Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Forward (+)

28277730 .. 28283984

Gene Structure 6255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG150300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGTTCTATGAAACCAAAAATTCAATCACCATGCAAGGAGATATTGGGGTTTCAAAAAGCTCTGATAAAGGAGCAACATGGCAGCAATTAGGCATTGCCTTGGATGAAGAGTGGCATCTCTCTTATCCATATGTCTTTCACTACCTTGGCCATATATATATGATGCCTGAAAGCAGCACGAATGGCGAAGTTCGTCTCTATCGAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAAAAGGTGATATTGAAAAAGCCTCTTGTCGACTCATTCCTTATCAATTATGATGGAGCCTATTGGCTTTTCGGTTCAGACCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAGCCACACAAGAAAAACCCTATATATAATGGTGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTTTACAACGGGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGGAGACGTGTGCGCACCTTTAAGGTGGAAGTTCTTACCAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTTCCTGAGCCAAATAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACTGGAGGGTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACACAGGTTTATTGTTGGTAGTGCTTCAGTTGCCATTGTCGCTATACTTGTTATATTACTAGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCCCCCAATTGGTGCACTCACAACTCGGGTAAGAGAAGTGATGCATTCATGGCTTGTGAAAGGTCATATCTGTGTTCGTCCAAACTGAGACGTTTTTGCAGCCGCTTGAACAGAGCAGTTTCATTCCTCAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCATTAAAAGGTCATTACTCACAGTTCACATTATTAACAATGACTTATGATGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACACTATTCTAGATGTTCATCGGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGTATACCTCCTGAAGCGAGTGATTTTGACTCTGCAGTGCCAGTTAGGATCAGAGTAGAGAAACAGAACTCCCTGAATAACCGGTTCAAGTTGGATTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACCTGCAATGATATTGAGAGAGGATTCAGGATATGGCGTCAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTCATTGATGGAAGTCCATTGAAGTACAGAGGTGAGAAACATGCTCGGAGTCATAGAGGCTATAATATGATTCTCACTGGGGCAGCTTTCCTTGATAGCCAAGTAGCTTTTAAGAGGTATTGGAGTGAAGAAGCTAGCCCAGGGAGGGACTTTGTGGACAAGTCTTTCAATTGCGAGGATGTGCTTATGAATTACCTGTATGCAAATGCTAGCTCATCTCAGAATGTGGAGTATGTGAGGCCAGCATGGGCGATAGATACGTCGAAGTTATCTGGTGCTGCTATTAGCCGAAATACCCAAGTTCACTACAACAAGAGGAGCAACTGCCTGGTGAAATTTTCTGAAATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

611

Amino Acids

69.53

Weight (kDa)

9.25

Isoelectric Point (pI)

40.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	1 - 231	3.9e-130	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	365 - 600	1.3e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	524
Acc36I	ACCTGC	1 cut(s)	1361
AccB1I	GGYRCC	1 cut(s)	329
AccB7I	CCANNNNNTGG	1 cut(s)	225
AccI	GTMKAC	2 cut(s)	264, 1207
AciI	CCGC	3 cut(s)	913, 1044, 1813
AclWI	GGATC	2 cut(s)	1259, 1407
AcoI	YGGCCR	1 cut(s)	148
AcsI	RAATTY	4 cut(s)	19, 1132, 1760, 1802
AcuI	CTGAAG	2 cut(s)	726, 1236
AcyI	GRCGYC	1 cut(s)	1387
AfaI	GTAC	5 cut(s)	362, 699, 717, 783, 1451
AfiI	CCNNNNNNNGG	5 cut(s)	225, 602, 819, 1076, 1570
AflIII	ACRYGT	1 cut(s)	517
AgeI	ACCGGT	1 cut(s)	1284
AgsI	TTSAA	9 cut(s)	24, 54, 250, 572, 919, 1138, 1291, 1447, 1594
AhlI	ACTAGT	1 cut(s)	976
AjiI	CACGTC	1 cut(s)	518
AjnI	CCWGG	2 cut(s)	1564, 1752
AjuI	GAANNNNNNNTTGG	2 cut(s)	332, 364
AloI	GAACNNNNNNTCC	2 cut(s)	963, 995
Alw21I	GWGCWC	2 cut(s)	827, 1022
Alw26I	GTCTC	5 cut(s)	200, 508, 684, 892, 1130
Alw44I	GTGCAC	2 cut(s)	823, 1018
AlwI	GGATC	2 cut(s)	1259, 1407
Ama87I	CYCGRG	2 cut(s)	835, 1314
AoxI	GGCC	3 cut(s)	148, 583, 1664
ApaLI	GTGCAC	2 cut(s)	823, 1018
ApeKI	GCWGC	6 cut(s)	82, 174, 909, 1010, 1508, 1703
ApoI	RAATTY	4 cut(s)	19, 1132, 1760, 1802
ArsI	GACNNNNNNTTYG	2 cut(s)	413, 445
AsiGI	ACCGGT	1 cut(s)	1284
AspLEI	GCGC	2 cut(s)	525, 1794
AspS9I	GGNCC	2 cut(s)	380, 583
AsuC2I	CCSGG	2 cut(s)	1397, 1423
AsuHPI	GGTGA	5 cut(s)	19, 253, 431, 1469, 1768
AsuNHI	GCTAGC	2 cut(s)	1559, 1634
AvaI	CYCGRG	2 cut(s)	835, 1314
AvaII	GGWCC	1 cut(s)	380
BaeGI	GKGCMC	2 cut(s)	827, 1022
BalI	TGGCCA	1 cut(s)	150
BanI	GGYRCC	1 cut(s)	329
BanII	GRGCYC	2 cut(s)	208, 439
BbsI	GAAGAC	1 cut(s)	979
Bbv12I	GWGCWC	2 cut(s)	827, 1022
BbvI	GCAGC	6 cut(s)	94, 186, 921, 1022, 1520, 1690
BccI	CCATC	6 cut(s)	281, 642, 680, 1427, 1802, 1814
BciT130I	CCWGG	2 cut(s)	1566, 1754
BcnI	CCSGG	2 cut(s)	1397, 1423
BcoDI	GTCTC	5 cut(s)	200, 508, 684, 892, 1130
BcuI	ACTAGT	1 cut(s)	976
BfaI	CTAG	6 cut(s)	233, 776, 977, 1161, 1560, 1635
BfmI	CTRYAG	1 cut(s)	1236
BfuAI	ACCTGC	1 cut(s)	1361
BisI	GCNGC	8 cut(s)	83, 175, 910, 913, 1011, 1045, 1509, 1704
BlsI	GCNGC	8 cut(s)	84, 176, 911, 914, 1012, 1046, 1510, 1705
Bme1390I	CCNGG	4 cut(s)	1397, 1423, 1566, 1754
Bme18I	GGWCC	1 cut(s)	380
BmeT110I	CYCGRG	2 cut(s)	835, 1314
BmgBI	CACGTC	1 cut(s)	518
BmgT120I	GGNCC	2 cut(s)	380, 583
BmiI	GGNNCC	3 cut(s)	292, 331, 381
BmrFI	CCNGG	4 cut(s)	1397, 1423, 1566, 1754
BmrI	ACTGGG	1 cut(s)	1512
BmsI	GCATC	4 cut(s)	124, 153, 841, 1108
BmtI	GCTAGC	2 cut(s)	1563, 1638
BmuI	ACTGGG	1 cut(s)	1512
BpiI	GAAGAC	1 cut(s)	979
BpmI	CTGGAG	3 cut(s)	684, 726, 1346
Bpu10I	CCTNAGC	1 cut(s)	591
BpuMI	CCSGG	2 cut(s)	1397, 1423
BsaBI	GATNNNNATC	1 cut(s)	1168
BsaHI	GRCGYC	1 cut(s)	1387
BsaI	GGTCTC	1 cut(s)	684
BsaJI	CCNNGG	6 cut(s)	99, 145, 383, 1421, 1564, 1565
BsaWI	WCCGGW	1 cut(s)	1284
BsaXI	ACNNNNNCTCC	4 cut(s)	681, 699, 711, 729
Bsc4I	CCNNNNNNNGG	5 cut(s)	225, 602, 819, 1076, 1570
Bse118I	RCCGGY	1 cut(s)	1284
Bse1I	ACTGG	3 cut(s)	667, 1244, 1507
Bse3DI	GCAATG	4 cut(s)	93, 230, 616, 1363
Bse8I	GATNNNNATC	1 cut(s)	1168
BseBI	CCWGG	2 cut(s)	1566, 1754
BseDI	CCNNGG	6 cut(s)	99, 145, 383, 1421, 1564, 1565
BseGI	GGATG	5 cut(s)	109, 691, 1609, 1825, 1834
BseJI	GATNNNNATC	1 cut(s)	1168
BseLI	CCNNNNNNNGG	5 cut(s)	225, 602, 819, 1076, 1570
BseMI	GCAATG	4 cut(s)	93, 230, 616, 1363
BseMII	CTCAG	5 cut(s)	223, 582, 887, 952, 1658
BseNI	ACTGG	3 cut(s)	667, 1244, 1507
BseRI	GAGGAG	1 cut(s)	1756
BseSI	GKGCMC	2 cut(s)	827, 1022
BseXI	GCAGC	6 cut(s)	94, 186, 921, 1022, 1520, 1690
BseYI	CCCAGC	1 cut(s)	1787
BsgI	GTGCAG	1 cut(s)	1074
BshFI	GGCC	3 cut(s)	150, 585, 1666
BshNI	GGYRCC	1 cut(s)	329
BshTI	ACCGGT	1 cut(s)	1284
BsiHKAI	GWGCWC	2 cut(s)	827, 1022
BsiHKCI	CYCGRG	2 cut(s)	835, 1314
BsiSI	CCGG	3 cut(s)	1285, 1397, 1423
BslFI	GGGAC	2 cut(s)	560, 1586
BslI	CCNNNNNNNGG	5 cut(s)	225, 602, 819, 1076, 1570
BsmAI	GTCTC	5 cut(s)	200, 508, 684, 892, 1130
BsmBI	CGTCTC	4 cut(s)	200, 508, 892, 1130
BsmFI	GGGAC	2 cut(s)	560, 1586
BsmI	GAATGC	1 cut(s)	854
BsnI	GGCC	3 cut(s)	150, 585, 1666
Bso31I	GGTCTC	1 cut(s)	684
BsoBI	CYCGRG	2 cut(s)	835, 1314
Bsp1286I	GDGCHC	4 cut(s)	208, 439, 827, 1022
Bsp1407I	TGTACA	1 cut(s)	715
Bsp143I	GATC	2 cut(s)	1251, 1399
BspACI	CCGC	3 cut(s)	913, 1044, 1813
BspANI	GGCC	3 cut(s)	150, 585, 1666
BspCNI	CTCAG	5 cut(s)	222, 583, 888, 951, 1657
BspLI	GGNNCC	3 cut(s)	292, 331, 381
BspMAI	CTGCAG	1 cut(s)	1240
BspMI	ACCTGC	1 cut(s)	1361
BspOI	GCTAGC	2 cut(s)	1563, 1638
BspPI	GGATC	2 cut(s)	1259, 1407
BspT107I	GGYRCC	1 cut(s)	329
BspTNI	GGTCTC	1 cut(s)	684
BsrDI	GCAATG	4 cut(s)	93, 230, 616, 1363
BsrFI	RCCGGY	1 cut(s)	1284
BsrGI	TGTACA	1 cut(s)	715
BsrI	ACTGG	3 cut(s)	667, 1244, 1507
BssAI	RCCGGY	1 cut(s)	1284
BssECI	CCNNGG	6 cut(s)	99, 145, 383, 1421, 1564, 1565
BssMI	GATC	2 cut(s)	1251, 1399
BssNAI	GTATAC	1 cut(s)	1208
BssNI	GRCGYC	1 cut(s)	1387
BssT1I	CCWWGG	3 cut(s)	99, 145, 383
Bst1107I	GTATAC	1 cut(s)	1208
Bst2UI	CCWGG	2 cut(s)	1566, 1754
Bst4CI	ACNGT	6 cut(s)	320, 348, 365, 497, 695, 1092
Bst6I	CTCTTC	1 cut(s)	102
BstACI	GRCGYC	1 cut(s)	1387
BstAUI	TGTACA	1 cut(s)	715
BstC8I	GCNNGC	4 cut(s)	371, 1561, 1636, 1668
BstDEI	CTNAG	5 cut(s)	209, 591, 896, 938, 1644
BstF5I	GGATG	5 cut(s)	109, 691, 1609, 1825, 1834
BstHHI	GCGC	2 cut(s)	525, 1794
BstKTI	GATC	2 cut(s)	1254, 1402
BstMAI	GTCTC	5 cut(s)	200, 508, 684, 892, 1130
BstMBI	GATC	2 cut(s)	1251, 1399
BstMWI	GCNNNNNNNGC	5 cut(s)	183, 746, 755, 860, 1061
BstNI	CCWGG	2 cut(s)	1566, 1754
BstNSI	RCATGY	1 cut(s)	1469
BstSCI	CCNGG	4 cut(s)	1395, 1421, 1564, 1752
BstSFI	CTRYAG	1 cut(s)	1236
BstSLI	GKGCMC	2 cut(s)	827, 1022
BstV1I	GCAGC	6 cut(s)	94, 186, 921, 1022, 1520, 1690
BstV2I	GAAGAC	1 cut(s)	979
BstZ17I	GTATAC	1 cut(s)	1208
BsuRI	GGCC	3 cut(s)	150, 585, 1666
BtrI	CACGTC	1 cut(s)	518
BtsCI	GGATG	5 cut(s)	109, 691, 1609, 1825, 1834
BtsI	GCAGTG	2 cut(s)	1054, 1245
BtsIMutI	CAGTG	4 cut(s)	325, 1054, 1245, 1500
BveI	ACCTGC	1 cut(s)	1361
Cac8I	GCNNGC	4 cut(s)	371, 1561, 1636, 1668
CfoI	GCGC	2 cut(s)	525, 1794
Cfr10I	RCCGGY	1 cut(s)	1284
Cfr13I	GGNCC	2 cut(s)	380, 583
CseI	GACGC	1 cut(s)	1376
Csp6I	GTAC	5 cut(s)	361, 698, 716, 782, 1450
CspAI	ACCGGT	1 cut(s)	1284
CviAII	CATG	7 cut(s)	31, 78, 220, 805, 859, 1466, 1671
CviQI	GTAC	5 cut(s)	361, 698, 716, 782, 1450
DdeI	CTNAG	5 cut(s)	209, 591, 896, 938, 1644
DpnI	GATC	2 cut(s)	1253, 1401
DpnII	GATC	2 cut(s)	1251, 1399
EaeI	YGGCCR	1 cut(s)	148
Eam1104I	CTCTTC	1 cut(s)	102
EarI	CTCTTC	1 cut(s)	102
EciI	GGCGGA	1 cut(s)	1828
Eco130I	CCWWGG	3 cut(s)	99, 145, 383
Eco24I	GRGCYC	2 cut(s)	208, 439
Eco31I	GGTCTC	1 cut(s)	684
Eco47I	GGWCC	1 cut(s)	380
Eco57I	CTGAAG	2 cut(s)	726, 1236
Eco88I	CYCGRG	2 cut(s)	835, 1314
EcoO109I	RGGNCCY	1 cut(s)	380
EcoRII	CCWGG	2 cut(s)	1564, 1752
EcoT14I	CCWWGG	3 cut(s)	99, 145, 383
EcoT22I	ATGCAT	1 cut(s)	856
EcoT38I	GRGCYC	2 cut(s)	208, 439
ErhI	CCWWGG	3 cut(s)	99, 145, 383
Esp3I	CGTCTC	4 cut(s)	200, 508, 892, 1130
FaeI	CATG	7 cut(s)	34, 81, 223, 808, 862, 1469, 1674
FaqI	GGGAC	2 cut(s)	560, 1586
FatI	CATG	7 cut(s)	30, 77, 219, 804, 858, 1465, 1670
FauNDI	CATATG	1 cut(s)	130
FblI	GTMKAC	2 cut(s)	264, 1207
Fnu4HI	GCNGC	8 cut(s)	83, 175, 910, 913, 1011, 1045, 1509, 1704
FokI	GGATG	4 cut(s)	116, 698, 1616, 1832
FriOI	GRGCYC	2 cut(s)	208, 439
Fsp4HI	GCNGC	8 cut(s)	83, 175, 910, 913, 1011, 1045, 1509, 1704
FspAI	RTGCGCAY	1 cut(s)	524
FspBI	CTAG	6 cut(s)	233, 776, 977, 1161, 1560, 1635
FspI	TGCGCA	1 cut(s)	524
GlaI	GCGC	2 cut(s)	524, 1793
GluI	GCNGC	8 cut(s)	83, 175, 910, 913, 1011, 1045, 1509, 1704
GsaI	CCCAGC	1 cut(s)	1791
GsuI	CTGGAG	3 cut(s)	684, 726, 1346
HaeIII	GGCC	3 cut(s)	150, 585, 1666
HapII	CCGG	3 cut(s)	1285, 1397, 1423
HgaI	GACGC	1 cut(s)	1376
HhaI	GCGC	2 cut(s)	525, 1794
Hin1I	GRCGYC	1 cut(s)	1387
Hin1II	CATG	7 cut(s)	34, 81, 223, 808, 862, 1469, 1674
Hin6I	GCGC	2 cut(s)	523, 1792
HinP1I	GCGC	2 cut(s)	523, 1792
HincII	GTYRAC	2 cut(s)	265, 1391
HindII	GTYRAC	2 cut(s)	265, 1391
HindIII	AAGCTT	1 cut(s)	1062
HpaII	CCGG	3 cut(s)	1285, 1397, 1423
HphI	GGTGA	5 cut(s)	19, 253, 431, 1469, 1768
Hpy188I	TCNGA	7 cut(s)	64, 313, 941, 1256, 1473, 1647, 1768
Hpy99I	CGWCG	1 cut(s)	1690
HpyAV	CCTTC	3 cut(s)	596, 711, 1810
HpyCH4III	ACNGT	6 cut(s)	320, 348, 365, 497, 695, 1092
HpyCH4IV	ACGT	4 cut(s)	506, 517, 901, 1685
HpyF10VI	GCNNNNNNNGC	5 cut(s)	183, 746, 755, 860, 1061
HpyF3I	CTNAG	5 cut(s)	209, 591, 896, 938, 1644
HpySE526I	ACGT	4 cut(s)	506, 517, 901, 1685
Hsp92I	GRCGYC	1 cut(s)	1387
Hsp92II	CATG	7 cut(s)	34, 81, 223, 808, 862, 1469, 1674
HspAI	GCGC	2 cut(s)	523, 1792
Kzo9I	GATC	2 cut(s)	1251, 1399
LmnI	GCTCC	5 cut(s)	71, 290, 791, 1327, 1743
Lsp1109I	GCAGC	6 cut(s)	94, 186, 921, 1022, 1520, 1690
LweI	GCATC	4 cut(s)	124, 153, 841, 1108
MaeI	CTAG	6 cut(s)	233, 776, 977, 1161, 1560, 1635
MaeII	ACGT	4 cut(s)	506, 517, 901, 1685
MaeIII	GTNAC	1 cut(s)	419
MalI	GATC	2 cut(s)	1253, 1401
MboI	GATC	2 cut(s)	1251, 1399
MboII	GAAGA	4 cut(s)	119, 984, 1070, 1565
MfeI	CAATTG	2 cut(s)	817, 1594
MhlI	GDGCHC	4 cut(s)	208, 439, 827, 1022
MlsI	TGGCCA	1 cut(s)	150
MluNI	TGGCCA	1 cut(s)	150
MlyI	GAGTC	5 cut(s)	223, 260, 1226, 1306, 1483
MmeI	TCCRAC	2 cut(s)	330, 1275
Mox20I	TGGCCA	1 cut(s)	150
Mph1103I	ATGCAT	1 cut(s)	856
MscI	TGGCCA	1 cut(s)	150
MseI	TTAA	7 cut(s)	531, 951, 1029, 1073, 1103, 1149, 1536
MslI	CAYNNNNRTG	3 cut(s)	642, 880, 1346
Msp20I	TGGCCA	1 cut(s)	150
MspI	CCGG	3 cut(s)	1285, 1397, 1423
MspR9I	CCNGG	4 cut(s)	1397, 1423, 1566, 1754
MunI	CAATTG	2 cut(s)	817, 1594
Mva1269I	GAATGC	1 cut(s)	854
MvaI	CCWGG	2 cut(s)	1566, 1754
MwoI	GCNNNNNNNGC	5 cut(s)	183, 746, 755, 860, 1061
NciI	CCSGG	2 cut(s)	1397, 1423
NdeI	CATATG	1 cut(s)	130
NdeII	GATC	2 cut(s)	1251, 1399
NheI	GCTAGC	2 cut(s)	1559, 1634
NlaIII	CATG	7 cut(s)	34, 81, 223, 808, 862, 1469, 1674
NlaIV	GGNNCC	3 cut(s)	292, 331, 381
NmuCI	GTSAC	1 cut(s)	419
NsbI	TGCGCA	1 cut(s)	524
NsiI	ATGCAT	1 cut(s)	856
NspI	RCATGY	1 cut(s)	1469
PaeR7I	CTCGAG	1 cut(s)	1314
PasI	CCCWGGG	1 cut(s)	1565
PcsI	WCGNNNNNNNCGW	1 cut(s)	199
PctI	GAATGC	1 cut(s)	854
PfeI	GAWTC	6 cut(s)	472, 710, 808, 1298, 1374, 1495
PflMI	CCANNNNNTGG	1 cut(s)	225
PinAI	ACCGGT	1 cut(s)	1284
PkrI	GCNGC	8 cut(s)	84, 176, 911, 914, 1012, 1046, 1510, 1705
PleI	GAGTC	5 cut(s)	223, 260, 1226, 1306, 1482
PpsI	GAGTC	5 cut(s)	223, 260, 1226, 1306, 1482
PpuMI	RGGWCCY	1 cut(s)	380
Psp5II	RGGWCCY	1 cut(s)	380
Psp6I	CCWGG	2 cut(s)	1564, 1752
PspFI	CCCAGC	1 cut(s)	1787
PspGI	CCWGG	2 cut(s)	1564, 1752
PspN4I	GGNNCC	3 cut(s)	292, 331, 381
PspPI	GGNCC	2 cut(s)	380, 583
PspPPI	RGGWCCY	1 cut(s)	380
PspXI	VCTCGAGB	1 cut(s)	1314
PstI	CTGCAG	1 cut(s)	1240
RsaI	GTAC	5 cut(s)	362, 699, 717, 783, 1451
RsaNI	GTAC	5 cut(s)	361, 698, 716, 782, 1450
RseI	CAYNNNNRTG	3 cut(s)	642, 880, 1346
SalI	GTCGAC	1 cut(s)	263
SaqAI	TTAA	7 cut(s)	531, 951, 1029, 1073, 1103, 1149, 1536
SatI	GCNGC	8 cut(s)	83, 175, 910, 913, 1011, 1045, 1509, 1704
Sau3AI	GATC	2 cut(s)	1251, 1399
Sau96I	GGNCC	2 cut(s)	380, 583
SchI	GAGTC	5 cut(s)	223, 260, 1226, 1306, 1483
ScrFI	CCNGG	4 cut(s)	1397, 1423, 1566, 1754
SduI	GDGCHC	4 cut(s)	208, 439, 827, 1022
SfaNI	GCATC	4 cut(s)	124, 153, 841, 1108
SfcI	CTRYAG	1 cut(s)	1236
Sfr274I	CTCGAG	1 cut(s)	1314
SinI	GGWCC	1 cut(s)	380
SlaI	CTCGAG	1 cut(s)	1314
SmiMI	CAYNNNNRTG	3 cut(s)	642, 880, 1346
SmlI	CTYRAG	1 cut(s)	1314
SmoI	CTYRAG	1 cut(s)	1314
SpeI	ACTAGT	1 cut(s)	976
SsiI	CCGC	3 cut(s)	913, 1044, 1813
SspMI	CTAG	6 cut(s)	233, 776, 977, 1161, 1560, 1635
StyD4I	CCNGG	4 cut(s)	1395, 1421, 1564, 1752
StyI	CCWWGG	3 cut(s)	99, 145, 383
TaaI	ACNGT	6 cut(s)	320, 348, 365, 497, 695, 1092
TaiI	ACGT	4 cut(s)	509, 520, 904, 1688
TaqI	TCGA	6 cut(s)	202, 264, 439, 642, 1315, 1688
TatI	WGTACW	3 cut(s)	715, 781, 1449
TauI	GCSGC	2 cut(s)	915, 1047
TfiI	GAWTC	6 cut(s)	472, 710, 808, 1298, 1374, 1495
Tru1I	TTAA	7 cut(s)	531, 951, 1029, 1073, 1103, 1149, 1536
Tru9I	TTAA	7 cut(s)	531, 951, 1029, 1073, 1103, 1149, 1536
TscAI	CASTG	4 cut(s)	325, 1054, 1245, 1507
TseFI	GTSAC	1 cut(s)	419
TseI	GCWGC	6 cut(s)	82, 174, 909, 1010, 1508, 1703
Tsp45I	GTSAC	1 cut(s)	419
TspDTI	ATGAA	7 cut(s)	24, 120, 570, 847, 921, 1158, 1628
TspRI	CASTG	4 cut(s)	325, 1054, 1245, 1507
Van91I	CCANNNNNTGG	1 cut(s)	225
VneI	GTGCAC	2 cut(s)	823, 1018
VpaK11BI	GGWCC	1 cut(s)	380
XapI	RAATTY	4 cut(s)	19, 1132, 1760, 1802
XbaI	TCTAGA	2 cut(s)	232, 1160
XceI	RCATGY	1 cut(s)	1469
XcmI	CCANNNNNNNNNTGG	1 cut(s)	323
XhoI	CTCGAG	1 cut(s)	1314
XmiI	GTMKAC	2 cut(s)	264, 1207
XspI	CTAG	6 cut(s)	233, 776, 977, 1161, 1560, 1635
Zsp2I	ATGCAT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.