Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

7276507 .. 7282238

Gene Structure 5732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1076200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGGTTCAAGTCCGGCCTCCGGCAGCGGCGACGGCGGTAGCGGTGGTGCTGTGGGTGGTGGTTGTGCGAATGGTGCGAGTAATAGCGGCGGCAGCTGCTGCAACATGAGCGTGAAGTGCAGGTGCCGGATGTCGTCGGGGTTGGTGTTCTTCTTGGGGTGCTTTGTGTTGTTCGGATCAGTCGCCACGGTTTACGTCTGGTTCGCCTTCACGCCTTTTTATGCTCGGACGGCGTTGGCCTCTCCCTCCATGCTTGGGTGTCAGGAGGACAATGAAGGTTCATGGTCTGTTGGTGTTTTCTTCGGTGACTCTCCTTTTTCCCTCAAGCCCATTGAAGCTATGAATGTATGGAGGGACAATACTGCAGCTTGGCCTGTGGCGAACCCGGTTGTGACTTGTTCTTCAGTTTCTGATGCTGGTTTCCCAAGTAATTTTGTTGCCGATCCTTTCCTTTATGTCCAGGGAGATATTTTTTACTTGTTCTATGAAACCAAAAATTCAATCACTTTGCAAGGAGATATTGGAGTCTCAAAAAGTATTGATAAGGGAGCAACATGGCAGCAATTGGGCATTGCCTTGGACGAAGAGTGGCATCTCTCTTACCCGTATGTCTTCAACTACCTTGGCCAAATATATATGATGCCTGAGGGTGGTATGAAAGGGGATGTTCGTCTATACCGAGCACTCAATTTTCCTTTGCAATGGACTCTGGAGAGAGTGATCATGAAAAAGCCTCTTGTTGATTCTTTCATAATCGATTATAATGGAGCGTATTGGTTGTTTGGTTCAGATCACACTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTATAGCAGCTCCCCTCTTGGTCCTTGGAAACCACACAAGAAGAACCCTATATATAATAGGGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTCTACAAAGGAAATCTTTATCGTGTTGGTCAAGACTGCGGTGAAACATATGGGAGAAGAGTGCGTACCTTTAAGGTGGAAGTTCTTACCAAAGATGATTACAAAGAAGTTGAAGTTCCCTTGGGCTTGATAGAGCCAAGTAAGGGCCGTAATGCTTGGAACGGTGCTCGCTATCATCATCTAGACGTGCAGCAAATAAATACTGGTGAGTGGGTTGGAGTGATGGATGGAGACCGGGTACCATCTGGGGATTCAGTTCGGAGGTTTATTCTTGGCAGTGCTTCAGTTGCCGTTGTTGCTGTACTCATTATATTGATGGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCTCTCAATTGGTGCACTCACTACTCAGGTAAGCGGAGTGATGCGTTCTTGGCCTGGGAAAGGTCACATTTGTTTTCTTCCAAAGTGAGACGGTTTTGCAGCCACTTGAACAGAGGAGTTTCATTCCTCAGAGGTAGGATTAAACCTAATACCTGTGCTGGAAGACTGGTTCTTGCTATAATTTTGGCGTTTGGAGTTGCAGCTATGTGCACAGGGGTTAAATATATCTATGGTGGTAGCGGTGCAGAAGAAGCTTATCCATGGAAAGGTCATTACTCGCAGTTCACCTTATTAACAATGACCTATGACGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACATTATTCCAGATGTTCCTCAGTGCGAGAAATTGTTGTGGTGTGGAACAAAGGAATACCACCTGAAGTTAGCGACTTTGACTCCACAGTGCCGGTTAGGATCAGAGTAGAGAAACAAAACTCACTGAATAATCGGTTCAAGTTGGATTCTTTGATAAAGACCCGAGCAGTTCTTGAGCTTGATGACGACATTATGATGACTTGCAATGATGTTGAGAGGGGATTCAGGATATGGCGCCAACACCCAGATCGTATTGTGGGGTTCTACCCCCGACTAATTGACGGAAGCCGATTGAAGTATCGAGGTGAGAAATATGCCCGGACCCATAAAGGATATAACATGATTCTCACGGGGGCAGCTTTCCTTGATAGTCAAGTAGCTTTCGAGAGGTATTGGGGAAAAGAAGCTAGCCAAGCGAGGGAATTGGTGGACAAGTATTTCAACTGCGAGGACGTACTGATGAATTACTTGTATGCAAATGCTAGCAAATCCAAGAATGTGGAGTATGTGAGGCCAGCGTGGGCAATAGATACATCAAAGTTATCTGGTGCTGCAATAAGCCGAAATACAAAAGTTCACTACCATATAAGGAGCAACTGCCTCCTGAAATTTTCTGAGATGTATGGAAGTTTGGCCGGGCGCAAGTGGGAGTTTGATGAGCGGAAGGATGGTTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

771

Amino Acids

86.45

Weight (kDa)

9.06

Isoelectric Point (pI)

37.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	87 - 390	8.2e-179	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	524 - 762	6.7e-64	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	762
AarI	CACCTGC	1 cut(s)	111
Acc36I	ACCTGC	1 cut(s)	111
Acc65I	GGTACC	1 cut(s)	1174
AccB1I	GGYRCC	4 cut(s)	123, 806, 1174, 1863
AccBSI	CCGCTC	1 cut(s)	2290
AciI	CCGC	9 cut(s)	27, 36, 42, 87, 90, 975, 1321, 1527, 2290
AclWI	GGATC	3 cut(s)	184, 437, 1736
AcoI	YGGCCR	2 cut(s)	625, 2262
AcsI	RAATTY	3 cut(s)	496, 1609, 2237
AcuI	CTGAAG	3 cut(s)	387, 1203, 1713
AcyI	GRCGYC	1 cut(s)	1864
AfaI	GTAC	5 cut(s)	1003, 1176, 1239, 1260, 2085
AfiI	CCNNNNNNNGG	7 cut(s)	20, 255, 650, 1079, 1347, 1553, 2047
AjiI	CACGTC	1 cut(s)	1123
AjnI	CCWGG	2 cut(s)	459, 1340
AjuI	GAANNNNNNNTTGG	2 cut(s)	809, 841
AloI	GAACNNNNNNTCC	2 cut(s)	1440, 1472
Alw21I	GWGCWC	4 cut(s)	685, 1105, 1304, 1499
Alw26I	GTCTC	4 cut(s)	532, 1161, 1369, 1607
Alw44I	GTGCAC	2 cut(s)	1300, 1495
AlwI	GGATC	3 cut(s)	184, 437, 1736
AlwNI	CAGNNNCTG	2 cut(s)	99, 410
Ama87I	CYCGRG	1 cut(s)	1791
AoxI	GGCC	8 cut(s)	15, 237, 371, 625, 1081, 1338, 2141, 2262
ApaLI	GTGCAC	2 cut(s)	1300, 1495
ApoI	RAATTY	3 cut(s)	496, 1609, 2237
ArsI	GACNNNNNNTTYG	2 cut(s)	890, 922
Asp718I	GGTACC	1 cut(s)	1174
AspLEI	GCGC	2 cut(s)	1866, 2271
AspS9I	GGNCC	3 cut(s)	857, 1081, 1950
AsuC2I	CCSGG	4 cut(s)	386, 1172, 1948, 2266
AsuHPI	GGTGA	5 cut(s)	317, 989, 1154, 1564, 1946
AsuNHI	GCTAGC	2 cut(s)	2036, 2111
AvaI	CYCGRG	1 cut(s)	1791
AvaII	GGWCC	2 cut(s)	857, 1950
AxyI	CCTNAGG	1 cut(s)	645
BaeGI	GKGCMC	2 cut(s)	1304, 1499
BalI	TGGCCA	1 cut(s)	627
BanI	GGYRCC	4 cut(s)	123, 806, 1174, 1863
BanII	GRGCYC	1 cut(s)	916
BarI	GAAGNNNNNNTAC	2 cut(s)	985, 1017
BbsI	GAAGAC	2 cut(s)	604, 1456
Bbv12I	GWGCWC	4 cut(s)	685, 1105, 1304, 1499
BccI	CCATC	5 cut(s)	1153, 1157, 1186, 1246, 2291
BceAI	ACGGC	4 cut(s)	49, 246, 1068, 1211
BciT130I	CCWGG	2 cut(s)	461, 1342
BclI	TGATCA	1 cut(s)	720
BcnI	CCSGG	4 cut(s)	386, 1172, 1948, 2266
BcoDI	GTCTC	4 cut(s)	532, 1161, 1369, 1607
BfaI	CTAG	3 cut(s)	1118, 2037, 2112
BfmI	CTRYAG	1 cut(s)	363
BfoI	RGCGCY	1 cut(s)	1867
BfuAI	ACCTGC	1 cut(s)	111
Bme1390I	CCNGG	6 cut(s)	386, 461, 1172, 1342, 1948, 2266
Bme18I	GGWCC	2 cut(s)	857, 1950
BmeT110I	CYCGRG	1 cut(s)	1791
BmgBI	CACGTC	1 cut(s)	1123
BmgT120I	GGNCC	3 cut(s)	857, 1081, 1950
BmiI	GGNNCC	5 cut(s)	125, 808, 1176, 1865, 1952
BmrFI	CCNGG	6 cut(s)	386, 461, 1172, 1342, 1948, 2266
BmsI	GCATC	4 cut(s)	403, 601, 630, 1318
BmtI	GCTAGC	2 cut(s)	2040, 2115
BoxI	GACNNNNGTC	1 cut(s)	1599
BpiI	GAAGAC	2 cut(s)	604, 1456
BpmI	CTGGAG	1 cut(s)	731
BpuEI	CTTGAG	2 cut(s)	308, 1823
BpuMI	CCSGG	4 cut(s)	386, 1172, 1948, 2266
Bsa29I	ATCGAT	1 cut(s)	756
BsaHI	GRCGYC	1 cut(s)	1864
BsaI	GGTCTC	1 cut(s)	1161
BsaJI	CCNNGG	8 cut(s)	186, 460, 576, 622, 860, 1056, 1341, 1547
BsaXI	ACNNNNNCTCC	4 cut(s)	1158, 1188, 1694, 1724
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 255, 650, 1079, 1347, 1553, 2047
Bse118I	RCCGGY	1 cut(s)	1720
Bse1I	ACTGG	3 cut(s)	802, 1144, 1458
Bse21I	CCTNAGG	1 cut(s)	645
Bse3DI	GCAATG	3 cut(s)	570, 707, 1840
BseBI	CCWGG	2 cut(s)	461, 1342
BseCI	ATCGAT	1 cut(s)	756
BseDI	CCNNGG	8 cut(s)	186, 460, 576, 622, 860, 1056, 1341, 1547
BseGI	GGATG	5 cut(s)	135, 670, 1168, 2302, 2311
BseLI	CCNNNNNNNGG	7 cut(s)	20, 255, 650, 1079, 1347, 1553, 2047
BseMI	GCAATG	3 cut(s)	570, 707, 1840
BseMII	CTCAG	5 cut(s)	636, 1326, 1429, 1662, 2235
BseNI	ACTGG	3 cut(s)	802, 1144, 1458
BseRI	GAGGAG	1 cut(s)	1416
BseSI	GKGCMC	2 cut(s)	1304, 1499
BsgI	GTGCAG	3 cut(s)	139, 1145, 1551
BshFI	GGCC	8 cut(s)	17, 239, 373, 627, 1083, 1340, 2143, 2264
BshNI	GGYRCC	4 cut(s)	123, 806, 1174, 1863
BshVI	ATCGAT	1 cut(s)	756
BsiHKAI	GWGCWC	4 cut(s)	685, 1105, 1304, 1499
BsiHKCI	CYCGRG	1 cut(s)	1791
BsiSI	CCGG	8 cut(s)	14, 21, 127, 386, 1171, 1721, 1948, 2265
BslFI	GGGAC	2 cut(s)	368, 911
BslI	CCNNNNNNNGG	7 cut(s)	20, 255, 650, 1079, 1347, 1553, 2047
BsmAI	GTCTC	4 cut(s)	532, 1161, 1369, 1607
BsmBI	CGTCTC	2 cut(s)	1369, 1607
BsmFI	GGGAC	2 cut(s)	368, 911
BsnI	GGCC	8 cut(s)	17, 239, 373, 627, 1083, 1340, 2143, 2264
Bso31I	GGTCTC	1 cut(s)	1161
BsoBI	CYCGRG	1 cut(s)	1791
Bsp1286I	GDGCHC	5 cut(s)	685, 916, 1105, 1304, 1499
Bsp143I	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
Bsp19I	CCATGG	1 cut(s)	1547
BspACI	CCGC	9 cut(s)	27, 36, 42, 87, 90, 975, 1321, 1527, 2290
BspANI	GGCC	8 cut(s)	17, 239, 373, 627, 1083, 1340, 2143, 2264
BspCNI	CTCAG	5 cut(s)	637, 1325, 1428, 1661, 2236
BspDI	ATCGAT	1 cut(s)	756
BspHI	TCATGA	1 cut(s)	723
BspLI	GGNNCC	5 cut(s)	125, 808, 1176, 1865, 1952
BspMAI	CTGCAG	1 cut(s)	367
BspMI	ACCTGC	1 cut(s)	111
BspOI	GCTAGC	2 cut(s)	2040, 2115
BspPI	GGATC	3 cut(s)	184, 437, 1736
BspT107I	GGYRCC	4 cut(s)	123, 806, 1174, 1863
BspTNI	GGTCTC	1 cut(s)	1161
BsrBI	CCGCTC	1 cut(s)	2290
BsrDI	GCAATG	3 cut(s)	570, 707, 1840
BsrFI	RCCGGY	1 cut(s)	1720
BsrI	ACTGG	3 cut(s)	802, 1144, 1458
BssAI	RCCGGY	1 cut(s)	1720
BssECI	CCNNGG	8 cut(s)	186, 460, 576, 622, 860, 1056, 1341, 1547
BssMI	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
BssNI	GRCGYC	1 cut(s)	1864
BssT1I	CCWWGG	5 cut(s)	576, 622, 860, 1056, 1547
Bst2UI	CCWGG	2 cut(s)	461, 1342
Bst4CI	ACNGT	5 cut(s)	190, 825, 1100, 1380, 1717
Bst6I	CTCTTC	2 cut(s)	579, 988
BstACI	GRCGYC	1 cut(s)	1864
BstAPI	GCANNNNNTGC	1 cut(s)	99
BstC8I	GCNNGC	4 cut(s)	1105, 2038, 2113, 2145
BstDEI	CTNAG	5 cut(s)	645, 1312, 1415, 1648, 2244
BstDSI	CCRYGG	2 cut(s)	186, 1547
BstENI	CCTNNNNNAGG	1 cut(s)	1345
BstF5I	GGATG	5 cut(s)	135, 670, 1168, 2302, 2311
BstH2I	RGCGCY	1 cut(s)	1867
BstHHI	GCGC	2 cut(s)	1866, 2271
BstKTI	GATC	6 cut(s)	179, 445, 723, 793, 1731, 1879
BstMAI	GTCTC	4 cut(s)	532, 1161, 1369, 1607
BstMBI	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
BstNI	CCWGG	2 cut(s)	461, 1342
BstPAI	GACNNNNGTC	1 cut(s)	1599
BstSCI	CCNGG	6 cut(s)	384, 459, 1170, 1340, 1946, 2264
BstSFI	CTRYAG	1 cut(s)	363
BstSLI	GKGCMC	2 cut(s)	1304, 1499
BstV2I	GAAGAC	2 cut(s)	604, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	2128
Bsu15I	ATCGAT	1 cut(s)	756
Bsu36I	CCTNAGG	1 cut(s)	645
BsuRI	GGCC	8 cut(s)	17, 239, 373, 627, 1083, 1340, 2143, 2264
BsuTUI	ATCGAT	1 cut(s)	756
BtgI	CCRYGG	2 cut(s)	186, 1547
BtrI	CACGTC	1 cut(s)	1123
BtsCI	GGATG	5 cut(s)	135, 670, 1168, 2302, 2311
BtsI	GCAGTG	1 cut(s)	1219
BtsIMutI	CAGTG	5 cut(s)	795, 1219, 1656, 1722, 1751
BveI	ACCTGC	1 cut(s)	111
Cac8I	GCNNGC	4 cut(s)	1105, 2038, 2113, 2145
CaiI	CAGNNNCTG	2 cut(s)	99, 410
CciI	TCATGA	1 cut(s)	723
CfoI	GCGC	2 cut(s)	1866, 2271
Cfr10I	RCCGGY	1 cut(s)	1720
Cfr13I	GGNCC	3 cut(s)	857, 1081, 1950
ClaI	ATCGAT	1 cut(s)	756
CseI	GACGC	1 cut(s)	1604
Csp6I	GTAC	5 cut(s)	1002, 1175, 1238, 1259, 2084
CviAII	CATG	8 cut(s)	106, 250, 282, 555, 724, 1282, 1548, 1969
CviQI	GTAC	5 cut(s)	1002, 1175, 1238, 1259, 2084
DdeI	CTNAG	5 cut(s)	645, 1312, 1415, 1648, 2244
DinI	GGCGCC	1 cut(s)	1865
DpnI	GATC	6 cut(s)	178, 444, 722, 792, 1730, 1878
DpnII	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
EaeI	YGGCCR	2 cut(s)	625, 2262
Eam1104I	CTCTTC	2 cut(s)	579, 988
EarI	CTCTTC	2 cut(s)	579, 988
Eco130I	CCWWGG	5 cut(s)	576, 622, 860, 1056, 1547
Eco24I	GRGCYC	1 cut(s)	916
Eco31I	GGTCTC	1 cut(s)	1161
Eco47I	GGWCC	2 cut(s)	857, 1950
Eco57I	CTGAAG	3 cut(s)	387, 1203, 1713
Eco81I	CCTNAGG	1 cut(s)	645
Eco88I	CYCGRG	1 cut(s)	1791
EcoNI	CCTNNNNNAGG	1 cut(s)	1345
EcoRII	CCWGG	2 cut(s)	459, 1340
EcoT14I	CCWWGG	5 cut(s)	576, 622, 860, 1056, 1547
EcoT38I	GRGCYC	1 cut(s)	916
EgeI	GGCGCC	1 cut(s)	1865
EheI	GGCGCC	1 cut(s)	1865
ErhI	CCWWGG	5 cut(s)	576, 622, 860, 1056, 1547
Esp3I	CGTCTC	2 cut(s)	1369, 1607
FaeI	CATG	8 cut(s)	109, 253, 285, 558, 727, 1285, 1551, 1972
FalI	AAGNNNNNCTT	2 cut(s)	936, 968
FaqI	GGGAC	2 cut(s)	368, 911
FatI	CATG	8 cut(s)	105, 249, 281, 554, 723, 1281, 1547, 1968
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	1 cut(s)	720
FokI	GGATG	4 cut(s)	142, 677, 1175, 2309
FriOI	GRGCYC	1 cut(s)	916
FspBI	CTAG	3 cut(s)	1118, 2037, 2112
GlaI	GCGC	2 cut(s)	1865, 2270
GsuI	CTGGAG	1 cut(s)	731
HaeII	RGCGCY	1 cut(s)	1867
HaeIII	GGCC	8 cut(s)	17, 239, 373, 627, 1083, 1340, 2143, 2264
HapII	CCGG	8 cut(s)	14, 21, 127, 386, 1171, 1721, 1948, 2265
HgaI	GACGC	1 cut(s)	1604
HhaI	GCGC	2 cut(s)	1866, 2271
Hin1I	GRCGYC	1 cut(s)	1864
Hin1II	CATG	8 cut(s)	109, 253, 285, 558, 727, 1285, 1551, 1972
Hin6I	GCGC	2 cut(s)	1864, 2269
HinP1I	GCGC	2 cut(s)	1864, 2269
HindIII	AAGCTT	1 cut(s)	1539
HpaII	CCGG	8 cut(s)	14, 21, 127, 386, 1171, 1721, 1948, 2265
HphI	GGTGA	5 cut(s)	317, 989, 1154, 1564, 1946
Hpy166II	GTNNAC	7 cut(s)	193, 1259, 1302, 1497, 1572, 2059, 2206
Hpy188I	TCNGA	8 cut(s)	176, 228, 412, 790, 1197, 1418, 1733, 2245
Hpy8I	GTNNAC	7 cut(s)	193, 1259, 1302, 1497, 1572, 2059, 2206
Hpy99I	CGWCG	2 cut(s)	35, 139
HpyAV	CCTTC	3 cut(s)	217, 269, 2287
HpyCH4III	ACNGT	5 cut(s)	190, 825, 1100, 1380, 1717
HpyCH4IV	ACGT	3 cut(s)	195, 1122, 2082
HpyF3I	CTNAG	5 cut(s)	645, 1312, 1415, 1648, 2244
HpySE526I	ACGT	3 cut(s)	195, 1122, 2082
Hsp92I	GRCGYC	1 cut(s)	1864
Hsp92II	CATG	8 cut(s)	109, 253, 285, 558, 727, 1285, 1551, 1972
HspAI	GCGC	2 cut(s)	1864, 2269
KasI	GGCGCC	1 cut(s)	1863
KpnI	GGTACC	1 cut(s)	1178
Ksp22I	TGATCA	1 cut(s)	720
Kzo9I	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
LmnI	GCTCC	5 cut(s)	548, 767, 851, 1268, 2220
LweI	GCATC	4 cut(s)	403, 601, 630, 1318
MaeI	CTAG	3 cut(s)	1118, 2037, 2112
MaeII	ACGT	3 cut(s)	195, 1122, 2082
MaeIII	GTNAC	3 cut(s)	305, 391, 1350
MalI	GATC	6 cut(s)	178, 444, 722, 792, 1730, 1878
MbiI	CCGCTC	1 cut(s)	2290
MboI	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
MfeI	CAATTG	2 cut(s)	563, 1294
MhlI	GDGCHC	5 cut(s)	685, 916, 1105, 1304, 1499
MlsI	TGGCCA	1 cut(s)	627
MluNI	TGGCCA	1 cut(s)	627
Mly113I	GGCGCC	1 cut(s)	1864
MlyI	GAGTC	4 cut(s)	302, 534, 700, 1703
MmeI	TCCRAC	3 cut(s)	807, 1132, 1752
Mox20I	TGGCCA	1 cut(s)	627
MscI	TGGCCA	1 cut(s)	627
MseI	TTAA	5 cut(s)	1008, 1428, 1506, 1580, 1626
MslI	CAYNNNNRTG	2 cut(s)	110, 1823
Msp20I	TGGCCA	1 cut(s)	627
MspA1I	CMGCKG	2 cut(s)	27, 96
MspI	CCGG	8 cut(s)	14, 21, 127, 386, 1171, 1721, 1948, 2265
MspR9I	CCNGG	6 cut(s)	386, 461, 1172, 1342, 1948, 2266
MunI	CAATTG	2 cut(s)	563, 1294
MvaI	CCWGG	2 cut(s)	461, 1342
NarI	GGCGCC	1 cut(s)	1864
NciI	CCSGG	4 cut(s)	386, 1172, 1948, 2266
NcoI	CCATGG	1 cut(s)	1547
NdeI	CATATG	1 cut(s)	985
NdeII	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
NheI	GCTAGC	2 cut(s)	2036, 2111
NlaIII	CATG	8 cut(s)	109, 253, 285, 558, 727, 1285, 1551, 1972
NlaIV	GGNNCC	5 cut(s)	125, 808, 1176, 1865, 1952
NmuCI	GTSAC	3 cut(s)	305, 391, 1350
PagI	TCATGA	1 cut(s)	723
PaqCI	CACCTGC	1 cut(s)	111
PcsI	WCGNNNNNNNCGW	1 cut(s)	676
PfeI	GAWTC	6 cut(s)	743, 1187, 1285, 1775, 1851, 1972
PleI	GAGTC	4 cut(s)	302, 533, 700, 1703
PluTI	GGCGCC	1 cut(s)	1867
PpsI	GAGTC	4 cut(s)	302, 533, 700, 1703
PshAI	GACNNNNGTC	1 cut(s)	1599
PsiI	TTATAA	1 cut(s)	762
Psp6I	CCWGG	2 cut(s)	459, 1340
PspGI	CCWGG	2 cut(s)	459, 1340
PspN4I	GGNNCC	5 cut(s)	125, 808, 1176, 1865, 1952
PspPI	GGNCC	3 cut(s)	857, 1081, 1950
PstI	CTGCAG	1 cut(s)	367
PstNI	CAGNNNCTG	2 cut(s)	99, 410
PvuII	CAGCTG	1 cut(s)	96
RsaI	GTAC	5 cut(s)	1003, 1176, 1239, 1260, 2085
RsaNI	GTAC	5 cut(s)	1002, 1175, 1238, 1259, 2084
RseI	CAYNNNNRTG	2 cut(s)	110, 1823
SaqAI	TTAA	5 cut(s)	1008, 1428, 1506, 1580, 1626
Sau3AI	GATC	6 cut(s)	176, 442, 720, 790, 1728, 1876
Sau96I	GGNCC	3 cut(s)	857, 1081, 1950
SchI	GAGTC	4 cut(s)	302, 534, 700, 1703
ScrFI	CCNGG	6 cut(s)	386, 461, 1172, 1342, 1948, 2266
SduI	GDGCHC	5 cut(s)	685, 916, 1105, 1304, 1499
SfaNI	GCATC	4 cut(s)	403, 601, 630, 1318
SfcI	CTRYAG	1 cut(s)	363
SfoI	GGCGCC	1 cut(s)	1865
SinI	GGWCC	2 cut(s)	857, 1950
SmiMI	CAYNNNNRTG	2 cut(s)	110, 1823
SmlI	CTYRAG	2 cut(s)	323, 1802
SmoI	CTYRAG	2 cut(s)	323, 1802
SsiI	CCGC	9 cut(s)	27, 36, 42, 87, 90, 975, 1321, 1527, 2290
SspDI	GGCGCC	1 cut(s)	1863
SspMI	CTAG	3 cut(s)	1118, 2037, 2112
StyD4I	CCNGG	6 cut(s)	384, 459, 1170, 1340, 1946, 2264
StyI	CCWWGG	5 cut(s)	576, 622, 860, 1056, 1547
TaaI	ACNGT	5 cut(s)	190, 825, 1100, 1380, 1717
TaiI	ACGT	3 cut(s)	198, 1125, 2085
TaqI	TCGA	4 cut(s)	756, 916, 1930, 2013
TatI	WGTACW	2 cut(s)	1237, 1258
TauI	GCSGC	3 cut(s)	30, 90, 93
TfiI	GAWTC	6 cut(s)	743, 1187, 1285, 1775, 1851, 1972
Tru1I	TTAA	5 cut(s)	1008, 1428, 1506, 1580, 1626
Tru9I	TTAA	5 cut(s)	1008, 1428, 1506, 1580, 1626
TscAI	CASTG	5 cut(s)	802, 1219, 1656, 1722, 1758
TseFI	GTSAC	3 cut(s)	305, 391, 1350
Tsp45I	GTSAC	3 cut(s)	305, 391, 1350
TspDTI	ATGAA	9 cut(s)	270, 288, 356, 501, 671, 739, 740, 1398, 2105
TspGWI	ACGGA	1 cut(s)	1926
TspRI	CASTG	5 cut(s)	802, 1219, 1656, 1722, 1758
VneI	GTGCAC	2 cut(s)	1300, 1495
VpaK11BI	GGWCC	2 cut(s)	857, 1950
XagI	CCTNNNNNAGG	1 cut(s)	1345
XapI	RAATTY	3 cut(s)	496, 1609, 2237
XbaI	TCTAGA	1 cut(s)	1117
XspI	CTAG	3 cut(s)	1118, 2037, 2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.