Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0008486

Physical Location & Seq

Genomic Coordinates Reverse (-)

36446424 .. 36451952

Gene Structure 5529 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029317

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGCCGGTGGCCATACGGCGCCGTGGCAGCCGCGGTGACACTCCTGCGGGCGGAGGCGGCGGTGGTGCGAGCAATGGTACCGGGAATAATAGCACCAGTAATATTAATCACAACAATAATTGTAATAGTAATAATAGTAGCTGCTGTAACATGAGCCTCAAGTGTAGGTGTAAATGGAGGTGCCTGATGTCGTCGGGGTTCGTTTTCTTCTTCGGCTGTTTTGTGTTGTTTGGATCAGTCGCTACGATTTATGCCTGGTTTGCTTTCACGCCGTATTATTATGCTCGGAGCACGGTGGAGGAGTCCTCGTCGTCGGCCGCCGTGCTTGGGTGTCAGGAGGACAATGAAGGCTCTTGGTCTGTTGGTGTTTTCTTCGGTGACTCTCCCTTTAATCTCAAGCCCATTGAAGCTACGAATGTATGGAGAGACAAGAGTGCCGCCTGGCCTGTGGCAAACCCTGTTGTGACTTGTGCTTCAGTTTCTGAATCTGGTTTCCCAAGTAATTTTGTGGCTGATCCTTTCCTTTATGTTCAGGGAGATACTTTGTACATGTTCTATGAAACCAAAAATTCAATCACTATGCAAGGAGATATTGGGGTTTCAAAAAGCTCTGATAAAGGAGCAACATGGCAGCAATTAGGCATTGCCTTGGATGAAGAGTGGCATCTCTCTTATCCATATGTCTTTCACTACCTTGGCCATATATATATGATGCCTGAAAGCAGCACAAACGGCGAAGTTCGTCTCTATCGAGCCCTCAGTTTTCCCATGCAATGGACTCTAGAAAAGGTGATCTTGAAAAAGCCTCTTGTCGACTCATTCCTTATCCATTACGATGGAGCCTATTGGCTTTTCGGTTCAGACCACAGTGGATTTGGCACCACAAAGAATGGACAGTTGGAAATCTGGTACAGTAGCTCGCCTTTGGGTCCTTGGAAACCACACAAGAAGAACCCTATATATAATGGTGACAAGAGCTTTGGGGCTCGAAATGGAGGCAGACCATTTTTTTACAATGGGAATCTCTATCGCTTTGGTCAAGACTGTGCTGAAACGTATGGGAGACGTGTGCACACCTTTAAGGTGGAAGTTCTTACCAAAGATGAATATAAGGAAGTTGAAGTCCCGTTGGGCCTTCCTGAGCCAAGTAAGGGTCGCAATGCTTGGAATGGTGTTCGCTTCCATCATCTCGATGTGCAACAACTAAATACTGGAGGGTGGATTGCAGTAATGGATGGAGACCGTGTACCTTCTGGAGATTCTGTACACAGGTTTATTGTTGGTAGTGCTTCAGTTGCCATTGTTGCTATACTTGTTATATTACTCGGTGTACTACTTGGAGCTGTGAAGTGCATGATTCCTCCCAGTTGGTGCACTCACAACTCGGGTAAGAGAAGTGATGCATTCTTGGCTTGTGAAAGGTCATATCTGTATTCGTCCAAACTGAGACGTTTTTGCAGCCGCTTGAACAGAGCAGTTTCATTCCTCAGAGGTAGGATTAAGCCTAATACCTGTGCTGGAAGACTAGTTCTTGCTATATATTTGGCATTTGGAGTGGCAGCTATGTGCACAGGGGTTAAATATATCTATGGCGGCAGTGGTGCAGAAGAAGCTTACCCATTAAAAGGTCATTACTCACAGTTCACATTATTAACAATGACTTATGATGCTCGTCTCTGGAATTTGAAAATGTATGTTAAACACTATTCTAGATGTTCATCGGTAAGAGAAATTGTTGTGGTGTGGAACAAGGGTATACCTCCTGAAGCGAGTGATTTTGACTCTGCAGTGCCAGTTAGGATCAGAGTAGAGAAACAGAACTCCCTGAATAACCGGTTCAAGTTGGATTCTTTGATAAAGACTCGAGCTGTTCTGGAGCTTGATGACGACATTATGATGACCTGCAATGATATTGAGAGAGGATTCAGGATATGGCGTCAACACCCGGATCGTATTGTGGGTTTCTACCCCCGGCTCATTGATGGAAGTCCATTGAAGTACAGAGGTGAGAAACATGCTCGGAGTCATAGAGGCTATAATATGATTCTCACTGGGGCAGCTTTCCTTGATAGCCAAGTTGCTTTTAAGAGGTATTGGAGTGAAGAAGCTAGCCCAGGGAGGGACTTTGTGGACAAGTCTTTCAATTGCGAGGACGTGCTTATGAATTACCTGTATGCAAATGCTAGCTCATCTCAGAATGTGGAGTATGTGAGGCCAGCATGGGCAATAGATACGTCGAAGTTATCTGGTGCTGCTATTAGCCGAAATACCCAAGTTCACTACAACAAGAGGAGCAACTGCCTGGTGAAATTTTCTGAAATGTATGGAACTTTGGCTGGGCGCAAGTGGGAATTTGATGGGCGGAAGGATGGGTGGGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006029 GO:0006040 GO:0006044 GO:0006082 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008101 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0008589 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0015012 GO:0015014 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0030111 GO:0030166 GO:0030177 GO:0030201 GO:0030202 GO:0030203 GO:0030204 GO:0030206 GO:0030210 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045880 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050508 GO:0050509 GO:0050650 GO:0050654 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060828 GO:0065007 GO:0071704 GO:0090092 GO:0090097 GO:0090098 GO:0090100 GO:0090263 GO:1901071 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903510

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_64

Protein Analysis

795

Amino Acids

89.13

Weight (kDa)

8.99

Isoelectric Point (pI)

45.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GINT1_N	PF24793	111 - 414	8.1e-178	Glucosamine inositolphosphorylceramide transferase 1, N-terminal
Glyco_transf_64	PF09258	548 - 783	2.2e-63	Glycosyl transferase family 64 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04500
fragaria_vesca	FvH4_7g07030 FvH4_7g07030
malus_domestica	MD02G1240800.v1.1 MD02G1240900.v1.1 MD07G1076200.v1.1
prunus_persica	Prupe.2G096900_v2.0.a1
pyrus_communis	pycom02g20590 pycom07g06000
rosa_chinensis	RchiOBHm_Chr1g0336981 RchiOBHm_Chr1g0359101 RchiOBHm_Chr4g0385241
rosa_laevigata	RLG00000029317
rosa_multiflora	Rmu_sc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026440
rosa_rugosa	Rorug01G0129300
rosa_samantha	Rh1AG150300 Rh1BG118500 Rh1CG141600 Rh1DG157400 Rh1DG185700
rosa_wichuraiana	Rw1G012140 Rw1G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1910
Acc65I	GGTACC	1 cut(s)	77
AccB1I	GGYRCC	4 cut(s)	18, 77, 180, 878
AccB7I	CCANNNNNTGG	1 cut(s)	774
AccI	GTMKAC	2 cut(s)	813, 1756
AccII	CGCG	1 cut(s)	33
AclWI	GGATC	4 cut(s)	241, 509, 1808, 1956
AcoI	YGGCCR	3 cut(s)	9, 315, 697
AcsI	RAATTY	4 cut(s)	568, 1681, 2309, 2351
AcuI	CTGAAG	3 cut(s)	459, 1275, 1785
AcyI	GRCGYC	2 cut(s)	19, 1936
AfaI	GTAC	7 cut(s)	79, 548, 911, 1248, 1266, 1332, 2000
AfiI	CCNNNNNNNGG	6 cut(s)	50, 327, 774, 1151, 1625, 2119
AflIII	ACRYGT	2 cut(s)	549, 1066
AgeI	ACCGGT	1 cut(s)	1833
AhlI	ACTAGT	1 cut(s)	1525
AjiI	CACGTC	2 cut(s)	1067, 2155
AjnI	CCWGG	4 cut(s)	254, 440, 2113, 2301
AjuI	GAANNNNNNNTTGG	2 cut(s)	881, 913
AloI	GAACNNNNNNTCC	2 cut(s)	1512, 1544
Alw21I	GWGCWC	4 cut(s)	293, 1074, 1376, 1571
Alw26I	GTCTC	6 cut(s)	420, 749, 1057, 1233, 1441, 1679
Alw44I	GTGCAC	3 cut(s)	1070, 1372, 1567
AlwI	GGATC	4 cut(s)	241, 509, 1808, 1956
AlwNI	CAGNNNCTG	1 cut(s)	482
Ama87I	CYCGRG	2 cut(s)	1384, 1863
AoxI	GGCC	6 cut(s)	9, 315, 443, 697, 1132, 2213
ApaLI	GTGCAC	3 cut(s)	1070, 1372, 1567
ApeKI	GCWGC	8 cut(s)	27, 141, 631, 723, 1458, 1559, 2057, 2252
ApoI	RAATTY	4 cut(s)	568, 1681, 2309, 2351
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
AseI	ATTAAT	1 cut(s)	105
AsiGI	ACCGGT	1 cut(s)	1833
Asp718I	GGTACC	1 cut(s)	77
AspLEI	GCGC	2 cut(s)	21, 2343
AspS9I	GGNCC	2 cut(s)	929, 1132
AsuC2I	CCSGG	3 cut(s)	82, 1946, 1972
AsuHPI	GGTGA	6 cut(s)	47, 389, 802, 980, 2018, 2317
AsuNHI	GCTAGC	2 cut(s)	2108, 2183
AvaI	CYCGRG	2 cut(s)	1384, 1863
AvaII	GGWCC	1 cut(s)	929
BaeGI	GKGCMC	3 cut(s)	1074, 1376, 1571
BalI	TGGCCA	2 cut(s)	11, 699
BanI	GGYRCC	4 cut(s)	18, 77, 180, 878
BanII	GRGCYC	2 cut(s)	757, 988
BbsI	GAAGAC	1 cut(s)	1528
Bbv12I	GWGCWC	4 cut(s)	293, 1074, 1376, 1571
BbvI	GCAGC	8 cut(s)	39, 128, 643, 735, 1470, 1571, 2069, 2239
BccI	CCATC	6 cut(s)	830, 1191, 1229, 1976, 2351, 2363
BceAI	ACGGC	5 cut(s)	6, 32, 256, 305, 748
BciT130I	CCWGG	4 cut(s)	256, 442, 2115, 2303
BcnI	CCSGG	3 cut(s)	82, 1946, 1972
BcoDI	GTCTC	6 cut(s)	420, 749, 1057, 1233, 1441, 1679
BcuI	ACTAGT	1 cut(s)	1525
BfaI	CTAG	5 cut(s)	782, 1526, 1710, 2109, 2184
BfmI	CTRYAG	1 cut(s)	1785
BfoI	RGCGCY	1 cut(s)	22
BfuAI	ACCTGC	1 cut(s)	1910
Bme1390I	CCNGG	7 cut(s)	82, 256, 442, 1946, 1972, 2115, 2303
Bme18I	GGWCC	1 cut(s)	929
BmeT110I	CYCGRG	2 cut(s)	1384, 1863
BmgBI	CACGTC	2 cut(s)	1067, 2155
BmgT120I	GGNCC	2 cut(s)	929, 1132
BmiI	GGNNCC	6 cut(s)	20, 79, 182, 841, 880, 930
BmrFI	CCNGG	7 cut(s)	82, 256, 442, 1946, 1972, 2115, 2303
BmrI	ACTGGG	2 cut(s)	1359, 2061
BmsI	GCATC	4 cut(s)	673, 702, 1390, 1657
BmtI	GCTAGC	2 cut(s)	2112, 2187
BmuI	ACTGGG	2 cut(s)	1359, 2061
BpiI	GAAGAC	1 cut(s)	1528
BplI	GAGNNNNNCTC	2 cut(s)	290, 322
BpmI	CTGGAG	3 cut(s)	1233, 1275, 1895
Bpu10I	CCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	143, 380
BpuMI	CCSGG	3 cut(s)	82, 1946, 1972
BsaBI	GATNNNNATC	1 cut(s)	1717
BsaHI	GRCGYC	2 cut(s)	19, 1936
BsaI	GGTCTC	1 cut(s)	1233
BsaJI	CCNNGG	8 cut(s)	22, 31, 648, 694, 932, 1970, 2113, 2114
BsaWI	WCCGGW	1 cut(s)	1833
BsaXI	ACNNNNNCTCC	6 cut(s)	293, 323, 1230, 1248, 1260, 1278
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 327, 774, 1151, 1625, 2119
Bse118I	RCCGGY	2 cut(s)	4, 1833
Bse1I	ACTGG	5 cut(s)	96, 1216, 1365, 1793, 2056
Bse3DI	GCAATG	5 cut(s)	79, 642, 779, 1165, 1912
Bse8I	GATNNNNATC	1 cut(s)	1717
BseBI	CCWGG	4 cut(s)	256, 442, 2115, 2303
BseDI	CCNNGG	8 cut(s)	22, 31, 648, 694, 932, 1970, 2113, 2114
BseGI	GGATG	4 cut(s)	658, 1240, 2374, 2383
BseJI	GATNNNNATC	1 cut(s)	1717
BseLI	CCNNNNNNNGG	6 cut(s)	50, 327, 774, 1151, 1625, 2119
BseMI	GCAATG	5 cut(s)	79, 642, 779, 1165, 1912
BseMII	CTCAG	5 cut(s)	772, 1131, 1436, 1501, 2207
BseNI	ACTGG	5 cut(s)	96, 1216, 1365, 1793, 2056
BseRI	GAGGAG	2 cut(s)	314, 2305
BseSI	GKGCMC	3 cut(s)	1074, 1376, 1571
BseX3I	CGGCCG	1 cut(s)	315
BseXI	GCAGC	8 cut(s)	39, 128, 643, 735, 1470, 1571, 2069, 2239
BseYI	CCCAGC	1 cut(s)	2336
BsgI	GTGCAG	1 cut(s)	1623
Bsh1236I	CGCG	1 cut(s)	33
Bsh1285I	CGRYCG	1 cut(s)	318
BshFI	GGCC	6 cut(s)	11, 317, 445, 699, 1134, 2215
BshNI	GGYRCC	4 cut(s)	18, 77, 180, 878
BshTI	ACCGGT	1 cut(s)	1833
BsiEI	CGRYCG	1 cut(s)	318
BsiHKAI	GWGCWC	4 cut(s)	293, 1074, 1376, 1571
BsiHKCI	CYCGRG	2 cut(s)	1384, 1863
BsiSI	CCGG	5 cut(s)	5, 81, 1834, 1946, 1972
BslFI	GGGAC	2 cut(s)	1109, 2135
BslI	CCNNNNNNNGG	6 cut(s)	50, 327, 774, 1151, 1625, 2119
BsmAI	GTCTC	6 cut(s)	420, 749, 1057, 1233, 1441, 1679
BsmBI	CGTCTC	4 cut(s)	749, 1057, 1441, 1679
BsmFI	GGGAC	2 cut(s)	1109, 2135
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	6 cut(s)	11, 317, 445, 699, 1134, 2215
Bso31I	GGTCTC	1 cut(s)	1233
BsoBI	CYCGRG	2 cut(s)	1384, 1863
Bsp1286I	GDGCHC	6 cut(s)	293, 757, 988, 1074, 1376, 1571
Bsp1407I	TGTACA	2 cut(s)	546, 1264
Bsp143I	GATC	5 cut(s)	233, 514, 792, 1800, 1948
BspANI	GGCC	6 cut(s)	11, 317, 445, 699, 1134, 2215
BspCNI	CTCAG	5 cut(s)	771, 1132, 1437, 1500, 2206
BspFNI	CGCG	1 cut(s)	33
BspLI	GGNNCC	6 cut(s)	20, 79, 182, 841, 880, 930
BspMAI	CTGCAG	1 cut(s)	1789
BspMI	ACCTGC	1 cut(s)	1910
BspOI	GCTAGC	2 cut(s)	2112, 2187
BspPI	GGATC	4 cut(s)	241, 509, 1808, 1956
BspT107I	GGYRCC	4 cut(s)	18, 77, 180, 878
BspTNI	GGTCTC	1 cut(s)	1233
BsrDI	GCAATG	5 cut(s)	79, 642, 779, 1165, 1912
BsrFI	RCCGGY	2 cut(s)	4, 1833
BsrGI	TGTACA	2 cut(s)	546, 1264
BsrI	ACTGG	5 cut(s)	96, 1216, 1365, 1793, 2056
BssAI	RCCGGY	2 cut(s)	4, 1833
BssECI	CCNNGG	8 cut(s)	22, 31, 648, 694, 932, 1970, 2113, 2114
BssMI	GATC	5 cut(s)	233, 514, 792, 1800, 1948
BssNAI	GTATAC	1 cut(s)	1757
BssNI	GRCGYC	2 cut(s)	19, 1936
BssT1I	CCWWGG	3 cut(s)	648, 694, 932
Bst1107I	GTATAC	1 cut(s)	1757
Bst2UI	CCWGG	4 cut(s)	256, 442, 2115, 2303
Bst4CI	ACNGT	7 cut(s)	295, 869, 897, 914, 1046, 1244, 1641
Bst6I	CTCTTC	1 cut(s)	651
BstACI	GRCGYC	2 cut(s)	19, 1936
BstAUI	TGTACA	2 cut(s)	546, 1264
BstC8I	GCNNGC	6 cut(s)	49, 70, 920, 2110, 2185, 2217
BstDEI	CTNAG	5 cut(s)	758, 1140, 1445, 1487, 2193
BstDSI	CCRYGG	2 cut(s)	22, 31
BstF5I	GGATG	4 cut(s)	658, 1240, 2374, 2383
BstFNI	CGCG	1 cut(s)	33
BstH2I	RGCGCY	1 cut(s)	22
BstHHI	GCGC	2 cut(s)	21, 2343
BstKTI	GATC	5 cut(s)	236, 517, 795, 1803, 1951
BstMAI	GTCTC	6 cut(s)	420, 749, 1057, 1233, 1441, 1679
BstMBI	GATC	5 cut(s)	233, 514, 792, 1800, 1948
BstMCI	CGRYCG	1 cut(s)	318
BstMWI	GCNNNNNNNGC	8 cut(s)	27, 57, 260, 732, 1295, 1304, 1409, 1610
BstNI	CCWGG	4 cut(s)	256, 442, 2115, 2303
BstNSI	RCATGY	2 cut(s)	553, 2018
BstSCI	CCNGG	7 cut(s)	80, 254, 440, 1944, 1970, 2113, 2301
BstSFI	CTRYAG	1 cut(s)	1785
BstSLI	GKGCMC	3 cut(s)	1074, 1376, 1571
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	8 cut(s)	39, 128, 643, 735, 1470, 1571, 2069, 2239
BstV2I	GAAGAC	1 cut(s)	1528
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstZ17I	GTATAC	1 cut(s)	1757
BstZI	CGGCCG	1 cut(s)	315
BsuRI	GGCC	6 cut(s)	11, 317, 445, 699, 1134, 2215
BtgI	CCRYGG	2 cut(s)	22, 31
BtrI	CACGTC	2 cut(s)	1067, 2155
BtsCI	GGATG	4 cut(s)	658, 1240, 2374, 2383
BtsI	GCAGTG	2 cut(s)	1603, 1794
BtsIMutI	CAGTG	4 cut(s)	874, 1603, 1794, 2049
BveI	ACCTGC	1 cut(s)	1910
Cac8I	GCNNGC	6 cut(s)	49, 70, 920, 2110, 2185, 2217
CaiI	CAGNNNCTG	1 cut(s)	482
CfoI	GCGC	2 cut(s)	21, 2343
Cfr10I	RCCGGY	2 cut(s)	4, 1833
Cfr13I	GGNCC	2 cut(s)	929, 1132
Cfr42I	CCGCGG	1 cut(s)	34
CseI	GACGC	1 cut(s)	1925
Csp6I	GTAC	7 cut(s)	78, 547, 910, 1247, 1265, 1331, 1999
CspAI	ACCGGT	1 cut(s)	1833
CviAII	CATG	7 cut(s)	151, 550, 627, 769, 1354, 2015, 2220
CviQI	GTAC	7 cut(s)	78, 547, 910, 1247, 1265, 1331, 1999
DdeI	CTNAG	5 cut(s)	758, 1140, 1445, 1487, 2193
DinI	GGCGCC	1 cut(s)	20
DpnI	GATC	5 cut(s)	235, 516, 794, 1802, 1950
DpnII	GATC	5 cut(s)	233, 514, 792, 1800, 1948
EaeI	YGGCCR	3 cut(s)	9, 315, 697
EagI	CGGCCG	1 cut(s)	315
Eam1104I	CTCTTC	1 cut(s)	651
EarI	CTCTTC	1 cut(s)	651
EciI	GGCGGA	2 cut(s)	66, 2377
EclXI	CGGCCG	1 cut(s)	315
Eco130I	CCWWGG	3 cut(s)	648, 694, 932
Eco24I	GRGCYC	2 cut(s)	757, 988
Eco31I	GGTCTC	1 cut(s)	1233
Eco47I	GGWCC	1 cut(s)	929
Eco52I	CGGCCG	1 cut(s)	315
Eco57I	CTGAAG	3 cut(s)	459, 1275, 1785
Eco88I	CYCGRG	2 cut(s)	1384, 1863
EcoO109I	RGGNCCY	1 cut(s)	929
EcoRII	CCWGG	4 cut(s)	254, 440, 2113, 2301
EcoT14I	CCWWGG	3 cut(s)	648, 694, 932
EcoT22I	ATGCAT	1 cut(s)	1405
EcoT38I	GRGCYC	2 cut(s)	757, 988
EgeI	GGCGCC	1 cut(s)	20
EheI	GGCGCC	1 cut(s)	20
ErhI	CCWWGG	3 cut(s)	648, 694, 932
Esp3I	CGTCTC	4 cut(s)	749, 1057, 1441, 1679
FaeI	CATG	7 cut(s)	154, 553, 630, 772, 1357, 2018, 2223
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	2 cut(s)	1109, 2135
FatI	CATG	7 cut(s)	150, 549, 626, 768, 1353, 2014, 2219
FauI	CCCGC	1 cut(s)	40
FauNDI	CATATG	1 cut(s)	679
FblI	GTMKAC	2 cut(s)	813, 1756
FokI	GGATG	3 cut(s)	665, 1247, 2381
FriOI	GRGCYC	2 cut(s)	757, 988
FspBI	CTAG	5 cut(s)	782, 1526, 1710, 2109, 2184
GlaI	GCGC	2 cut(s)	20, 2342
GsaI	CCCAGC	1 cut(s)	2340
GsuI	CTGGAG	3 cut(s)	1233, 1275, 1895
HaeII	RGCGCY	1 cut(s)	22
HaeIII	GGCC	6 cut(s)	11, 317, 445, 699, 1134, 2215
HapII	CCGG	5 cut(s)	5, 81, 1834, 1946, 1972
HgaI	GACGC	1 cut(s)	1925
HhaI	GCGC	2 cut(s)	21, 2343
Hin1I	GRCGYC	2 cut(s)	19, 1936
Hin1II	CATG	7 cut(s)	154, 553, 630, 772, 1357, 2018, 2223
Hin6I	GCGC	2 cut(s)	19, 2341
HinP1I	GCGC	2 cut(s)	19, 2341
HincII	GTYRAC	2 cut(s)	814, 1940
HindII	GTYRAC	2 cut(s)	814, 1940
HindIII	AAGCTT	1 cut(s)	1611
HpaII	CCGG	5 cut(s)	5, 81, 1834, 1946, 1972
HphI	GGTGA	6 cut(s)	47, 389, 802, 980, 2018, 2317
Hpy188I	TCNGA	9 cut(s)	288, 484, 613, 862, 1490, 1805, 2022, 2196, 2317
Hpy99I	CGWCG	4 cut(s)	196, 313, 316, 2239
HpyAV	CCTTC	4 cut(s)	341, 1145, 1260, 2359
HpyCH4III	ACNGT	7 cut(s)	295, 869, 897, 914, 1046, 1244, 1641
HpyCH4IV	ACGT	5 cut(s)	1055, 1066, 1450, 2154, 2234
HpyF10VI	GCNNNNNNNGC	8 cut(s)	27, 57, 260, 732, 1295, 1304, 1409, 1610
HpyF3I	CTNAG	5 cut(s)	758, 1140, 1445, 1487, 2193
HpySE526I	ACGT	5 cut(s)	1055, 1066, 1450, 2154, 2234
Hsp92I	GRCGYC	2 cut(s)	19, 1936
Hsp92II	CATG	7 cut(s)	154, 553, 630, 772, 1357, 2018, 2223
HspAI	GCGC	2 cut(s)	19, 2341
KasI	GGCGCC	1 cut(s)	18
KpnI	GGTACC	1 cut(s)	81
KspI	CCGCGG	1 cut(s)	34
Kzo9I	GATC	5 cut(s)	233, 514, 792, 1800, 1948
LmnI	GCTCC	6 cut(s)	288, 620, 839, 1340, 1876, 2292
Lsp1109I	GCAGC	8 cut(s)	39, 128, 643, 735, 1470, 1571, 2069, 2239
LweI	GCATC	4 cut(s)	673, 702, 1390, 1657
MaeI	CTAG	5 cut(s)	782, 1526, 1710, 2109, 2184
MaeII	ACGT	5 cut(s)	1055, 1066, 1450, 2154, 2234
MaeIII	GTNAC	5 cut(s)	35, 146, 377, 463, 968
MalI	GATC	5 cut(s)	235, 516, 794, 1802, 1950
MboI	GATC	5 cut(s)	233, 514, 792, 1800, 1948
MboII	GAAGA	8 cut(s)	199, 202, 364, 668, 961, 1533, 1619, 2114
MfeI	CAATTG	1 cut(s)	2143
MhlI	GDGCHC	6 cut(s)	293, 757, 988, 1074, 1376, 1571
MlsI	TGGCCA	2 cut(s)	11, 699
MluNI	TGGCCA	2 cut(s)	11, 699
Mly113I	GGCGCC	1 cut(s)	19
MlyI	GAGTC	7 cut(s)	311, 374, 772, 809, 1775, 1855, 2032
MmeI	TCCRAC	2 cut(s)	879, 1824
Mox20I	TGGCCA	2 cut(s)	11, 699
Mph1103I	ATGCAT	1 cut(s)	1405
MscI	TGGCCA	2 cut(s)	11, 699
MseI	TTAA	9 cut(s)	105, 390, 1080, 1500, 1578, 1622, 1652, 1698, 2085
MslI	CAYNNNNRTG	3 cut(s)	834, 1191, 1895
Msp20I	TGGCCA	2 cut(s)	11, 699
MspA1I	CMGCKG	1 cut(s)	33
MspI	CCGG	5 cut(s)	5, 81, 1834, 1946, 1972
MspR9I	CCNGG	7 cut(s)	82, 256, 442, 1946, 1972, 2115, 2303
MunI	CAATTG	1 cut(s)	2143
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	4 cut(s)	256, 442, 2115, 2303
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	8 cut(s)	27, 57, 260, 732, 1295, 1304, 1409, 1610
NarI	GGCGCC	1 cut(s)	19
NciI	CCSGG	3 cut(s)	82, 1946, 1972
NdeI	CATATG	1 cut(s)	679
NdeII	GATC	5 cut(s)	233, 514, 792, 1800, 1948
NheI	GCTAGC	2 cut(s)	2108, 2183
NlaIII	CATG	7 cut(s)	154, 553, 630, 772, 1357, 2018, 2223
NlaIV	GGNNCC	6 cut(s)	20, 79, 182, 841, 880, 930
NmuCI	GTSAC	4 cut(s)	35, 377, 463, 968
NsiI	ATGCAT	1 cut(s)	1405
NspI	RCATGY	2 cut(s)	553, 2018
PaeR7I	CTCGAG	1 cut(s)	1863
PasI	CCCWGGG	1 cut(s)	2114
PciI	ACATGT	1 cut(s)	549
PcsI	WCGNNNNNNNCGW	1 cut(s)	748
PctI	GAATGC	1 cut(s)	1403
PfeI	GAWTC	7 cut(s)	485, 1021, 1259, 1357, 1847, 1923, 2044
PflMI	CCANNNNNTGG	1 cut(s)	774
PinAI	ACCGGT	1 cut(s)	1833
PleI	GAGTC	7 cut(s)	310, 374, 772, 809, 1775, 1855, 2031
PluTI	GGCGCC	1 cut(s)	22
PpsI	GAGTC	7 cut(s)	310, 374, 772, 809, 1775, 1855, 2031
PpuMI	RGGWCCY	1 cut(s)	929
PscI	ACATGT	1 cut(s)	549
PshBI	ATTAAT	1 cut(s)	105
Psp5II	RGGWCCY	1 cut(s)	929
Psp6I	CCWGG	4 cut(s)	254, 440, 2113, 2301
PspFI	CCCAGC	1 cut(s)	2336
PspGI	CCWGG	4 cut(s)	254, 440, 2113, 2301
PspN4I	GGNNCC	6 cut(s)	20, 79, 182, 841, 880, 930
PspPI	GGNCC	2 cut(s)	929, 1132
PspPPI	RGGWCCY	1 cut(s)	929
PspXI	VCTCGAGB	1 cut(s)	1863
PstI	CTGCAG	1 cut(s)	1789
PstNI	CAGNNNCTG	1 cut(s)	482
RsaI	GTAC	7 cut(s)	79, 548, 911, 1248, 1266, 1332, 2000
RsaNI	GTAC	7 cut(s)	78, 547, 910, 1247, 1265, 1331, 1999
RseI	CAYNNNNRTG	3 cut(s)	834, 1191, 1895
SacII	CCGCGG	1 cut(s)	34
SalI	GTCGAC	1 cut(s)	812
SaqAI	TTAA	9 cut(s)	105, 390, 1080, 1500, 1578, 1622, 1652, 1698, 2085
Sau3AI	GATC	5 cut(s)	233, 514, 792, 1800, 1948
Sau96I	GGNCC	2 cut(s)	929, 1132
SchI	GAGTC	7 cut(s)	311, 374, 772, 809, 1775, 1855, 2032
ScrFI	CCNGG	7 cut(s)	82, 256, 442, 1946, 1972, 2115, 2303
SduI	GDGCHC	6 cut(s)	293, 757, 988, 1074, 1376, 1571
SfaNI	GCATC	4 cut(s)	673, 702, 1390, 1657
SfcI	CTRYAG	1 cut(s)	1785
SfoI	GGCGCC	1 cut(s)	20
Sfr274I	CTCGAG	1 cut(s)	1863
Sfr303I	CCGCGG	1 cut(s)	34
SgrBI	CCGCGG	1 cut(s)	34
SinI	GGWCC	1 cut(s)	929
SlaI	CTCGAG	1 cut(s)	1863
SmiMI	CAYNNNNRTG	3 cut(s)	834, 1191, 1895
SmlI	CTYRAG	3 cut(s)	158, 395, 1863
SmoI	CTYRAG	3 cut(s)	158, 395, 1863
SpeI	ACTAGT	1 cut(s)	1525
SspDI	GGCGCC	1 cut(s)	18
SspI	AATATT	1 cut(s)	103
SspMI	CTAG	5 cut(s)	782, 1526, 1710, 2109, 2184
StyD4I	CCNGG	7 cut(s)	80, 254, 440, 1944, 1970, 2113, 2301
StyI	CCWWGG	3 cut(s)	648, 694, 932
TaaI	ACNGT	7 cut(s)	295, 869, 897, 914, 1046, 1244, 1641
TaiI	ACGT	5 cut(s)	1058, 1069, 1453, 2157, 2237
TaqI	TCGA	6 cut(s)	751, 813, 988, 1191, 1864, 2237
TatI	WGTACW	4 cut(s)	546, 1264, 1330, 1998
TauI	GCSGC	6 cut(s)	33, 60, 320, 440, 1464, 1596
TfiI	GAWTC	7 cut(s)	485, 1021, 1259, 1357, 1847, 1923, 2044
Tru1I	TTAA	9 cut(s)	105, 390, 1080, 1500, 1578, 1622, 1652, 1698, 2085
Tru9I	TTAA	9 cut(s)	105, 390, 1080, 1500, 1578, 1622, 1652, 1698, 2085
TscAI	CASTG	4 cut(s)	874, 1603, 1794, 2056
TseFI	GTSAC	4 cut(s)	35, 377, 463, 968
TseI	GCWGC	8 cut(s)	27, 141, 631, 723, 1458, 1559, 2057, 2252
Tsp45I	GTSAC	4 cut(s)	35, 377, 463, 968
TspDTI	ATGAA	7 cut(s)	360, 573, 669, 1119, 1470, 1707, 2177
TspRI	CASTG	4 cut(s)	874, 1603, 1794, 2056
Van91I	CCANNNNNTGG	1 cut(s)	774
VneI	GTGCAC	3 cut(s)	1070, 1372, 1567
VpaK11BI	GGWCC	1 cut(s)	929
VspI	ATTAAT	1 cut(s)	105
XapI	RAATTY	4 cut(s)	568, 1681, 2309, 2351
XbaI	TCTAGA	2 cut(s)	781, 1709
XceI	RCATGY	2 cut(s)	553, 2018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	872
XhoI	CTCGAG	1 cut(s)	1863
XmiI	GTMKAC	2 cut(s)	813, 1756
XspI	CTAG	5 cut(s)	782, 1526, 1710, 2109, 2184
Zsp2I	ATGCAT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.