RING FYVE PHD zinc finger superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 501 |
| Acc36I | ACCTGC | 1 cut(s) | 156 |
| Acc65I | GGTACC | 1 cut(s) | 3841 |
| AccB1I | GGYRCC | 1 cut(s) | 3841 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3227, 3659 |
| AccI | GTMKAC | 3 cut(s) | 1121, 2923, 3097 |
| AccII | CGCG | 3 cut(s) | 741, 2992, 3885 |
| AciI | CCGC | 6 cut(s) | 50, 739, 1489, 1953, 2528, 4013 |
| AclI | AACGTT | 1 cut(s) | 2770 |
| AclWI | GGATC | 3 cut(s) | 600, 1021, 3030 |
| AcoI | YGGCCR | 2 cut(s) | 481, 2570 |
| AcuI | CTGAAG | 4 cut(s) | 1665, 3069, 3156, 3846 |
| AdeI | CACNNNGTG | 1 cut(s) | 4144 |
| AfaI | GTAC | 8 cut(s) | 931, 1180, 1630, 1981, 3087, 3700, 3785, 3843 |
| AflII | CTTAAG | 1 cut(s) | 2137 |
| AflIII | ACRYGT | 2 cut(s) | 439, 2843 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2116 |
| AhlI | ACTAGT | 2 cut(s) | 140, 1565 |
| AjiI | CACGTC | 1 cut(s) | 2124 |
| AjnI | CCWGG | 3 cut(s) | 1740, 1871, 4093 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3646, 3678 |
| Alw21I | GWGCWC | 5 cut(s) | 1457, 1883, 1996, 2100, 4122 |
| Alw26I | GTCTC | 7 cut(s) | 131, 943, 1556, 1784, 2834, 3885, 3905 |
| AlwI | GGATC | 3 cut(s) | 600, 1021, 3030 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1142 |
| Ama87I | CYCGRG | 2 cut(s) | 2857, 3902 |
| AoxI | GGCC | 8 cut(s) | 481, 736, 1170, 1869, 1895, 2570, 3004, 3824 |
| ApaI | GGGCCC | 1 cut(s) | 3008 |
| ApeKI | GCWGC | 9 cut(s) | 646, 771, 2054, 2242, 2254, 3506, 3581, 3949, 4010 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1248, 3574, 3854 |
| Asp718I | GGTACC | 1 cut(s) | 3841 |
| AspLEI | GCGC | 2 cut(s) | 2992, 4173 |
| AspS9I | GGNCC | 8 cut(s) | 514, 830, 1170, 1782, 2503, 3004, 3005, 3824 |
| AsuHPI | GGTGA | 9 cut(s) | 410, 913, 1008, 1571, 2160, 3085, 3263, 3430, 3622 |
| AsuII | TTCGAA | 1 cut(s) | 2065 |
| AsuNHI | GCTAGC | 2 cut(s) | 1349, 3907 |
| AvaI | CYCGRG | 2 cut(s) | 2857, 3902 |
| AvaII | GGWCC | 4 cut(s) | 514, 830, 1782, 2503 |
| BaeGI | GKGCMC | 1 cut(s) | 3008 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 213, 246 |
| BalI | TGGCCA | 2 cut(s) | 483, 2572 |
| BanI | GGYRCC | 1 cut(s) | 3841 |
| BanII | GRGCYC | 2 cut(s) | 1883, 3008 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 325, 357, 1815, 1847 |
| BauI | CACGAG | 1 cut(s) | 1554 |
| BbsI | GAAGAC | 3 cut(s) | 207, 2384, 3300 |
| Bbv12I | GWGCWC | 5 cut(s) | 1457, 1883, 1996, 2100, 4122 |
| BbvI | GCAGC | 9 cut(s) | 658, 783, 2066, 2254, 2266, 3518, 3593, 3936, 4022 |
| BceAI | ACGGC | 2 cut(s) | 3326, 3821 |
| BciT130I | CCWGG | 3 cut(s) | 1742, 1873, 4095 |
| BcoDI | GTCTC | 7 cut(s) | 131, 943, 1556, 1784, 2834, 3885, 3905 |
| BcuI | ACTAGT | 2 cut(s) | 140, 1565 |
| BfmI | CTRYAG | 5 cut(s) | 1891, 2325, 3164, 3579, 3682 |
| BfoI | RGCGCY | 1 cut(s) | 4174 |
| BfrI | CTTAAG | 1 cut(s) | 2137 |
| BfuAI | ACCTGC | 1 cut(s) | 156 |
| BglII | AGATCT | 4 cut(s) | 1328, 1420, 2635, 2960 |
| BmcAI | AGTACT | 1 cut(s) | 1630 |
| Bme1390I | CCNGG | 3 cut(s) | 1742, 1873, 4095 |
| Bme18I | GGWCC | 4 cut(s) | 514, 830, 1782, 2503 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2116 |
| BmeT110I | CYCGRG | 2 cut(s) | 2857, 3902 |
| BmgBI | CACGTC | 1 cut(s) | 2124 |
| BmgT120I | GGNCC | 8 cut(s) | 514, 830, 1170, 1782, 2503, 3004, 3005, 3824 |
| BmrFI | CCNGG | 3 cut(s) | 1742, 1873, 4095 |
| BmrI | ACTGGG | 1 cut(s) | 3237 |
| BmtI | GCTAGC | 2 cut(s) | 1353, 3911 |
| BmuI | ACTGGG | 1 cut(s) | 3237 |
| BpiI | GAAGAC | 3 cut(s) | 207, 2384, 3300 |
| BpmI | CTGGAG | 1 cut(s) | 408 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1354, 2928 |
| Bpu14I | TTCGAA | 1 cut(s) | 2065 |
| BpuEI | CTTGAG | 2 cut(s) | 1656, 2142 |
| BsaBI | GATNNNNATC | 2 cut(s) | 279, 3042 |
| BsaWI | WCCGGW | 1 cut(s) | 4114 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3343, 3373 |
| Bse1I | ACTGG | 4 cut(s) | 132, 3130, 3232, 3827 |
| Bse3DI | GCAATG | 1 cut(s) | 2367 |
| Bse8I | GATNNNNATC | 2 cut(s) | 279, 3042 |
| BseBI | CCWGG | 3 cut(s) | 1742, 1873, 4095 |
| BseGI | GGATG | 9 cut(s) | 676, 736, 1762, 1867, 2680, 2741, 2944, 3634, 4027 |
| BseJI | GATNNNNATC | 2 cut(s) | 279, 3042 |
| BseMI | GCAATG | 1 cut(s) | 2367 |
| BseMII | CTCAG | 6 cut(s) | 1130, 1368, 2327, 2552, 2748, 2895 |
| BseNI | ACTGG | 4 cut(s) | 132, 3130, 3232, 3827 |
| BseRI | GAGGAG | 4 cut(s) | 2027, 3428, 3731, 3758 |
| BseSI | GKGCMC | 1 cut(s) | 3008 |
| BseXI | GCAGC | 9 cut(s) | 658, 783, 2066, 2254, 2266, 3518, 3593, 3936, 4022 |
| BseYI | CCCAGC | 2 cut(s) | 2852, 3347 |
| BsgI | GTGCAG | 4 cut(s) | 790, 801, 1128, 2450 |
| Bsh1236I | CGCG | 3 cut(s) | 741, 2992, 3885 |
| BshFI | GGCC | 8 cut(s) | 483, 738, 1172, 1871, 1897, 2572, 3006, 3826 |
| BshNI | GGYRCC | 1 cut(s) | 3841 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1457, 1883, 1996, 2100, 4122 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2857, 3902 |
| BsiSI | CCGG | 1 cut(s) | 4115 |
| BslFI | GGGAC | 3 cut(s) | 500, 1795, 2206 |
| BsmAI | GTCTC | 7 cut(s) | 131, 943, 1556, 1784, 2834, 3885, 3905 |
| BsmFI | GGGAC | 3 cut(s) | 500, 1795, 2206 |
| BsmI | GAATGC | 3 cut(s) | 854, 3152, 3951 |
| BsnI | GGCC | 8 cut(s) | 483, 738, 1172, 1871, 1897, 2572, 3006, 3826 |
| BsoBI | CYCGRG | 2 cut(s) | 2857, 3902 |
| Bsp119I | TTCGAA | 1 cut(s) | 2065 |
| Bsp120I | GGGCCC | 1 cut(s) | 3004 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1457, 1883, 1996, 2100, 3008, 4122 |
| Bsp19I | CCATGG | 2 cut(s) | 833, 3599 |
| Bsp68I | TCGCGA | 1 cut(s) | 3885 |
| BspACI | CCGC | 6 cut(s) | 50, 739, 1489, 1953, 2528, 4013 |
| BspANI | GGCC | 8 cut(s) | 483, 738, 1172, 1871, 1897, 2572, 3006, 3826 |
| BspCNI | CTCAG | 6 cut(s) | 1129, 1367, 2326, 2553, 2749, 2896 |
| BspFNI | CGCG | 3 cut(s) | 741, 2992, 3885 |
| BspMAI | CTGCAG | 2 cut(s) | 3168, 3583 |
| BspMI | ACCTGC | 1 cut(s) | 156 |
| BspOI | GCTAGC | 2 cut(s) | 1353, 3911 |
| BspPI | GGATC | 3 cut(s) | 600, 1021, 3030 |
| BspT104I | TTCGAA | 1 cut(s) | 2065 |
| BspT107I | GGYRCC | 1 cut(s) | 3841 |
| BspTI | CTTAAG | 1 cut(s) | 2137 |
| BsrDI | GCAATG | 1 cut(s) | 2367 |
| BsrI | ACTGG | 4 cut(s) | 132, 3130, 3232, 3827 |
| BssNAI | GTATAC | 1 cut(s) | 2924 |
| BssSI | CACGAG | 1 cut(s) | 1554 |
| BssT1I | CCWWGG | 6 cut(s) | 833, 1173, 1494, 2188, 2985, 3599 |
| Bst1107I | GTATAC | 1 cut(s) | 2924 |
| Bst2BI | CACGAG | 1 cut(s) | 1554 |
| Bst2UI | CCWGG | 3 cut(s) | 1742, 1873, 4095 |
| Bst6I | CTCTTC | 3 cut(s) | 3045, 3716, 3865 |
| BstAFI | CTTAAG | 1 cut(s) | 2137 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 652, 4126 |
| BstBI | TTCGAA | 1 cut(s) | 2065 |
| BstC8I | GCNNGC | 9 cut(s) | 736, 753, 993, 1351, 1899, 2321, 3164, 3909, 4175 |
| BstDSI | CCRYGG | 3 cut(s) | 833, 3599, 3845 |
| BstF5I | GGATG | 9 cut(s) | 676, 736, 1762, 1867, 2680, 2741, 2944, 3634, 4027 |
| BstFNI | CGCG | 3 cut(s) | 741, 2992, 3885 |
| BstH2I | RGCGCY | 1 cut(s) | 4174 |
| BstHHI | GCGC | 2 cut(s) | 2992, 4173 |
| BstMAI | GTCTC | 7 cut(s) | 131, 943, 1556, 1784, 2834, 3885, 3905 |
| BstNI | CCWGG | 3 cut(s) | 1742, 1873, 4095 |
| BstNSI | RCATGY | 6 cut(s) | 111, 443, 646, 1283, 2847, 3812 |
| BstSCI | CCNGG | 3 cut(s) | 1740, 1871, 4093 |
| BstSFI | CTRYAG | 5 cut(s) | 1891, 2325, 3164, 3579, 3682 |
| BstSLI | GKGCMC | 1 cut(s) | 3008 |
| BstUI | CGCG | 3 cut(s) | 741, 2992, 3885 |
| BstV1I | GCAGC | 9 cut(s) | 658, 783, 2066, 2254, 2266, 3518, 3593, 3936, 4022 |
| BstV2I | GAAGAC | 3 cut(s) | 207, 2384, 3300 |
| BstX2I | RGATCY | 4 cut(s) | 1328, 1420, 2635, 2960 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1321 |
| BstYI | RGATCY | 4 cut(s) | 1328, 1420, 2635, 2960 |
| BstZ17I | GTATAC | 1 cut(s) | 2924 |
| BsuRI | GGCC | 8 cut(s) | 483, 738, 1172, 1871, 1897, 2572, 3006, 3826 |
| BtgI | CCRYGG | 3 cut(s) | 833, 3599, 3845 |
| BtgZI | GCGATG | 2 cut(s) | 789, 2478 |
| BtrI | CACGTC | 1 cut(s) | 2124 |
| BtsCI | GGATG | 9 cut(s) | 676, 736, 1762, 1867, 2680, 2741, 2944, 3634, 4027 |
| BtsI | GCAGTG | 2 cut(s) | 1607, 4154 |
| BtsIMutI | CAGTG | 7 cut(s) | 139, 682, 1607, 2334, 3297, 3705, 4154 |
| BtuMI | TCGCGA | 1 cut(s) | 3885 |
| BveI | ACCTGC | 1 cut(s) | 156 |
| Cac8I | GCNNGC | 9 cut(s) | 736, 753, 993, 1351, 1899, 2321, 3164, 3909, 4175 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1142 |
| CfoI | GCGC | 2 cut(s) | 2992, 4173 |
| Cfr13I | GGNCC | 8 cut(s) | 514, 830, 1170, 1782, 2503, 3004, 3005, 3824 |
| CseI | GACGC | 2 cut(s) | 2981, 4035 |
| CsiI | ACCWGGT | 1 cut(s) | 1740 |
| Csp6I | GTAC | 8 cut(s) | 930, 1179, 1629, 1980, 3086, 3699, 3784, 3842 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3690, 3725 |
| CviQI | GTAC | 8 cut(s) | 930, 1179, 1629, 1980, 3086, 3699, 3784, 3842 |
| DraI | TTTAAA | 3 cut(s) | 1924, 2238, 3457 |
| DraIII | CACNNNGTG | 1 cut(s) | 4144 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2116 |
| EaeI | YGGCCR | 2 cut(s) | 481, 2570 |
| Eam1104I | CTCTTC | 3 cut(s) | 3045, 3716, 3865 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2116 |
| EarI | CTCTTC | 3 cut(s) | 3045, 3716, 3865 |
| EciI | GGCGGA | 1 cut(s) | 1968 |
| Ecl136II | GAGCTC | 1 cut(s) | 1881 |
| Eco130I | CCWWGG | 6 cut(s) | 833, 1173, 1494, 2188, 2985, 3599 |
| Eco147I | AGGCCT | 1 cut(s) | 1897 |
| Eco24I | GRGCYC | 2 cut(s) | 1883, 3008 |
| Eco47I | GGWCC | 4 cut(s) | 514, 830, 1782, 2503 |
| Eco53kI | GAGCTC | 1 cut(s) | 1881 |
| Eco57I | CTGAAG | 4 cut(s) | 1665, 3069, 3156, 3846 |
| Eco88I | CYCGRG | 2 cut(s) | 2857, 3902 |
| EcoICRI | GAGCTC | 1 cut(s) | 1881 |
| EcoO109I | RGGNCCY | 3 cut(s) | 514, 2503, 3005 |
| EcoRII | CCWGG | 3 cut(s) | 1740, 1871, 4093 |
| EcoT14I | CCWWGG | 6 cut(s) | 833, 1173, 1494, 2188, 2985, 3599 |
| EcoT22I | ATGCAT | 1 cut(s) | 3152 |
| EcoT38I | GRGCYC | 2 cut(s) | 1883, 3008 |
| ErhI | CCWWGG | 6 cut(s) | 833, 1173, 1494, 2188, 2985, 3599 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 735, 767, 1218, 1250, 3062, 3094, 3713, 3745 |
| FaqI | GGGAC | 3 cut(s) | 500, 1795, 2206 |
| FauNDI | CATATG | 3 cut(s) | 2918, 2934, 3000 |
| FblI | GTMKAC | 3 cut(s) | 1121, 2923, 3097 |
| FokI | GGATG | 9 cut(s) | 683, 743, 1769, 1874, 2687, 2728, 2951, 3641, 4034 |
| FriOI | GRGCYC | 2 cut(s) | 1883, 3008 |
| GlaI | GCGC | 2 cut(s) | 2991, 4172 |
| GsaI | CCCAGC | 2 cut(s) | 2856, 3351 |
| GsuI | CTGGAG | 1 cut(s) | 408 |
| HaeII | RGCGCY | 1 cut(s) | 4174 |
| HaeIII | GGCC | 8 cut(s) | 483, 738, 1172, 1871, 1897, 2572, 3006, 3826 |
| HapII | CCGG | 1 cut(s) | 4115 |
| HgaI | GACGC | 2 cut(s) | 2981, 4035 |
| HhaI | GCGC | 2 cut(s) | 2992, 4173 |
| Hin6I | GCGC | 2 cut(s) | 2990, 4171 |
| HinP1I | GCGC | 2 cut(s) | 2990, 4171 |
| HincII | GTYRAC | 3 cut(s) | 1666, 2484, 3832 |
| HindII | GTYRAC | 3 cut(s) | 1666, 2484, 3832 |
| HindIII | AAGCTT | 1 cut(s) | 1075 |
| HpaII | CCGG | 1 cut(s) | 4115 |
| HphI | GGTGA | 9 cut(s) | 410, 913, 1008, 1571, 2160, 3085, 3263, 3430, 3622 |
| Hpy99I | CGWCG | 2 cut(s) | 2128, 4051 |
| HpyCH4IV | ACGT | 3 cut(s) | 1147, 2123, 2770 |
| HpySE526I | ACGT | 3 cut(s) | 1147, 2123, 2770 |
| HspAI | GCGC | 2 cut(s) | 2990, 4171 |
| KflI | GGGWCCC | 1 cut(s) | 514 |
| KpnI | GGTACC | 1 cut(s) | 3845 |
| LmnI | GCTCC | 7 cut(s) | 697, 979, 1452, 1955, 1999, 2884, 4117 |
| Lsp1109I | GCAGC | 9 cut(s) | 658, 783, 2066, 2254, 2266, 3518, 3593, 3936, 4022 |
| MabI | ACCWGGT | 1 cut(s) | 1740 |
| MaeII | ACGT | 3 cut(s) | 1147, 2123, 2770 |
| MaeIII | GTNAC | 9 cut(s) | 110, 143, 167, 293, 1541, 1830, 2166, 2645, 3274 |
| MflI | RGATCY | 4 cut(s) | 1328, 1420, 2635, 2960 |
| MhlI | GDGCHC | 6 cut(s) | 1457, 1883, 1996, 2100, 3008, 4122 |
| MlsI | TGGCCA | 2 cut(s) | 483, 2572 |
| MluNI | TGGCCA | 2 cut(s) | 483, 2572 |
| MlyI | GAGTC | 2 cut(s) | 2201, 2285 |
| MmeI | TCCRAC | 6 cut(s) | 351, 447, 2652, 2753, 3132, 3245 |
| Mox20I | TGGCCA | 2 cut(s) | 483, 2572 |
| Mph1103I | ATGCAT | 1 cut(s) | 3152 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1248, 3574, 3854 |
| MscI | TGGCCA | 2 cut(s) | 483, 2572 |
| MslI | CAYNNNNRTG | 4 cut(s) | 838, 2346, 2589, 2937 |
| Msp20I | TGGCCA | 2 cut(s) | 483, 2572 |
| MspA1I | CMGCKG | 1 cut(s) | 4013 |
| MspCI | CTTAAG | 1 cut(s) | 2137 |
| MspI | CCGG | 1 cut(s) | 4115 |
| MspR9I | CCNGG | 3 cut(s) | 1742, 1873, 4095 |
| Mva1269I | GAATGC | 3 cut(s) | 854, 3152, 3951 |
| MvaI | CCWGG | 3 cut(s) | 1742, 1873, 4095 |
| MvnI | CGCG | 3 cut(s) | 741, 2992, 3885 |
| NcoI | CCATGG | 2 cut(s) | 833, 3599 |
| NdeI | CATATG | 3 cut(s) | 2918, 2934, 3000 |
| NheI | GCTAGC | 2 cut(s) | 1349, 3907 |
| NmeAIII | GCCGAG | 1 cut(s) | 886 |
| NmuCI | GTSAC | 5 cut(s) | 110, 167, 1541, 2166, 3274 |
| NruI | TCGCGA | 1 cut(s) | 3885 |
| NsiI | ATGCAT | 1 cut(s) | 3152 |
| NspI | RCATGY | 6 cut(s) | 111, 443, 646, 1283, 2847, 3812 |
| NspV | TTCGAA | 1 cut(s) | 2065 |
| PaeR7I | CTCGAG | 2 cut(s) | 2857, 3902 |
| PceI | AGGCCT | 1 cut(s) | 1897 |
| PciI | ACATGT | 2 cut(s) | 439, 2843 |
| PctI | GAATGC | 3 cut(s) | 854, 3152, 3951 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1248, 3574, 3854 |
| PflFI | GACNNNGTC | 1 cut(s) | 2899 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3227, 3659 |
| PleI | GAGTC | 2 cut(s) | 2201, 2285 |
| PpsI | GAGTC | 2 cut(s) | 2201, 2285 |
| PpuMI | RGGWCCY | 2 cut(s) | 514, 2503 |
| PscI | ACATGT | 2 cut(s) | 439, 2843 |
| PsiI | TTATAA | 1 cut(s) | 501 |
| Psp124BI | GAGCTC | 1 cut(s) | 1883 |
| Psp1406I | AACGTT | 1 cut(s) | 2770 |
| Psp5II | RGGWCCY | 2 cut(s) | 514, 2503 |
| Psp6I | CCWGG | 3 cut(s) | 1740, 1871, 4093 |
| PspFI | CCCAGC | 2 cut(s) | 2852, 3347 |
| PspGI | CCWGG | 3 cut(s) | 1740, 1871, 4093 |
| PspOMI | GGGCCC | 1 cut(s) | 3004 |
| PspPI | GGNCC | 8 cut(s) | 514, 830, 1170, 1782, 2503, 3004, 3005, 3824 |
| PspPPI | RGGWCCY | 2 cut(s) | 514, 2503 |
| PstI | CTGCAG | 2 cut(s) | 3168, 3583 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1142 |
| PsuI | RGATCY | 4 cut(s) | 1328, 1420, 2635, 2960 |
| PsyI | GACNNNGTC | 1 cut(s) | 2899 |
| RruI | TCGCGA | 1 cut(s) | 3885 |
| RsaI | GTAC | 8 cut(s) | 931, 1180, 1630, 1981, 3087, 3700, 3785, 3843 |
| RsaNI | GTAC | 8 cut(s) | 930, 1179, 1629, 1980, 3086, 3699, 3784, 3842 |
| RseI | CAYNNNNRTG | 4 cut(s) | 838, 2346, 2589, 2937 |
| SacI | GAGCTC | 1 cut(s) | 1883 |
| Sau96I | GGNCC | 8 cut(s) | 514, 830, 1170, 1782, 2503, 3004, 3005, 3824 |
| SbfI | CCTGCAGG | 1 cut(s) | 3168 |
| ScaI | AGTACT | 1 cut(s) | 1630 |
| SchI | GAGTC | 2 cut(s) | 2201, 2285 |
| ScrFI | CCNGG | 3 cut(s) | 1742, 1873, 4095 |
| SdaI | CCTGCAGG | 1 cut(s) | 3168 |
| SduI | GDGCHC | 6 cut(s) | 1457, 1883, 1996, 2100, 3008, 4122 |
| SexAI | ACCWGGT | 1 cut(s) | 1740 |
| SfcI | CTRYAG | 5 cut(s) | 1891, 2325, 3164, 3579, 3682 |
| Sfr274I | CTCGAG | 2 cut(s) | 2857, 3902 |
| SfuI | TTCGAA | 1 cut(s) | 2065 |
| SinI | GGWCC | 4 cut(s) | 514, 830, 1782, 2503 |
| SlaI | CTCGAG | 2 cut(s) | 2857, 3902 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 838, 2346, 2589, 2937 |
| SmlI | CTYRAG | 5 cut(s) | 1671, 2137, 2157, 2857, 3902 |
| SmoI | CTYRAG | 5 cut(s) | 1671, 2137, 2157, 2857, 3902 |
| SpeI | ACTAGT | 2 cut(s) | 140, 1565 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3168 |
| SseBI | AGGCCT | 1 cut(s) | 1897 |
| SsiI | CCGC | 6 cut(s) | 50, 739, 1489, 1953, 2528, 4013 |
| SspI | AATATT | 3 cut(s) | 62, 2611, 3616 |
| SstI | GAGCTC | 1 cut(s) | 1883 |
| StuI | AGGCCT | 1 cut(s) | 1897 |
| StyD4I | CCNGG | 3 cut(s) | 1740, 1871, 4093 |
| StyI | CCWWGG | 6 cut(s) | 833, 1173, 1494, 2188, 2985, 3599 |
| TaiI | ACGT | 3 cut(s) | 1150, 2126, 2773 |
| TaqI | TCGA | 7 cut(s) | 1591, 2065, 2100, 2126, 2858, 3181, 3903 |
| TatI | WGTACW | 2 cut(s) | 929, 1628 |
| TauI | GCSGC | 2 cut(s) | 53, 741 |
| TscAI | CASTG | 7 cut(s) | 139, 682, 1614, 2334, 3304, 3712, 4161 |
| TseFI | GTSAC | 5 cut(s) | 110, 167, 1541, 2166, 3274 |
| TseI | GCWGC | 9 cut(s) | 646, 771, 2054, 2242, 2254, 3506, 3581, 3949, 4010 |
| Tsp45I | GTSAC | 5 cut(s) | 110, 167, 1541, 2166, 3274 |
| TspGWI | ACGGA | 1 cut(s) | 1958 |
| TspRI | CASTG | 7 cut(s) | 139, 682, 1614, 2334, 3304, 3712, 4161 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2899 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3227, 3659 |
| Vha464I | CTTAAG | 1 cut(s) | 2137 |
| VpaK11BI | GGWCC | 4 cut(s) | 514, 830, 1782, 2503 |
| XbaI | TCTAGA | 1 cut(s) | 3692 |
| XceI | RCATGY | 6 cut(s) | 111, 443, 646, 1283, 2847, 3812 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2128 |
| XhoI | CTCGAG | 2 cut(s) | 2857, 3902 |
| XmiI | GTMKAC | 3 cut(s) | 1121, 2923, 3097 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1248, 3574, 3854 |
| ZrmI | AGTACT | 1 cut(s) | 1630 |
| Zsp2I | ATGCAT | 1 cut(s) | 3152 |