Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

27394674 .. 27400714

Gene Structure 6041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G012250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGGTTTCAGTCCTGCCGCCGGCGGCGGTGGTACGAGCAATGGTACCGGTAATAATAGCACCAGTAATAATAATAATAGTAATAATAATAGTAGCTGCTGTAACATGAGCCTCAAGTGTAGGTGTAAATGGAGGTGCCTGATGTCGTCGGGCTTCGTTTTCTTCTTCGGCTGTTTTGTGTTGTTCGGATCAGTCGCTACGATTTATGTGTGGTTTGCTTTCACGCCGTATTATTACGCTCGCAGCACGGCCGAGTCGGAGTCGTCGGCGGCCGCCGTGCTTGGGTGTCAGGAGGACAATGAAGGTTCTTGGTCCGTTGGTGTTTTCTTCGGTGACTCTCCCTTTAATCTCAAGCCCATTGAAGCTGTGAATGTATGGAGAGACAAGAGTGCCGCCTGGCCTGTGGCAAACCCTGTTGTGACTTGTGCATCAGTTTCTGAATCTGGTTTCCCAAGTAATTTTGTTGCTGATCCTTTCCTTTATGTCCAGGGAGATACTTTTTACATGTTCTATGAAACCAAAAATTCAATCACTATGCAAGGAGATATTGGGGTTTCAAAAAGCTCTGATAAAGGAGCAACATGGCAGCAATTAGGCATTGCCTTGGATGAAGAGTGGCATCTCTCTTATCCATATGTCTTTGACTACCTTGGCCATATATATATGATGCCTGAAAGCAGCACGAATGGCGAAGTTCGTCTCTATCGAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAGAAGGTGATCTTGAAAAAGCCTCTTGTAGACTCATTCCTTATCAATTATGATGGAGCCTATTGGCTTTTCGGTTCAGACCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAACCACACAAGAAGAACCCTATATATAATGGTGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTTTACAACGAGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGGAGACGTGTGCGCACCTTTAAGGTGGAAGTTCTTACCAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTTCCTGAGCCAAATAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACTGGAGGGTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACACAGGTTTATTGTTGGTAGTGCTTCAGTTGCCATTGTCGCTGTACTTGTTATATTACTAGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCCCCCAATTGGTGCACTCACAACTCGGGTAAGAGAAGTGATGCATTCATGGCTTGTGGAAGGTCATATCTGTGTTCGTCCAAACTGAGACGTTTTAGCAGCCGCTTGAACAGAGCAGTTTCATTCCTCAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCATTAAAAGGTCATTACTCACAGTTCACGTTATTAACAATGACTTATGATGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACACTATTCCAGATGTTCATCGGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGAATACCTCCTGAAGCGAGTGATTTTGACTCTGCAGTGCCAGTTAGGATCAGAGTAGAGAAACAGAACTCCCTGAATAACCGGTTCAAGTTGGATTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACCTGCAATGATATTGAGAGAGGATTCAGGATATGGCGTCAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTCATTGATGGAAGTCCATTGAAGTACAGAGGTGAGAAACATGCTCGGAGTCATAGAGGCTATAATATGATTCTCACTGGGGCAGCTTTCCTTGATAGCCAAGTAGCTTTTAAGAGGTATTGGAGTGAAGAAGCTAGCCCAGGGAGGGACTTTGTGGACGAGTCTTTCAATTGCGAGGACGTGCTTATGAATTACCTGTATGCAAATGCTAGCTCATCTCAGAATGTAGAGTATGTGAGGCCAGCATGGGCGATAGATACGTCGAAGTTATCTGGTGCTGCTATTAGCCGAAATACCCAAGTTCACTACAACAAGAGGAGCAACTGCCTGGTGAAATTTTCTGAAATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

779

Amino Acids

87.49

Weight (kDa)

8.8

Isoelectric Point (pI)

42.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	96 - 399	5.9e-178	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	533 - 768	1.4e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1028
Acc36I	ACCTGC	1 cut(s)	1865
Acc65I	GGTACC	1 cut(s)	44
AccB1I	GGYRCC	3 cut(s)	44, 135, 833
AccB7I	CCANNNNNTGG	1 cut(s)	729
AccI	GTMKAC	1 cut(s)	768
AciI	CCGC	9 cut(s)	18, 24, 27, 269, 273, 393, 1417, 1548, 2317
AclWI	GGATC	4 cut(s)	196, 464, 1763, 1911
AcoI	YGGCCR	3 cut(s)	249, 270, 652
AcsI	RAATTY	4 cut(s)	523, 1636, 2264, 2306
AcuI	CTGAAG	2 cut(s)	1230, 1740
AcyI	GRCGYC	1 cut(s)	1891
AfaI	GTAC	8 cut(s)	34, 46, 866, 1203, 1221, 1266, 1287, 1955
AfiI	CCNNNNNNNGG	7 cut(s)	20, 282, 729, 1106, 1323, 1580, 2074
AflIII	ACRYGT	2 cut(s)	504, 1021
AgeI	ACCGGT	2 cut(s)	47, 1788
AhlI	ACTAGT	1 cut(s)	1480
AjiI	CACGTC	2 cut(s)	1022, 2110
AjnI	CCWGG	4 cut(s)	395, 486, 2068, 2256
AjuI	GAANNNNNNNTTGG	2 cut(s)	836, 868
AloI	GAACNNNNNNTCC	2 cut(s)	1467, 1499
Alw21I	GWGCWC	2 cut(s)	1331, 1526
Alw26I	GTCTC	6 cut(s)	375, 704, 1012, 1188, 1396, 1634
Alw44I	GTGCAC	2 cut(s)	1327, 1522
AlwI	GGATC	4 cut(s)	196, 464, 1763, 1911
AlwNI	CAGNNNCTG	1 cut(s)	437
Ama87I	CYCGRG	2 cut(s)	1339, 1818
AoxI	GGCC	6 cut(s)	249, 270, 398, 652, 1087, 2168
ApaLI	GTGCAC	2 cut(s)	1327, 1522
ApeKI	GCWGC	8 cut(s)	96, 243, 586, 678, 1413, 1514, 2012, 2207
ApoI	RAATTY	4 cut(s)	523, 1636, 2264, 2306
ArsI	GACNNNNNNTTYG	2 cut(s)	917, 949
AsiGI	ACCGGT	2 cut(s)	47, 1788
Asp718I	GGTACC	1 cut(s)	44
AspLEI	GCGC	2 cut(s)	1029, 2298
AspS9I	GGNCC	3 cut(s)	312, 884, 1087
AsuC2I	CCSGG	2 cut(s)	1901, 1927
AsuHPI	GGTGA	5 cut(s)	344, 757, 935, 1973, 2272
AsuNHI	GCTAGC	2 cut(s)	2063, 2138
AvaI	CYCGRG	2 cut(s)	1339, 1818
AvaII	GGWCC	2 cut(s)	312, 884
BaeGI	GKGCMC	2 cut(s)	1331, 1526
BalI	TGGCCA	1 cut(s)	654
BanI	GGYRCC	3 cut(s)	44, 135, 833
BanII	GRGCYC	2 cut(s)	712, 943
BbsI	GAAGAC	1 cut(s)	1483
Bbv12I	GWGCWC	2 cut(s)	1331, 1526
BbvI	GCAGC	8 cut(s)	83, 255, 598, 690, 1425, 1526, 2024, 2194
BccI	CCATC	6 cut(s)	785, 1146, 1184, 1931, 2306, 2318
BceAI	ACGGC	3 cut(s)	211, 260, 264
BciT130I	CCWGG	4 cut(s)	397, 488, 2070, 2258
BcnI	CCSGG	2 cut(s)	1901, 1927
BcoDI	GTCTC	6 cut(s)	375, 704, 1012, 1188, 1396, 1634
BcuI	ACTAGT	1 cut(s)	1480
BfaI	CTAG	5 cut(s)	737, 1280, 1481, 2064, 2139
BfmI	CTRYAG	1 cut(s)	1740
BfuAI	ACCTGC	1 cut(s)	1865
Bme1390I	CCNGG	6 cut(s)	397, 488, 1901, 1927, 2070, 2258
Bme18I	GGWCC	2 cut(s)	312, 884
BmeT110I	CYCGRG	2 cut(s)	1339, 1818
BmgBI	CACGTC	2 cut(s)	1022, 2110
BmgT120I	GGNCC	3 cut(s)	312, 884, 1087
BmiI	GGNNCC	5 cut(s)	46, 137, 796, 835, 885
BmrFI	CCNGG	6 cut(s)	397, 488, 1901, 1927, 2070, 2258
BmrI	ACTGGG	1 cut(s)	2016
BmsI	GCATC	5 cut(s)	437, 628, 657, 1345, 1612
BmtI	GCTAGC	2 cut(s)	2067, 2142
BmuI	ACTGGG	1 cut(s)	2016
BpiI	GAAGAC	1 cut(s)	1483
BpmI	CTGGAG	3 cut(s)	1188, 1230, 1850
Bpu10I	CCTNAGC	1 cut(s)	1095
BpuEI	CTTGAG	2 cut(s)	98, 335
BpuMI	CCSGG	2 cut(s)	1901, 1927
BsaBI	GATNNNNATC	1 cut(s)	1672
BsaHI	GRCGYC	1 cut(s)	1891
BsaI	GGTCTC	1 cut(s)	1188
BsaJI	CCNNGG	7 cut(s)	487, 603, 649, 887, 1925, 2068, 2069
BsaWI	WCCGGW	2 cut(s)	47, 1788
BsaXI	ACNNNNNCTCC	4 cut(s)	1185, 1203, 1215, 1233
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 282, 729, 1106, 1323, 1580, 2074
Bse118I	RCCGGY	3 cut(s)	20, 47, 1788
Bse1I	ACTGG	4 cut(s)	63, 1171, 1748, 2011
Bse3DI	GCAATG	5 cut(s)	46, 597, 734, 1120, 1867
Bse8I	GATNNNNATC	1 cut(s)	1672
BseBI	CCWGG	4 cut(s)	397, 488, 2070, 2258
BseDI	CCNNGG	7 cut(s)	487, 603, 649, 887, 1925, 2068, 2069
BseGI	GGATG	4 cut(s)	613, 1195, 2329, 2338
BseJI	GATNNNNATC	1 cut(s)	1672
BseLI	CCNNNNNNNGG	7 cut(s)	20, 282, 729, 1106, 1323, 1580, 2074
BseMI	GCAATG	5 cut(s)	46, 597, 734, 1120, 1867
BseMII	CTCAG	5 cut(s)	727, 1086, 1391, 1456, 2162
BseNI	ACTGG	4 cut(s)	63, 1171, 1748, 2011
BseRI	GAGGAG	1 cut(s)	2260
BseSI	GKGCMC	2 cut(s)	1331, 1526
BseX3I	CGGCCG	2 cut(s)	249, 270
BseXI	GCAGC	8 cut(s)	83, 255, 598, 690, 1425, 1526, 2024, 2194
BseYI	CCCAGC	1 cut(s)	2291
BsgI	GTGCAG	1 cut(s)	1578
Bsh1285I	CGRYCG	2 cut(s)	252, 273
BshFI	GGCC	6 cut(s)	251, 272, 400, 654, 1089, 2170
BshNI	GGYRCC	3 cut(s)	44, 135, 833
BshTI	ACCGGT	2 cut(s)	47, 1788
BsiEI	CGRYCG	2 cut(s)	252, 273
BsiHKAI	GWGCWC	2 cut(s)	1331, 1526
BsiHKCI	CYCGRG	2 cut(s)	1339, 1818
BsiSI	CCGG	5 cut(s)	21, 48, 1789, 1901, 1927
BslFI	GGGAC	2 cut(s)	1064, 2090
BslI	CCNNNNNNNGG	7 cut(s)	20, 282, 729, 1106, 1323, 1580, 2074
BsmAI	GTCTC	6 cut(s)	375, 704, 1012, 1188, 1396, 1634
BsmBI	CGTCTC	4 cut(s)	704, 1012, 1396, 1634
BsmFI	GGGAC	2 cut(s)	1064, 2090
BsmI	GAATGC	1 cut(s)	1358
BsnI	GGCC	6 cut(s)	251, 272, 400, 654, 1089, 2170
Bso31I	GGTCTC	1 cut(s)	1188
BsoBI	CYCGRG	2 cut(s)	1339, 1818
Bsp1286I	GDGCHC	4 cut(s)	712, 943, 1331, 1526
Bsp1407I	TGTACA	1 cut(s)	1219
Bsp143I	GATC	5 cut(s)	188, 469, 747, 1755, 1903
BspACI	CCGC	9 cut(s)	18, 24, 27, 269, 273, 393, 1417, 1548, 2317
BspANI	GGCC	6 cut(s)	251, 272, 400, 654, 1089, 2170
BspCNI	CTCAG	5 cut(s)	726, 1087, 1392, 1455, 2161
BspLI	GGNNCC	5 cut(s)	46, 137, 796, 835, 885
BspMAI	CTGCAG	1 cut(s)	1744
BspMI	ACCTGC	1 cut(s)	1865
BspOI	GCTAGC	2 cut(s)	2067, 2142
BspPI	GGATC	4 cut(s)	196, 464, 1763, 1911
BspT107I	GGYRCC	3 cut(s)	44, 135, 833
BspTNI	GGTCTC	1 cut(s)	1188
BsrDI	GCAATG	5 cut(s)	46, 597, 734, 1120, 1867
BsrFI	RCCGGY	3 cut(s)	20, 47, 1788
BsrGI	TGTACA	1 cut(s)	1219
BsrI	ACTGG	4 cut(s)	63, 1171, 1748, 2011
BssAI	RCCGGY	3 cut(s)	20, 47, 1788
BssECI	CCNNGG	7 cut(s)	487, 603, 649, 887, 1925, 2068, 2069
BssMI	GATC	5 cut(s)	188, 469, 747, 1755, 1903
BssNI	GRCGYC	1 cut(s)	1891
BssT1I	CCWWGG	3 cut(s)	603, 649, 887
Bst2UI	CCWGG	4 cut(s)	397, 488, 2070, 2258
Bst4CI	ACNGT	6 cut(s)	824, 852, 869, 1001, 1199, 1596
Bst6I	CTCTTC	1 cut(s)	606
BstACI	GRCGYC	1 cut(s)	1891
BstAUI	TGTACA	1 cut(s)	1219
BstC8I	GCNNGC	6 cut(s)	22, 241, 875, 2065, 2140, 2172
BstDEI	CTNAG	5 cut(s)	713, 1095, 1400, 1442, 2148
BstF5I	GGATG	4 cut(s)	613, 1195, 2329, 2338
BstHHI	GCGC	2 cut(s)	1029, 2298
BstKTI	GATC	5 cut(s)	191, 472, 750, 1758, 1906
BstMAI	GTCTC	6 cut(s)	375, 704, 1012, 1188, 1396, 1634
BstMBI	GATC	5 cut(s)	188, 469, 747, 1755, 1903
BstMCI	CGRYCG	2 cut(s)	252, 273
BstMWI	GCNNNNNNNGC	5 cut(s)	687, 1250, 1259, 1364, 1565
BstNI	CCWGG	4 cut(s)	397, 488, 2070, 2258
BstNSI	RCATGY	2 cut(s)	508, 1973
BstSCI	CCNGG	6 cut(s)	395, 486, 1899, 1925, 2068, 2256
BstSFI	CTRYAG	1 cut(s)	1740
BstSLI	GKGCMC	2 cut(s)	1331, 1526
BstV1I	GCAGC	8 cut(s)	83, 255, 598, 690, 1425, 1526, 2024, 2194
BstV2I	GAAGAC	1 cut(s)	1483
BstZI	CGGCCG	2 cut(s)	249, 270
BsuRI	GGCC	6 cut(s)	251, 272, 400, 654, 1089, 2170
BtrI	CACGTC	2 cut(s)	1022, 2110
BtsCI	GGATG	4 cut(s)	613, 1195, 2329, 2338
BtsI	GCAGTG	2 cut(s)	1558, 1749
BtsIMutI	CAGTG	4 cut(s)	829, 1558, 1749, 2004
BveI	ACCTGC	1 cut(s)	1865
Cac8I	GCNNGC	6 cut(s)	22, 241, 875, 2065, 2140, 2172
CaiI	CAGNNNCTG	1 cut(s)	437
CciNI	GCGGCCGC	1 cut(s)	270
CfoI	GCGC	2 cut(s)	1029, 2298
Cfr10I	RCCGGY	3 cut(s)	20, 47, 1788
Cfr13I	GGNCC	3 cut(s)	312, 884, 1087
CseI	GACGC	1 cut(s)	1880
Csp6I	GTAC	8 cut(s)	33, 45, 865, 1202, 1220, 1265, 1286, 1954
CspAI	ACCGGT	2 cut(s)	47, 1788
CviAII	CATG	8 cut(s)	106, 505, 582, 724, 1309, 1363, 1970, 2175
CviQI	GTAC	8 cut(s)	33, 45, 865, 1202, 1220, 1265, 1286, 1954
DdeI	CTNAG	5 cut(s)	713, 1095, 1400, 1442, 2148
DpnI	GATC	5 cut(s)	190, 471, 749, 1757, 1905
DpnII	GATC	5 cut(s)	188, 469, 747, 1755, 1903
EaeI	YGGCCR	3 cut(s)	249, 270, 652
EagI	CGGCCG	2 cut(s)	249, 270
Eam1104I	CTCTTC	1 cut(s)	606
EarI	CTCTTC	1 cut(s)	606
EciI	GGCGGA	1 cut(s)	2332
EclXI	CGGCCG	2 cut(s)	249, 270
Eco130I	CCWWGG	3 cut(s)	603, 649, 887
Eco24I	GRGCYC	2 cut(s)	712, 943
Eco31I	GGTCTC	1 cut(s)	1188
Eco47I	GGWCC	2 cut(s)	312, 884
Eco52I	CGGCCG	2 cut(s)	249, 270
Eco57I	CTGAAG	2 cut(s)	1230, 1740
Eco88I	CYCGRG	2 cut(s)	1339, 1818
EcoO109I	RGGNCCY	1 cut(s)	884
EcoRII	CCWGG	4 cut(s)	395, 486, 2068, 2256
EcoT14I	CCWWGG	3 cut(s)	603, 649, 887
EcoT22I	ATGCAT	1 cut(s)	1360
EcoT38I	GRGCYC	2 cut(s)	712, 943
ErhI	CCWWGG	3 cut(s)	603, 649, 887
Esp3I	CGTCTC	4 cut(s)	704, 1012, 1396, 1634
FaeI	CATG	8 cut(s)	109, 508, 585, 727, 1312, 1366, 1973, 2178
FalI	AAGNNNNNCTT	2 cut(s)	734, 766
FaqI	GGGAC	2 cut(s)	1064, 2090
FatI	CATG	8 cut(s)	105, 504, 581, 723, 1308, 1362, 1969, 2174
FauNDI	CATATG	1 cut(s)	634
FblI	GTMKAC	1 cut(s)	768
FokI	GGATG	3 cut(s)	620, 1202, 2336
FriOI	GRGCYC	2 cut(s)	712, 943
FspAI	RTGCGCAY	1 cut(s)	1028
FspBI	CTAG	5 cut(s)	737, 1280, 1481, 2064, 2139
FspI	TGCGCA	1 cut(s)	1028
GlaI	GCGC	2 cut(s)	1028, 2297
GsaI	CCCAGC	1 cut(s)	2295
GsuI	CTGGAG	3 cut(s)	1188, 1230, 1850
HaeIII	GGCC	6 cut(s)	251, 272, 400, 654, 1089, 2170
HapII	CCGG	5 cut(s)	21, 48, 1789, 1901, 1927
HgaI	GACGC	1 cut(s)	1880
HhaI	GCGC	2 cut(s)	1029, 2298
Hin1I	GRCGYC	1 cut(s)	1891
Hin1II	CATG	8 cut(s)	109, 508, 585, 727, 1312, 1366, 1973, 2178
Hin6I	GCGC	2 cut(s)	1027, 2296
HinP1I	GCGC	2 cut(s)	1027, 2296
HincII	GTYRAC	1 cut(s)	1895
HindII	GTYRAC	1 cut(s)	1895
HindIII	AAGCTT	1 cut(s)	1566
HpaII	CCGG	5 cut(s)	21, 48, 1789, 1901, 1927
HphI	GGTGA	5 cut(s)	344, 757, 935, 1973, 2272
Hpy99I	CGWCG	3 cut(s)	151, 268, 2194
HpyAV	CCTTC	6 cut(s)	296, 736, 1100, 1215, 1368, 2314
HpyCH4III	ACNGT	6 cut(s)	824, 852, 869, 1001, 1199, 1596
HpyCH4IV	ACGT	6 cut(s)	1010, 1021, 1405, 1601, 2109, 2189
HpyF10VI	GCNNNNNNNGC	5 cut(s)	687, 1250, 1259, 1364, 1565
HpyF3I	CTNAG	5 cut(s)	713, 1095, 1400, 1442, 2148
HpySE526I	ACGT	6 cut(s)	1010, 1021, 1405, 1601, 2109, 2189
Hsp92I	GRCGYC	1 cut(s)	1891
Hsp92II	CATG	8 cut(s)	109, 508, 585, 727, 1312, 1366, 1973, 2178
HspAI	GCGC	2 cut(s)	1027, 2296
KpnI	GGTACC	1 cut(s)	48
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Kzo9I	GATC	5 cut(s)	188, 469, 747, 1755, 1903
LmnI	GCTCC	5 cut(s)	575, 794, 1295, 1831, 2247
Lsp1109I	GCAGC	8 cut(s)	83, 255, 598, 690, 1425, 1526, 2024, 2194
LweI	GCATC	5 cut(s)	437, 628, 657, 1345, 1612
MaeI	CTAG	5 cut(s)	737, 1280, 1481, 2064, 2139
MaeII	ACGT	6 cut(s)	1010, 1021, 1405, 1601, 2109, 2189
MaeIII	GTNAC	4 cut(s)	101, 332, 418, 923
MalI	GATC	5 cut(s)	190, 471, 749, 1757, 1905
MboI	GATC	5 cut(s)	188, 469, 747, 1755, 1903
MboII	GAAGA	8 cut(s)	154, 157, 319, 623, 916, 1488, 1574, 2069
MfeI	CAATTG	2 cut(s)	1321, 2098
MhlI	GDGCHC	4 cut(s)	712, 943, 1331, 1526
MlsI	TGGCCA	1 cut(s)	654
MluNI	TGGCCA	1 cut(s)	654
MlyI	GAGTC	9 cut(s)	263, 269, 329, 727, 764, 1730, 1810, 1987, 2099
MmeI	TCCRAC	3 cut(s)	237, 834, 1779
Mox20I	TGGCCA	1 cut(s)	654
Mph1103I	ATGCAT	1 cut(s)	1360
MreI	CGCCGGCG	1 cut(s)	20
MroNI	GCCGGC	1 cut(s)	20
MscI	TGGCCA	1 cut(s)	654
MseI	TTAA	8 cut(s)	345, 1035, 1455, 1533, 1577, 1607, 1653, 2040
MslI	CAYNNNNRTG	3 cut(s)	1146, 1384, 1850
Msp20I	TGGCCA	1 cut(s)	654
MspI	CCGG	5 cut(s)	21, 48, 1789, 1901, 1927
MspR9I	CCNGG	6 cut(s)	397, 488, 1901, 1927, 2070, 2258
MunI	CAATTG	2 cut(s)	1321, 2098
Mva1269I	GAATGC	1 cut(s)	1358
MvaI	CCWGG	4 cut(s)	397, 488, 2070, 2258
MwoI	GCNNNNNNNGC	5 cut(s)	687, 1250, 1259, 1364, 1565
NaeI	GCCGGC	1 cut(s)	22
NciI	CCSGG	2 cut(s)	1901, 1927
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	5 cut(s)	188, 469, 747, 1755, 1903
NgoMIV	GCCGGC	1 cut(s)	20
NheI	GCTAGC	2 cut(s)	2063, 2138
NlaIII	CATG	8 cut(s)	109, 508, 585, 727, 1312, 1366, 1973, 2178
NlaIV	GGNNCC	5 cut(s)	46, 137, 796, 835, 885
NmeAIII	GCCGAG	1 cut(s)	277
NmuCI	GTSAC	3 cut(s)	332, 418, 923
NotI	GCGGCCGC	1 cut(s)	270
NsbI	TGCGCA	1 cut(s)	1028
NsiI	ATGCAT	1 cut(s)	1360
NspI	RCATGY	2 cut(s)	508, 1973
PaeR7I	CTCGAG	1 cut(s)	1818
PasI	CCCWGGG	1 cut(s)	2069
PciI	ACATGT	1 cut(s)	504
PcsI	WCGNNNNNNNCGW	1 cut(s)	703
PctI	GAATGC	1 cut(s)	1358
PdiI	GCCGGC	1 cut(s)	22
PfeI	GAWTC	7 cut(s)	440, 976, 1214, 1312, 1802, 1878, 1999
PflMI	CCANNNNNTGG	1 cut(s)	729
PinAI	ACCGGT	2 cut(s)	47, 1788
PleI	GAGTC	9 cut(s)	262, 268, 329, 727, 764, 1730, 1810, 1986, 2098
PpsI	GAGTC	9 cut(s)	262, 268, 329, 727, 764, 1730, 1810, 1986, 2098
PpuMI	RGGWCCY	1 cut(s)	884
PscI	ACATGT	1 cut(s)	504
Psp5II	RGGWCCY	1 cut(s)	884
Psp6I	CCWGG	4 cut(s)	395, 486, 2068, 2256
PspFI	CCCAGC	1 cut(s)	2291
PspGI	CCWGG	4 cut(s)	395, 486, 2068, 2256
PspN4I	GGNNCC	5 cut(s)	46, 137, 796, 835, 885
PspPI	GGNCC	3 cut(s)	312, 884, 1087
PspPPI	RGGWCCY	1 cut(s)	884
PspXI	VCTCGAGB	1 cut(s)	1818
PstI	CTGCAG	1 cut(s)	1744
PstNI	CAGNNNCTG	1 cut(s)	437
RsaI	GTAC	8 cut(s)	34, 46, 866, 1203, 1221, 1266, 1287, 1955
RsaNI	GTAC	8 cut(s)	33, 45, 865, 1202, 1220, 1265, 1286, 1954
RseI	CAYNNNNRTG	3 cut(s)	1146, 1384, 1850
SaqAI	TTAA	8 cut(s)	345, 1035, 1455, 1533, 1577, 1607, 1653, 2040
Sau3AI	GATC	5 cut(s)	188, 469, 747, 1755, 1903
Sau96I	GGNCC	3 cut(s)	312, 884, 1087
SchI	GAGTC	9 cut(s)	263, 269, 329, 727, 764, 1730, 1810, 1987, 2099
ScrFI	CCNGG	6 cut(s)	397, 488, 1901, 1927, 2070, 2258
SduI	GDGCHC	4 cut(s)	712, 943, 1331, 1526
SfaNI	GCATC	5 cut(s)	437, 628, 657, 1345, 1612
SfcI	CTRYAG	1 cut(s)	1740
Sfr274I	CTCGAG	1 cut(s)	1818
SgrAI	CRCCGGYG	1 cut(s)	20
SinI	GGWCC	2 cut(s)	312, 884
SlaI	CTCGAG	1 cut(s)	1818
SmiMI	CAYNNNNRTG	3 cut(s)	1146, 1384, 1850
SmlI	CTYRAG	3 cut(s)	113, 350, 1818
SmoI	CTYRAG	3 cut(s)	113, 350, 1818
SpeI	ACTAGT	1 cut(s)	1480
SsiI	CCGC	9 cut(s)	18, 24, 27, 269, 273, 393, 1417, 1548, 2317
SspMI	CTAG	5 cut(s)	737, 1280, 1481, 2064, 2139
StyD4I	CCNGG	6 cut(s)	395, 486, 1899, 1925, 2068, 2256
StyI	CCWWGG	3 cut(s)	603, 649, 887
TaaI	ACNGT	6 cut(s)	824, 852, 869, 1001, 1199, 1596
TaiI	ACGT	6 cut(s)	1013, 1024, 1408, 1604, 2112, 2192
TaqI	TCGA	5 cut(s)	706, 943, 1146, 1819, 2192
TatI	WGTACW	4 cut(s)	1219, 1264, 1285, 1953
TauI	GCSGC	7 cut(s)	20, 27, 272, 275, 395, 1419, 1551
TfiI	GAWTC	7 cut(s)	440, 976, 1214, 1312, 1802, 1878, 1999
Tru1I	TTAA	8 cut(s)	345, 1035, 1455, 1533, 1577, 1607, 1653, 2040
Tru9I	TTAA	8 cut(s)	345, 1035, 1455, 1533, 1577, 1607, 1653, 2040
TscAI	CASTG	4 cut(s)	829, 1558, 1749, 2011
TseFI	GTSAC	3 cut(s)	332, 418, 923
TseI	GCWGC	8 cut(s)	96, 243, 586, 678, 1413, 1514, 2012, 2207
Tsp45I	GTSAC	3 cut(s)	332, 418, 923
TspDTI	ATGAA	8 cut(s)	315, 528, 624, 1074, 1351, 1425, 1662, 2132
TspGWI	ACGGA	1 cut(s)	304
TspRI	CASTG	4 cut(s)	829, 1558, 1749, 2011
Van91I	CCANNNNNTGG	1 cut(s)	729
VneI	GTGCAC	2 cut(s)	1327, 1522
VpaK11BI	GGWCC	2 cut(s)	312, 884
XapI	RAATTY	4 cut(s)	523, 1636, 2264, 2306
XbaI	TCTAGA	1 cut(s)	736
XceI	RCATGY	2 cut(s)	508, 1973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	827
XhoI	CTCGAG	1 cut(s)	1818
XmiI	GTMKAC	1 cut(s)	768
XspI	CTAG	5 cut(s)	737, 1280, 1481, 2064, 2139
Zsp2I	ATGCAT	1 cut(s)	1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.