Prupe.2G329000_v2.0.a1
ERF Family

RING FYVE PHD zinc finger superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000769
Physical Location & Seq
Reverse (-)
30218646 .. 30228126
9481 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G329000.20

Sequence Viewer

Length: 4665 bp
ATGATGTCCTGCCGGAAGGAACGGGCAGTCGATGAGCTTTACACCGCCACGCGGATTGTTATGAAACCAGAGATCACACCAGTCTTGAGAGGGAGTCATCGTATGCAAGGGCCTGCTGATGAGACTGATCATGATATTAAGAAGAATATGGTGTCATCTCAATCTATAAAAGAATTTGGTAAGCATTCTATGAGTCGGAAAGTTCATATGAGAGGCGAGTCTGGGGCTTGTAACCTGTGTTCTGCTCCCTGTTCATCTTGTGTGCATTTTAATAGAGCTCTTATGGGGTCAAAGGCTGATGAATTTTCTGATGAAACCTGTCGTGTTAATGCGGCTAGTCAATATTCTATCAATGTGGGCGATACTTCAGCCTCTTTTAAGAGCAAGGCATGTGACAGTTTACAACATACCACCAGTGAGACTAGTAACCTACTTAGTGTTAATTCAAGTCATGATTCTTTGTCTGAAAATGCTGAAAGCAAAGCACCCATAAGGTCTTCTGATACATCTGATGCTGTAGAAGGTTTTGAGATGCTTACAAATACGTTTGAGGATTCAAAAGTTGTTGAAGTCAATGACGATAACATTTCATGTATAAGTAGAGTCAATGATGCAAATTTAGCAGTCAATCACCATAACAGAAATGTAGAACGGAAGAATTTGTCTTGTAGTTTTGCTTCAGTTGGTAGTGTAGATCCAGAAGAAGTTGAAAAGGCACACAAGTCAGTCTTGTCAGAGATGGTAAAAGCTGCAGATGCTGGTGATAGTGCAACAAAGGGAAAACTGCCAGAATGCTCTGGGAATATGGATTCATCATTAATAAAAGAGTCACCATCTGATATTGTCGCTCGCCAGAAATTTGATTCTAATAAAGGTTTGGGGGCCTCTACAAAAATCTGTCCGAAGAAAGAAGTAGAGACCAATGGTAATGGCCAAGACCTAAATGATGAAGCTTTGAAATGTTTGGATCATGGTGAACAAGATGTGAAGTCTAATGAGTTGGTCGCAGTAGCTGAGAAGCAGCCCTTGCAATCTGCTTCTGGAGATGACAGTGATGAATCGGACATTGTGGAGCATGATGTAAAAGTATGCGATATTTGTGGGGATGCAGGTCGCGAAGATATGCTTGCCATGTGTAGTAGGTGCAGCGATGGTGCAGAACACATCTATTGCATGCGAAAGATGCTTCGGAGAGTTCCTAAAGGTCAATGGCTGTGTGAGGAATGCAAGTTTGCTGAGGAAGCTGACAACCAGAAGCAAGGTTCAGATATGGAGGGGAAAAAAATGGACAAAGCCATTTTGAGTACACAATTCTCTAATAAGAGACTAGCAGAAAATATAGAAGTAGCTCCTGCTGCGAAAAGGCAGGCTCTTGAAATTCGTGTGGGATCACCAAGGCCATCCAGCCCTAAGAGAATGGGTGCTCTATCACGTGAGTCTTCGTTCAAGAGCATAGATAAGGAAAGATTGAGGTCAACTTATCAGAGCTCACAGTCCATTAATGATATATCAGAAACTGCACGCTCTCCTTCTAGTGGTATACGGCTTCAAACAACCAAGGGTACATTGTTAAAGTCAAATTCATTCAACACCTTGACTTCCAAACCAAGAGTTAAGACTGTAGATGATGTTCCTCAAAAGCAAAAGGGATCTAAAGAACATTCTTCCCTTGATATGAAGGAGAGGGTGGCCAGAATGATGGGCAAATCTGTGTCATTCAAATCTGCGAACTCAGGGCGTTCAAATGTGTCTGAATCCAAAGTTAAAATGCTTTCATCTAAATTTAGCCATGTTCAAGATCTAAAAGGATTGAAACAAGCAAAAGAGCGGAGCACAATTGAAAGAAAAAATTTGTCCAAACTGGACCGCCCCCTTGCTAGTTTTCCCGCAGCTAGTCCTATTGTTTCAACACCTAAGATTGACCCAGCATCTCGTGGTGAAACTAGTTTGCTTTCATCTGTGAGCAACAATCGAGAGTCAAAGGTCGTATTACCTGATGGAAAATTAAGTACCGTAACAAAATCTATTGGTAATCTGACTCGTAAAGGTGTTGAGCCTCAAAATGCTTCAGTTGGAGGTTCATCTACGAATGGAATATGTAATTCTGCTTCTGAACAAAAGTCAAACCAAGTTAGCTCTAAGGATGAACCCTTATCCAGCTATTCTGGGATTGTTGAGAAACCATGCTCTAATGTTGACGAAACATTAGAAGATGCGTTCCCGCAATCAGTGGAAATGACAAGTCAGGCTGATAAAACCAGGGAGAGCTCTGCTCGCTGTAGGCCTACTGTTGCAGCTAGTCCAAAGTGTAAAGACATAGGTCATACTGCGGAATTTTGCAGAGTTGGCATTTCACAGACTTCTGGTACTGATGCTTCTACTCCAATAAGTTCTAGGGAGGATATGCCGAGAGGTAATAGGTTGAAAGATGCAATTCACGCGGCTTTGCTTAGAAAGCCTGAAATATACAGAAAAAAGAGAGTATTCGATCCATCTGATGAGTTGTCCACATCAAACGTGGACTTAAGTTATGAAGTAGCTTCTCAAGAGCAATCATTGATTTCAAATAAGTTGAATAATATCACGTGTAGTGAAGGATCACATGATGGACAAACAGTTCTTGGGACTTCTACTTCTGACTCTTACAAGAATACAACTGTCAATAATTTAAAGCAGCATACAGTGCAGCCCATTGATTCTGTGTTTCCTTCCAAAGTGACAGACTCTGTTTCTGTTGTTCCTTCTCTTGGAAAGTCTACAGTGAAAGATTTGCATAGTCATGCTTCAGTGGCGATGTATGTTCTTGCAAAGACAACAGCCATACCAGAATATGAATACATCTGGCAGGGGAGTTTCGAAGTGCAGAGAGGTGGAAATTATTTGGATTTATGTGGTGGAGTTCAAGCTCATTTGTCAACTTGTGCATCACCAAGGGTTCTTGAAGTGGTGAACAAATTTCAGTTCAAAGTTCCTCTGAGTGAAGTACCTCGCTTGAGTGTATGGCCATCACACTTCCATCAAAGTGGTGCTAAAGAAGATAACATTGCACTTTACTTCTTTGCCAAAGATCTTGAGAGTTACGAAAGAGACTACAAGATCCTGTTGGATGCTATGATCAAGAATGATCTAGCCCTCAAAGGGAATTTCGATGGTGTTGAACTTCTGATATTCCCATCAAATCAGCTTCCTGAGAGATCACAACGTTGGAATATGCTGTTTTTCCTATGGGGTGTTTTCAGGACAACGAGGGTGCATCGTTTGGATTTTACTAAGGAGACGTGTGTTCCCAGCTTGAGCAACTCATTGGATAAATATGGAACTTTGTCGGAGAACCTATGCATACCTAAGCATATAGATGAATTTTCTGCTTCTGACAAATGTCGTGATGTAGCATCTGCAGCCAATTCCCTTCTTCATATGGGTCCCACAGTTAGCAAGGATCATGTGAGCAAAGATACTTATCCTGAGGAGGTACGTTCAGGTTCAAAAGTGAGCTTGGTGGTACAGGATAGTAGGCTTGACTCCAACACAACAAAAAATGCAGGCTTGTCTGAAGGTGTTCCATGCACCGCTCCCCTGCAGCAGGAAATTTGCCTTCGAGGGAGCGGACTTGGCACAGAAATTAAATCTTCTATTCCAATAACTGGGTCAAATAGCTCCAACAAAGGTGAGAAGAGGCAAGTGCATTGGGTCACTTCTGGTGATAGAGAAGGTGCTGAGTATTTGAAGATTCGTCCTATTTCCAATCAAGAGGTAGCCATTGCTGGGAGTGTTGGTGAGGAGACAATTCCAGATAGAAAGAAAAGGGTTGGTCTCGCAGGAGGTGTTGAGGAGGTGATTCTGGATGGAGTAAACATAGAGAGTGTTGAATGTAAACAAGATAAGGAATTGAAGAGAGATTACGGATATAAGGAAATAGAAGCAGCTTTGGTGAGAGACTTGACAGCAGGAGTCAACTCTTTTCAGTCTAGTAAAAGAAAACATCCTCATATAGCTCTTTCAGAGACAGCAGCTTCTGCAGCCACGAATCAAGAAATGTCATGGAATGAGGTGAATAGTACACAGATAGATGGTGAGGGTGATAGTAAGAAGCCAAAAATTGGTTCAAGTGGATTGTATGGTTGTAGCACATCTAGAGGTACAAATGCTGTTGATGATGGTTTTGTCCCACATAATGATATGGGTCCTTGTTCTATGGTCGAGAAGAGATGCGTTGAAGCCTGTGAGGAGAAAGTTATTCCAGAGGACTTGGGAACTACTGAGAGATACTTTTTTCCTGTGGATTCACGGCATGTTCAGCATTTTCACACGGTTGAGAACTCTGTGCCTTGGAAAGGTTCCTCATCAGGAGATGAGGATAAGTCTCGTGATGGGTTCCCAAGTCTCGAGCTTGCTCTAGGGGCAGAAACAAAACCGCAAAATAAGGGAATCCTGCCCTTCTTTGTTGGATTAGCGGACGAGAAAAATAACCAGGATAAGCCTTTAGATGCCGTGGTGGATGAGAAAGATGATGATGCCTCTGCCTCCCTTTCCCTTTCCCTTTCATTCCCATTCCCGGACAAGGAACAGCCTGTGAAACCTGTTTCAAAATCGGAACAGCTTCTGCCTGAAAGGCATCATGTGAATACATCACTGCTTCTCTTTGGGCGCCTTCCAGACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHD

Protein Analysis

1555

Amino Acids

169.76

Weight (kDa)

6.14

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000769)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02890 AT3G02890 AT3G02890 AT3G02890 AT5G16680 AT5G16680
fragaria_vesca FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220
malus_domestica MD01G1238900.v1.1 MD07G1310800.v1.1
prunus_persica Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1
pyrus_communis pycom01g24640 pycom07g28310
rosa_chinensis RchiOBHm_Chr1g0384581
rosa_laevigata RLG00000026030
rosa_multiflora Rmu_sc0006005.1_g000016
rosa_roxburghii Rroxscaffold_4G00276570
rosa_rugosa Rorug01G0449400 Rorug01G0449500
rosa_samantha Rh1AG474300 Rh1BG432300 Rh1CG445500 Rh1DG464900
rosa_wichuraiana Rw1G039830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1100
AccB1I GGYRCC 1 cut(s) 4647
AccB7I CCANNNNNTGG 2 cut(s) 3644, 4100
AccBSI CCGCTC 3 cut(s) 1828, 3572, 3606
AccI GTMKAC 2 cut(s) 1540, 2756
AccII CGCG 3 cut(s) 52, 1116, 2441
AclI AACGTT 1 cut(s) 3202
AclWI GGATC 8 cut(s) 689, 975, 1396, 1657, 2483, 2605, 3091, 3447
AcoI YGGCCR 3 cut(s) 931, 1689, 3002
AcuI CTGAAG 5 cut(s) 351, 663, 2052, 2769, 3573
AcvI CACGTG 2 cut(s) 1433, 2586
AcyI GRCGYC 1 cut(s) 4648
AfaI GTAC 9 cut(s) 1306, 1564, 2011, 2368, 2985, 3474, 3504, 4060, 4141
AflII CTTAAG 1 cut(s) 2524
AflIII ACRYGT 2 cut(s) 2585, 3278
AhlI ACTAGT 2 cut(s) 422, 1943
AjiI CACGTC 1 cut(s) 3279
AjnI CCWGG 2 cut(s) 2258, 4470
AjuI GAANNNNNNNTTGG 2 cut(s) 4087, 4119
AloI GAACNNNNNNTCC 2 cut(s) 2601, 2633
Alw21I GWGCWC 5 cut(s) 280, 1426, 1490, 1835, 2270
AlwI GGATC 8 cut(s) 689, 975, 1396, 1657, 2483, 2605, 3091, 3447
AlwNI CAGNNNCTG 6 cut(s) 758, 1013, 1517, 2726, 4016, 4603
Ama87I CYCGRG 1 cut(s) 4385
AoxI GGCC 7 cut(s) 110, 882, 931, 1397, 1689, 2282, 3002
AseI ATTAAT 2 cut(s) 818, 1500
Asp700I GAANNNNTTC 2 cut(s) 3558, 4599
AspLEI GCGC 1 cut(s) 4650
AspS9I GGNCC 5 cut(s) 110, 882, 1864, 3422, 4184
AsuC2I CCSGG 1 cut(s) 4556
AsuII TTCGAA 1 cut(s) 2856
AvaI CYCGRG 1 cut(s) 4385
AvaII GGWCC 3 cut(s) 1864, 3422, 4184
AxyI CCTNAGG 1 cut(s) 3465
BalI TGGCCA 3 cut(s) 933, 1691, 3004
BanI GGYRCC 1 cut(s) 4647
BanII GRGCYC 3 cut(s) 280, 1490, 2270
BarI GAAGNNNNNNTAC 8 cut(s) 661, 693, 2092, 2124, 2359, 2391, 3884, 3916
BauI CACGAG 2 cut(s) 1932, 4365
BbrPI CACGTG 2 cut(s) 1433, 2586
BbsI GAAGAC 2 cut(s) 489, 1431
Bbv12I GWGCWC 5 cut(s) 280, 1426, 1490, 1835, 2270
BbvCI CCTCAGC 1 cut(s) 1236
BceAI ACGGC 3 cut(s) 1559, 4304, 4475
BciT130I CCWGG 2 cut(s) 2260, 4472
BclI TGATCA 2 cut(s) 127, 3114
BcnI CCSGG 1 cut(s) 4556
BcuI ACTAGT 2 cut(s) 422, 1943
BfmI CTRYAG 8 cut(s) 516, 750, 1620, 2278, 2757, 3396, 3578, 4017
BfoI RGCGCY 1 cut(s) 4651
BfrI CTTAAG 1 cut(s) 2524
BfuAI ACCTGC 1 cut(s) 1100
BglI GCCNNNNNGGC 1 cut(s) 4612
BglII AGATCT 2 cut(s) 1798, 3067
Bme1390I CCNGG 3 cut(s) 2260, 4472, 4556
Bme18I GGWCC 3 cut(s) 1864, 3422, 4184
BmeT110I CYCGRG 1 cut(s) 4385
BmgBI CACGTC 1 cut(s) 3279
BmgT120I GGNCC 5 cut(s) 110, 882, 1864, 3422, 4184
BmiI GGNNCC 7 cut(s) 883, 3423, 3424, 4185, 4339, 4376, 4649
BmrFI CCNGG 3 cut(s) 2260, 4472, 4556
BmrI ACTGGG 1 cut(s) 3654
BmuI ACTGGG 1 cut(s) 3654
BoxI GACNNNNGTC 2 cut(s) 2319, 3378
BpiI GAAGAC 2 cut(s) 489, 1431
BplI GAGNNNNNCTC 2 cut(s) 2257, 2289
BpmI CTGGAG 1 cut(s) 1062
Bpu10I CCTNAGC 2 cut(s) 1236, 3345
Bpu14I TTCGAA 1 cut(s) 2856
BpuEI CTTGAG 5 cut(s) 106, 2529, 3013, 3092, 3313
BpuMI CCSGG 1 cut(s) 4556
BsaAI YACGTR 2 cut(s) 1433, 2586
BsaBI GATNNNNATC 1 cut(s) 3459
BsaHI GRCGYC 1 cut(s) 4648
BsaI GGTCTC 2 cut(s) 911, 3818
BsaJI CCNNGG 6 cut(s) 1394, 1557, 2259, 2930, 4328, 4491
BsaXI ACNNNNNCTCC 4 cut(s) 85, 115, 3760, 3790
Bse1I ACTGG 4 cut(s) 80, 414, 1866, 3649
Bse21I CCTNAGG 1 cut(s) 3465
Bse3DI GCAATG 2 cut(s) 3042, 3759
Bse8I GATNNNNATC 1 cut(s) 3459
BseBI CCWGG 2 cut(s) 2260, 4472
BseDI CCNNGG 6 cut(s) 1394, 1557, 2259, 2930, 4328, 4491
BseGI GGATG 7 cut(s) 1111, 1400, 2149, 3112, 3850, 3982, 4504
BseJI GATNNNNATC 1 cut(s) 3459
BseMI GCAATG 2 cut(s) 3042, 3759
BseMII CTCAG 8 cut(s) 1005, 1227, 1746, 2966, 3180, 3456, 3708, 4251
BseNI ACTGG 4 cut(s) 80, 414, 1866, 3649
BseRI GAGGAG 4 cut(s) 3482, 3794, 3845, 4241
BseYI CCCAGC 3 cut(s) 1924, 3287, 3764
BsgI GTGCAG 5 cut(s) 1165, 1176, 1503, 2705, 2882
Bsh1236I CGCG 3 cut(s) 52, 1116, 2441
BshFI GGCC 7 cut(s) 112, 884, 933, 1399, 1691, 2284, 3004
BshNI GGYRCC 1 cut(s) 4647
BsiHKAI GWGCWC 5 cut(s) 280, 1426, 1490, 1835, 2270
BsiHKCI CYCGRG 1 cut(s) 4385
BsiSI CCGG 2 cut(s) 13, 4556
BslFI GGGAC 3 cut(s) 2638, 3408, 4151
BsmBI CGTCTC 1 cut(s) 3269
BsmFI GGGAC 3 cut(s) 2638, 3408, 4151
BsmI GAATGC 3 cut(s) 184, 797, 1229
BsnI GGCC 7 cut(s) 112, 884, 933, 1399, 1691, 2284, 3004
Bso31I GGTCTC 2 cut(s) 911, 3818
BsoBI CYCGRG 1 cut(s) 4385
Bsp119I TTCGAA 1 cut(s) 2856
Bsp1286I GDGCHC 5 cut(s) 280, 1426, 1490, 1835, 2270
Bsp68I TCGCGA 1 cut(s) 1116
BspANI GGCC 7 cut(s) 112, 884, 933, 1399, 1691, 2284, 3004
BspCNI CTCAG 8 cut(s) 1006, 1228, 1745, 2967, 3181, 3457, 3709, 4252
BspFNI CGCG 3 cut(s) 52, 1116, 2441
BspHI TCATGA 2 cut(s) 130, 451
BspLI GGNNCC 7 cut(s) 883, 3423, 3424, 4185, 4339, 4376, 4649
BspMAI CTGCAG 4 cut(s) 754, 3400, 3582, 4021
BspMI ACCTGC 1 cut(s) 1100
BspPI GGATC 8 cut(s) 689, 975, 1396, 1657, 2483, 2605, 3091, 3447
BspT104I TTCGAA 1 cut(s) 2856
BspT107I GGYRCC 1 cut(s) 4647
BspTI CTTAAG 1 cut(s) 2524
BspTNI GGTCTC 2 cut(s) 911, 3818
BsrBI CCGCTC 3 cut(s) 1828, 3572, 3606
BsrDI GCAATG 2 cut(s) 3042, 3759
BsrI ACTGG 4 cut(s) 80, 414, 1866, 3649
BssECI CCNNGG 6 cut(s) 1394, 1557, 2259, 2930, 4328, 4491
BssNAI GTATAC 1 cut(s) 1541
BssNI GRCGYC 1 cut(s) 4648
BssSI CACGAG 2 cut(s) 1932, 4365
BssT1I CCWWGG 4 cut(s) 1394, 1557, 2930, 4328
Bst1107I GTATAC 1 cut(s) 1541
Bst2BI CACGAG 2 cut(s) 1932, 4365
Bst2UI CCWGG 2 cut(s) 2260, 4472
Bst6I CTCTTC 3 cut(s) 3668, 3887, 4199
BstACI GRCGYC 1 cut(s) 4648
BstAFI CTTAAG 1 cut(s) 2524
BstAPI GCANNNNNTGC 3 cut(s) 1027, 2683, 4016
BstBAI YACGTR 2 cut(s) 1433, 2586
BstBI TTCGAA 1 cut(s) 2856
BstC8I GCNNGC 9 cut(s) 114, 850, 1128, 1175, 1368, 1522, 2275, 3544, 4392
BstDSI CCRYGG 1 cut(s) 4491
BstENI CCTNNNNNAGG 2 cut(s) 3581, 4332
BstF5I GGATG 7 cut(s) 1111, 1400, 2149, 3112, 3850, 3982, 4504
BstFNI CGCG 3 cut(s) 52, 1116, 2441
BstH2I RGCGCY 1 cut(s) 4651
BstHHI GCGC 1 cut(s) 4650
BstNI CCWGG 2 cut(s) 2260, 4472
BstNSI RCATGY 3 cut(s) 393, 1177, 4295
BstPAI GACNNNNGTC 2 cut(s) 2319, 3378
BstSCI CCNGG 3 cut(s) 2258, 4470, 4554
BstSFI CTRYAG 8 cut(s) 516, 750, 1620, 2278, 2757, 3396, 3578, 4017
BstUI CGCG 3 cut(s) 52, 1116, 2441
BstV2I GAAGAC 2 cut(s) 489, 1431
BstX2I RGATCY 5 cut(s) 694, 1649, 1798, 3067, 3096
BstXI CCANNNNNNTGG 2 cut(s) 1699, 3023
BstYI RGATCY 5 cut(s) 694, 1649, 1798, 3067, 3096
BstZ17I GTATAC 1 cut(s) 1541
Bsu36I CCTNAGG 1 cut(s) 3465
BsuRI GGCC 7 cut(s) 112, 884, 933, 1399, 1691, 2284, 3004
BtgI CCRYGG 1 cut(s) 4491
BtgZI GCGATG 2 cut(s) 1164, 2807
BtrI CACGTC 1 cut(s) 3279
BtsCI GGATG 7 cut(s) 1111, 1400, 2149, 3112, 3850, 3982, 4504
BtsI GCAGTG 1 cut(s) 4631
BtsIMutI CAGTG 7 cut(s) 421, 1057, 2235, 2688, 2766, 2793, 4631
BtuMI TCGCGA 1 cut(s) 1116
BveI ACCTGC 1 cut(s) 1100
Cac8I GCNNGC 9 cut(s) 114, 850, 1128, 1175, 1368, 1522, 2275, 3544, 4392
CaiI CAGNNNCTG 6 cut(s) 758, 1013, 1517, 2726, 4016, 4603
CciI TCATGA 2 cut(s) 130, 451
CfoI GCGC 1 cut(s) 4650
Cfr13I GGNCC 5 cut(s) 110, 882, 1864, 3422, 4184
Csp6I GTAC 9 cut(s) 1305, 1563, 2010, 2367, 2984, 3473, 3503, 4059, 4140
CspCI CAANNNNNGTGG 2 cut(s) 37, 72
CviQI GTAC 9 cut(s) 1305, 1563, 2010, 2367, 2984, 3473, 3503, 4059, 4140
DinI GGCGCC 1 cut(s) 4649
DraI TTTAAA 1 cut(s) 2670
EaeI YGGCCR 3 cut(s) 931, 1689, 3002
Eam1104I CTCTTC 3 cut(s) 3668, 3887, 4199
EarI CTCTTC 3 cut(s) 3668, 3887, 4199
Ecl136II GAGCTC 3 cut(s) 278, 1488, 2268
Eco130I CCWWGG 4 cut(s) 1394, 1557, 2930, 4328
Eco147I AGGCCT 1 cut(s) 2284
Eco24I GRGCYC 3 cut(s) 280, 1490, 2270
Eco31I GGTCTC 2 cut(s) 911, 3818
Eco47I GGWCC 3 cut(s) 1864, 3422, 4184
Eco53kI GAGCTC 3 cut(s) 278, 1488, 2268
Eco57I CTGAAG 5 cut(s) 351, 663, 2052, 2769, 3573
Eco72I CACGTG 2 cut(s) 1433, 2586
Eco81I CCTNAGG 1 cut(s) 3465
Eco88I CYCGRG 1 cut(s) 4385
EcoICRI GAGCTC 3 cut(s) 278, 1488, 2268
EcoNI CCTNNNNNAGG 2 cut(s) 3581, 4332
EcoO109I RGGNCCY 4 cut(s) 110, 882, 3422, 4184
EcoRII CCWGG 2 cut(s) 2258, 4470
EcoT14I CCWWGG 4 cut(s) 1394, 1557, 2930, 4328
EcoT22I ATGCAT 1 cut(s) 3341
EcoT38I GRGCYC 3 cut(s) 280, 1490, 2270
EgeI GGCGCC 1 cut(s) 4649
EheI GGCGCC 1 cut(s) 4649
ErhI CCWWGG 4 cut(s) 1394, 1557, 2930, 4328
Esp3I CGTCTC 1 cut(s) 3269
FalI AAGNNNNNCTT 6 cut(s) 713, 745, 1010, 1042, 1110, 1142
FaqI GGGAC 3 cut(s) 2638, 3408, 4151
FauI CCCGC 2 cut(s) 1894, 2229
FauNDI CATATG 2 cut(s) 207, 3417
FbaI TGATCA 2 cut(s) 127, 3114
FblI GTMKAC 2 cut(s) 1540, 2756
FokI GGATG 7 cut(s) 1118, 1387, 2156, 3119, 3857, 3969, 4511
FriOI GRGCYC 3 cut(s) 280, 1490, 2270
GlaI GCGC 1 cut(s) 4649
GsaI CCCAGC 3 cut(s) 1928, 3291, 3768
GsuI CTGGAG 1 cut(s) 1062
HaeII RGCGCY 1 cut(s) 4651
HaeIII GGCC 7 cut(s) 112, 884, 933, 1399, 1691, 2284, 3004
HapII CCGG 2 cut(s) 13, 4556
HhaI GCGC 1 cut(s) 4650
Hin1I GRCGYC 1 cut(s) 4648
Hin6I GCGC 1 cut(s) 4648
HinP1I GCGC 1 cut(s) 4648
HincII GTYRAC 4 cut(s) 1476, 2197, 2916, 3955
HindII GTYRAC 4 cut(s) 1476, 2197, 2916, 3955
HindIII AAGCTT 1 cut(s) 951
HpaII CCGG 2 cut(s) 13, 4556
HpyCH4IV ACGT 7 cut(s) 545, 1432, 2517, 2585, 3202, 3278, 3475
HpySE526I ACGT 7 cut(s) 545, 1432, 2517, 2585, 3202, 3278, 3475
Hsp92I GRCGYC 1 cut(s) 4648
HspAI GCGC 1 cut(s) 4648
KasI GGCGCC 1 cut(s) 4647
KflI GGGWCCC 1 cut(s) 3422
Ksp22I TGATCA 2 cut(s) 127, 3114
LmnI GCTCC 7 cut(s) 250, 1072, 1354, 1830, 3577, 3603, 3662
MaeII ACGT 7 cut(s) 545, 1432, 2517, 2585, 3202, 3278, 3475
MaeIII GTNAC 8 cut(s) 230, 392, 425, 828, 2014, 2716, 3077, 3691
MbiI CCGCTC 3 cut(s) 1828, 3572, 3606
MfeI CAATTG 1 cut(s) 1836
MflI RGATCY 5 cut(s) 694, 1649, 1798, 3067, 3096
MhlI GDGCHC 5 cut(s) 280, 1426, 1490, 1835, 2270
MlsI TGGCCA 3 cut(s) 933, 1691, 3004
MluNI TGGCCA 3 cut(s) 933, 1691, 3004
Mly113I GGCGCC 1 cut(s) 4648
MmeI TCCRAC 8 cut(s) 176, 2053, 3084, 3185, 3306, 3549, 3684, 4426
Mox20I TGGCCA 3 cut(s) 933, 1691, 3004
Mph1103I ATGCAT 1 cut(s) 3341
MroXI GAANNNNTTC 2 cut(s) 3558, 4599
MscI TGGCCA 3 cut(s) 933, 1691, 3004
MslI CAYNNNNRTG 3 cut(s) 2778, 3021, 3354
Msp20I TGGCCA 3 cut(s) 933, 1691, 3004
MspCI CTTAAG 1 cut(s) 2524
MspI CCGG 2 cut(s) 13, 4556
MspR9I CCNGG 3 cut(s) 2260, 4472, 4556
MunI CAATTG 1 cut(s) 1836
Mva1269I GAATGC 3 cut(s) 184, 797, 1229
MvaI CCWGG 2 cut(s) 2260, 4472
MvnI CGCG 3 cut(s) 52, 1116, 2441
NarI GGCGCC 1 cut(s) 4648
NciI CCSGG 1 cut(s) 4556
NdeI CATATG 2 cut(s) 207, 3417
NlaIV GGNNCC 7 cut(s) 883, 3423, 3424, 4185, 4339, 4376, 4649
NmeAIII GCCGAG 1 cut(s) 2433
NmuCI GTSAC 4 cut(s) 392, 828, 2716, 3691
NruI TCGCGA 1 cut(s) 1116
NsiI ATGCAT 1 cut(s) 3341
NspI RCATGY 3 cut(s) 393, 1177, 4295
NspV TTCGAA 1 cut(s) 2856
PaeI GCATGC 1 cut(s) 1177
PaeR7I CTCGAG 1 cut(s) 4385
PagI TCATGA 2 cut(s) 130, 451
PceI AGGCCT 1 cut(s) 2284
PctI GAATGC 3 cut(s) 184, 797, 1229
PdmI GAANNNNTTC 2 cut(s) 3558, 4599
PflMI CCANNNNNTGG 2 cut(s) 3644, 4100
PfoI TCCNGGA 1 cut(s) 4554
PluTI GGCGCC 1 cut(s) 4651
PmaCI CACGTG 2 cut(s) 1433, 2586
PmlI CACGTG 2 cut(s) 1433, 2586
Ppu21I YACGTR 2 cut(s) 1433, 2586
PpuMI RGGWCCY 2 cut(s) 3422, 4184
PshAI GACNNNNGTC 2 cut(s) 2319, 3378
PshBI ATTAAT 2 cut(s) 818, 1500
Psp124BI GAGCTC 3 cut(s) 280, 1490, 2270
Psp1406I AACGTT 1 cut(s) 3202
Psp5II RGGWCCY 2 cut(s) 3422, 4184
Psp6I CCWGG 2 cut(s) 2258, 4470
PspCI CACGTG 2 cut(s) 1433, 2586
PspFI CCCAGC 3 cut(s) 1924, 3287, 3764
PspGI CCWGG 2 cut(s) 2258, 4470
PspN4I GGNNCC 7 cut(s) 883, 3423, 3424, 4185, 4339, 4376, 4649
PspPI GGNCC 5 cut(s) 110, 882, 1864, 3422, 4184
PspPPI RGGWCCY 2 cut(s) 3422, 4184
PsrI GAACNNNNNNTAC 4 cut(s) 223, 255, 1614, 1646
PstI CTGCAG 4 cut(s) 754, 3400, 3582, 4021
PstNI CAGNNNCTG 6 cut(s) 758, 1013, 1517, 2726, 4016, 4603
PsuI RGATCY 5 cut(s) 694, 1649, 1798, 3067, 3096
RruI TCGCGA 1 cut(s) 1116
RsaI GTAC 9 cut(s) 1306, 1564, 2011, 2368, 2985, 3474, 3504, 4060, 4141
RsaNI GTAC 9 cut(s) 1305, 1563, 2010, 2367, 2984, 3473, 3503, 4059, 4140
RseI CAYNNNNRTG 3 cut(s) 2778, 3021, 3354
SacI GAGCTC 3 cut(s) 280, 1490, 2270
Sau96I GGNCC 5 cut(s) 110, 882, 1864, 3422, 4184
ScrFI CCNGG 3 cut(s) 2260, 4472, 4556
SduI GDGCHC 5 cut(s) 280, 1426, 1490, 1835, 2270
SfcI CTRYAG 8 cut(s) 516, 750, 1620, 2278, 2757, 3396, 3578, 4017
SfoI GGCGCC 1 cut(s) 4649
Sfr274I CTCGAG 1 cut(s) 4385
SfuI TTCGAA 1 cut(s) 2856
SinI GGWCC 3 cut(s) 1864, 3422, 4184
SlaI CTCGAG 1 cut(s) 4385
SmiMI CAYNNNNRTG 3 cut(s) 2778, 3021, 3354
SmlI CTYRAG 7 cut(s) 85, 2524, 2544, 2992, 3071, 3292, 4385
SmoI CTYRAG 7 cut(s) 85, 2524, 2544, 2992, 3071, 3292, 4385
SpeI ACTAGT 2 cut(s) 422, 1943
SphI GCATGC 1 cut(s) 1177
SseBI AGGCCT 1 cut(s) 2284
SspDI GGCGCC 1 cut(s) 4647
SspI AATATT 1 cut(s) 344
SstI GAGCTC 3 cut(s) 280, 1490, 2270
StuI AGGCCT 1 cut(s) 2284
StyD4I CCNGG 3 cut(s) 2258, 4470, 4554
StyI CCWWGG 4 cut(s) 1394, 1557, 2930, 4328
TaiI ACGT 7 cut(s) 548, 1435, 2520, 2588, 3205, 3281, 3478
TaqI TCGA 8 cut(s) 30, 1972, 2487, 2856, 3147, 3598, 4200, 4386
TatI WGTACW 2 cut(s) 1304, 4058
TauI GCSGC 2 cut(s) 335, 2444
TscAI CASTG 7 cut(s) 421, 1057, 2235, 2688, 2766, 2793, 4638
TseFI GTSAC 4 cut(s) 392, 828, 2716, 3691
Tsp45I GTSAC 4 cut(s) 392, 828, 2716, 3691
TspGWI ACGGA 2 cut(s) 667, 3918
TspRI CASTG 7 cut(s) 421, 1057, 2235, 2688, 2766, 2793, 4638
Van91I CCANNNNNTGG 2 cut(s) 3644, 4100
Vha464I CTTAAG 1 cut(s) 2524
VpaK11BI GGWCC 3 cut(s) 1864, 3422, 4184
VspI ATTAAT 2 cut(s) 818, 1500
XagI CCTNNNNNAGG 2 cut(s) 3581, 4332
XbaI TCTAGA 1 cut(s) 4133
XceI RCATGY 3 cut(s) 393, 1177, 4295
XcmI CCANNNNNNNNNTGG 1 cut(s) 2515
XhoI CTCGAG 1 cut(s) 4385
XmiI GTMKAC 2 cut(s) 1540, 2756
XmnI GAANNNNTTC 2 cut(s) 3558, 4599
Zsp2I ATGCAT 1 cut(s) 3341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.