pycom01g24640
ERF Family

RING FYVE PHD zinc finger superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000769
Physical Location & Seq
Reverse (-)
21484784 .. 21491453
6670 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g24640.7

Sequence Viewer

Length: 3846 bp
ATGGAAGAATTTGCACATAAGTCAGTCTTGTCAGAGATGGTAAAACCTGCAGATTCTGGTGATAGCACAAAAAAGGGAAAACTGCCAGAATTTTTTGGACATGCTGATTCATCATTTAAGAATGAGTCAGATATTATTGCTGGCCAGAAATTCGTTTCTTATAAAAGTTTAGGGGTCCCTACAAAATTGTGTCCAAAGATAGAAGTAGAGAGTAACGGACAAGACCCAAAAGATGAAGCGTCAAAATGTTTGGATCATGGTGACAAAGATGTTATGTCGAATGAGTTGGCCGAAGTAGCTGACATGCAGCCCTTGCAATCTGCATCTGGGGATGACAGTGATGAATCAGAGCATGATGTAAAAGTATGTGATATTTGTGGGGATGCAGGTCGAGAAGATATGCTTGCCATGTGTAGTAGGTGCAGTGATGGTGCAGAACACATCTATTGTATGCGAAAAATGCTTCGGAGAGTTCCTAAAGGTCCATGGCTGTGTGAGGAATGCAAGTTTACCGAGGAAACTGACAACCAGAAGCAAGGTTCAGATATGGAGGTGAAAAGAAAGGAGAAAGCGATTATGAGTACACAATTCTCTAATAAGAGACTTGCAGAAAACATAGAAGTGGCTCCTTCTGTGAAAAGGCAGGGTCTTGAAATGCGGGTGGGATCACCAAAGCCATCTAGCCCTAAGAGAATGGGTGCTCTATCACGCGAGTCTTCATTCAAAAGCTTAGATAAGGATAGGTTGAGGCCAGCTTATCAGACTTCTCAGGGTACTAATAATATATCAGAAACTGCACGTTCTCCTTCAAATGGCATAGGGGCCAAGGGTACATTTTCAAAGTCAAATTCGTTCAGCACGTTAAATTCTAAACCAAAAGTTAAACATGTAGATGAAGTTGTTCCTCACAAGCAAAAGGGTTTTAAAGAACATGCCTCCCTTGATATGAAGGAGAGGGTGGTGCCCAGAATTATGGGCAAGTCTGTGTCTTTCAAGTCTGCTAGCTCAGGGCGTTCGAATGTTTCTGAATCAAAAGTTAAAATGCTCTCATCAAAGTTTAGCCATGTTGCAGATCTTAAAGGATTGAAACAGGCAAAAGAGCGGAGTGCCGTTGAAAGAAAAAATTTGTCCAAACTAGACCGTCCCATGGCTAATTTTACGACAGCTAATTCTGTTGTCTCAACTCCTAAGAGTGACCTAGCATCTCGTGGTGAAACTAGTTTGCTTTCATCTGTGAGCAATCGTGAGCCAAAGGTTGCACTACCTGATGGAAAATCAAGTTCATCAAAATCTAGTGTAACTCGTGAAGGTTTTGACACTCAAATTACTTCAGGTGGAGGTTCATCTATGAATGGAATGTCTAGTTCTGCTTCTGAACAAAAGTTAAACCATGTTAGCTTTAAGGATGAATCCTTATCCAGCTCCGTGACTGTTGAGAAATTACACTGTAATGTAGATGGAACATCAGAAGATGTGTTACCACAATCAGGGGAAATGATAGATCAGGATGATAAAGCCAGGGAGAGCTCTGTTCGCTGTACGCCTGCTGTTGTAGCTATTCCAAAATGTAAAGAGATAGGAATTAACGCGGAATTTGGTAGACCTGTAATTTCACAGGCTTCTGGTACTGATGCTTCTGCTCCGAGAGGTTCTAGGGAGGAGATCCAGAGAGGTAACCGGTTGAAAGATGCTATTCATGCAGCTTCACTTAGAAAGTCTGAAATATACAGAAAGAAAAGAGTATTCGATCAGTCTGATGAGTCTTCAACACCGAACATGGACTCGAGTTATGAAGTAGCTGCTCAAGAGCAATCACCTGACGGACGTGCAATCCTTGGGACTTCTACTTCTGACTCTTCCAAGAATACAACTGTCAATAATTTAAAGCAGCTTACAGTGCAGCCCATTGATTCTGGGTTCCCTTCCAAAGTGGCATACTCTGTATCTGTTGTTCCTGGCAAGCCTACAGTGAAAGATTTGCATAATCATGCTTCAGGGGCGATGTCCGTTCTTGTGAAGACAACAGCCATTCCAGAATATGAATACATCTGGCAGGGAAGTTTTGAAGTGCAGAGAGGTGGAAATTTTATGGATTTATGTGGTGGAATTCAAGCTCACTTGTCCACTTGTGCATCACCAAAGGTCCCTGAAGTGGTAAACAAATTTCCACACAAAGTTTCTCTGAATGAAGTTCCTCGCCTGAGTGTATGGCCATCACAGTTCCGTCAAAGTGGCGCTAAAGAAGATAATATTGCACTTTATTTCTTCGCTAAAGATCTTGATAGTTATGAAAGACACTACAACAGCCTGTTGGATGCTATGGTCAAGAATGATCTAGCCCTCAAAGGGAATTTTGATGGTGTTGAACTTCTGATATTCCCATCCAATCAGCTTCCTGAGAAATCACAACGTTGGAATATGCTATTTTTCCTTTGGGGTGTGTTCAGGACAATGAGGGTGCATTGTTTAGATTTTACCGAGACATGTGTTCCTAGCTTGAGCAACTCATTTCATAAAGCTCCTACTGATGGCATGACATTGTCCGAGAACATATGTATACCTAAGCATATAGATGAATCTTCTCCTTCTGACAGATCTTTTGATGTTCCCTCTGCTTCCAATGCCTCTCTGCATATGGGCCCCACAGTTACCAAGGATTGTGAGAACAAAGATACTTATCCTGAAGAAGTGCGTTTAGGTTCAAAAGTGAACTTGGCAGTACAGGATTGTAGGGTTGATTCCAACACAACAAACAATGCTGGCTTGTCTGAAGGAGTTGAATACATCACTCCTTGCCTGCAGGAAAGTTGTCTTCGAGAAAGCAGAGTTGGTAAAGAAATTAAGTCTTCTATTCCAACAACTGGGTCAAATAGCTCCAACAAGGGTGAGAAGAGGCAAGTGCATTGGGTCACTTCTGTTGATAGGGAAGATACTGATTCTCTGGAGATTCGTCTTGTTTCCAGTCGAGAGGTAGCCGTTTCTAGGAGTGTTGGGGATGACAGATTTCCAGATAGAAAGAAAAGGGTTGGTATCGCAGGAGGGGTTGAGGAGGTGATTCTGGACAGAGTGAGGATGGATAAAGCTGATTTTAAACAAGAGAGGGAATTGAGGAGAGATTATGGATATAAGGAATCAGAAGCAGCCTTGGTGAGAGACTTGACAGCCAGAGTCAACTCTTGTCAGCCTAGTGATAGAAAACACCCAGACGTACCTATTTCAGAGAGAACAACTTCTGCAGCCACAACTCAAGAAATGCCATGGAATGAGGTGAATATCACACAGATGGATGTCGAGATTGATAGGAAGAAGCCAAAAATCGGTTCAAGTGGATTTGATGGCTGTAGCACTTCTAGAGGTACAGAAGCTGTGGTTGAGGACAAGAGATGCTTTGAAGCATGTGAGGAGAAAGTTATTCCAGAGGACTTGGGAAATACTGAAAGGTACTTCTTTCCTTTGGATTCACGTCATGTACAGCATTTTGGGCCGGTTGGCAACCCGGTGCCATGGAAAGATTTCTCATCAGGGTATGTGGATAAGACTCGCGAAGGGTTCCCAAGCCTCGAGCTAGCTCTAGGGGGAGAAACAAAACCACAAAATAAGGGAATACTGCCCTTCTTTGTTGGGTTAGCAGACGAGAAAGTTAACAACCAAGATAAGCCCTTAGAAGCAGCGGTGGTGGATGAGAAAGATGATGACGTGTCTGCGTCACTTTCCCTTTCCCTTTCATTCCCATTCCCAGACAAGGAACAACCTGGGAAACCTGTTTCAAAACCGGAGCAGCTTCTGCCTGAAAGACACCATGTGAATACATCACTGCTGCTCTTTGGGCGCTTGCCAGACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHD

Protein Analysis

1282

Amino Acids

141.01

Weight (kDa)

6.27

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000769)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02890 AT3G02890 AT3G02890 AT3G02890 AT5G16680 AT5G16680
fragaria_vesca FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220 FvH4_7g34220
malus_domestica MD01G1238900.v1.1 MD07G1310800.v1.1
prunus_persica Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1 Prupe.2G329000_v2.0.a1
pyrus_communis pycom01g24640 pycom07g28310
rosa_chinensis RchiOBHm_Chr1g0384581
rosa_laevigata RLG00000026030
rosa_multiflora Rmu_sc0006005.1_g000016
rosa_roxburghii Rroxscaffold_4G00276570
rosa_rugosa Rorug01G0449400 Rorug01G0449500
rosa_samantha Rh1AG474300 Rh1BG432300 Rh1CG445500 Rh1DG464900
rosa_wichuraiana Rw1G039830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 162
Acc36I ACCTGC 2 cut(s) 55, 377
AccB1I GGYRCC 2 cut(s) 961, 3499
AccB7I CCANNNNNTGG 1 cut(s) 2861
AccBSI CCGCTC 1 cut(s) 1102
AccI GTMKAC 2 cut(s) 1600, 2557
AccII CGCG 3 cut(s) 711, 1589, 3543
AciI CCGC 4 cut(s) 658, 1102, 1589, 3671
AclI AACGTT 1 cut(s) 2410
AclWI GGATC 3 cut(s) 261, 673, 1657
AcoI YGGCCR 3 cut(s) 142, 288, 2210
AcuI CTGAAG 5 cut(s) 1314, 1977, 2169, 2703, 2790
AdeI CACNNNGTG 1 cut(s) 3802
AflIII ACRYGT 3 cut(s) 886, 2483, 3696
AgeI ACCGGT 1 cut(s) 1677
AhlI ACTAGT 1 cut(s) 1217
AjiI CACGTC 3 cut(s) 1826, 3464, 3697
AjnI CCWGG 3 cut(s) 1517, 1954, 3751
AjuI GAANNNNNNNTTGG 4 cut(s) 2811, 2843, 3304, 3336
Alw21I GWGCWC 2 cut(s) 703, 1529
Alw26I GTCTC 4 cut(s) 595, 1183, 2474, 3147
AlwI GGATC 3 cut(s) 261, 673, 1657
AlwNI CAGNNNCTG 4 cut(s) 56, 794, 3365, 3784
Ama87I CYCGRG 2 cut(s) 1783, 3560
AoxI GGCC 7 cut(s) 142, 288, 749, 822, 2210, 2638, 3482
ApaI GGGCCC 1 cut(s) 2642
ArsI GACNNNNNNTTYG 2 cut(s) 2582, 2614
AsiGI ACCGGT 1 cut(s) 1677
Asp700I GAANNNNTTC 3 cut(s) 900, 3229, 3512
AspLEI GCGC 2 cut(s) 2237, 3831
AspS9I GGNCC 7 cut(s) 175, 482, 822, 2143, 2638, 2639, 3482
AsuC2I CCSGG 1 cut(s) 3497
AsuII TTCGAA 1 cut(s) 1016
AsuNHI GCTAGC 2 cut(s) 1001, 3565
AvaI CYCGRG 2 cut(s) 1783, 3560
AvaII GGWCC 3 cut(s) 175, 482, 2143
BaeGI GKGCMC 2 cut(s) 966, 2642
BalI TGGCCA 2 cut(s) 144, 2212
BanI GGYRCC 2 cut(s) 961, 3499
BanII GRGCYC 2 cut(s) 1529, 2642
BarI GAAGNNNNNNTAC 4 cut(s) 1461, 1493, 1618, 1650
BauI CACGAG 2 cut(s) 1206, 1302
BbsI GAAGAC 5 cut(s) 708, 1755, 2024, 2804, 2838
Bbv12I GWGCWC 2 cut(s) 703, 1529
BceAI ACGGC 2 cut(s) 1094, 2960
BciT130I CCWGG 3 cut(s) 1519, 1956, 3753
BcnI CCSGG 1 cut(s) 3497
BcoDI GTCTC 4 cut(s) 595, 1183, 2474, 3147
BcuI ACTAGT 1 cut(s) 1217
BfmI CTRYAG 5 cut(s) 48, 1965, 2798, 3234, 3340
BfoI RGCGCY 2 cut(s) 2238, 3832
BfuAI ACCTGC 2 cut(s) 55, 377
BglII AGATCT 3 cut(s) 1072, 2275, 2594
Bme1390I CCNGG 4 cut(s) 1519, 1956, 3497, 3753
Bme18I GGWCC 3 cut(s) 175, 482, 2143
BmeT110I CYCGRG 2 cut(s) 1783, 3560
BmgBI CACGTC 3 cut(s) 1826, 3464, 3697
BmgT120I GGNCC 7 cut(s) 175, 482, 822, 2143, 2638, 2639, 3482
BmrFI CCNGG 4 cut(s) 1519, 1956, 3497, 3753
BmrI ACTGGG 1 cut(s) 2871
BmsI GCATC 8 cut(s) 332, 373, 1211, 1621, 1678, 2141, 2305, 3374
BmtI GCTAGC 2 cut(s) 1005, 3569
BmuI ACTGGG 1 cut(s) 2871
BpiI GAAGAC 5 cut(s) 708, 1755, 2024, 2804, 2838
BpmI CTGGAG 1 cut(s) 2963
Bpu10I CCTNAGC 2 cut(s) 1006, 2562
Bpu14I TTCGAA 1 cut(s) 1016
BpuEI CTTGAG 3 cut(s) 1788, 2518, 3231
BpuMI CCSGG 1 cut(s) 3497
BsaBI GATNNNNATC 1 cut(s) 2676
BsaWI WCCGGW 2 cut(s) 1677, 3772
Bse118I RCCGGY 2 cut(s) 1677, 3484
Bse1I ACTGG 2 cut(s) 2866, 2961
Bse8I GATNNNNATC 1 cut(s) 2676
BseBI CCWGG 3 cut(s) 1519, 1956, 3753
BseJI GATNNNNATC 1 cut(s) 2676
BseMII CTCAG 4 cut(s) 782, 1020, 2192, 2388
BseNI ACTGG 2 cut(s) 2866, 2961
BseRI GAGGAG 4 cut(s) 1673, 3062, 3124, 3416
BseSI GKGCMC 2 cut(s) 966, 2642
BsgI GTGCAG 5 cut(s) 442, 453, 780, 1919, 2090
Bsh1236I CGCG 3 cut(s) 711, 1589, 3543
BshFI GGCC 7 cut(s) 144, 290, 751, 824, 2212, 2640, 3484
BshNI GGYRCC 2 cut(s) 961, 3499
BshTI ACCGGT 1 cut(s) 1677
BsiHKAI GWGCWC 2 cut(s) 703, 1529
BsiHKCI CYCGRG 2 cut(s) 1783, 3560
BsiSI CCGG 4 cut(s) 1678, 3485, 3497, 3773
BslFI GGGAC 4 cut(s) 161, 1128, 1852, 2129
BsmAI GTCTC 4 cut(s) 595, 1183, 2474, 3147
BsmFI GGGAC 4 cut(s) 161, 1128, 1852, 2129
BsmI GAATGC 1 cut(s) 506
BsnI GGCC 7 cut(s) 144, 290, 751, 824, 2212, 2640, 3484
BsoBI CYCGRG 2 cut(s) 1783, 3560
Bsp119I TTCGAA 1 cut(s) 1016
Bsp120I GGGCCC 1 cut(s) 2638
Bsp1286I GDGCHC 4 cut(s) 703, 966, 1529, 2642
Bsp1407I TGTACA 1 cut(s) 3469
Bsp143I GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
Bsp19I CCATGG 4 cut(s) 485, 1146, 3257, 3503
Bsp68I TCGCGA 1 cut(s) 3543
BspACI CCGC 4 cut(s) 658, 1102, 1589, 3671
BspANI GGCC 7 cut(s) 144, 290, 751, 824, 2212, 2640, 3484
BspCNI CTCAG 4 cut(s) 781, 1019, 2193, 2389
BspFNI CGCG 3 cut(s) 711, 1589, 3543
BspMAI CTGCAG 3 cut(s) 52, 2802, 3238
BspMI ACCTGC 2 cut(s) 55, 377
BspOI GCTAGC 2 cut(s) 1005, 3569
BspPI GGATC 3 cut(s) 261, 673, 1657
BspT104I TTCGAA 1 cut(s) 1016
BspT107I GGYRCC 2 cut(s) 961, 3499
BsrBI CCGCTC 1 cut(s) 1102
BsrFI RCCGGY 2 cut(s) 1677, 3484
BsrGI TGTACA 1 cut(s) 3469
BsrI ACTGG 2 cut(s) 2866, 2961
BssAI RCCGGY 2 cut(s) 1677, 3484
BssMI GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
BssNAI GTATAC 1 cut(s) 2558
BssSI CACGAG 2 cut(s) 1206, 1302
BssT1I CCWWGG 8 cut(s) 485, 825, 1146, 1834, 2652, 3144, 3257, 3503
Bst1107I GTATAC 1 cut(s) 2558
Bst2BI CACGAG 2 cut(s) 1206, 1302
Bst2UI CCWGG 3 cut(s) 1519, 1956, 3753
Bst4CI ACNGT 9 cut(s) 338, 1142, 1432, 1448, 1873, 1897, 1969, 2220, 2647
Bst6I CTCTTC 2 cut(s) 1861, 2885
BstAPI GCANNNNNTGC 2 cut(s) 313, 3784
BstAUI TGTACA 1 cut(s) 3469
BstBI TTCGAA 1 cut(s) 1016
BstDSI CCRYGG 4 cut(s) 485, 1146, 3257, 3503
BstEII GGTNACC 1 cut(s) 1673
BstFNI CGCG 3 cut(s) 711, 1589, 3543
BstH2I RGCGCY 2 cut(s) 2238, 3832
BstHHI GCGC 2 cut(s) 2237, 3831
BstKTI GATC 9 cut(s) 256, 668, 1075, 1504, 1665, 1750, 2278, 2335, 2597
BstMAI GTCTC 4 cut(s) 595, 1183, 2474, 3147
BstMBI GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
BstNI CCWGG 3 cut(s) 1519, 1956, 3753
BstNSI RCATGY 6 cut(s) 104, 307, 890, 935, 2487, 3399
BstPI GGTNACC 1 cut(s) 1673
BstSCI CCNGG 4 cut(s) 1517, 1954, 3495, 3751
BstSFI CTRYAG 5 cut(s) 48, 1965, 2798, 3234, 3340
BstSLI GKGCMC 2 cut(s) 966, 2642
BstUI CGCG 3 cut(s) 711, 1589, 3543
BstV2I GAAGAC 5 cut(s) 708, 1755, 2024, 2804, 2838
BstX2I RGATCY 4 cut(s) 1072, 1662, 2275, 2594
BstXI CCANNNNNNTGG 1 cut(s) 973
BstYI RGATCY 4 cut(s) 1072, 1662, 2275, 2594
BstZ17I GTATAC 1 cut(s) 2558
BsuRI GGCC 7 cut(s) 144, 290, 751, 824, 2212, 2640, 3484
BtgI CCRYGG 4 cut(s) 485, 1146, 3257, 3503
BtgZI GCGATG 1 cut(s) 2015
BtrI CACGTC 3 cut(s) 1826, 3464, 3697
BtsI GCAGTG 2 cut(s) 430, 3812
BtsIMutI CAGTG 6 cut(s) 343, 430, 1444, 1902, 1974, 3812
BtuMI TCGCGA 1 cut(s) 3543
BveI ACCTGC 2 cut(s) 55, 377
CaiI CAGNNNCTG 4 cut(s) 56, 794, 3365, 3784
CfoI GCGC 2 cut(s) 2237, 3831
Cfr10I RCCGGY 2 cut(s) 1677, 3484
Cfr13I GGNCC 7 cut(s) 175, 482, 822, 2143, 2638, 2639, 3482
CseI GACGC 2 cut(s) 228, 3693
CspAI ACCGGT 1 cut(s) 1677
DpnI GATC 9 cut(s) 255, 667, 1074, 1503, 1664, 1749, 2277, 2334, 2596
DpnII GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
DraI TTTAAA 3 cut(s) 925, 1884, 3091
DraIII CACNNNGTG 1 cut(s) 3802
EaeI YGGCCR 3 cut(s) 142, 288, 2210
Eam1104I CTCTTC 2 cut(s) 1861, 2885
EarI CTCTTC 2 cut(s) 1861, 2885
Ecl136II GAGCTC 1 cut(s) 1527
Eco130I CCWWGG 8 cut(s) 485, 825, 1146, 1834, 2652, 3144, 3257, 3503
Eco24I GRGCYC 2 cut(s) 1529, 2642
Eco47I GGWCC 3 cut(s) 175, 482, 2143
Eco53kI GAGCTC 1 cut(s) 1527
Eco57I CTGAAG 5 cut(s) 1314, 1977, 2169, 2703, 2790
Eco88I CYCGRG 2 cut(s) 1783, 3560
Eco91I GGTNACC 1 cut(s) 1673
EcoICRI GAGCTC 1 cut(s) 1527
EcoO109I RGGNCCY 3 cut(s) 175, 2143, 2639
EcoO65I GGTNACC 1 cut(s) 1673
EcoRI GAATTC 1 cut(s) 2106
EcoRII CCWGG 3 cut(s) 1517, 1954, 3751
EcoT14I CCWWGG 8 cut(s) 485, 825, 1146, 1834, 2652, 3144, 3257, 3503
EcoT38I GRGCYC 2 cut(s) 1529, 2642
ErhI CCWWGG 8 cut(s) 485, 825, 1146, 1834, 2652, 3144, 3257, 3503
FalI AAGNNNNNCTT 6 cut(s) 11, 43, 387, 419, 3371, 3403
FaqI GGGAC 4 cut(s) 161, 1128, 1852, 2129
FauI CCCGC 1 cut(s) 651
FauNDI CATATG 2 cut(s) 2552, 2634
FblI GTMKAC 2 cut(s) 1600, 2557
FriOI GRGCYC 2 cut(s) 1529, 2642
GlaI GCGC 2 cut(s) 2236, 3830
GsuI CTGGAG 1 cut(s) 2963
HaeII RGCGCY 2 cut(s) 2238, 3832
HaeIII GGCC 7 cut(s) 144, 290, 751, 824, 2212, 2640, 3484
HapII CCGG 4 cut(s) 1678, 3485, 3497, 3773
HgaI GACGC 2 cut(s) 228, 3693
HhaI GCGC 2 cut(s) 2237, 3831
Hin6I GCGC 2 cut(s) 2235, 3829
HinP1I GCGC 2 cut(s) 2235, 3829
HincII GTYRAC 2 cut(s) 3172, 3643
HindII GTYRAC 2 cut(s) 3172, 3643
HindIII AAGCTT 1 cut(s) 727
HpaI GTTAAC 1 cut(s) 3643
HpaII CCGG 4 cut(s) 1678, 3485, 3497, 3773
Hpy166II GTNNAC 9 cut(s) 510, 584, 1601, 2124, 2158, 2558, 2710, 3172, 3643
Hpy8I GTNNAC 9 cut(s) 510, 584, 1601, 2124, 2158, 2558, 2710, 3172, 3643
HpyAV CCTTC 9 cut(s) 639, 816, 943, 1301, 1932, 2595, 2765, 3539, 3622
HpyCH4III ACNGT 9 cut(s) 338, 1142, 1432, 1448, 1873, 1897, 1969, 2220, 2647
HpyCH4IV ACGT 7 cut(s) 799, 860, 1825, 2410, 3207, 3463, 3696
HpySE526I ACGT 7 cut(s) 799, 860, 1825, 2410, 3207, 3463, 3696
HspAI GCGC 2 cut(s) 2235, 3829
KflI GGGWCCC 1 cut(s) 175
KspAI GTTAAC 1 cut(s) 3643
Kzo9I GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
LmnI GCTCC 6 cut(s) 631, 1427, 1645, 2524, 2879, 3775
LweI GCATC 8 cut(s) 332, 373, 1211, 1621, 1678, 2141, 2305, 3374
MaeII ACGT 7 cut(s) 799, 860, 1825, 2410, 3207, 3463, 3696
MalI GATC 9 cut(s) 255, 667, 1074, 1503, 1664, 1749, 2277, 2334, 2596
MbiI CCGCTC 1 cut(s) 1102
MboI GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
MflI RGATCY 4 cut(s) 1072, 1662, 2275, 2594
MhlI GDGCHC 4 cut(s) 703, 966, 1529, 2642
MlsI TGGCCA 2 cut(s) 144, 2212
MluNI TGGCCA 2 cut(s) 144, 2212
MlyI GAGTC 7 cut(s) 134, 722, 1769, 1775, 1847, 3177, 3532
MmeI TCCRAC 5 cut(s) 2292, 2393, 2766, 2879, 2901
Mox20I TGGCCA 2 cut(s) 144, 2212
MroXI GAANNNNTTC 3 cut(s) 900, 3229, 3512
MscI TGGCCA 2 cut(s) 144, 2212
MslI CAYNNNNRTG 7 cut(s) 490, 620, 891, 1449, 1986, 2571, 3281
Msp20I TGGCCA 2 cut(s) 144, 2212
MspA1I CMGCKG 1 cut(s) 3671
MspI CCGG 4 cut(s) 1678, 3485, 3497, 3773
MspR9I CCNGG 4 cut(s) 1519, 1956, 3497, 3753
Mva1269I GAATGC 1 cut(s) 506
MvaI CCWGG 3 cut(s) 1519, 1956, 3753
MvnI CGCG 3 cut(s) 711, 1589, 3543
NciI CCSGG 1 cut(s) 3497
NcoI CCATGG 4 cut(s) 485, 1146, 3257, 3503
NdeI CATATG 2 cut(s) 2552, 2634
NdeII GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
NheI GCTAGC 2 cut(s) 1001, 3565
NmuCI GTSAC 5 cut(s) 260, 1193, 1426, 2908, 3705
NruI TCGCGA 1 cut(s) 3543
NspI RCATGY 6 cut(s) 104, 307, 890, 935, 2487, 3399
NspV TTCGAA 1 cut(s) 1016
PaeR7I CTCGAG 2 cut(s) 1783, 3560
PciI ACATGT 2 cut(s) 886, 2483
PcsI WCGNNNNNNNCGW 1 cut(s) 857
PctI GAATGC 1 cut(s) 506
PdmI GAANNNNTTC 3 cut(s) 900, 3229, 3512
PflFI GACNNNGTC 1 cut(s) 2539
PflMI CCANNNNNTGG 1 cut(s) 2861
PinAI ACCGGT 1 cut(s) 1677
PleI GAGTC 7 cut(s) 133, 721, 1768, 1775, 1847, 3176, 3532
PpsI GAGTC 7 cut(s) 133, 721, 1768, 1775, 1847, 3176, 3532
PpuMI RGGWCCY 2 cut(s) 175, 2143
PscI ACATGT 2 cut(s) 886, 2483
PsiI TTATAA 1 cut(s) 162
Psp124BI GAGCTC 1 cut(s) 1529
Psp1406I AACGTT 1 cut(s) 2410
Psp5II RGGWCCY 2 cut(s) 175, 2143
Psp6I CCWGG 3 cut(s) 1517, 1954, 3751
PspEI GGTNACC 1 cut(s) 1673
PspGI CCWGG 3 cut(s) 1517, 1954, 3751
PspOMI GGGCCC 1 cut(s) 2638
PspPI GGNCC 7 cut(s) 175, 482, 822, 2143, 2638, 2639, 3482
PspPPI RGGWCCY 2 cut(s) 175, 2143
PspXI VCTCGAGB 2 cut(s) 1783, 3560
PsrI GAACNNNNNNTAC 2 cut(s) 1935, 1967
PstI CTGCAG 3 cut(s) 52, 2802, 3238
PstNI CAGNNNCTG 4 cut(s) 56, 794, 3365, 3784
PsuI RGATCY 4 cut(s) 1072, 1662, 2275, 2594
PsyI GACNNNGTC 1 cut(s) 2539
RruI TCGCGA 1 cut(s) 3543
RseI CAYNNNNRTG 7 cut(s) 490, 620, 891, 1449, 1986, 2571, 3281
SacI GAGCTC 1 cut(s) 1529
Sau3AI GATC 9 cut(s) 253, 665, 1072, 1501, 1662, 1747, 2275, 2332, 2594
Sau96I GGNCC 7 cut(s) 175, 482, 822, 2143, 2638, 2639, 3482
SbfI CCTGCAGG 1 cut(s) 2802
SchI GAGTC 7 cut(s) 134, 722, 1769, 1775, 1847, 3177, 3532
ScrFI CCNGG 4 cut(s) 1519, 1956, 3497, 3753
SdaI CCTGCAGG 1 cut(s) 2802
SduI GDGCHC 4 cut(s) 703, 966, 1529, 2642
SfaNI GCATC 8 cut(s) 332, 373, 1211, 1621, 1678, 2141, 2305, 3374
SfcI CTRYAG 5 cut(s) 48, 1965, 2798, 3234, 3340
Sfr274I CTCGAG 2 cut(s) 1783, 3560
SfuI TTCGAA 1 cut(s) 1016
SinI GGWCC 3 cut(s) 175, 482, 2143
SlaI CTCGAG 2 cut(s) 1783, 3560
SmiMI CAYNNNNRTG 7 cut(s) 490, 620, 891, 1449, 1986, 2571, 3281
SmlI CTYRAG 5 cut(s) 1783, 1803, 2497, 3246, 3560
SmoI CTYRAG 5 cut(s) 1783, 1803, 2497, 3246, 3560
SpeI ACTAGT 1 cut(s) 1217
Sse8387I CCTGCAGG 1 cut(s) 2802
SsiI CCGC 4 cut(s) 658, 1102, 1589, 3671
SspI AATATT 1 cut(s) 2251
SstI GAGCTC 1 cut(s) 1529
StyD4I CCNGG 4 cut(s) 1517, 1954, 3495, 3751
StyI CCWWGG 8 cut(s) 485, 825, 1146, 1834, 2652, 3144, 3257, 3503
TaaI ACNGT 9 cut(s) 338, 1142, 1432, 1448, 1873, 1897, 1969, 2220, 2647
TaiI ACGT 7 cut(s) 802, 863, 1828, 2413, 3210, 3466, 3699
TaqI TCGA 9 cut(s) 278, 391, 1016, 1746, 1784, 2815, 2965, 3291, 3561
TatI WGTACW 3 cut(s) 581, 2719, 3469
TscAI CASTG 6 cut(s) 343, 430, 1451, 1902, 1974, 3819
TseFI GTSAC 5 cut(s) 260, 1193, 1426, 2908, 3705
Tsp45I GTSAC 5 cut(s) 260, 1193, 1426, 2908, 3705
TspGWI ACGGA 5 cut(s) 231, 1414, 1836, 1996, 2213
TspRI CASTG 6 cut(s) 343, 430, 1451, 1902, 1974, 3819
Tth111I GACNNNGTC 1 cut(s) 2539
Van91I CCANNNNNTGG 1 cut(s) 2861
VpaK11BI GGWCC 3 cut(s) 175, 482, 2143
XbaI TCTAGA 1 cut(s) 3350
XceI RCATGY 6 cut(s) 104, 307, 890, 935, 2487, 3399
XhoI CTCGAG 2 cut(s) 1783, 3560
XmiI GTMKAC 2 cut(s) 1600, 2557
XmnI GAANNNNTTC 3 cut(s) 900, 3229, 3512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.