Rh1AG474300
ERF Family

RING FYVE PHD zinc finger superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000769
Physical Location & Seq
Reverse (-)
68526887 .. 68534248
7362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG474300.1

Sequence Viewer

Length: 3297 bp
ATGGGGTCAAAGGCTGGTGAAGTTTCTGATGAAACCTGTCATGTTAGCGGGGCGAATCATTATTCTGTCAATGTGAGTGATAATTTGTCTTCTTTGAAGAGCAAGGCATGTGACAGTTTACAGCATACCACCAGTGAGACAAGTAACCTACTTAGCGTCAATTCGAGTTATGATTCTTTGTCTGAAAATGCTGAAAGCAGAGCACCCCTAAGGTTTTCTAATACTTCTGATGATTTAGAAGGTGTTGAGAAATTTCCAAATACATACAGTGATTCTAAAGTTGTTCAAGTTCATGAGGATAACATATCATGTGTAAGTAAAGCGAATGATACAAATACAGCATTCAGTAATCATAACAGGAATGTAGAGAGGAAGAGCCTTTCTTGTAGTTTAGCTTCAGTTGGTAGTGTAGGCCCTGAAGAATTTGGAAAGCCACCCAATTCAGTCTTCTTGGAGATTCCTCCTTTGAAAGATCCAAGTTCTGGCAGTGGCAGATTGAAGGAGAGAGTGCCAGAATTCTCTGGACTTATGGACTCATCATTAACAAAAGAAGCAATTACTAGCCAGAAATTTGCATCTTATAAAGGTTTGGAGGCCTCTACAAAAATTTGTCCGAAGTTTGAAGCAGAGACCAGTGATGATGGCCAAGACTCAAAACAGGAAGCTTTGAAATGTTCAGATCATGGTGAACAGGATATTAAGTCTAGTCAGGTGGTTGAAGCAGCTGCTATGCAGCCTTTGCAATCCGTCAATGGTGATGACAGTGATGAATCTGATATTGTGGAGCATGATGTAAAGGTATGTGATATTTGTGGGGACGCAGGTCGTGAAGAATCACTTGCCACTTGTAGCAGATGCAGCGACGGTGCAGAACACATCTATTGCATGCGAAAAATGCTTCGGAGAGTTCCTAAAGGTGACTGGTTGTGTGAGGAATGCAAGTTCACTGAGCAAACTGAAAACCAGAAGCAAGATTTAGATGGAAACAGAATGAAGAAAGCCATCTTGAGTACACAGCTCTCTAATAAGAGACGTGCAGACAATATAGAAGCGGCTCCTTCTTCTAAAAGGCAGACTCTTGAGACTCGGGTGGGATCACCAAAGCCGTCCAGCCCTAAGAGAACAGTTGCATTATCACGTGAGTCTTCATTCAAGAGTATGGATAAGGATAAGTTGAAGTCCGCTTATCAGACTTCTCTGCCCACTAATGATGTATCAGAAGCTGCACGCTCTCCAACAACCGGTCCTCGGCTCCAAACAGCCAAGGGTGCATTGTTAAAGTCAAATTCCTTCAACATGTATACCAAACCAAAGGTTAAACTTGTAGACAACATTGTTCCTCAGAAGCAGAAGGGGTCTAAAGAGCATGGTACTCTTGATATGAAGGAGAGGACAGCCAGAATGATGGGCAAATCTGTGTCATTCAGATCTCCTGACTCGGGGCGTTCCAATGTGTCCGAGTCAAAAGTTAAAATGCTTTCATCAAAATTTAACCCTCTTCAAGATCTGAAAGGAATGAAACAGCTAAAAGAGCGGAGCACAGTTGAAAGAAAAAATTTGTCTAAACTAGAACGTCCTCCAGTTAGTTTGATAACATCAAGTGCTATTGTTTCAACACCTAAGGTTGACCAAGCATCCCGTGGTGATACCAGTTTGCTTTCATCTGTGAGCAACCTTCGAGAGCATAAGGCTCTGCTATCTGATGGAAAATTAAATACGTCATCAAAAGCAATAAGTAGTCTAACTCGTAAAGGTGTTGAAACTCAAAGTTCTCCAGGTGGTTCTTCACCTATTAGTGGAATGTGTAGTGCTGCTTCTGAAGAAAAGTCGAACCAAGTTATCTCTAACAATGAACCTTTATCCAGCTATTCTCAGCCTGTTGAGAAAGTACCTGCTGATGATGAAGGGAAATTAGAAGATACACTTCGATCATGGGAAATGACAAATCAGACTGATAAAACCAGGGAGACCTCTGTTCGCAGTAGGCCGATTGTTGCAGCTAGTTCAAAAAGTCTGTTCTGTTCAATTTGTAAGGAGATTGGTCATACTGCTGAATCTTGCAAAAGCGGGATTTCACAGGCTAGTGTTACTGATGTTTCTCCTCCAAGAAGTTACAGGGAGGAGGTGCCAAGAGGTAGTAGGTTGAAAGATGCAATTCACGCTGCTTTCCTTAGAAAGCCTGAAATATACAAAAAGAAAACATTACCAGATCAACCTGATGAATTGTCCGCATCCAACATGGAATCAAGTTCTGAAGTAGCTTCTCCGGAGTTTGTATCAAATATGTTGAATAATAACACATATACTGAAGGATCACATGATGGAGAAGCAATTTCTGGGAGTTCTACTTCCGATTTCTACAAGAATACATTACAGCCCGCTAATTCTGTGATTCCTTCCAGGGTGGTAGACTCTGGTTCTGTTCTTCCTTCTTTTGGGAAGTCAACAATGAGAGATTTGCAGAGACAGGCTTCAGTGGGGATGTCTGTTCTTATGAAGACAACAGCCATTCCAGAATATGAATACATCTGGCAGGGGAGCTTTGAATTGCAAAGAGGTGGAAATATTCTGGATCTATGCGGTGGAATTCAAGCTCATTTATCGACTTGTGCATCACCAAAAGTACTTGAAGTGGTGAACAAATTTCCGCACAAAGTTCCTCTGAAAGAAGTACCTCGTTTAAGTGTATGGCCAGCACAATTTCATCAAAGTGGTGTTAGAGAGGACAATATAGCACTTTACTTCTTTGCCAAAGATCTTGAGAGTTATGAAAGGAACTACAAGATCCTTATAGATGCAATGATCAAGAATGATTTAGCCCTCAAAGGAAAGTTTGGTGGGGTTGAACTTCTGATACTCCCCTCAAATCAGCTTCCTGAGAAATCACAACGTTGGAATATGCTTTATTTCTTATGGGGTGTGTTCAGGGAGACAAGGGTGCATTACATAGATTCTACTAGAAAATTAGATGTTCCTGGCTTGAATGATGTCTCATTGGACAATGACACTCCCACTGTGATGGCTTTATCCAAGAACCTGCACGTTCCCGAGCATATAGGTGCAGCTGACAGGTTGTCTGGTGCAGCCTCTGCATCCAAGTCCCCAGAGCCTGTGGTTCTTACAGTTAGCAAGGGTCTTGAGAGCAAAGATACGTATTCGGAAGAGATGTGTTTTGGTTCAAAAGAGAACTTGGTGCTACAGGATAGTAGGGTTGACTCCGAATACACAACAAACAATGCAGGCTTGTCTGGAGGAGTTAAACGCACCACTCCTTCACTGCGTTGTTATCTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHD

Protein Analysis

1098

Amino Acids

120.1

Weight (kDa)

7.02

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPOC_AIPP2 PF23121 844 - 975 3.7e-50 AIPP2, SPOC-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000769)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02890 AT3G02890 AT3G02890 AT3G02890 AT5G16680 AT5G16680
fragaria_vesca FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220
malus_domestica MD01G1238900.v1.1 MD07G1310800.v1.1
prunus_persica Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1
pyrus_communis pycom01g24640 pycom07g28310
rosa_chinensis RchiOBHm_Chr1g0384581
rosa_laevigata RLG00000026030
rosa_multiflora Rmu_sc0006005.1_g000016
rosa_roxburghii Rroxscaffold_4G00276570
rosa_rugosa Rorug01G0449400 Rorug01G0449500
rosa_samantha Rh1AG474300 Rh1BG432300 Rh1CG445500 Rh1DG464900
rosa_wichuraiana Rw1G039830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 582
Acc36I ACCTGC 3 cut(s) 812, 1900, 3045
AccB1I GGYRCC 1 cut(s) 2125
AccB7I CCANNNNNTGG 1 cut(s) 482
AccBSI CCGCTC 1 cut(s) 1534
AccI GTMKAC 3 cut(s) 1301, 1326, 2409
AccIII TCCGGA 1 cut(s) 2266
AciI CCGC 9 cut(s) 48, 1052, 1182, 1534, 2067, 2229, 2379, 2580, 2648
AclI AACGTT 1 cut(s) 2890
AclWI GGATC 5 cut(s) 467, 1102, 2320, 2580, 2779
AcoI YGGCCR 2 cut(s) 643, 2690
AcuI CTGAAG 6 cut(s) 381, 438, 1839, 2274, 2328, 2457
AcvI CACGTG 1 cut(s) 1139
AfaI GTAC 5 cut(s) 1012, 1372, 1890, 2625, 2673
AfiI CCNNNNNNNGG 6 cut(s) 482, 1241, 1248, 1439, 1796, 2435
AflIII ACRYGT 1 cut(s) 1296
AgeI ACCGGT 1 cut(s) 1241
AhdI GACNNNNNGTC 1 cut(s) 3073
AjiI CACGTC 1 cut(s) 1034
AjnI CCWGG 4 cut(s) 1774, 1961, 2399, 2974
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AloI GAACNNNNNNTCC 2 cut(s) 926, 958
Alw21I GWGCWC 2 cut(s) 205, 1541
Alw26I GTCTC 8 cut(s) 131, 623, 1024, 1076, 1961, 2458, 2924, 2995
AlwI GGATC 5 cut(s) 467, 1102, 2320, 2580, 2779
AlwNI CAGNNNCTG 3 cut(s) 1223, 3089, 3110
Ama87I CYCGRG 3 cut(s) 1086, 1438, 3047
Aor13HI TCCGGA 1 cut(s) 2266
AoxI GGCC 5 cut(s) 412, 594, 643, 1985, 2690
AsiGI ACCGGT 1 cut(s) 1241
AspS9I GGNCC 2 cut(s) 413, 1244
AsuHPI GGTGA 9 cut(s) 29, 698, 767, 929, 1089, 1655, 1779, 2607, 2647
AvaI CYCGRG 3 cut(s) 1086, 1438, 3047
AvaII GGWCC 1 cut(s) 1244
AxyI CCTNAGG 2 cut(s) 209, 1620
BalI TGGCCA 2 cut(s) 645, 2692
BanI GGYRCC 1 cut(s) 2125
BarI GAAGNNNNNNTAC 4 cut(s) 379, 411, 1798, 1830
BbrPI CACGTG 1 cut(s) 1139
BbsI GAAGAC 4 cut(s) 81, 439, 1137, 2504
Bbv12I GWGCWC 2 cut(s) 205, 1541
BccI CCATC 7 cut(s) 635, 974, 1010, 1399, 1697, 2315, 3013
BceAI ACGGC 1 cut(s) 1090
BciT130I CCWGG 4 cut(s) 1776, 1963, 2401, 2976
BclI TGATCA 1 cut(s) 2802
BcoDI GTCTC 8 cut(s) 131, 623, 1024, 1076, 1961, 2458, 2924, 2995
BfaI CTAG 6 cut(s) 561, 705, 1568, 2001, 2082, 2958
BfmI CTRYAG 1 cut(s) 3197
BfuAI ACCTGC 3 cut(s) 812, 1900, 3045
BglII AGATCT 3 cut(s) 1427, 1504, 2755
BmcAI AGTACT 1 cut(s) 2625
Bme1390I CCNGG 4 cut(s) 1776, 1963, 2401, 2976
Bme18I GGWCC 1 cut(s) 1244
BmeRI GACNNNNNGTC 1 cut(s) 3073
BmeT110I CYCGRG 3 cut(s) 1086, 1438, 3047
BmgBI CACGTC 1 cut(s) 1034
BmgT120I GGNCC 2 cut(s) 413, 1244
BmiI GGNNCC 3 cut(s) 1056, 1253, 2127
BmrFI CCNGG 4 cut(s) 1776, 1963, 2401, 2976
BmsI GCATC 8 cut(s) 584, 845, 1643, 2140, 2240, 2621, 2785, 3101
BoxI GACNNNNGTC 1 cut(s) 822
BpiI GAAGAC 4 cut(s) 81, 439, 1137, 2504
BpmI CTGGAG 3 cut(s) 1563, 1758, 3270
BpuEI CTTGAG 4 cut(s) 1027, 1100, 2780, 3158
BsaAI YACGTR 2 cut(s) 1139, 3153
BsaI GGTCTC 2 cut(s) 623, 1961
BsaJI CCNNGG 5 cut(s) 1247, 1263, 1639, 1962, 2400
BsaWI WCCGGW 2 cut(s) 1241, 2266
Bsc4I CCNNNNNNNGG 6 cut(s) 482, 1241, 1248, 1439, 1796, 2435
Bse118I RCCGGY 1 cut(s) 1241
Bse1I ACTGG 5 cut(s) 132, 633, 926, 1580, 1650
Bse21I CCTNAGG 2 cut(s) 209, 1620
Bse3DI GCAATG 1 cut(s) 2805
BseAI TCCGGA 1 cut(s) 2266
BseBI CCWGG 4 cut(s) 1776, 1963, 2401, 2976
BseDI CCNNGG 5 cut(s) 1247, 1263, 1639, 1962, 2400
BseGI GGATG 4 cut(s) 1634, 2231, 2487, 3092
BseLI CCNNNNNNNGG 6 cut(s) 482, 1241, 1248, 1439, 1796, 2435
BseMI GCAATG 1 cut(s) 2805
BseMII CTCAG 4 cut(s) 939, 1355, 1886, 2868
BseNI ACTGG 5 cut(s) 132, 633, 926, 1580, 1650
BseRI GAGGAG 3 cut(s) 2091, 2135, 3267
BsgI GTGCAG 6 cut(s) 888, 1056, 1209, 3023, 3081, 3102
BshFI GGCC 5 cut(s) 414, 596, 645, 1987, 2692
BshNI GGYRCC 1 cut(s) 2125
BshTI ACCGGT 1 cut(s) 1241
BsiHKAI GWGCWC 2 cut(s) 205, 1541
BsiHKCI CYCGRG 3 cut(s) 1086, 1438, 3047
BsiSI CCGG 2 cut(s) 1242, 2267
BslFI GGGAC 2 cut(s) 830, 3085
BslI CCNNNNNNNGG 6 cut(s) 482, 1241, 1248, 1439, 1796, 2435
BsmAI GTCTC 8 cut(s) 131, 623, 1024, 1076, 1961, 2458, 2924, 2995
BsmBI CGTCTC 1 cut(s) 1024
BsmFI GGGAC 2 cut(s) 830, 3085
BsmI GAATGC 2 cut(s) 341, 941
BsnI GGCC 5 cut(s) 414, 596, 645, 1987, 2692
Bso31I GGTCTC 2 cut(s) 623, 1961
BsoBI CYCGRG 3 cut(s) 1086, 1438, 3047
Bsp1286I GDGCHC 2 cut(s) 205, 1541
Bsp13I TCCGGA 1 cut(s) 2266
BspACI CCGC 9 cut(s) 48, 1052, 1182, 1534, 2067, 2229, 2379, 2580, 2648
BspANI GGCC 5 cut(s) 414, 596, 645, 1987, 2692
BspCNI CTCAG 4 cut(s) 940, 1354, 1885, 2869
BspEI TCCGGA 1 cut(s) 2266
BspHI TCATGA 1 cut(s) 292
BspLI GGNNCC 3 cut(s) 1056, 1253, 2127
BspMI ACCTGC 3 cut(s) 812, 1900, 3045
BspPI GGATC 5 cut(s) 467, 1102, 2320, 2580, 2779
BspQI GCTCTTC 2 cut(s) 92, 368
BspT107I GGYRCC 1 cut(s) 2125
BspTNI GGTCTC 2 cut(s) 623, 1961
BsrBI CCGCTC 1 cut(s) 1534
BsrDI GCAATG 1 cut(s) 2805
BsrFI RCCGGY 1 cut(s) 1241
BsrI ACTGG 5 cut(s) 132, 633, 926, 1580, 1650
BssAI RCCGGY 1 cut(s) 1241
BssECI CCNNGG 5 cut(s) 1247, 1263, 1639, 1962, 2400
BssNAI GTATAC 1 cut(s) 1302
BssT1I CCWWGG 1 cut(s) 1263
Bst1107I GTATAC 1 cut(s) 1302
Bst2UI CCWGG 4 cut(s) 1776, 1963, 2401, 2976
Bst4CI ACNGT 8 cut(s) 116, 269, 764, 866, 1126, 1543, 3016, 3124
Bst6I CTCTTC 4 cut(s) 92, 368, 1503, 3156
BstAPI GCANNNNNTGC 2 cut(s) 739, 3089
BstBAI YACGTR 2 cut(s) 1139, 3153
BstC8I GCNNGC 5 cut(s) 887, 1228, 2379, 2694, 3241
BstDEI CTNAG 9 cut(s) 152, 209, 948, 1116, 1341, 1620, 1872, 2171, 2877
BstDSI CCRYGG 1 cut(s) 1639
BstF5I GGATG 4 cut(s) 1634, 2231, 2487, 3092
BstMAI GTCTC 8 cut(s) 131, 623, 1024, 1076, 1961, 2458, 2924, 2995
BstMWI GCNNNNNNNGC 7 cut(s) 739, 858, 895, 1268, 1531, 2159, 3089
BstNI CCWGG 4 cut(s) 1776, 1963, 2401, 2976
BstNSI RCATGY 3 cut(s) 111, 889, 1300
BstPAI GACNNNNGTC 1 cut(s) 822
BstSCI CCNGG 4 cut(s) 1774, 1961, 2399, 2974
BstSFI CTRYAG 1 cut(s) 3197
BstSNI TACGTA 1 cut(s) 3153
BstV2I GAAGAC 4 cut(s) 81, 439, 1137, 2504
BstX2I RGATCY 6 cut(s) 472, 1427, 1504, 2572, 2755, 2784
BstXI CCANNNNNNTGG 2 cut(s) 1405, 3019
BstYI RGATCY 6 cut(s) 472, 1427, 1504, 2572, 2755, 2784
BstZ17I GTATAC 1 cut(s) 1302
Bsu36I CCTNAGG 2 cut(s) 209, 1620
BsuRI GGCC 5 cut(s) 414, 596, 645, 1987, 2692
BtgI CCRYGG 1 cut(s) 1639
BtrI CACGTC 1 cut(s) 1034
BtsCI GGATG 4 cut(s) 1634, 2231, 2487, 3092
BtsI GCAGTG 2 cut(s) 493, 3275
BtsIMutI CAGTG 9 cut(s) 139, 274, 493, 640, 769, 945, 2481, 3012, 3275
BveI ACCTGC 3 cut(s) 812, 1900, 3045
Cac8I GCNNGC 5 cut(s) 887, 1228, 2379, 2694, 3241
CaiI CAGNNNCTG 3 cut(s) 1223, 3089, 3110
CciI TCATGA 1 cut(s) 292
Cfr10I RCCGGY 1 cut(s) 1241
Cfr13I GGNCC 2 cut(s) 413, 1244
CseI GACGC 2 cut(s) 145, 827
Csp6I GTAC 5 cut(s) 1011, 1371, 1889, 2624, 2672
CspAI ACCGGT 1 cut(s) 1241
CviQI GTAC 5 cut(s) 1011, 1371, 1889, 2624, 2672
DdeI CTNAG 9 cut(s) 152, 209, 948, 1116, 1341, 1620, 1872, 2171, 2877
DriI GACNNNNNGTC 1 cut(s) 3073
EaeI YGGCCR 2 cut(s) 643, 2690
Eam1104I CTCTTC 4 cut(s) 92, 368, 1503, 3156
Eam1105I GACNNNNNGTC 1 cut(s) 3073
EarI CTCTTC 4 cut(s) 92, 368, 1503, 3156
Eco105I TACGTA 1 cut(s) 3153
Eco130I CCWWGG 1 cut(s) 1263
Eco147I AGGCCT 1 cut(s) 596
Eco31I GGTCTC 2 cut(s) 623, 1961
Eco47I GGWCC 1 cut(s) 1244
Eco57I CTGAAG 6 cut(s) 381, 438, 1839, 2274, 2328, 2457
Eco72I CACGTG 1 cut(s) 1139
Eco81I CCTNAGG 2 cut(s) 209, 1620
Eco88I CYCGRG 3 cut(s) 1086, 1438, 3047
EcoO109I RGGNCCY 1 cut(s) 413
EcoRI GAATTC 2 cut(s) 515, 2586
EcoRII CCWGG 4 cut(s) 1774, 1961, 2399, 2974
EcoT14I CCWWGG 1 cut(s) 1263
ErhI CCWWGG 1 cut(s) 1263
Esp3I CGTCTC 1 cut(s) 1024
FalI AAGNNNNNCTT 4 cut(s) 822, 854, 1908, 1940
FaqI GGGAC 2 cut(s) 830, 3085
FauI CCCGC 3 cut(s) 41, 2060, 2386
FbaI TGATCA 1 cut(s) 2802
FblI GTMKAC 3 cut(s) 1301, 1326, 2409
FokI GGATG 4 cut(s) 1621, 2218, 2494, 3079
FspBI CTAG 6 cut(s) 561, 705, 1568, 2001, 2082, 2958
GsuI CTGGAG 3 cut(s) 1563, 1758, 3270
HaeIII GGCC 5 cut(s) 414, 596, 645, 1987, 2692
HapII CCGG 2 cut(s) 1242, 2267
HgaI GACGC 2 cut(s) 145, 827
HincII GTYRAC 3 cut(s) 1627, 2445, 3214
HindII GTYRAC 3 cut(s) 1627, 2445, 3214
HindIII AAGCTT 1 cut(s) 663
HpaII CCGG 2 cut(s) 1242, 2267
HphI GGTGA 9 cut(s) 29, 698, 767, 929, 1089, 1655, 1779, 2607, 2647
Hpy99I CGWCG 1 cut(s) 866
HpyCH4III ACNGT 8 cut(s) 116, 269, 764, 866, 1126, 1543, 3016, 3124
HpyCH4IV ACGT 7 cut(s) 1033, 1138, 1573, 1718, 2890, 3042, 3152
HpyF10VI GCNNNNNNNGC 7 cut(s) 739, 858, 895, 1268, 1531, 2159, 3089
HpyF3I CTNAG 9 cut(s) 152, 209, 948, 1116, 1341, 1620, 1872, 2171, 2877
HpySE526I ACGT 7 cut(s) 1033, 1138, 1573, 1718, 2890, 3042, 3152
Kpn2I TCCGGA 1 cut(s) 2266
Ksp22I TGATCA 1 cut(s) 2802
LguI GCTCTTC 2 cut(s) 92, 368
LmnI GCTCC 5 cut(s) 784, 1060, 1257, 1536, 2538
LweI GCATC 8 cut(s) 584, 845, 1643, 2140, 2240, 2621, 2785, 3101
MaeI CTAG 6 cut(s) 561, 705, 1568, 2001, 2082, 2958
MaeII ACGT 7 cut(s) 1033, 1138, 1573, 1718, 2890, 3042, 3152
MaeIII GTNAC 5 cut(s) 110, 143, 917, 2086, 2111
MbiI CCGCTC 1 cut(s) 1534
MflI RGATCY 6 cut(s) 472, 1427, 1504, 2572, 2755, 2784
MhlI GDGCHC 2 cut(s) 205, 1541
MlsI TGGCCA 2 cut(s) 645, 2692
MluNI TGGCCA 2 cut(s) 645, 2692
MlyI GAGTC 9 cut(s) 527, 644, 1069, 1078, 1151, 1430, 1469, 2405, 3209
MmeI TCCRAC 3 cut(s) 1259, 2259, 2873
Mox20I TGGCCA 2 cut(s) 645, 2692
MroI TCCGGA 1 cut(s) 2266
MscI TGGCCA 2 cut(s) 645, 2692
MslI CAYNNNNRTG 3 cut(s) 2709, 3017, 3057
Msp20I TGGCCA 2 cut(s) 645, 2692
MspA1I CMGCKG 2 cut(s) 725, 3065
MspI CCGG 2 cut(s) 1242, 2267
MspR9I CCNGG 4 cut(s) 1776, 1963, 2401, 2976
Mva1269I GAATGC 2 cut(s) 341, 941
MvaI CCWGG 4 cut(s) 1776, 1963, 2401, 2976
MwoI GCNNNNNNNGC 7 cut(s) 739, 858, 895, 1268, 1531, 2159, 3089
NlaIV GGNNCC 3 cut(s) 1056, 1253, 2127
NmeAIII GCCGAG 1 cut(s) 1228
NmuCI GTSAC 2 cut(s) 110, 917
NspI RCATGY 3 cut(s) 111, 889, 1300
PaeI GCATGC 1 cut(s) 889
PagI TCATGA 1 cut(s) 292
PceI AGGCCT 1 cut(s) 596
PciI ACATGT 1 cut(s) 1296
PciSI GCTCTTC 2 cut(s) 92, 368
PctI GAATGC 2 cut(s) 341, 941
PflMI CCANNNNNTGG 1 cut(s) 482
PinAI ACCGGT 1 cut(s) 1241
PleI GAGTC 9 cut(s) 527, 644, 1069, 1078, 1150, 1430, 1468, 2405, 3209
PmaCI CACGTG 1 cut(s) 1139
PmlI CACGTG 1 cut(s) 1139
PpsI GAGTC 9 cut(s) 527, 644, 1069, 1078, 1150, 1430, 1468, 2405, 3209
Ppu21I YACGTR 2 cut(s) 1139, 3153
PscI ACATGT 1 cut(s) 1296
PshAI GACNNNNGTC 1 cut(s) 822
PsiI TTATAA 1 cut(s) 582
Psp1406I AACGTT 1 cut(s) 2890
Psp6I CCWGG 4 cut(s) 1774, 1961, 2399, 2974
PspCI CACGTG 1 cut(s) 1139
PspGI CCWGG 4 cut(s) 1774, 1961, 2399, 2974
PspN4I GGNNCC 3 cut(s) 1056, 1253, 2127
PspPI GGNCC 2 cut(s) 413, 1244
PsrI GAACNNNNNNTAC 2 cut(s) 2838, 2870
PstNI CAGNNNCTG 3 cut(s) 1223, 3089, 3110
PsuI RGATCY 6 cut(s) 472, 1427, 1504, 2572, 2755, 2784
PvuII CAGCTG 2 cut(s) 725, 3065
RsaI GTAC 5 cut(s) 1012, 1372, 1890, 2625, 2673
RsaNI GTAC 5 cut(s) 1011, 1371, 1889, 2624, 2672
RseI CAYNNNNRTG 3 cut(s) 2709, 3017, 3057
SapI GCTCTTC 2 cut(s) 92, 368
Sau96I GGNCC 2 cut(s) 413, 1244
ScaI AGTACT 1 cut(s) 2625
SchI GAGTC 9 cut(s) 527, 644, 1069, 1078, 1151, 1430, 1469, 2405, 3209
ScrFI CCNGG 4 cut(s) 1776, 1963, 2401, 2976
SduI GDGCHC 2 cut(s) 205, 1541
SfaNI GCATC 8 cut(s) 584, 845, 1643, 2140, 2240, 2621, 2785, 3101
SfcI CTRYAG 1 cut(s) 3197
SinI GGWCC 1 cut(s) 1244
SmiMI CAYNNNNRTG 3 cut(s) 2709, 3017, 3057
SmlI CTYRAG 4 cut(s) 1006, 1079, 2759, 3137
SmoI CTYRAG 4 cut(s) 1006, 1079, 2759, 3137
SnaBI TACGTA 1 cut(s) 3153
SphI GCATGC 1 cut(s) 889
SseBI AGGCCT 1 cut(s) 596
SsiI CCGC 9 cut(s) 48, 1052, 1182, 1534, 2067, 2229, 2379, 2580, 2648
SspI AATATT 1 cut(s) 2566
SspMI CTAG 6 cut(s) 561, 705, 1568, 2001, 2082, 2958
StuI AGGCCT 1 cut(s) 596
StyD4I CCNGG 4 cut(s) 1774, 1961, 2399, 2974
StyI CCWWGG 1 cut(s) 1263
TaaI ACNGT 8 cut(s) 116, 269, 764, 866, 1126, 1543, 3016, 3124
TaiI ACGT 7 cut(s) 1036, 1141, 1576, 1721, 2893, 3045, 3155
TaqI TCGA 5 cut(s) 164, 1678, 1829, 1927, 2603
TatI WGTACW 2 cut(s) 1010, 2623
TauI GCSGC 1 cut(s) 1055
TscAI CASTG 9 cut(s) 139, 274, 493, 640, 769, 952, 2481, 3019, 3282
TseFI GTSAC 2 cut(s) 110, 917
Tsp45I GTSAC 2 cut(s) 110, 917
TspGWI ACGGA 1 cut(s) 736
TspRI CASTG 9 cut(s) 139, 274, 493, 640, 769, 952, 2481, 3019, 3282
Van91I CCANNNNNTGG 1 cut(s) 482
VpaK11BI GGWCC 1 cut(s) 1244
XceI RCATGY 3 cut(s) 111, 889, 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 1637
XmiI GTMKAC 3 cut(s) 1301, 1326, 2409
XspI CTAG 6 cut(s) 561, 705, 1568, 2001, 2082, 2958
ZrmI AGTACT 1 cut(s) 2625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.