Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

27127803 .. 27133312

Gene Structure 5510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G012140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGGGTTTCAGTCCTGCGGGCGGCGGCGGTGGCGGTGGTACGAGCAATGGTACCGGGAATAATAGCACCAGTAATATTAATAATAATAGTAATAATAGTAGCTGCTGTAACATGAGCCTCAAGTGTAGGTGTAAATGGAGGTGCCTGATGTCGTCGGGGTTCGTTTTCTTCTTCGGCTGTTTTGTGCTGTTCGGATCAGTCGCTACGATTTATGTGTGGTTTGCTTTCACGCCGTATTATTACGCTCGCAGCACGGCCGAGTCGTCGTCGTCGGCCGCCGTGCTTGGGTGTCAGGAGGACAATGAAGGTTCTTGGTCCGTTGGTGTTTTCTTCGGTGACTCTCCCTTTAATCTCAAGCCCATTGAAGCTGTGAATGTATGGAGAGACAAGAGTGCCGCCTGGCCTGTGGCAAACCCTGTTGTGACTTGTGCATCAGTTTCTGAATCTGGTTTCCCAAGTAATTTTGTTGCTGATCCTTTCCTTTATGTCCAGGGAGATACTTTGTACATGTTCTATGAAACCAAAAATTCAATCACTATGCAAGGAGATATTGGGGTTTCAAAAAGCTCTGATAAAGGAGCAACATGGCAGCAATTAGGCATTGCCTTGGATGAAGAGTGGCATCTCTCTTATCCATATGTCTTTCACTACCTTGGCCATATATATATGATGCCTGAAAGCAGCACGAATGGCGAAGTTCGTCTCTATCGAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAAAAGGTGATCTTGAAAAAGCCTCTTGTAGACTCATTCCTTATCAATTATGATGGAGCCTATTGGCTTTTCGGTTCAGACCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAACCACACAAGAAGAACCCTATATATAATGGTGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTTTACAACGGGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGGAGACGTGTGCGCACCTTTAAGGTGGAAGTTCTTACCAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTTCCTGAGCCAAATAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACTGGAGGGTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACACAGGTTTATTGTTGGTAGTGCTTCAGTTGCCATTGTCGCTGTACTTGTTATATTACTAGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCCCCCAATTGGTGCACTCACAACTCGGGTAAGAGAAGTGATGCATTCATGGCTTGTGGAAGGTCATATCTGTGTTCGTCCAAACTGAGACGTTTTTGCAGCCGCTTGAACAGAGCAGTTTCATTCCTCAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCATTAAAAGGTCATTACTCACAGTTCACGTTATTAACAATGACTTATGATGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACACTATTCCAGATGTTCATCGGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGAATACCTCCTGAAGCGAGTGATTTTGACTCTGCAGTGCCAGTTAGGATCAGAGTAGAGAAACAGAACTCCCTGAATAACCGGTTCAAGTTGGATTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACCTGCAATGATATTGAGAGAGGATTCAGGATATGGCGTCAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTCATTGATGGAAGTCCATTGAAGTACAGAGGTGAGAAACATGCTCGGAGTCATAGAGGCTATAATATGATTCTCACTGGGGCAGCTTTCCTTGATAGCCAAGTAGCTTTTAAGAGGTATTGGAGTGAAGAAGCTAGCCCAGGGAGGGACTTTGTGGACAAGTCTTTCAATTGCGAGGACGTGCTCATGAATTACCTGTATGCAAATGCTAGCTCATCTCAGAATGTGGAGTATGTGAGGCCAGCATGGGCGATAGATACGTCGAAGTTATCTGGTGCTGCTATTAGCCGAAATACCCAAGTTCACTACAACAAAAGGAGCAACTGCCTGGTGAAATTTTCTGAAATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

780

Amino Acids

87.4

Weight (kDa)

9.0

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	97 - 400	1.3e-178	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	534 - 769	2.1e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1031
Acc36I	ACCTGC	1 cut(s)	1868
Acc65I	GGTACC	1 cut(s)	50
AccB1I	GGYRCC	3 cut(s)	50, 141, 836
AccB7I	CCANNNNNTGG	1 cut(s)	732
AccI	GTMKAC	1 cut(s)	771
AclWI	GGATC	4 cut(s)	202, 467, 1766, 1914
AcoI	YGGCCR	3 cut(s)	255, 273, 655
AcsI	RAATTY	4 cut(s)	526, 1639, 2267, 2309
AcuI	CTGAAG	2 cut(s)	1233, 1743
AcyI	GRCGYC	1 cut(s)	1894
AfaI	GTAC	9 cut(s)	40, 52, 506, 869, 1206, 1224, 1269, 1290, 1958
AfiI	CCNNNNNNNGG	7 cut(s)	20, 285, 732, 1109, 1326, 1583, 2077
AflIII	ACRYGT	2 cut(s)	507, 1024
AgeI	ACCGGT	1 cut(s)	1791
AhlI	ACTAGT	1 cut(s)	1483
AjiI	CACGTC	2 cut(s)	1025, 2113
AjnI	CCWGG	4 cut(s)	398, 489, 2071, 2259
AjuI	GAANNNNNNNTTGG	2 cut(s)	839, 871
AloI	GAACNNNNNNTCC	2 cut(s)	1470, 1502
Alw21I	GWGCWC	3 cut(s)	1334, 1529, 2118
Alw26I	GTCTC	6 cut(s)	378, 707, 1015, 1191, 1399, 1637
Alw44I	GTGCAC	2 cut(s)	1330, 1525
AlwI	GGATC	4 cut(s)	202, 467, 1766, 1914
AlwNI	CAGNNNCTG	1 cut(s)	440
Ama87I	CYCGRG	2 cut(s)	1342, 1821
AoxI	GGCC	6 cut(s)	255, 273, 401, 655, 1090, 2171
ApaLI	GTGCAC	2 cut(s)	1330, 1525
ApeKI	GCWGC	8 cut(s)	102, 249, 589, 681, 1416, 1517, 2015, 2210
ApoI	RAATTY	4 cut(s)	526, 1639, 2267, 2309
ArsI	GACNNNNNNTTYG	2 cut(s)	920, 952
AseI	ATTAAT	1 cut(s)	78
AsiGI	ACCGGT	1 cut(s)	1791
Asp718I	GGTACC	1 cut(s)	50
AspLEI	GCGC	2 cut(s)	1032, 2301
AspS9I	GGNCC	3 cut(s)	315, 887, 1090
AsuC2I	CCSGG	3 cut(s)	55, 1904, 1930
AsuHPI	GGTGA	5 cut(s)	347, 760, 938, 1976, 2275
AsuNHI	GCTAGC	2 cut(s)	2066, 2141
AvaI	CYCGRG	2 cut(s)	1342, 1821
AvaII	GGWCC	2 cut(s)	315, 887
BaeGI	GKGCMC	2 cut(s)	1334, 1529
BalI	TGGCCA	1 cut(s)	657
BanI	GGYRCC	3 cut(s)	50, 141, 836
BanII	GRGCYC	2 cut(s)	715, 946
BbsI	GAAGAC	1 cut(s)	1486
Bbv12I	GWGCWC	3 cut(s)	1334, 1529, 2118
BbvI	GCAGC	8 cut(s)	89, 261, 601, 693, 1428, 1529, 2027, 2197
BccI	CCATC	6 cut(s)	788, 1149, 1187, 1934, 2309, 2321
BceAI	ACGGC	3 cut(s)	217, 263, 270
BciT130I	CCWGG	4 cut(s)	400, 491, 2073, 2261
BcnI	CCSGG	3 cut(s)	55, 1904, 1930
BcoDI	GTCTC	6 cut(s)	378, 707, 1015, 1191, 1399, 1637
BcuI	ACTAGT	1 cut(s)	1483
BfaI	CTAG	5 cut(s)	740, 1283, 1484, 2067, 2142
BfmI	CTRYAG	1 cut(s)	1743
BfuAI	ACCTGC	1 cut(s)	1868
Bme1390I	CCNGG	7 cut(s)	55, 400, 491, 1904, 1930, 2073, 2261
Bme18I	GGWCC	2 cut(s)	315, 887
BmeT110I	CYCGRG	2 cut(s)	1342, 1821
BmgBI	CACGTC	2 cut(s)	1025, 2113
BmgT120I	GGNCC	3 cut(s)	315, 887, 1090
BmiI	GGNNCC	5 cut(s)	52, 143, 799, 838, 888
BmrFI	CCNGG	7 cut(s)	55, 400, 491, 1904, 1930, 2073, 2261
BmrI	ACTGGG	1 cut(s)	2019
BmsI	GCATC	5 cut(s)	440, 631, 660, 1348, 1615
BmtI	GCTAGC	2 cut(s)	2070, 2145
BmuI	ACTGGG	1 cut(s)	2019
BpiI	GAAGAC	1 cut(s)	1486
BpmI	CTGGAG	3 cut(s)	1191, 1233, 1853
Bpu10I	CCTNAGC	1 cut(s)	1098
BpuEI	CTTGAG	2 cut(s)	104, 338
BpuMI	CCSGG	3 cut(s)	55, 1904, 1930
BsaBI	GATNNNNATC	1 cut(s)	1675
BsaHI	GRCGYC	1 cut(s)	1894
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	7 cut(s)	490, 606, 652, 890, 1928, 2071, 2072
BsaWI	WCCGGW	1 cut(s)	1791
BsaXI	ACNNNNNCTCC	4 cut(s)	1188, 1206, 1218, 1236
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 285, 732, 1109, 1326, 1583, 2077
Bse118I	RCCGGY	1 cut(s)	1791
Bse1I	ACTGG	4 cut(s)	69, 1174, 1751, 2014
Bse3DI	GCAATG	5 cut(s)	52, 600, 737, 1123, 1870
Bse8I	GATNNNNATC	1 cut(s)	1675
BseBI	CCWGG	4 cut(s)	400, 491, 2073, 2261
BseDI	CCNNGG	7 cut(s)	490, 606, 652, 890, 1928, 2071, 2072
BseGI	GGATG	4 cut(s)	616, 1198, 2332, 2341
BseJI	GATNNNNATC	1 cut(s)	1675
BseLI	CCNNNNNNNGG	7 cut(s)	20, 285, 732, 1109, 1326, 1583, 2077
BseMI	GCAATG	5 cut(s)	52, 600, 737, 1123, 1870
BseMII	CTCAG	5 cut(s)	730, 1089, 1394, 1459, 2165
BseNI	ACTGG	4 cut(s)	69, 1174, 1751, 2014
BseSI	GKGCMC	2 cut(s)	1334, 1529
BseX3I	CGGCCG	2 cut(s)	255, 273
BseXI	GCAGC	8 cut(s)	89, 261, 601, 693, 1428, 1529, 2027, 2197
BseYI	CCCAGC	1 cut(s)	2294
BsgI	GTGCAG	1 cut(s)	1581
Bsh1285I	CGRYCG	2 cut(s)	258, 276
BshFI	GGCC	6 cut(s)	257, 275, 403, 657, 1092, 2173
BshNI	GGYRCC	3 cut(s)	50, 141, 836
BshTI	ACCGGT	1 cut(s)	1791
BsiEI	CGRYCG	2 cut(s)	258, 276
BsiHKAI	GWGCWC	3 cut(s)	1334, 1529, 2118
BsiHKCI	CYCGRG	2 cut(s)	1342, 1821
BsiSI	CCGG	4 cut(s)	54, 1792, 1904, 1930
BslFI	GGGAC	2 cut(s)	1067, 2093
BslI	CCNNNNNNNGG	7 cut(s)	20, 285, 732, 1109, 1326, 1583, 2077
BsmAI	GTCTC	6 cut(s)	378, 707, 1015, 1191, 1399, 1637
BsmBI	CGTCTC	4 cut(s)	707, 1015, 1399, 1637
BsmFI	GGGAC	2 cut(s)	1067, 2093
BsmI	GAATGC	1 cut(s)	1361
BsnI	GGCC	6 cut(s)	257, 275, 403, 657, 1092, 2173
Bso31I	GGTCTC	1 cut(s)	1191
BsoBI	CYCGRG	2 cut(s)	1342, 1821
Bsp1286I	GDGCHC	5 cut(s)	715, 946, 1334, 1529, 2118
Bsp1407I	TGTACA	2 cut(s)	504, 1222
Bsp143I	GATC	5 cut(s)	194, 472, 750, 1758, 1906
BspANI	GGCC	6 cut(s)	257, 275, 403, 657, 1092, 2173
BspCNI	CTCAG	5 cut(s)	729, 1090, 1395, 1458, 2164
BspHI	TCATGA	1 cut(s)	2118
BspLI	GGNNCC	5 cut(s)	52, 143, 799, 838, 888
BspMAI	CTGCAG	1 cut(s)	1747
BspMI	ACCTGC	1 cut(s)	1868
BspOI	GCTAGC	2 cut(s)	2070, 2145
BspPI	GGATC	4 cut(s)	202, 467, 1766, 1914
BspT107I	GGYRCC	3 cut(s)	50, 141, 836
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	5 cut(s)	52, 600, 737, 1123, 1870
BsrFI	RCCGGY	1 cut(s)	1791
BsrGI	TGTACA	2 cut(s)	504, 1222
BsrI	ACTGG	4 cut(s)	69, 1174, 1751, 2014
BssAI	RCCGGY	1 cut(s)	1791
BssECI	CCNNGG	7 cut(s)	490, 606, 652, 890, 1928, 2071, 2072
BssMI	GATC	5 cut(s)	194, 472, 750, 1758, 1906
BssNI	GRCGYC	1 cut(s)	1894
BssT1I	CCWWGG	3 cut(s)	606, 652, 890
Bst2UI	CCWGG	4 cut(s)	400, 491, 2073, 2261
Bst4CI	ACNGT	6 cut(s)	827, 855, 872, 1004, 1202, 1599
Bst6I	CTCTTC	1 cut(s)	609
BstACI	GRCGYC	1 cut(s)	1894
BstAUI	TGTACA	2 cut(s)	504, 1222
BstC8I	GCNNGC	6 cut(s)	19, 247, 878, 2068, 2143, 2175
BstDEI	CTNAG	5 cut(s)	716, 1098, 1403, 1445, 2151
BstF5I	GGATG	4 cut(s)	616, 1198, 2332, 2341
BstHHI	GCGC	2 cut(s)	1032, 2301
BstKTI	GATC	5 cut(s)	197, 475, 753, 1761, 1909
BstMAI	GTCTC	6 cut(s)	378, 707, 1015, 1191, 1399, 1637
BstMBI	GATC	5 cut(s)	194, 472, 750, 1758, 1906
BstMCI	CGRYCG	2 cut(s)	258, 276
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 690, 1253, 1262, 1367, 1568
BstNI	CCWGG	4 cut(s)	400, 491, 2073, 2261
BstNSI	RCATGY	2 cut(s)	511, 1976
BstSCI	CCNGG	7 cut(s)	53, 398, 489, 1902, 1928, 2071, 2259
BstSFI	CTRYAG	1 cut(s)	1743
BstSLI	GKGCMC	2 cut(s)	1334, 1529
BstV1I	GCAGC	8 cut(s)	89, 261, 601, 693, 1428, 1529, 2027, 2197
BstV2I	GAAGAC	1 cut(s)	1486
BstZI	CGGCCG	2 cut(s)	255, 273
BsuRI	GGCC	6 cut(s)	257, 275, 403, 657, 1092, 2173
BtrI	CACGTC	2 cut(s)	1025, 2113
BtsCI	GGATG	4 cut(s)	616, 1198, 2332, 2341
BtsI	GCAGTG	2 cut(s)	1561, 1752
BtsIMutI	CAGTG	4 cut(s)	832, 1561, 1752, 2007
BveI	ACCTGC	1 cut(s)	1868
Cac8I	GCNNGC	6 cut(s)	19, 247, 878, 2068, 2143, 2175
CaiI	CAGNNNCTG	1 cut(s)	440
CciI	TCATGA	1 cut(s)	2118
CfoI	GCGC	2 cut(s)	1032, 2301
Cfr10I	RCCGGY	1 cut(s)	1791
Cfr13I	GGNCC	3 cut(s)	315, 887, 1090
CseI	GACGC	1 cut(s)	1883
Csp6I	GTAC	9 cut(s)	39, 51, 505, 868, 1205, 1223, 1268, 1289, 1957
CspAI	ACCGGT	1 cut(s)	1791
CviAII	CATG	9 cut(s)	112, 508, 585, 727, 1312, 1366, 1973, 2119, 2178
CviQI	GTAC	9 cut(s)	39, 51, 505, 868, 1205, 1223, 1268, 1289, 1957
DdeI	CTNAG	5 cut(s)	716, 1098, 1403, 1445, 2151
DpnI	GATC	5 cut(s)	196, 474, 752, 1760, 1908
DpnII	GATC	5 cut(s)	194, 472, 750, 1758, 1906
EaeI	YGGCCR	3 cut(s)	255, 273, 655
EagI	CGGCCG	2 cut(s)	255, 273
Eam1104I	CTCTTC	1 cut(s)	609
EarI	CTCTTC	1 cut(s)	609
EciI	GGCGGA	1 cut(s)	2335
EclXI	CGGCCG	2 cut(s)	255, 273
Eco130I	CCWWGG	3 cut(s)	606, 652, 890
Eco24I	GRGCYC	2 cut(s)	715, 946
Eco31I	GGTCTC	1 cut(s)	1191
Eco47I	GGWCC	2 cut(s)	315, 887
Eco52I	CGGCCG	2 cut(s)	255, 273
Eco57I	CTGAAG	2 cut(s)	1233, 1743
Eco88I	CYCGRG	2 cut(s)	1342, 1821
EcoO109I	RGGNCCY	1 cut(s)	887
EcoRII	CCWGG	4 cut(s)	398, 489, 2071, 2259
EcoT14I	CCWWGG	3 cut(s)	606, 652, 890
EcoT22I	ATGCAT	1 cut(s)	1363
EcoT38I	GRGCYC	2 cut(s)	715, 946
ErhI	CCWWGG	3 cut(s)	606, 652, 890
Esp3I	CGTCTC	4 cut(s)	707, 1015, 1399, 1637
FaeI	CATG	9 cut(s)	115, 511, 588, 730, 1315, 1369, 1976, 2122, 2181
FalI	AAGNNNNNCTT	2 cut(s)	737, 769
FaqI	GGGAC	2 cut(s)	1067, 2093
FatI	CATG	9 cut(s)	111, 507, 584, 726, 1311, 1365, 1972, 2118, 2177
FauI	CCCGC	1 cut(s)	10
FauNDI	CATATG	1 cut(s)	637
FblI	GTMKAC	1 cut(s)	771
FokI	GGATG	3 cut(s)	623, 1205, 2339
FriOI	GRGCYC	2 cut(s)	715, 946
FspAI	RTGCGCAY	1 cut(s)	1031
FspBI	CTAG	5 cut(s)	740, 1283, 1484, 2067, 2142
FspI	TGCGCA	1 cut(s)	1031
GlaI	GCGC	2 cut(s)	1031, 2300
GsaI	CCCAGC	1 cut(s)	2298
GsuI	CTGGAG	3 cut(s)	1191, 1233, 1853
HaeIII	GGCC	6 cut(s)	257, 275, 403, 657, 1092, 2173
HapII	CCGG	4 cut(s)	54, 1792, 1904, 1930
HgaI	GACGC	1 cut(s)	1883
HhaI	GCGC	2 cut(s)	1032, 2301
Hin1I	GRCGYC	1 cut(s)	1894
Hin1II	CATG	9 cut(s)	115, 511, 588, 730, 1315, 1369, 1976, 2122, 2181
Hin6I	GCGC	2 cut(s)	1030, 2299
HinP1I	GCGC	2 cut(s)	1030, 2299
HincII	GTYRAC	1 cut(s)	1898
HindII	GTYRAC	1 cut(s)	1898
HindIII	AAGCTT	1 cut(s)	1569
HpaII	CCGG	4 cut(s)	54, 1792, 1904, 1930
HphI	GGTGA	5 cut(s)	347, 760, 938, 1976, 2275
Hpy188I	TCNGA	9 cut(s)	194, 442, 571, 820, 1448, 1763, 1980, 2154, 2275
Hpy99I	CGWCG	5 cut(s)	157, 268, 271, 274, 2197
HpyAV	CCTTC	5 cut(s)	299, 1103, 1218, 1371, 2317
HpyCH4III	ACNGT	6 cut(s)	827, 855, 872, 1004, 1202, 1599
HpyCH4IV	ACGT	6 cut(s)	1013, 1024, 1408, 1604, 2112, 2192
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 690, 1253, 1262, 1367, 1568
HpyF3I	CTNAG	5 cut(s)	716, 1098, 1403, 1445, 2151
HpySE526I	ACGT	6 cut(s)	1013, 1024, 1408, 1604, 2112, 2192
Hsp92I	GRCGYC	1 cut(s)	1894
Hsp92II	CATG	9 cut(s)	115, 511, 588, 730, 1315, 1369, 1976, 2122, 2181
HspAI	GCGC	2 cut(s)	1030, 2299
KpnI	GGTACC	1 cut(s)	54
Kzo9I	GATC	5 cut(s)	194, 472, 750, 1758, 1906
LmnI	GCTCC	5 cut(s)	578, 797, 1298, 1834, 2250
Lsp1109I	GCAGC	8 cut(s)	89, 261, 601, 693, 1428, 1529, 2027, 2197
LweI	GCATC	5 cut(s)	440, 631, 660, 1348, 1615
MaeI	CTAG	5 cut(s)	740, 1283, 1484, 2067, 2142
MaeII	ACGT	6 cut(s)	1013, 1024, 1408, 1604, 2112, 2192
MaeIII	GTNAC	4 cut(s)	107, 335, 421, 926
MalI	GATC	5 cut(s)	196, 474, 752, 1760, 1908
MboI	GATC	5 cut(s)	194, 472, 750, 1758, 1906
MboII	GAAGA	8 cut(s)	160, 163, 322, 626, 919, 1491, 1577, 2072
MfeI	CAATTG	2 cut(s)	1324, 2101
MhlI	GDGCHC	5 cut(s)	715, 946, 1334, 1529, 2118
MlsI	TGGCCA	1 cut(s)	657
MluNI	TGGCCA	1 cut(s)	657
MlyI	GAGTC	7 cut(s)	269, 332, 730, 767, 1733, 1813, 1990
MmeI	TCCRAC	2 cut(s)	837, 1782
Mox20I	TGGCCA	1 cut(s)	657
Mph1103I	ATGCAT	1 cut(s)	1363
MscI	TGGCCA	1 cut(s)	657
MseI	TTAA	9 cut(s)	78, 348, 1038, 1458, 1536, 1580, 1610, 1656, 2043
MslI	CAYNNNNRTG	3 cut(s)	1149, 1387, 1853
Msp20I	TGGCCA	1 cut(s)	657
MspI	CCGG	4 cut(s)	54, 1792, 1904, 1930
MspR9I	CCNGG	7 cut(s)	55, 400, 491, 1904, 1930, 2073, 2261
MunI	CAATTG	2 cut(s)	1324, 2101
Mva1269I	GAATGC	1 cut(s)	1361
MvaI	CCWGG	4 cut(s)	400, 491, 2073, 2261
MwoI	GCNNNNNNNGC	6 cut(s)	30, 690, 1253, 1262, 1367, 1568
NciI	CCSGG	3 cut(s)	55, 1904, 1930
NdeI	CATATG	1 cut(s)	637
NdeII	GATC	5 cut(s)	194, 472, 750, 1758, 1906
NheI	GCTAGC	2 cut(s)	2066, 2141
NlaIII	CATG	9 cut(s)	115, 511, 588, 730, 1315, 1369, 1976, 2122, 2181
NlaIV	GGNNCC	5 cut(s)	52, 143, 799, 838, 888
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	3 cut(s)	335, 421, 926
NsbI	TGCGCA	1 cut(s)	1031
NsiI	ATGCAT	1 cut(s)	1363
NspI	RCATGY	2 cut(s)	511, 1976
PaeR7I	CTCGAG	1 cut(s)	1821
PagI	TCATGA	1 cut(s)	2118
PasI	CCCWGGG	1 cut(s)	2072
PciI	ACATGT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	2 cut(s)	260, 706
PctI	GAATGC	1 cut(s)	1361
PfeI	GAWTC	7 cut(s)	443, 979, 1217, 1315, 1805, 1881, 2002
PflMI	CCANNNNNTGG	1 cut(s)	732
PinAI	ACCGGT	1 cut(s)	1791
PleI	GAGTC	7 cut(s)	268, 332, 730, 767, 1733, 1813, 1989
PpsI	GAGTC	7 cut(s)	268, 332, 730, 767, 1733, 1813, 1989
PpuMI	RGGWCCY	1 cut(s)	887
PscI	ACATGT	1 cut(s)	507
PshBI	ATTAAT	1 cut(s)	78
Psp5II	RGGWCCY	1 cut(s)	887
Psp6I	CCWGG	4 cut(s)	398, 489, 2071, 2259
PspFI	CCCAGC	1 cut(s)	2294
PspGI	CCWGG	4 cut(s)	398, 489, 2071, 2259
PspN4I	GGNNCC	5 cut(s)	52, 143, 799, 838, 888
PspPI	GGNCC	3 cut(s)	315, 887, 1090
PspPPI	RGGWCCY	1 cut(s)	887
PspXI	VCTCGAGB	1 cut(s)	1821
PstI	CTGCAG	1 cut(s)	1747
PstNI	CAGNNNCTG	1 cut(s)	440
RsaI	GTAC	9 cut(s)	40, 52, 506, 869, 1206, 1224, 1269, 1290, 1958
RsaNI	GTAC	9 cut(s)	39, 51, 505, 868, 1205, 1223, 1268, 1289, 1957
RseI	CAYNNNNRTG	3 cut(s)	1149, 1387, 1853
SaqAI	TTAA	9 cut(s)	78, 348, 1038, 1458, 1536, 1580, 1610, 1656, 2043
Sau3AI	GATC	5 cut(s)	194, 472, 750, 1758, 1906
Sau96I	GGNCC	3 cut(s)	315, 887, 1090
SchI	GAGTC	7 cut(s)	269, 332, 730, 767, 1733, 1813, 1990
ScrFI	CCNGG	7 cut(s)	55, 400, 491, 1904, 1930, 2073, 2261
SduI	GDGCHC	5 cut(s)	715, 946, 1334, 1529, 2118
SfaNI	GCATC	5 cut(s)	440, 631, 660, 1348, 1615
SfcI	CTRYAG	1 cut(s)	1743
Sfr274I	CTCGAG	1 cut(s)	1821
SinI	GGWCC	2 cut(s)	315, 887
SlaI	CTCGAG	1 cut(s)	1821
SmiMI	CAYNNNNRTG	3 cut(s)	1149, 1387, 1853
SmlI	CTYRAG	3 cut(s)	119, 353, 1821
SmoI	CTYRAG	3 cut(s)	119, 353, 1821
SpeI	ACTAGT	1 cut(s)	1483
SspI	AATATT	1 cut(s)	76
SspMI	CTAG	5 cut(s)	740, 1283, 1484, 2067, 2142
StyD4I	CCNGG	7 cut(s)	53, 398, 489, 1902, 1928, 2071, 2259
StyI	CCWWGG	3 cut(s)	606, 652, 890
TaaI	ACNGT	6 cut(s)	827, 855, 872, 1004, 1202, 1599
TaiI	ACGT	6 cut(s)	1016, 1027, 1411, 1607, 2115, 2195
TaqI	TCGA	5 cut(s)	709, 946, 1149, 1822, 2195
TatI	WGTACW	5 cut(s)	504, 1222, 1267, 1288, 1956
TauI	GCSGC	6 cut(s)	24, 27, 278, 398, 1422, 1554
TfiI	GAWTC	7 cut(s)	443, 979, 1217, 1315, 1805, 1881, 2002
Tru1I	TTAA	9 cut(s)	78, 348, 1038, 1458, 1536, 1580, 1610, 1656, 2043
Tru9I	TTAA	9 cut(s)	78, 348, 1038, 1458, 1536, 1580, 1610, 1656, 2043
TscAI	CASTG	4 cut(s)	832, 1561, 1752, 2014
TseFI	GTSAC	3 cut(s)	335, 421, 926
TseI	GCWGC	8 cut(s)	102, 249, 589, 681, 1416, 1517, 2015, 2210
Tsp45I	GTSAC	3 cut(s)	335, 421, 926
TspDTI	ATGAA	8 cut(s)	318, 531, 627, 1077, 1354, 1428, 1665, 2135
TspGWI	ACGGA	1 cut(s)	307
TspRI	CASTG	4 cut(s)	832, 1561, 1752, 2014
Van91I	CCANNNNNTGG	1 cut(s)	732
VneI	GTGCAC	2 cut(s)	1330, 1525
VpaK11BI	GGWCC	2 cut(s)	315, 887
VspI	ATTAAT	1 cut(s)	78
XapI	RAATTY	4 cut(s)	526, 1639, 2267, 2309
XbaI	TCTAGA	1 cut(s)	739
XceI	RCATGY	2 cut(s)	511, 1976
XcmI	CCANNNNNNNNNTGG	1 cut(s)	830
XhoI	CTCGAG	1 cut(s)	1821
XmiI	GTMKAC	1 cut(s)	771
XspI	CTAG	5 cut(s)	740, 1283, 1484, 2067, 2142
Zsp2I	ATGCAT	1 cut(s)	1363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.