FvH4_7g34220
ERF Family

RING FYVE PHD zinc finger superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000769
Physical Location & Seq
Reverse (-)
24150495 .. 24158694
8200 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g34220.t7

Sequence Viewer

Length: 3522 bp
ATGTGTCCAAAGTTTGAATCAGAGACCAGTGATGATGGCCAAGACCCAAAACAGGAAGCTTTGAAATGTTCAGGTCATGGTGAACAGGATATTAAATCTAGCGAGATGGTTGAAACAGCTGCTATGCAGCCTTTGCAATCAGTCAATGGTGATGACAGTGACGAATCAGACATTGTGGAGCATGATGTAAAGGTATGTGATATTTGTGGGGACGCCGGTCGTGAAGAACAGCTTGCCACGTGTAGTAGGTGTAGCGATGGTGCAGAACACATCTATTGCATGCGAAAAAAGCTTTGGAGAGTTCCTAAAGGTGATTGGTTTTGTGAGGAATGCAAGTTTGCTGAGCAAACTGAAAACCAAAAGCAAGATATATATGGAAACAGAACGAAGAAAGCCATCTTGAGCACACAGCTCTCTAATAAGAGACGTGCAGACAATACAGATGCGGCTCCTTCTTCGAAGAGGCAGACTCTTGAAACTCGGGTGGGATCACCAAAGCCATCCAGCCCTAAGAGAACAGTTGCATTATCACGTGAGTCTTCATTCAAGAGTATGGATAAGGATAAGTTGAAGTCTGATAAGTCTGCTTATCAGACTTCTACCACCACTAATGATGTATCAGAAACTGTACGCTCTCCAACAACCGGTCCTCGGCTTCAAACAGCCAAGGGTGCATTATTAAAGTCAAATTCTTTCAACATGTATTCCAAACCAAAGGTTAAGCCTGTAGACAACATTGTTCCTCAGAAGCAGAAGGGGTCTAAAGAGCACATTTCTGTTGATATGAAGGAGAGGACAGCCAGAATGATGGGCAAATCTGTGTCATTTAGATCTCCTGACTCGGGGCGGTCTAGTGTGCCCGATTCAAAAGTTAAAATGCTGCCGTCAAAATTTAACCCTCTTCAAGATCTAAAGGGAGTGAAACAAGTAAAAGAGAGGAGCACAGTTGAAAGAAAAAATTTGTCTAAACTAGAACGTCCTCTAGTTGGTTTGACCACATCCAGTGCTACTGTTTCAACACCTAAGGTCGACCAAGCATCCCATTTGCTTTCATCTGTGAGCAGCCTTCGAGAGCATAAGGCTTTACCATCTGATGGAAAATTAAGTACTTCATCAAAAGCAATAAGTGGTCTAACTCTTAAAGGTGTTGAAGCTCAAAGTTCTCCAGGTGGATCTTCTCCTACTAGTGGAATGTGTAGTGCTGCTTCTGAACAAAAGTCAAACCAAATTATCTCTAACAATGAACCTTCTGATGCTGAAGGGAAATCAGAAGATGTTCTTCGATCATGGGAAATGACAAATCAAACTGATAAAACAAGGGAGGGTTCTGTTTGCAGTAGGCCGATTGTTGCTGCCAGTCCAAAAGGTCTTTTCTGTTCAATTTGTAAGGAGATTGGTCATACTGCTGATTCATGCAAAAGCGGAATTTCACAGGATATTGGTACTGATGTTTCTCCTCCAACAAGCTACAGAGAGGAGGTGCCGAGAAGTAGTAGGTTGAAAGATGCAATTCAAGCTGCTTTGCTTCGAAAGCCTGAAATATACAGAAAGAAAACAGTACTAGAACAATGTGATGAGTTGTCCGTTTCCAACATGGAATCAAGTAATGAAGTAGCTCCTCCAGAGTGTGTATCAAACATGTTGAATAATTACATGTGTACTGAAGGATCGCATGATGGACAAGCGATTCCTGGGATTTCTACCTCTACTTCTGATTTTTACAAGAATACATTACACCCCGCTAATTCTGTGGTTCCTTCCAGGGTGGTAGACTCTGGTTCTGTTGTTCCTTTTCTTGGGAAGTCTACAATGAGAAATTTGCAGAGACATGCTTCAATGGGGATGTCGTTTCTTACGAAGACAACAGCCATTCCAGAATATGAACACATCTGGCAGGGGAGCTTTGAACTGCAAAGAGGTGGAAATATTCTGGATATATGTGGTGGTATTCAAGCTCATTTATCGACTTGTGCATCACCAAAAGTACTTGAAGTAGTGAACAAATTTCCGCACAAAGTTCCTTTGAAGGAAGTACCTCGTTTAAGTGTATGGCCAACGCAATTTCATCAAAGTGGTGTTAAAGAAGATAATATAGCACTCTATTTCTTTGCCAAAGATCTTGAGAGTTACGAAAGGAACTACAAGATCCTTATAGATGCAATGATCAAGAATGATTTAGCCCTCAAAGGAAAGTTTGGTGGCGTTGAACTTCTGATACTCCCATCAAATCAGCTTCCTGAGAAATCACAACGTTGGAATATGCTTTATTTCTTATGGGGTGTGTTCAGGGAGACAAGGGTGCATTACATAGACTCTACTAGAAAAGTGGATCTTCCTGATGTCTCATTGGACAATGACATTCCCACTGTCATGACTGTGGCCAAGAACCTGCATGTTCCCGAGCATATAGGTGTAGGTGATGGGTTGTCTGATGCAGCCTCTGCATCCAAGTCCCCAGAATCTCTGGTTTTGATGGTTAGCAAGGATCTTGATAGCAAATATATGTACCCCGAAGAGATGTGTCGCGGTTCAAAAGAGAACTCGGTGCTACAGGATAGCAGGGGTGACTGCGAATACACAGCATACAATGCAGATTTGTCTGGTGGAGTTACATGCACCACTCCTTCCCTGCAAGAAGTTTGCATTCGAGAGAGCAGACTAGACACTGCAAGGCATATTGGGAAGGACATAATTGCAGATAGAGAAAACATGATTGGTGTCTCAGGAGGTGACAAGGAGGAGGTGATTCTGGAAAAAGTGAATCACAGGGATGAATTTAAACAAGTGAGGGAACTGAAGAGAGATGATGGATCCAAAGAAACGGAAACAACTTTAGTGACAGACTTGACAACAAGAGTCAACTCTTGTCAGTCTAATTCTAGACATCCACTTATAGATCTGTCAGAGACAGCAGCTTCTTCCGCTACAAATCAAGAAATGCCGTGGAATGTGGTGAATACTATTCAAAGAGATGGACAGAGTGAGAGTAAGAAACCAAAACTAGATTCTAGTGAATTACATGGTTTTAGTACTTCAAAGTCTGTCACTTCTACTTCAGCTGAAGAGAAGAGCTGTACTGAAGAATGTGATGAAAAAGTTATTCCAGAGGACCTGGGAACTACTGAAAGGCATTTTTTTCCTGTGGAATCAAGGAATATCCAGGAATTTCGGATGGATAACTCTCTGCCTTGGAAAAATTTCTCATCAGGGAAAGAGGATAAGTCAGATGGGTTTCCGAGTCTTGAGCTTGCTCTCAGGGCGGAAACAAAATCACCAAGTAAAGGGAATCTGCCATTCTTTGTTGGGTTAGGTGATGAGAGAGATAACCAGGACAGGCATTTAGAAAAAACAGCAGGTGAGAAAGAAGATGATATCTCTGCTTCACTTTCACTCTCTCTTTCTTTCCCCTTCCCAGACGAGGAACAACCTGTGAAACCTGTTACAAAATCTGAGCAACTTGTGCCTGAAAGGCACCATGTGAATACATCGCTGCTTCTGTTTGGGCCCTTCCCAGAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHD

Protein Analysis

1174

Amino Acids

129.48

Weight (kDa)

5.98

Isoelectric Point (pI)

52.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPOC_AIPP2 PF23121 631 - 762 1.7e-50 AIPP2, SPOC-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000769)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02890 AT3G02890 AT3G02890 AT3G02890 AT5G16680 AT5G16680
fragaria_vesca FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220
malus_domestica MD01G1238900.v1.1 MD07G1310800.v1.1
prunus_persica Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1
pyrus_communis pycom01g24640 pycom07g28310
rosa_chinensis RchiOBHm_Chr1g0384581
rosa_laevigata RLG00000026030
rosa_multiflora Rmu_sc0006005.1_g000016
rosa_roxburghii Rroxscaffold_4G00276570
rosa_rugosa Rorug01G0449400 Rorug01G0449500
rosa_samantha Rh1AG474300 Rh1BG432300 Rh1CG445500 Rh1DG464900
rosa_wichuraiana Rw1G039830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3344
Acc36I ACCTGC 2 cut(s) 2397, 3344
AccB1I GGYRCC 2 cut(s) 1480, 3471
AccB7I CCANNNNNTGG 1 cut(s) 1094
AccI GTMKAC 4 cut(s) 729, 1029, 1770, 1805
AccII CGCG 1 cut(s) 2526
AciI CCGC 8 cut(s) 446, 847, 1422, 1740, 2009, 2526, 2922, 3260
AclI AACGTT 1 cut(s) 2251
AclWI GGATC 8 cut(s) 496, 1180, 1675, 2140, 2337, 2493, 2805, 2818
AcoI YGGCCR 3 cut(s) 37, 2051, 2379
AcsI RAATTY 9 cut(s) 688, 890, 958, 1425, 1816, 2003, 2774, 3164, 3196
AcuI CTGAAG 6 cut(s) 1278, 1683, 2816, 3039, 3081, 3099
AcvI CACGTG 2 cut(s) 240, 533
AcyI GRCGYC 1 cut(s) 213
AdeI CACNNNGTG 1 cut(s) 3478
AflIII ACRYGT 4 cut(s) 239, 699, 1638, 1653
AgeI ACCGGT 1 cut(s) 644
AhlI ACTAGT 1 cut(s) 1184
AjiI CACGTC 1 cut(s) 428
AjnI CCWGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
AjuI GAANNNNNNNTTGG 6 cut(s) 277, 309, 2697, 2729, 2989, 3021
Alw21I GWGCWC 3 cut(s) 407, 771, 944
Alw26I GTCTC 7 cut(s) 17, 418, 1819, 2285, 2347, 2725, 2900
AlwI GGATC 8 cut(s) 496, 1180, 1675, 2140, 2337, 2493, 2805, 2818
AlwNI CAGNNNCTG 2 cut(s) 626, 2441
Ama87I CYCGRG 3 cut(s) 480, 841, 2399
AoxI GGCC 5 cut(s) 37, 1340, 2051, 2379, 3503
ApaI GGGCCC 1 cut(s) 3507
ApoI RAATTY 9 cut(s) 688, 890, 958, 1425, 1816, 2003, 2774, 3164, 3196
AsiGI ACCGGT 1 cut(s) 644
Asp700I GAANNNNTTC 2 cut(s) 1275, 3197
AspS9I GGNCC 4 cut(s) 647, 3109, 3503, 3504
AsuII TTCGAA 2 cut(s) 458, 1528
AvaI CYCGRG 3 cut(s) 480, 841, 2399
AvaII GGWCC 2 cut(s) 647, 3109
AxyI CCTNAGG 1 cut(s) 1023
BaeGI GKGCMC 2 cut(s) 861, 3507
BaeI ACNNNNGTAYC 2 cut(s) 1434, 1467
BalI TGGCCA 3 cut(s) 39, 2053, 2381
BamHI GGATCC 1 cut(s) 2810
BanI GGYRCC 2 cut(s) 1480, 3471
BanII GRGCYC 1 cut(s) 3507
BarI GAAGNNNNNNTAC 2 cut(s) 1189, 1221
BbrPI CACGTG 2 cut(s) 240, 533
BbsI GAAGAC 2 cut(s) 531, 1865
Bbv12I GWGCWC 3 cut(s) 407, 771, 944
BceAI ACGGC 2 cut(s) 868, 2926
BciT130I CCWGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
BclI TGATCA 1 cut(s) 2163
BcoDI GTCTC 7 cut(s) 17, 418, 1819, 2285, 2347, 2725, 2900
BcuI ACTAGT 1 cut(s) 1184
BfmI CTRYAG 3 cut(s) 726, 1468, 2549
BfuAI ACCTGC 2 cut(s) 2397, 3344
BglI GCCNNNNNGGC 1 cut(s) 3469
BglII AGATCT 4 cut(s) 830, 907, 2116, 2896
BlpI GCTNAGC 1 cut(s) 342
BmcAI AGTACT 4 cut(s) 1108, 1560, 1986, 3031
Bme1390I CCNGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
Bme18I GGWCC 2 cut(s) 647, 3109
BmeT110I CYCGRG 3 cut(s) 480, 841, 2399
BmgBI CACGTC 1 cut(s) 428
BmgT120I GGNCC 4 cut(s) 647, 3109, 3503, 3504
BmiI GGNNCC 6 cut(s) 450, 1482, 1755, 2812, 3473, 3505
BmrFI CCNGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
BmsI GCATC 8 cut(s) 433, 1046, 1243, 1495, 1982, 2146, 2422, 2453
BoxI GACNNNNGTC 1 cut(s) 216
BpiI GAAGAC 2 cut(s) 531, 1865
BplI GAGNNNNNCTC 2 cut(s) 454, 486
BpmI CTGGAG 2 cut(s) 1149, 1605
Bpu1102I GCTNAGC 1 cut(s) 342
Bpu14I TTCGAA 2 cut(s) 458, 1528
BpuEI CTTGAG 3 cut(s) 421, 2141, 3263
BsaAI YACGTR 2 cut(s) 240, 533
BsaHI GRCGYC 1 cut(s) 213
BsaI GGTCTC 1 cut(s) 17
BsaJI CCNNGG 7 cut(s) 650, 666, 1691, 1761, 2942, 3112, 3188
BsaWI WCCGGW 1 cut(s) 644
Bse118I RCCGGY 2 cut(s) 215, 644
Bse1I ACTGG 3 cut(s) 27, 1002, 1356
Bse21I CCTNAGG 1 cut(s) 1023
Bse3DI GCAATG 1 cut(s) 2166
BseBI CCWGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
BseDI CCNNGG 7 cut(s) 650, 666, 1691, 1761, 2942, 3112, 3188
BseGI GGATG 8 cut(s) 500, 998, 1037, 1848, 2444, 2776, 2884, 3177
BseMI GCAATG 1 cut(s) 2166
BseMII CTCAG 6 cut(s) 333, 758, 2229, 2736, 3268, 3441
BseNI ACTGG 3 cut(s) 27, 1002, 1356
BseRI GAGGAG 5 cut(s) 952, 1446, 1490, 1608, 2753
BseSI GKGCMC 2 cut(s) 861, 3507
BsgI GTGCAG 2 cut(s) 282, 450
Bsh1236I CGCG 1 cut(s) 2526
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 5 cut(s) 39, 1342, 2053, 2381, 3505
BshNI GGYRCC 2 cut(s) 1480, 3471
BshTI ACCGGT 1 cut(s) 644
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 3 cut(s) 407, 771, 944
BsiHKCI CYCGRG 3 cut(s) 480, 841, 2399
BsiSI CCGG 2 cut(s) 216, 645
BslFI GGGAC 2 cut(s) 224, 2437
BsmAI GTCTC 7 cut(s) 17, 418, 1819, 2285, 2347, 2725, 2900
BsmBI CGTCTC 1 cut(s) 418
BsmFI GGGAC 2 cut(s) 224, 2437
BsmI GAATGC 2 cut(s) 335, 2643
BsnI GGCC 5 cut(s) 39, 1342, 2053, 2381, 3505
Bso31I GGTCTC 1 cut(s) 17
BsoBI CYCGRG 3 cut(s) 480, 841, 2399
Bsp119I TTCGAA 2 cut(s) 458, 1528
Bsp120I GGGCCC 1 cut(s) 3503
Bsp1286I GDGCHC 5 cut(s) 407, 771, 861, 944, 3507
Bsp1720I GCTNAGC 1 cut(s) 342
BspACI CCGC 8 cut(s) 446, 847, 1422, 1740, 2009, 2526, 2922, 3260
BspANI GGCC 5 cut(s) 39, 1342, 2053, 2381, 3505
BspCNI CTCAG 6 cut(s) 334, 757, 2230, 2735, 3267, 3442
BspFNI CGCG 1 cut(s) 2526
BspHI TCATGA 1 cut(s) 2370
BspLI GGNNCC 6 cut(s) 450, 1482, 1755, 2812, 3473, 3505
BspMI ACCTGC 2 cut(s) 2397, 3344
BspPI GGATC 8 cut(s) 496, 1180, 1675, 2140, 2337, 2493, 2805, 2818
BspQI GCTCTTC 1 cut(s) 3062
BspT104I TTCGAA 2 cut(s) 458, 1528
BspT107I GGYRCC 2 cut(s) 1480, 3471
BspTNI GGTCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 2166
BsrFI RCCGGY 2 cut(s) 215, 644
BsrI ACTGG 3 cut(s) 27, 1002, 1356
BssAI RCCGGY 2 cut(s) 215, 644
BssECI CCNNGG 7 cut(s) 650, 666, 1691, 1761, 2942, 3112, 3188
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 2 cut(s) 666, 3188
Bst2UI CCWGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
Bst4CI ACNGT 8 cut(s) 158, 520, 628, 946, 1012, 1558, 2368, 2377
Bst6I CTCTTC 6 cut(s) 455, 906, 2508, 2792, 3057, 3062
BstACI GRCGYC 1 cut(s) 213
BstAPI GCANNNNNTGC 4 cut(s) 133, 2441, 2588, 3460
BstBAI YACGTR 2 cut(s) 240, 533
BstBI TTCGAA 2 cut(s) 458, 1528
BstC8I GCNNGC 3 cut(s) 234, 281, 3249
BstDEI CTNAG 8 cut(s) 342, 510, 744, 1023, 2238, 2722, 3254, 3450
BstDSI CCRYGG 1 cut(s) 2942
BstF5I GGATG 8 cut(s) 500, 998, 1037, 1848, 2444, 2776, 2884, 3177
BstFNI CGCG 1 cut(s) 2526
BstMAI GTCTC 7 cut(s) 17, 418, 1819, 2285, 2347, 2725, 2900
BstMCI CGRYCG 1 cut(s) 220
BstNI CCWGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
BstNSI RCATGY 7 cut(s) 283, 703, 1642, 1657, 1832, 2396, 2616
BstPAI GACNNNNGTC 1 cut(s) 216
BstSCI CCNGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
BstSFI CTRYAG 3 cut(s) 726, 1468, 2549
BstSLI GKGCMC 2 cut(s) 861, 3507
BstUI CGCG 1 cut(s) 2526
BstV2I GAAGAC 2 cut(s) 531, 1865
BstX2I RGATCY 9 cut(s) 830, 907, 1172, 2116, 2145, 2329, 2485, 2810, 2896
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 9 cut(s) 830, 907, 1172, 2116, 2145, 2329, 2485, 2810, 2896
Bsu36I CCTNAGG 1 cut(s) 1023
BsuRI GGCC 5 cut(s) 39, 1342, 2053, 2381, 3505
BtgI CCRYGG 1 cut(s) 2942
BtgZI GCGATG 2 cut(s) 270, 3471
BtrI CACGTC 1 cut(s) 428
BtsCI GGATG 8 cut(s) 500, 998, 1037, 1848, 2444, 2776, 2884, 3177
BtsI GCAGTG 1 cut(s) 2664
BtsIMutI CAGTG 5 cut(s) 34, 163, 1009, 2364, 2664
BveI ACCTGC 2 cut(s) 2397, 3344
Cac8I GCNNGC 3 cut(s) 234, 281, 3249
CaiI CAGNNNCTG 2 cut(s) 626, 2441
CciI TCATGA 1 cut(s) 2370
Cfr10I RCCGGY 2 cut(s) 215, 644
Cfr13I GGNCC 4 cut(s) 647, 3109, 3503, 3504
CseI GACGC 1 cut(s) 221
CspAI ACCGGT 1 cut(s) 644
DdeI CTNAG 8 cut(s) 342, 510, 744, 1023, 2238, 2722, 3254, 3450
DraI TTTAAA 1 cut(s) 2779
DraIII CACNNNGTG 1 cut(s) 3478
EaeI YGGCCR 3 cut(s) 37, 2051, 2379
Eam1104I CTCTTC 6 cut(s) 455, 906, 2508, 2792, 3057, 3062
EarI CTCTTC 6 cut(s) 455, 906, 2508, 2792, 3057, 3062
EciI GGCGGA 1 cut(s) 3275
Eco130I CCWWGG 2 cut(s) 666, 3188
Eco24I GRGCYC 1 cut(s) 3507
Eco31I GGTCTC 1 cut(s) 17
Eco32I GATATC 1 cut(s) 3373
Eco47I GGWCC 2 cut(s) 647, 3109
Eco57I CTGAAG 6 cut(s) 1278, 1683, 2816, 3039, 3081, 3099
Eco72I CACGTG 2 cut(s) 240, 533
Eco81I CCTNAGG 1 cut(s) 1023
Eco88I CYCGRG 3 cut(s) 480, 841, 2399
EcoO109I RGGNCCY 2 cut(s) 3109, 3504
EcoRII CCWGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
EcoRV GATATC 1 cut(s) 3373
EcoT14I CCWWGG 2 cut(s) 666, 3188
EcoT38I GRGCYC 1 cut(s) 3507
ErhI CCWWGG 2 cut(s) 666, 3188
Esp3I CGTCTC 1 cut(s) 418
FalI AAGNNNNNCTT 6 cut(s) 216, 248, 1263, 1295, 2316, 2348
FaqI GGGAC 2 cut(s) 224, 2437
FauI CCCGC 1 cut(s) 1747
FbaI TGATCA 1 cut(s) 2163
FblI GTMKAC 4 cut(s) 729, 1029, 1770, 1805
FokI GGATG 8 cut(s) 487, 985, 1024, 1855, 2431, 2783, 2871, 3184
FriOI GRGCYC 1 cut(s) 3507
GsuI CTGGAG 2 cut(s) 1149, 1605
HaeIII GGCC 5 cut(s) 39, 1342, 2053, 2381, 3505
HapII CCGG 2 cut(s) 216, 645
HgaI GACGC 1 cut(s) 221
Hin1I GRCGYC 1 cut(s) 213
HincII GTYRAC 2 cut(s) 1030, 2860
HindII GTYRAC 2 cut(s) 1030, 2860
HindIII AAGCTT 2 cut(s) 57, 290
HpaII CCGG 2 cut(s) 216, 645
Hpy166II GTNNAC 8 cut(s) 83, 730, 1030, 1659, 1771, 1806, 1999, 2860
Hpy8I GTNNAC 8 cut(s) 83, 730, 1030, 1659, 1771, 1806, 1999, 2860
HpyCH4III ACNGT 8 cut(s) 158, 520, 628, 946, 1012, 1558, 2368, 2377
HpyCH4IV ACGT 5 cut(s) 239, 427, 532, 976, 2251
HpyF3I CTNAG 8 cut(s) 342, 510, 744, 1023, 2238, 2722, 3254, 3450
HpySE526I ACGT 5 cut(s) 239, 427, 532, 976, 2251
Hsp92I GRCGYC 1 cut(s) 213
Ksp22I TGATCA 1 cut(s) 2163
LguI GCTCTTC 1 cut(s) 3062
LmnI GCTCC 5 cut(s) 178, 454, 939, 1621, 1899
LweI GCATC 8 cut(s) 433, 1046, 1243, 1495, 1982, 2146, 2422, 2453
MaeII ACGT 5 cut(s) 239, 427, 532, 976, 2251
MaeIII GTNAC 8 cut(s) 158, 2126, 2564, 2608, 2729, 2836, 3043, 3439
MflI RGATCY 9 cut(s) 830, 907, 1172, 2116, 2145, 2329, 2485, 2810, 2896
MhlI GDGCHC 5 cut(s) 407, 771, 861, 944, 3507
MlsI TGGCCA 3 cut(s) 39, 2053, 2381
MluNI TGGCCA 3 cut(s) 39, 2053, 2381
MlyI GAGTC 7 cut(s) 463, 545, 833, 1766, 2306, 2865, 3247
MmeI TCCRAC 4 cut(s) 662, 1484, 1614, 2234
Mox20I TGGCCA 3 cut(s) 39, 2053, 2381
MroXI GAANNNNTTC 2 cut(s) 1275, 3197
MscI TGGCCA 3 cut(s) 39, 2053, 2381
MslI CAYNNNNRTG 5 cut(s) 2070, 2369, 2375, 2409, 2769
Msp20I TGGCCA 3 cut(s) 39, 2053, 2381
MspA1I CMGCKG 2 cut(s) 119, 3059
MspI CCGG 2 cut(s) 216, 645
MspR9I CCNGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
Mva1269I GAATGC 2 cut(s) 335, 2643
MvaI CCWGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
MvnI CGCG 1 cut(s) 2526
NlaIV GGNNCC 6 cut(s) 450, 1482, 1755, 2812, 3473, 3505
NmeAIII GCCGAG 2 cut(s) 631, 1509
NmuCI GTSAC 5 cut(s) 158, 2564, 2729, 2836, 3043
NspI RCATGY 7 cut(s) 283, 703, 1642, 1657, 1832, 2396, 2616
NspV TTCGAA 2 cut(s) 458, 1528
PaeI GCATGC 1 cut(s) 283
PagI TCATGA 1 cut(s) 2370
PaqCI CACCTGC 1 cut(s) 3344
PciI ACATGT 3 cut(s) 699, 1638, 1653
PciSI GCTCTTC 1 cut(s) 3062
PcsI WCGNNNNNNNCGW 1 cut(s) 1853
PctI GAATGC 2 cut(s) 335, 2643
PdmI GAANNNNTTC 2 cut(s) 1275, 3197
PflMI CCANNNNNTGG 1 cut(s) 1094
PfoI TCCNGGA 1 cut(s) 3159
PinAI ACCGGT 1 cut(s) 644
PleI GAGTC 7 cut(s) 463, 544, 833, 1766, 2306, 2864, 3246
PmaCI CACGTG 2 cut(s) 240, 533
PmlI CACGTG 2 cut(s) 240, 533
PpsI GAGTC 7 cut(s) 463, 544, 833, 1766, 2306, 2864, 3246
Ppu21I YACGTR 2 cut(s) 240, 533
PpuMI RGGWCCY 1 cut(s) 3109
PscI ACATGT 3 cut(s) 699, 1638, 1653
PshAI GACNNNNGTC 1 cut(s) 216
Psp1406I AACGTT 1 cut(s) 2251
Psp5II RGGWCCY 1 cut(s) 3109
Psp6I CCWGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
PspCI CACGTG 2 cut(s) 240, 533
PspGI CCWGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
PspN4I GGNNCC 6 cut(s) 450, 1482, 1755, 2812, 3473, 3505
PspOMI GGGCCC 1 cut(s) 3503
PspPI GGNCC 4 cut(s) 647, 3109, 3503, 3504
PspPPI RGGWCCY 1 cut(s) 3109
PsrI GAACNNNNNNTAC 2 cut(s) 2199, 2231
PstNI CAGNNNCTG 2 cut(s) 626, 2441
PsuI RGATCY 9 cut(s) 830, 907, 1172, 2116, 2145, 2329, 2485, 2810, 2896
PvuII CAGCTG 2 cut(s) 119, 3059
RseI CAYNNNNRTG 5 cut(s) 2070, 2369, 2375, 2409, 2769
SalI GTCGAC 1 cut(s) 1028
SapI GCTCTTC 1 cut(s) 3062
Sau96I GGNCC 4 cut(s) 647, 3109, 3503, 3504
ScaI AGTACT 4 cut(s) 1108, 1560, 1986, 3031
SchI GAGTC 7 cut(s) 463, 545, 833, 1766, 2306, 2865, 3247
ScrFI CCNGG 6 cut(s) 1167, 1692, 1762, 3113, 3161, 3329
SduI GDGCHC 5 cut(s) 407, 771, 861, 944, 3507
SfaNI GCATC 8 cut(s) 433, 1046, 1243, 1495, 1982, 2146, 2422, 2453
SfcI CTRYAG 3 cut(s) 726, 1468, 2549
SfuI TTCGAA 2 cut(s) 458, 1528
SinI GGWCC 2 cut(s) 647, 3109
SmiMI CAYNNNNRTG 5 cut(s) 2070, 2369, 2375, 2409, 2769
SmlI CTYRAG 3 cut(s) 400, 2120, 3242
SmoI CTYRAG 3 cut(s) 400, 2120, 3242
SpeI ACTAGT 1 cut(s) 1184
SphI GCATGC 1 cut(s) 283
SsiI CCGC 8 cut(s) 446, 847, 1422, 1740, 2009, 2526, 2922, 3260
SspI AATATT 1 cut(s) 1927
StyD4I CCNGG 6 cut(s) 1165, 1690, 1760, 3111, 3159, 3327
StyI CCWWGG 2 cut(s) 666, 3188
TaaI ACNGT 8 cut(s) 158, 520, 628, 946, 1012, 1558, 2368, 2377
TaiI ACGT 5 cut(s) 242, 430, 535, 979, 2254
TaqI TCGA 7 cut(s) 458, 1029, 1069, 1282, 1528, 1964, 2647
TatI WGTACW 6 cut(s) 1106, 1558, 1658, 1984, 3029, 3074
TauI GCSGC 1 cut(s) 449
TscAI CASTG 5 cut(s) 34, 163, 1009, 2371, 2671
TseFI GTSAC 5 cut(s) 158, 2564, 2729, 2836, 3043
Tsp45I GTSAC 5 cut(s) 158, 2564, 2729, 2836, 3043
TspGWI ACGGA 2 cut(s) 1573, 2837
TspRI CASTG 5 cut(s) 34, 163, 1009, 2371, 2671
Van91I CCANNNNNTGG 1 cut(s) 1094
VpaK11BI GGWCC 2 cut(s) 647, 3109
XapI RAATTY 9 cut(s) 688, 890, 958, 1425, 1816, 2003, 2774, 3164, 3196
XbaI TCTAGA 1 cut(s) 2879
XceI RCATGY 7 cut(s) 283, 703, 1642, 1657, 1832, 2396, 2616
XmiI GTMKAC 4 cut(s) 729, 1029, 1770, 1805
XmnI GAANNNNTTC 2 cut(s) 1275, 3197
ZrmI AGTACT 4 cut(s) 1108, 1560, 1986, 3031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.