Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

32649566 .. 32655990

Gene Structure 6425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG157400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGCTAATGCATAACCTCATCCTTTACTATCTCTTACAGATATATATGATGCCTGAAAGCAGCACGAATGGCGAAGTTCGTCTCTATCGAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAAAAGGTGATCTTGAAAAAGCCTCTTGTAGACTCATTCCTTATCAATTATGATGGAGCCTATTGGCTTTTCGGTTCAGACCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAACCACACAAGAAGAACCCTATATATAATGGTGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTTTACAACGGGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGGAGACGTGTGCGCACCTTTAAGGTGGAAGTTCTTACCAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTTCCTGAGCCAAATAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACTGGAGGGTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACACAGGTTTATTGTTGGTAGTGCTTCAGTTGCCATTGTCGCTGTACTTGTTATATTACTAGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCCCCCAATTGGTGCACTCACAACTCGGGTAAGAGAAGTGATGCATTCATGGCTTGTGAAAGGTCATATCTGTGTTCGTCCAAACTGAGACGTTTTTGCAGCCGCTTGAACAGAGCAGTTTCATTCCTCAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCATTAAAAGGTCATTACTCACAGTTCACGTTATTAACAATGACTTATGATGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACACTATTCTAGATGTTCATCGGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGTATACCTCCTGAAGCGAGTGATTTTGATTCTGCAGTGCCAGTTAGGATCAGAGTAGAGAAACAGAACTCCCTGAATAACCGGTTCAAGTTGGATTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACCTGCAATGATATTGAGAGAGGATTCAGGATATGGCGTCAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTCATTGATGGAAGTCCATTGAAGTACAGAGGTGAGAAACATGCTCGGAGTCATAGAGGCTATAATATGATTCTCACTGGGGCAGCTTTCCTTGATAGCCAAGTTGCTTTTAAGAGGTATTGGAGTGAAGAAGCTAGCCCAGGGAGGGACTTTGTGGACAAGTCTTTCAATTGTGAGGACGTGCTCATGAATTACCTGTATGCAAATGGTAGCTCATCTCAGAATGTGGAGTATGTGAGGCCAGCATGGGCGATAGATACGTCGAAGTTATCTGGTGCTGCTATTAGCCGAAATACCCAAGTTCACTACAACAAGAGGAGCAACTGCCTGGTGAAATTTTCTGAAATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

573

Amino Acids

65.28

Weight (kDa)

9.39

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	6 - 193	1.3e-97	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	327 - 563	3.9e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	410
Acc36I	ACCTGC	1 cut(s)	1247
AccB1I	GGYRCC	1 cut(s)	215
AccB7I	CCANNNNNTGG	1 cut(s)	111
AccI	GTMKAC	2 cut(s)	150, 1093
AciI	CCGC	3 cut(s)	799, 930, 1699
AclWI	GGATC	2 cut(s)	1145, 1293
AcsI	RAATTY	3 cut(s)	1018, 1646, 1688
AcuI	CTGAAG	2 cut(s)	612, 1122
AcyI	GRCGYC	1 cut(s)	1273
AfaI	GTAC	6 cut(s)	248, 585, 603, 648, 669, 1337
AfiI	CCNNNNNNNGG	5 cut(s)	111, 488, 705, 962, 1456
AflIII	ACRYGT	1 cut(s)	403
AgeI	ACCGGT	1 cut(s)	1170
AgsI	TTSAA	7 cut(s)	136, 458, 805, 1024, 1177, 1333, 1480
AhlI	ACTAGT	1 cut(s)	862
AjiI	CACGTC	2 cut(s)	404, 1492
AjnI	CCWGG	2 cut(s)	1450, 1638
AjuI	GAANNNNNNNTTGG	2 cut(s)	218, 250
AloI	GAACNNNNNNTCC	2 cut(s)	849, 881
Alw21I	GWGCWC	3 cut(s)	713, 908, 1497
Alw26I	GTCTC	5 cut(s)	86, 394, 570, 778, 1016
Alw44I	GTGCAC	2 cut(s)	709, 904
AlwI	GGATC	2 cut(s)	1145, 1293
Ama87I	CYCGRG	2 cut(s)	721, 1200
AoxI	GGCC	2 cut(s)	469, 1550
ApaLI	GTGCAC	2 cut(s)	709, 904
ApeKI	GCWGC	5 cut(s)	60, 795, 896, 1394, 1589
ApoI	RAATTY	3 cut(s)	1018, 1646, 1688
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AsiGI	ACCGGT	1 cut(s)	1170
AspLEI	GCGC	2 cut(s)	411, 1680
AspS9I	GGNCC	2 cut(s)	266, 469
AsuC2I	CCSGG	2 cut(s)	1283, 1309
AsuHPI	GGTGA	4 cut(s)	139, 317, 1355, 1654
AsuNHI	GCTAGC	1 cut(s)	1445
AvaI	CYCGRG	2 cut(s)	721, 1200
AvaII	GGWCC	1 cut(s)	266
BaeGI	GKGCMC	2 cut(s)	713, 908
BanI	GGYRCC	1 cut(s)	215
BanII	GRGCYC	2 cut(s)	94, 325
BbsI	GAAGAC	1 cut(s)	865
Bbv12I	GWGCWC	3 cut(s)	713, 908, 1497
BbvI	GCAGC	5 cut(s)	72, 807, 908, 1406, 1576
BccI	CCATC	6 cut(s)	167, 528, 566, 1313, 1688, 1700
BciT130I	CCWGG	2 cut(s)	1452, 1640
BcnI	CCSGG	2 cut(s)	1283, 1309
BcoDI	GTCTC	5 cut(s)	86, 394, 570, 778, 1016
BcuI	ACTAGT	1 cut(s)	862
BfaI	CTAG	5 cut(s)	119, 662, 863, 1047, 1446
BfmI	CTRYAG	1 cut(s)	1122
BfuAI	ACCTGC	1 cut(s)	1247
BisI	GCNGC	7 cut(s)	61, 796, 799, 897, 931, 1395, 1590
BlsI	GCNGC	7 cut(s)	62, 797, 800, 898, 932, 1396, 1591
Bme1390I	CCNGG	4 cut(s)	1283, 1309, 1452, 1640
Bme18I	GGWCC	1 cut(s)	266
BmeT110I	CYCGRG	2 cut(s)	721, 1200
BmgBI	CACGTC	2 cut(s)	404, 1492
BmgT120I	GGNCC	2 cut(s)	266, 469
BmiI	GGNNCC	3 cut(s)	178, 217, 267
BmrFI	CCNGG	4 cut(s)	1283, 1309, 1452, 1640
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	3 cut(s)	39, 727, 994
BmtI	GCTAGC	1 cut(s)	1449
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	1 cut(s)	865
BpmI	CTGGAG	3 cut(s)	570, 612, 1232
Bpu10I	CCTNAGC	1 cut(s)	477
BpuMI	CCSGG	2 cut(s)	1283, 1309
BsaBI	GATNNNNATC	1 cut(s)	1054
BsaHI	GRCGYC	1 cut(s)	1273
BsaI	GGTCTC	1 cut(s)	570
BsaJI	CCNNGG	4 cut(s)	269, 1307, 1450, 1451
BsaWI	WCCGGW	1 cut(s)	1170
BsaXI	ACNNNNNCTCC	4 cut(s)	567, 585, 597, 615
Bsc4I	CCNNNNNNNGG	5 cut(s)	111, 488, 705, 962, 1456
Bse118I	RCCGGY	1 cut(s)	1170
Bse1I	ACTGG	3 cut(s)	553, 1130, 1393
Bse3DI	GCAATG	3 cut(s)	116, 502, 1249
Bse8I	GATNNNNATC	1 cut(s)	1054
BseBI	CCWGG	2 cut(s)	1452, 1640
BseDI	CCNNGG	4 cut(s)	269, 1307, 1450, 1451
BseGI	GGATG	4 cut(s)	18, 577, 1711, 1720
BseJI	GATNNNNATC	1 cut(s)	1054
BseLI	CCNNNNNNNGG	5 cut(s)	111, 488, 705, 962, 1456
BseMI	GCAATG	3 cut(s)	116, 502, 1249
BseMII	CTCAG	5 cut(s)	109, 468, 773, 838, 1544
BseNI	ACTGG	3 cut(s)	553, 1130, 1393
BseRI	GAGGAG	1 cut(s)	1642
BseSI	GKGCMC	2 cut(s)	713, 908
BseXI	GCAGC	5 cut(s)	72, 807, 908, 1406, 1576
BseYI	CCCAGC	1 cut(s)	1673
BsgI	GTGCAG	1 cut(s)	960
BshFI	GGCC	2 cut(s)	471, 1552
BshNI	GGYRCC	1 cut(s)	215
BshTI	ACCGGT	1 cut(s)	1170
BsiHKAI	GWGCWC	3 cut(s)	713, 908, 1497
BsiHKCI	CYCGRG	2 cut(s)	721, 1200
BsiSI	CCGG	3 cut(s)	1171, 1283, 1309
BslFI	GGGAC	2 cut(s)	446, 1472
BslI	CCNNNNNNNGG	5 cut(s)	111, 488, 705, 962, 1456
BsmAI	GTCTC	5 cut(s)	86, 394, 570, 778, 1016
BsmBI	CGTCTC	4 cut(s)	86, 394, 778, 1016
BsmFI	GGGAC	2 cut(s)	446, 1472
BsmI	GAATGC	1 cut(s)	740
BsnI	GGCC	2 cut(s)	471, 1552
Bso31I	GGTCTC	1 cut(s)	570
BsoBI	CYCGRG	2 cut(s)	721, 1200
Bsp1286I	GDGCHC	5 cut(s)	94, 325, 713, 908, 1497
Bsp1407I	TGTACA	1 cut(s)	601
Bsp143I	GATC	3 cut(s)	129, 1137, 1285
BspACI	CCGC	3 cut(s)	799, 930, 1699
BspANI	GGCC	2 cut(s)	471, 1552
BspCNI	CTCAG	5 cut(s)	108, 469, 774, 837, 1543
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	3 cut(s)	178, 217, 267
BspMAI	CTGCAG	1 cut(s)	1126
BspMI	ACCTGC	1 cut(s)	1247
BspOI	GCTAGC	1 cut(s)	1449
BspPI	GGATC	2 cut(s)	1145, 1293
BspT107I	GGYRCC	1 cut(s)	215
BspTNI	GGTCTC	1 cut(s)	570
BsrDI	GCAATG	3 cut(s)	116, 502, 1249
BsrFI	RCCGGY	1 cut(s)	1170
BsrGI	TGTACA	1 cut(s)	601
BsrI	ACTGG	3 cut(s)	553, 1130, 1393
BssAI	RCCGGY	1 cut(s)	1170
BssECI	CCNNGG	4 cut(s)	269, 1307, 1450, 1451
BssMI	GATC	3 cut(s)	129, 1137, 1285
BssNAI	GTATAC	1 cut(s)	1094
BssNI	GRCGYC	1 cut(s)	1273
BssT1I	CCWWGG	1 cut(s)	269
Bst1107I	GTATAC	1 cut(s)	1094
Bst2UI	CCWGG	2 cut(s)	1452, 1640
Bst4CI	ACNGT	6 cut(s)	206, 234, 251, 383, 581, 978
BstACI	GRCGYC	1 cut(s)	1273
BstAUI	TGTACA	1 cut(s)	601
BstC8I	GCNNGC	3 cut(s)	257, 1447, 1554
BstDEI	CTNAG	5 cut(s)	95, 477, 782, 824, 1530
BstF5I	GGATG	4 cut(s)	18, 577, 1711, 1720
BstHHI	GCGC	2 cut(s)	411, 1680
BstKTI	GATC	3 cut(s)	132, 1140, 1288
BstMAI	GTCTC	5 cut(s)	86, 394, 570, 778, 1016
BstMBI	GATC	3 cut(s)	129, 1137, 1285
BstMWI	GCNNNNNNNGC	5 cut(s)	69, 632, 641, 746, 947
BstNI	CCWGG	2 cut(s)	1452, 1640
BstNSI	RCATGY	1 cut(s)	1355
BstSCI	CCNGG	4 cut(s)	1281, 1307, 1450, 1638
BstSFI	CTRYAG	1 cut(s)	1122
BstSLI	GKGCMC	2 cut(s)	713, 908
BstV1I	GCAGC	5 cut(s)	72, 807, 908, 1406, 1576
BstV2I	GAAGAC	1 cut(s)	865
BstZ17I	GTATAC	1 cut(s)	1094
BsuRI	GGCC	2 cut(s)	471, 1552
BtrI	CACGTC	2 cut(s)	404, 1492
BtsCI	GGATG	4 cut(s)	18, 577, 1711, 1720
BtsI	GCAGTG	2 cut(s)	940, 1131
BtsIMutI	CAGTG	4 cut(s)	211, 940, 1131, 1386
BveI	ACCTGC	1 cut(s)	1247
Cac8I	GCNNGC	3 cut(s)	257, 1447, 1554
CciI	TCATGA	1 cut(s)	1497
CfoI	GCGC	2 cut(s)	411, 1680
Cfr10I	RCCGGY	1 cut(s)	1170
Cfr13I	GGNCC	2 cut(s)	266, 469
CseI	GACGC	1 cut(s)	1262
Csp6I	GTAC	6 cut(s)	247, 584, 602, 647, 668, 1336
CspAI	ACCGGT	1 cut(s)	1170
CviAII	CATG	6 cut(s)	106, 691, 745, 1352, 1498, 1557
CviQI	GTAC	6 cut(s)	247, 584, 602, 647, 668, 1336
DdeI	CTNAG	5 cut(s)	95, 477, 782, 824, 1530
DpnI	GATC	3 cut(s)	131, 1139, 1287
DpnII	GATC	3 cut(s)	129, 1137, 1285
EciI	GGCGGA	1 cut(s)	1714
Eco130I	CCWWGG	1 cut(s)	269
Eco24I	GRGCYC	2 cut(s)	94, 325
Eco31I	GGTCTC	1 cut(s)	570
Eco47I	GGWCC	1 cut(s)	266
Eco57I	CTGAAG	2 cut(s)	612, 1122
Eco88I	CYCGRG	2 cut(s)	721, 1200
EcoO109I	RGGNCCY	1 cut(s)	266
EcoRII	CCWGG	2 cut(s)	1450, 1638
EcoT14I	CCWWGG	1 cut(s)	269
EcoT22I	ATGCAT	2 cut(s)	12, 742
EcoT38I	GRGCYC	2 cut(s)	94, 325
ErhI	CCWWGG	1 cut(s)	269
Esp3I	CGTCTC	4 cut(s)	86, 394, 778, 1016
FaeI	CATG	6 cut(s)	109, 694, 748, 1355, 1501, 1560
FalI	AAGNNNNNCTT	2 cut(s)	116, 148
FaqI	GGGAC	2 cut(s)	446, 1472
FatI	CATG	6 cut(s)	105, 690, 744, 1351, 1497, 1556
FblI	GTMKAC	2 cut(s)	150, 1093
Fnu4HI	GCNGC	7 cut(s)	61, 796, 799, 897, 931, 1395, 1590
FokI	GGATG	3 cut(s)	5, 584, 1718
FriOI	GRGCYC	2 cut(s)	94, 325
Fsp4HI	GCNGC	7 cut(s)	61, 796, 799, 897, 931, 1395, 1590
FspAI	RTGCGCAY	1 cut(s)	410
FspBI	CTAG	5 cut(s)	119, 662, 863, 1047, 1446
FspI	TGCGCA	1 cut(s)	410
GlaI	GCGC	2 cut(s)	410, 1679
GluI	GCNGC	7 cut(s)	61, 796, 799, 897, 931, 1395, 1590
GsaI	CCCAGC	1 cut(s)	1677
GsuI	CTGGAG	3 cut(s)	570, 612, 1232
HaeIII	GGCC	2 cut(s)	471, 1552
HapII	CCGG	3 cut(s)	1171, 1283, 1309
HgaI	GACGC	1 cut(s)	1262
HhaI	GCGC	2 cut(s)	411, 1680
Hin1I	GRCGYC	1 cut(s)	1273
Hin1II	CATG	6 cut(s)	109, 694, 748, 1355, 1501, 1560
Hin6I	GCGC	2 cut(s)	409, 1678
HinP1I	GCGC	2 cut(s)	409, 1678
HincII	GTYRAC	1 cut(s)	1277
HindII	GTYRAC	1 cut(s)	1277
HindIII	AAGCTT	1 cut(s)	948
HpaII	CCGG	3 cut(s)	1171, 1283, 1309
HphI	GGTGA	4 cut(s)	139, 317, 1355, 1654
Hpy188I	TCNGA	6 cut(s)	199, 827, 1142, 1359, 1533, 1654
Hpy99I	CGWCG	1 cut(s)	1576
HpyAV	CCTTC	3 cut(s)	482, 597, 1696
HpyCH4III	ACNGT	6 cut(s)	206, 234, 251, 383, 581, 978
HpyCH4IV	ACGT	6 cut(s)	392, 403, 787, 983, 1491, 1571
HpyF10VI	GCNNNNNNNGC	5 cut(s)	69, 632, 641, 746, 947
HpyF3I	CTNAG	5 cut(s)	95, 477, 782, 824, 1530
HpySE526I	ACGT	6 cut(s)	392, 403, 787, 983, 1491, 1571
Hsp92I	GRCGYC	1 cut(s)	1273
Hsp92II	CATG	6 cut(s)	109, 694, 748, 1355, 1501, 1560
HspAI	GCGC	2 cut(s)	409, 1678
Kzo9I	GATC	3 cut(s)	129, 1137, 1285
LmnI	GCTCC	4 cut(s)	176, 677, 1213, 1629
Lsp1109I	GCAGC	5 cut(s)	72, 807, 908, 1406, 1576
LweI	GCATC	3 cut(s)	39, 727, 994
MaeI	CTAG	5 cut(s)	119, 662, 863, 1047, 1446
MaeII	ACGT	6 cut(s)	392, 403, 787, 983, 1491, 1571
MaeIII	GTNAC	1 cut(s)	305
MalI	GATC	3 cut(s)	131, 1139, 1287
MboI	GATC	3 cut(s)	129, 1137, 1285
MboII	GAAGA	4 cut(s)	298, 870, 956, 1451
MfeI	CAATTG	2 cut(s)	703, 1480
MhlI	GDGCHC	5 cut(s)	94, 325, 713, 908, 1497
MluCI	AATT	8 cut(s)	166, 703, 1018, 1068, 1480, 1501, 1646, 1688
MlyI	GAGTC	4 cut(s)	109, 146, 1192, 1369
MmeI	TCCRAC	2 cut(s)	216, 1161
Mph1103I	ATGCAT	2 cut(s)	12, 742
MseI	TTAA	7 cut(s)	417, 837, 915, 959, 989, 1035, 1422
MslI	CAYNNNNRTG	3 cut(s)	528, 766, 1232
MspI	CCGG	3 cut(s)	1171, 1283, 1309
MspR9I	CCNGG	4 cut(s)	1283, 1309, 1452, 1640
MunI	CAATTG	2 cut(s)	703, 1480
Mva1269I	GAATGC	1 cut(s)	740
MvaI	CCWGG	2 cut(s)	1452, 1640
MwoI	GCNNNNNNNGC	5 cut(s)	69, 632, 641, 746, 947
NciI	CCSGG	2 cut(s)	1283, 1309
NdeII	GATC	3 cut(s)	129, 1137, 1285
NheI	GCTAGC	1 cut(s)	1445
NlaIII	CATG	6 cut(s)	109, 694, 748, 1355, 1501, 1560
NlaIV	GGNNCC	3 cut(s)	178, 217, 267
NmuCI	GTSAC	1 cut(s)	305
NsbI	TGCGCA	1 cut(s)	410
NsiI	ATGCAT	2 cut(s)	12, 742
NspI	RCATGY	1 cut(s)	1355
PaeR7I	CTCGAG	1 cut(s)	1200
PagI	TCATGA	1 cut(s)	1497
PasI	CCCWGGG	1 cut(s)	1451
PcsI	WCGNNNNNNNCGW	1 cut(s)	85
PctI	GAATGC	1 cut(s)	740
PfeI	GAWTC	7 cut(s)	358, 596, 694, 1118, 1184, 1260, 1381
PflMI	CCANNNNNTGG	1 cut(s)	111
PinAI	ACCGGT	1 cut(s)	1170
PkrI	GCNGC	7 cut(s)	62, 797, 800, 898, 932, 1396, 1591
PleI	GAGTC	4 cut(s)	109, 146, 1192, 1368
PpsI	GAGTC	4 cut(s)	109, 146, 1192, 1368
PpuMI	RGGWCCY	1 cut(s)	266
Psp5II	RGGWCCY	1 cut(s)	266
Psp6I	CCWGG	2 cut(s)	1450, 1638
PspFI	CCCAGC	1 cut(s)	1673
PspGI	CCWGG	2 cut(s)	1450, 1638
PspN4I	GGNNCC	3 cut(s)	178, 217, 267
PspPI	GGNCC	2 cut(s)	266, 469
PspPPI	RGGWCCY	1 cut(s)	266
PspXI	VCTCGAGB	1 cut(s)	1200
PstI	CTGCAG	1 cut(s)	1126
RsaI	GTAC	6 cut(s)	248, 585, 603, 648, 669, 1337
RsaNI	GTAC	6 cut(s)	247, 584, 602, 647, 668, 1336
RseI	CAYNNNNRTG	3 cut(s)	528, 766, 1232
SaqAI	TTAA	7 cut(s)	417, 837, 915, 959, 989, 1035, 1422
SatI	GCNGC	7 cut(s)	61, 796, 799, 897, 931, 1395, 1590
Sau3AI	GATC	3 cut(s)	129, 1137, 1285
Sau96I	GGNCC	2 cut(s)	266, 469
SchI	GAGTC	4 cut(s)	109, 146, 1192, 1369
ScrFI	CCNGG	4 cut(s)	1283, 1309, 1452, 1640
SduI	GDGCHC	5 cut(s)	94, 325, 713, 908, 1497
SfaNI	GCATC	3 cut(s)	39, 727, 994
SfcI	CTRYAG	1 cut(s)	1122
Sfr274I	CTCGAG	1 cut(s)	1200
SinI	GGWCC	1 cut(s)	266
SlaI	CTCGAG	1 cut(s)	1200
SmiMI	CAYNNNNRTG	3 cut(s)	528, 766, 1232
SmlI	CTYRAG	1 cut(s)	1200
SmoI	CTYRAG	1 cut(s)	1200
SpeI	ACTAGT	1 cut(s)	862
Sse9I	AATT	8 cut(s)	166, 703, 1018, 1068, 1480, 1501, 1646, 1688
SsiI	CCGC	3 cut(s)	799, 930, 1699
SspMI	CTAG	5 cut(s)	119, 662, 863, 1047, 1446
StyD4I	CCNGG	4 cut(s)	1281, 1307, 1450, 1638
StyI	CCWWGG	1 cut(s)	269
TaaI	ACNGT	6 cut(s)	206, 234, 251, 383, 581, 978
TaiI	ACGT	6 cut(s)	395, 406, 790, 986, 1494, 1574
TaqI	TCGA	5 cut(s)	88, 325, 528, 1201, 1574
TasI	AATT	8 cut(s)	166, 703, 1018, 1068, 1480, 1501, 1646, 1688
TatI	WGTACW	4 cut(s)	601, 646, 667, 1335
TauI	GCSGC	2 cut(s)	801, 933
TfiI	GAWTC	7 cut(s)	358, 596, 694, 1118, 1184, 1260, 1381
Tru1I	TTAA	7 cut(s)	417, 837, 915, 959, 989, 1035, 1422
Tru9I	TTAA	7 cut(s)	417, 837, 915, 959, 989, 1035, 1422
TscAI	CASTG	4 cut(s)	211, 940, 1131, 1393
TseFI	GTSAC	1 cut(s)	305
TseI	GCWGC	5 cut(s)	60, 795, 896, 1394, 1589
Tsp45I	GTSAC	1 cut(s)	305
TspDTI	ATGAA	5 cut(s)	456, 733, 807, 1044, 1514
TspRI	CASTG	4 cut(s)	211, 940, 1131, 1393
Van91I	CCANNNNNTGG	1 cut(s)	111
VneI	GTGCAC	2 cut(s)	709, 904
VpaK11BI	GGWCC	1 cut(s)	266
XapI	RAATTY	3 cut(s)	1018, 1646, 1688
XbaI	TCTAGA	2 cut(s)	118, 1046
XceI	RCATGY	1 cut(s)	1355
XcmI	CCANNNNNNNNNTGG	1 cut(s)	209
XhoI	CTCGAG	1 cut(s)	1200
XmiI	GTMKAC	2 cut(s)	150, 1093
XspI	CTAG	5 cut(s)	119, 662, 863, 1047, 1446
Zsp2I	ATGCAT	2 cut(s)	12, 742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.