCCGGA 1 cut(s) 1211
BspHI TCATGA 1 cut(s) 753
BspLI GGNNCC 3 cut(s) 310, 838, 1206
BspPI GGATC 3 cut(s) 214, 467, 1766
BspT104I TTCGAA 2 cut(s) 1397, 2043
BspT107I GGYRCC 2 cut(s) 836, 1204
BspTNI GGTCTC 1 cut(s) 1191
BsrBI CCGCTC 2 cut(s) 24, 1876
BsrDI GCAATG 4 cut(s) 600, 737, 1123, 1870
BsrI ACTGG 8 cut(s) 404, 416, 1174, 1287, 1488, 1751, 2014, 2299
BssECI CCNNGG 8 cut(s) 165, 490, 606, 652, 890, 1371, 1928, 2157
BssMI GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
BssNI GRCGYC 1 cut(s) 1894
BssSI CACGAG 1 cut(s) 1821
BssT1I CCWWGG 3 cut(s) 606, 652, 890
Bst2BI CACGAG 1 cut(s) 1821
Bst2UI CCWGG 3 cut(s) 313, 491, 1372
Bst4CI ACNGT 7 cut(s) 827, 855, 1004, 1410, 1747, 2105, 2158
Bst6I CTCTTC 2 cut(s) 609, 1018
BstACI GRCGYC 1 cut(s) 1894
BstBI TTCGAA 2 cut(s) 1397, 2043
BstC8I GCNNGC 4 cut(s) 1135, 2068, 2143, 2175
BstDEI CTNAG 6 cut(s) 675, 1087, 1594, 1678, 2151, 2274
BstDSI CCRYGG 2 cut(s) 652, 2157
BstENI CCTNNNNNAGG 1 cut(s) 1375
BstF5I GGATG 4 cut(s) 616, 1198, 2332, 2341
BstHHI GCGC 3 cut(s) 1032, 1116, 2301
BstKTI GATC 6 cut(s) 209, 475, 753, 823, 1761, 1909
BstMAI GTCTC 3 cut(s) 1087, 1191, 1399
BstMBI GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
BstMWI GCNNNNNNNGC 9 cut(s) 66, 111, 126, 260, 1253, 1262, 1367, 1568, 2072
BstNI CCWGG 3 cut(s) 313, 491, 1372
BstNSI RCATGY 1 cut(s) 1509
BstSCI CCNGG 6 cut(s) 311, 489, 1200, 1370, 1928, 1976
BstSLI GKGCMC 2 cut(s) 1334, 1529
BstV2I GAAGAC 3 cut(s) 264, 634, 1486
BstXI CCANNNNNNTGG 1 cut(s) 732
Bsu15I ATCGAT 1 cut(s) 2187
Bsu36I CCTNAGG 1 cut(s) 1087
BsuRI GGCC 8 cut(s) 215, 263, 403, 410, 657, 1370, 2173, 2319
BsuTUI ATCGAT 1 cut(s) 2187
BtgI CCRYGG 2 cut(s) 652, 2157
BtrI CACGTC 1 cut(s) 2113
BtsCI GGATG 4 cut(s) 616, 1198, 2332, 2341
BtsI GCAGTG 2 cut(s) 1249, 1561
BtsIMutI CAGTG 8 cut(s) 216, 411, 832, 1249, 1561, 1686, 1752, 2007
Cac8I GCNNGC 4 cut(s) 1135, 2068, 2143, 2175
CaiI CAGNNNCTG 3 cut(s) 117, 440, 1162
CciI TCATGA 1 cut(s) 753
CfoI GCGC 3 cut(s) 1032, 1116, 2301
Cfr13I GGNCC 1 cut(s) 887
ClaI ATCGAT 1 cut(s) 2187
CseI GACGC 1 cut(s) 1883
Csp6I GTAC 9 cut(s) 90, 99, 258, 567, 706, 837, 1205, 1268, 1289
CviAII CATG 7 cut(s) 280, 538, 585, 653, 754, 1506, 1999
CviQI GTAC 9 cut(s) 90, 99, 258, 567, 706, 837, 1205, 1268, 1289
DdeI CTNAG 6 cut(s) 675, 1087, 1594, 1678, 2151, 2274
DpnI GATC 6 cut(s) 208, 474, 752, 822, 1760, 1908
DpnII GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
EaeI YGGCCR 5 cut(s) 213, 401, 408, 655, 2317
Eam1104I CTCTTC 2 cut(s) 609, 1018
EarI CTCTTC 2 cut(s) 609, 1018
Eco130I CCWWGG 3 cut(s) 606, 652, 890
Eco24I GRGCYC 1 cut(s) 946
Eco31I GGTCTC 1 cut(s) 1191
Eco47I GGWCC 1 cut(s) 887
Eco57I CTGAAG 4 cut(s) 417, 1233, 1429, 2285
Eco81I CCTNAGG 1 cut(s) 1087
Eco88I CYCGRG 2 cut(s) 166, 1342
EcoNI CCTNNNNNAGG 1 cut(s) 1375
EcoRI GAATTC 1 cut(s) 526
EcoRII CCWGG 3 cut(s) 311, 489, 1370
EcoT14I CCWWGG 3 cut(s) 606, 652, 890
EcoT22I ATGCAT 1 cut(s) 1363
EcoT38I GRGCYC 1 cut(s) 946
ErhI CCWWGG 3 cut(s) 606, 652, 890
Esp3I CGTCTC 1 cut(s) 1399
FaeI CATG 7 cut(s) 283, 541, 588, 656, 757, 1509, 2002
FalI AAGNNNNNCTT 2 cut(s) 681, 713
FaqI GGGAC 1 cut(s) 398
FatI CATG 7 cut(s) 279, 537, 584, 652, 753, 1505, 1998
FauI CCCGC 3 cut(s) 10, 1869, 2075
FauNDI CATATG 2 cut(s) 637, 1015
FbaI TGATCA 1 cut(s) 750
FokI GGATG 3 cut(s) 623, 1205, 2339
FriOI GRGCYC 1 cut(s) 946
FspAI RTGCGCAY 1 cut(s) 1031
FspBI CTAG 2 cut(s) 1668, 2076
FspI TGCGCA 1 cut(s) 1031
GlaI GCGC 3 cut(s) 1031, 1115, 2300
GsuI CTGGAG 1 cut(s) 1853
HaeIII GGCC 8 cut(s) 215, 263, 403, 410, 657, 1370, 2173, 2319
HapII CCGG 7 cut(s) 14, 42, 1201, 1212, 1930, 1978, 2320
HgaI GACGC 1 cut(s) 1883
HhaI GCGC 3 cut(s) 1032, 1116, 2301
Hin1I GRCGYC 1 cut(s) 1894
Hin1II CATG 7 cut(s) 283, 541, 588, 656, 757, 1509, 2002
Hin6I GCGC 3 cut(s) 1030, 1114, 2299
HinP1I GCGC 3 cut(s) 1030, 1114, 2299
HincII GTYRAC 1 cut(s) 1898
HindII GTYRAC 1 cut(s) 1898
HindIII AAGCTT 1 cut(s) 1569
HpaII CCGG 7 cut(s) 14, 42, 1201, 1212, 1930, 1978, 2320
HphI GGTGA 7 cut(s) 347, 526, 870, 1184, 1594, 1976, 2069
Hpy166II GTNNAC 6 cut(s) 1332, 1527, 1602, 1898, 2089, 2236
Hpy188I TCNGA 9 cut(s) 206, 442, 820, 1227, 1448, 1455, 1597, 1763, 2275
Hpy8I GTNNAC 6 cut(s) 1332, 1527, 1602, 1898, 2089, 2236
HpyAV CCTTC 5 cut(s) 299, 787, 1045, 1218, 2317
HpyCH4III ACNGT 7 cut(s) 827, 855, 1004, 1410, 1747, 2105, 2158
HpyCH4IV ACGT 4 cut(s) 123, 225, 2112, 2192
HpyF10VI GCNNNNNNNGC 9 cut(s) 66, 111, 126, 260, 1253, 1262, 1367, 1568, 2072
HpyF3I CTNAG 6 cut(s) 675, 1087, 1594, 1678, 2151, 2274
HpySE526I ACGT 4 cut(s) 123, 225, 2112, 2192
Hsp92I GRCGYC 1 cut(s) 1894
Hsp92II CATG 7 cut(s) 283, 541, 588, 656, 757, 1509, 2002
HspAI GCGC 3 cut(s) 1030, 1114, 2299
Kpn2I TCCGGA 1 cut(s) 1211
KpnI GGTACC 2 cut(s) 840, 1208
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
LmnI GCTCC 6 cut(s) 21, 578, 797, 1298, 1834, 2250
LweI GCATC 5 cut(s) 433, 631, 660, 1348, 1615
MaeI CTAG 2 cut(s) 1668, 2076
MaeII ACGT 4 cut(s) 123, 225, 2112, 2192
MaeIII GTNAC 5 cut(s) 335, 421, 1380, 1586, 1991
MalI GATC 6 cut(s) 208, 474, 752, 822, 1760, 1908
MbiI CCGCTC 2 cut(s) 24, 1876
MboI GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
MfeI CAATTG 2 cut(s) 593, 1324
MhlI GDGCHC 5 cut(s) 715, 946, 1135, 1334, 1529
MlsI TGGCCA 4 cut(s) 215, 403, 410, 657
MluNI TGGCCA 4 cut(s) 215, 403, 410, 657
MlyI GAGTC 6 cut(s) 19, 332, 730, 1521, 1733, 1975
MmeI TCCRAC 2 cut(s) 837, 1433
Mox20I TGGCCA 4 cut(s) 215, 403, 410, 657
Mph1103I ATGCAT 1 cut(s) 1363
MroI TCCGGA 1 cut(s) 1211
MscI TGGCCA 4 cut(s) 215, 403, 410, 657
MseI TTAA 7 cut(s) 158, 1094, 1458, 1536, 1610, 1656, 1785
MslI CAYNNNNRTG 3 cut(s) 1149, 1697, 1853
Msp20I TGGCCA 4 cut(s) 215, 403, 410, 657
MspA1I CMGCKG 2 cut(s) 114, 1162
MspI CCGG 7 cut(s) 14, 42, 1201, 1212, 1930, 1978, 2320
MspR9I CCNGG 6 cut(s) 313, 491, 1202, 1372, 1930, 1978
MunI CAATTG 2 cut(s) 593, 1324
Mva1269I GAATGC 1 cut(s) 1361
MvaI CCWGG 3 cut(s) 313, 491, 1372
MwoI GCNNNNNNNGC 9 cut(s) 66, 111, 126, 260, 1253, 1262, 1367, 1568, 2072
NciI CCSGG 3 cut(s) 1202, 1930, 1978
NcoI CCATGG 1 cut(s) 652
NdeI CATATG 2 cut(s) 637, 1015
NdeII GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
NlaIII CATG 7 cut(s) 283, 541, 588, 656, 757, 1509, 2002
NlaIV GGNNCC 3 cut(s) 310, 838, 1206
NmuCI GTSAC 4 cut(s) 335, 421, 1380, 1586
NsbI TGCGCA 1 cut(s) 1031
NsiI ATGCAT 1 cut(s) 1363
NspI RCATGY 1 cut(s) 1509
NspV TTCGAA 2 cut(s) 1397, 2043
PagI TCATGA 1 cut(s) 753
PcsI WCGNNNNNNNCGW 2 cut(s) 266, 706
PctI GAATGC 1 cut(s) 1361
PfeI GAWTC 6 cut(s) 773, 979, 1217, 1805, 1881, 2002
Pfl23II CGTACG 1 cut(s) 257
PleI GAGTC 6 cut(s) 18, 332, 730, 1520, 1733, 1975
PpsI GAGTC 6 cut(s) 18, 332, 730, 1520, 1733, 1975
PsiI TTATAA 1 cut(s) 792
Psp6I CCWGG 3 cut(s) 311, 489, 1370
PspGI CCWGG 3 cut(s) 311, 489, 1370
PspLI CGTACG 1 cut(s) 257
PspN4I GGNNCC 3 cut(s) 310, 838, 1206
PspPI GGNCC 1 cut(s) 887
PstNI CAGNNNCTG 3 cut(s) 117, 440, 1162
PvuII CAGCTG 2 cut(s) 114, 1162
RsaI GTAC 9 cut(s) 91, 100, 259, 568, 707, 838, 1206, 1269, 1290
RsaNI GTAC 9 cut(s) 90, 99, 258, 567, 706, 837, 1205, 1268, 1289
RseI CAYNNNNRTG 3 cut(s) 1149, 1697, 1853
SaqAI TTAA 7 cut(s) 158, 1094, 1458, 1536, 1610, 1656, 1785
Sau3AI GATC 6 cut(s) 206, 472, 750, 820, 1758, 1906
Sau96I GGNCC 1 cut(s) 887
ScaI AGTACT 1 cut(s) 1290
SchI GAGTC 6 cut(s) 19, 332, 730, 1521, 1733, 1975
ScrFI CCNGG 6 cut(s) 313, 491, 1202, 1372, 1930, 1978
SduI GDGCHC 5 cut(s) 715, 946, 1135, 1334, 1529
SfaNI GCATC 5 cut(s) 433, 631, 660, 1348, 1615
SfuI TTCGAA 2 cut(s) 1397, 2043
SinI GGWCC 1 cut(s) 887
SmiMI CAYNNNNRTG 3 cut(s) 1149, 1697, 1853
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SspMI CTAG 2 cut(s) 1668, 2076
StyD4I CCNGG 6 cut(s) 311, 489, 1200, 1370, 1928, 1976
StyI CCWWGG 3 cut(s) 606, 652, 890
TaaI ACNGT 7 cut(s) 827, 855, 1004, 1410, 1747, 2105, 2158
TaiI ACGT 4 cut(s) 126, 228, 2115, 2195
TaqI TCGA 5 cut(s) 8, 946, 1397, 2043, 2187
TatI WGTACW 2 cut(s) 1267, 1288
TauI GCSGC 3 cut(s) 72, 398, 1422
TfiI GAWTC 6 cut(s) 773, 979, 1217, 1805, 1881, 2002
Tru1I TTAA 7 cut(s) 158, 1094, 1458, 1536, 1610, 1656, 1785
Tru9I TTAA 7 cut(s) 158, 1094, 1458, 1536, 1610, 1656, 1785
TscAI CASTG 8 cut(s) 216, 411, 832, 1249, 1561, 1686, 1752, 2014
TseFI GTSAC 4 cut(s) 335, 421, 1380, 1586
Tsp45I GTSAC 4 cut(s) 335, 421, 1380, 1586
TspDTI ATGAA 9 cut(s) 318, 386, 531, 627, 701, 769, 770, 1428, 2135
TspRI CASTG 8 cut(s) 216, 411, 832, 1249, 1561, 1686, 1752, 2014
VneI GTGCAC 2 cut(s) 1330, 1525
VpaK11BI GGWCC 1 cut(s) 887
XagI CCTNNNNNAGG 1 cut(s) 1375
XapI RAATTY 5 cut(s) 526, 660, 1639, 1970, 2309
XbaI TCTAGA 1 cut(s) 1667
XceI RCATGY 1 cut(s) 1509
XspI CTAG 2 cut(s) 1668, 2076
ZrmI AGTACT 1 cut(s) 1290
Zsp2I ATGCAT 1 cut(s) 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.