MD00G1006700.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
956105 .. 963512
7408 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1006700.v1.1.491

Sequence Viewer

Length: 3033 bp
ATGCTGCCCAAGAGCAGCAGCTTCTCTGCTCTACTGGTTATTGTTTTCAGCTGCAGCTTCAGCTTGCTGAGATTTTCTGAGTCTGTGGTGCCCCAGGATGAAATTGATGCTCTCCAAGAAATATCTAAAACGATGGGTGCAAATTATTGGAAGTTTAATGGCGATTCTTGCGAGATTGAATCTGTTGGGGTAACAGAAGAGCCACCAAAAGGAGCTGAGAGCAGTATTGGTTGTGAATGCAACAACACTGTCTGTCATGTCACAGAAATAGTACTCAAGGGTTATAGTCTACCCGGCATGCTTCCCCCTCAACTTGTCAAACTTCCTTACCTTAAACAAATTGATTTTGCTCTCAATTATCTAAATGGTACTATACCAAAAGAATGGGGTGCAATGCAGTTAACTTCAATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAGATTCCGAAGGAGTTGGGAAATATTACTACTCTTACATCCCTGGTTCTTGAAGCAAATCAATTCTCCGGAGTTGTTCCCCATGAGCTTGGAAGTTTAATCAACTTGGGAACTATGATGTTGTCCTCCAATCGTTTGACTGGAAACTTACCGATGACATTTTCTGGGCTAAGAAATTTGACAGACTTTAGAATAAACGACAACAACTTCAGTGGAACAATACCAGATTTTATACAGAATTGGAAACAACTCGAGAGATTAGAAATGCATGCAAGTGGGCTTCAGGGACCCATCCCTTCCAATATATCTCTTTTGATCAACTTAACAGAGTTGAGGATTAGCGATATAAATGGGACAGAGCAGGGTTTTCCAGTATTAAAAAGCACAACTGGCCTAGTAAGATTGGTTCTGAGAAACTGTAACATTTCTGGAGAGATTCCTCCATACGTCTGGACAATGCAAAACCTTGAAATGTTGGATGTCAGTTTTAACAAGTTAGTAGGGCAAATTCCAGCCACATTGAACTTAGAGCGTTTGAGATTCCTATTTGTAACTGGCAACTCTATGAGTGGAAGTGTACCAGACTCAGTCTTCAAGGATGGAAGTAACATTGATCTTTCGTACAATAACTTCACATGGCAAGGCCCCGAGAAACCTGCTTGTCAAGACAACATCAATCTAAACCTGAACTTGTTCCGGAGCTCTTCAAGAGAAAACAACTTAATGAGAGGTCTTCCATGCTTGAAGAATCTCGACTGTCCACGATTTTCAACTTGTTTGCATGTTAATTGTGGTGGAAATGACATCACTGTCGAAGGAAACAAAGGAAACATTTTGTATGAAGGAGACGGAGGAGTTGAAGGTGGCACTGCAGATGTTTTTTTAAATGATGCTTCTTATTGGGGATTTAGTAGCACTGGAGACTTCATGGATGACAACGATTTCCAGAATACACGCTACTCTGTATCTCTGGCATCTTCCAATATCTCTGGATTATACACAACAGCACGCATATCTCCACTTTCAATCACTTATTTCCATTATTGCTTAGAAAATGGTGACTATACTGTAACCCTTCACTTTGCGGAGATACAGTTTACAAATGACCAAACATATACGAGTCTTGGAAGGCGCATTTTTGATATCTATGTTCAGGATGAAGTATTGCGGAAGGATTTCAATATTGAAGAGGAGGCAAAGGTGGCTCAAAAGCCTGCAATAATACAACACAATGTCGGTGTGACAAATAATATCTTAGAGATCCGATTCTATTTCGCTGGTAAAGGCACAACAAGGATTCCTGACAGAGGAATATATGGTCCCCTTATCTCTGCTATTTCCGTGGAATCTGATTCCAGAGATTGCTCAAATGGTGGAAAAAAAAGAACTGCTCACATTGTCACTGGAGTCGTAGTAGGAGCATTTCTCCTAGTATTCATCATATTAGGGATCCTTTGGTGGAAAGGGTACTTGCCTTGCAAAAGGGGAAGGAAGAAAGATAGAGACGGACTTGATGGGCAGAGAGGGGGTTTTACTTTAAAACAACTAAAAGCAGCCACTAATGACTTCAATTATGATAACAAAATTGGAGAAGGTGGCTTTGGTCCTGTCTACAAGGGTCAATTGCCTGATGGTAGAGTGATAGCCGTTAAGCAGCTTTCGTCTATGTCAAGGCAAGGAAATCGTGAGTTCTTAAATGAGATGGGCATGATTTCTTGTTTGCAACATCCGAATCTTGTGAAACTTCATGGATGTTGTATCGAAGGAGGTCAGTTATTGTTGGTCTATGAGTACATGGAGAACAATAACCTTGCAAGAGCTTTGTTCGGCCGAGAAAATCATCTTAGATTGGACTGGGCAACAAGGCTTAAGATATGCATTGGGATAGCAAGAGGACTAGCTTTTCTCCATGAAGAATCTGTGCTTAAAATTGTTCACCGAGACATCAAAGCGACTAATGTGCTGCTTGATGAGGACTTGAACCCTAAAATATCCGACTTTGGATTGGCAAAACTTGATGAAGAGGAGAAGACGCACATAAGCACCCGAGTAGCTGGGACAATAGGATATATGGCACCAGAATACGCACTATGGGGTCACCTAACCTACAAAGCGGATGTTTACAGTTTTGGAGTAGTGGCCTTGGAAATCATCAGTGGGAAGAACAACAACAACTATATTCCGAGTGATGATTGGGTTTGCCTTTTAGATTGGGCTTGTCATTTGCAACAAACAGGTAACTTATTGGAGCTGATCGATGAGAAGTTAGGTTCCGAGGTTGACCAAAAAGAAGCAGAGATCATGGTTAAAGTAGCTCTCCTGTGCACAAATGCCTCTGCATCACTTAGGCCTAGCATGTCCGAGGCGGTGAGGATGCTTGAAGGACAAATCCCCGTCCCTGACGTGGTACCAGAACCGAGGACGTATAAGGAGGATTTGAGATTTAGGGCCATGAGAGACCTCCACCGCCAGCGGGGTGATCATAGCTCGAGTATTAGCCATACGCAAAATTCAATTACTGTCCATGCATTCGAATCTACCTCCACGACTGGCCTCGACTTCTCGGAAATCAACTCGGAATCAAGGCCCTCTTGA

Protein Analysis

1011

Amino Acids

112.11

Weight (kDa)

5.45

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 150 - 263 1e-07 Leucine-rich repeat region
Malectin PF11721 404 - 592 1.4e-36 Malectin domain
Pkinase PF00069 670 - 869 1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 671 - 938 6.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1247
Acc36I ACCTGC 1 cut(s) 1102
Acc65I GGTACC 1 cut(s) 2845
AccB1I GGYRCC 3 cut(s) 88, 2512, 2845
AccI GTMKAC 2 cut(s) 289, 2049
AccIII TCCGGA 2 cut(s) 506, 1134
AciI CCGC 6 cut(s) 1523, 1606, 2552, 2804, 2905, 2911
AclWI GGATC 3 cut(s) 1693, 1882, 1895
AcoI YGGCCR 1 cut(s) 2266
AcsI RAATTY 3 cut(s) 613, 945, 2947
AcuI CTGAAG 3 cut(s) 43, 631, 704
AfaI GTAC 7 cut(s) 273, 370, 1017, 1061, 1907, 2231, 2847
AfiI CCNNNNNNNGG 4 cut(s) 209, 1745, 2842, 2911
AflII CTTAAG 1 cut(s) 2306
AjiI CACGTC 1 cut(s) 2842
AjnI CCWGG 2 cut(s) 93, 480
AjuI GAANNNNNNNTTGG 2 cut(s) 2022, 2054
Alw21I GWGCWC 2 cut(s) 1142, 2765
Alw26I GTCTC 5 cut(s) 1278, 1353, 1935, 2373, 2889
Alw44I GTGCAC 1 cut(s) 2761
AlwI GGATC 3 cut(s) 1693, 1882, 1895
Ama87I CYCGRG 4 cut(s) 689, 1085, 2484, 2926
Aor13HI TCCGGA 2 cut(s) 506, 1134
AoxI GGCC 8 cut(s) 829, 1081, 2266, 2577, 2786, 2886, 2989, 3023
ApaLI GTGCAC 1 cut(s) 2761
ApeKI GCWGC 8 cut(s) 4, 15, 18, 51, 54, 1991, 2092, 2401
ApoI RAATTY 3 cut(s) 613, 945, 2947
Asp700I GAANNNNTTC 2 cut(s) 1130, 1613
Asp718I GGTACC 1 cut(s) 2845
AspLEI GCGC 1 cut(s) 1572
AspS9I GGNCC 6 cut(s) 725, 1082, 1757, 2042, 2886, 3024
AsuC2I CCSGG 1 cut(s) 294
AsuHPI GGTGA 5 cut(s) 1508, 2366, 2528, 2818, 2927
AsuII TTCGAA 1 cut(s) 2970
AvaI CYCGRG 4 cut(s) 689, 1085, 2484, 2926
AvaII GGWCC 3 cut(s) 725, 1757, 2042
BaeGI GKGCMC 2 cut(s) 93, 2765
BamHI GGATCC 1 cut(s) 1887
BanI GGYRCC 3 cut(s) 88, 2512, 2845
BanII GRGCYC 1 cut(s) 1142
BarI GAAGNNNNNNTAC 2 cut(s) 1052, 1084
BbsI GAAGAC 3 cut(s) 1021, 1163, 2474
Bbv12I GWGCWC 2 cut(s) 1142, 2765
BbvI GCAGC 7 cut(s) 27, 30, 38, 66, 2003, 2104, 2388
BccI CCATC 6 cut(s) 127, 737, 1031, 1946, 2063, 2134
BceAI ACGGC 1 cut(s) 2069
BcgI CGANNNNNNTGC 6 cut(s) 1076, 1110, 2102, 2136, 2380, 2414
BciT130I CCWGG 2 cut(s) 95, 482
BclI TGATCA 2 cut(s) 753, 2917
BcnI CCSGG 1 cut(s) 294
BcoDI GTCTC 5 cut(s) 1278, 1353, 1935, 2373, 2889
BfaI CTAG 4 cut(s) 833, 1868, 2336, 2790
BfmI CTRYAG 2 cut(s) 52, 1308
BfrI CTTAAG 1 cut(s) 2306
BfuAI ACCTGC 1 cut(s) 1102
BisI GCNGC 8 cut(s) 5, 16, 19, 52, 55, 1992, 2093, 2402
BlsI GCNGC 8 cut(s) 6, 17, 20, 53, 56, 1993, 2094, 2403
BmcAI AGTACT 1 cut(s) 273
Bme1390I CCNGG 3 cut(s) 95, 294, 482
Bme18I GGWCC 3 cut(s) 725, 1757, 2042
BmeT110I CYCGRG 4 cut(s) 689, 1085, 2484, 2926
BmgBI CACGTC 1 cut(s) 2842
BmgT120I GGNCC 6 cut(s) 725, 1082, 1757, 2042, 2886, 3024
BmiI GGNNCC 9 cut(s) 90, 726, 727, 1084, 1759, 1889, 2514, 2710, 2847
BmrFI CCNGG 3 cut(s) 95, 294, 482
BmrI ACTGGG 1 cut(s) 2302
BmsI GCATC 5 cut(s) 97, 1318, 1421, 2786, 2802
BmuI ACTGGG 1 cut(s) 2302
BpiI GAAGAC 3 cut(s) 1021, 1163, 2474
BplI GAGNNNNNCTC 2 cut(s) 1848, 1880
BpmI CTGGAG 3 cut(s) 888, 1377, 1863
Bpu14I TTCGAA 1 cut(s) 2970
BpuEI CTTGAG 1 cut(s) 260
BpuMI CCSGG 1 cut(s) 294
Bsa29I ATCGAT 1 cut(s) 2694
BsaI GGTCTC 1 cut(s) 2889
BsaJI CCNNGG 7 cut(s) 93, 480, 1779, 2580, 2712, 2799, 2855
BsaWI WCCGGW 2 cut(s) 506, 1134
BsaXI ACNNNNNCTCC 4 cut(s) 1517, 1547, 1836, 1866
Bsc4I CCNNNNNNNGG 4 cut(s) 209, 1745, 2842, 2911
Bse1I ACTGG 9 cut(s) 39, 583, 809, 832, 997, 1360, 1846, 2297, 2992
Bse3DI GCAATG 1 cut(s) 399
BseAI TCCGGA 2 cut(s) 506, 1134
BseBI CCWGG 2 cut(s) 95, 482
BseCI ATCGAT 1 cut(s) 2694
BseDI CCNNGG 7 cut(s) 93, 480, 1779, 2580, 2712, 2799, 2855
BseLI CCNNNNNNNGG 4 cut(s) 209, 1745, 2842, 2911
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 5 cut(s) 59, 69, 207, 839, 1038
BseNI ACTGG 9 cut(s) 39, 583, 809, 832, 997, 1360, 1846, 2297, 2992
BseRI GAGGAG 3 cut(s) 1305, 1643, 2477
BseSI GKGCMC 2 cut(s) 93, 2765
BseX3I CGGCCG 1 cut(s) 2266
BseXI GCAGC 7 cut(s) 27, 30, 38, 66, 2003, 2104, 2388
BseYI CCCAGC 1 cut(s) 2492
Bsh1285I CGRYCG 1 cut(s) 2269
BshFI GGCC 8 cut(s) 831, 1083, 2268, 2579, 2788, 2888, 2991, 3025
BshNI GGYRCC 3 cut(s) 88, 2512, 2845
BshVI ATCGAT 1 cut(s) 2694
BsiEI CGRYCG 1 cut(s) 2269
BsiHKAI GWGCWC 2 cut(s) 1142, 2765
BsiHKCI CYCGRG 4 cut(s) 689, 1085, 2484, 2926
BsiSI CCGG 3 cut(s) 294, 507, 1135
BslFI GGGAC 5 cut(s) 738, 805, 1743, 2509, 2819
BslI CCNNNNNNNGG 4 cut(s) 209, 1745, 2842, 2911
BsmAI GTCTC 5 cut(s) 1278, 1353, 1935, 2373, 2889
BsmBI CGTCTC 2 cut(s) 1278, 1935
BsmFI GGGAC 5 cut(s) 738, 805, 1743, 2509, 2819
BsmI GAATGC 2 cut(s) 242, 2966
BsnI GGCC 8 cut(s) 831, 1083, 2268, 2579, 2788, 2888, 2991, 3025
Bso31I GGTCTC 1 cut(s) 2889
BsoBI CYCGRG 4 cut(s) 689, 1085, 2484, 2926
Bsp119I TTCGAA 1 cut(s) 2970
Bsp1286I GDGCHC 3 cut(s) 93, 1142, 2765
Bsp13I TCCGGA 2 cut(s) 506, 1134
Bsp143I GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
BspACI CCGC 6 cut(s) 1523, 1606, 2552, 2804, 2905, 2911
BspANI GGCC 8 cut(s) 831, 1083, 2268, 2579, 2788, 2888, 2991, 3025
BspCNI CTCAG 5 cut(s) 60, 70, 208, 840, 1037
BspDI ATCGAT 1 cut(s) 2694
BspEI TCCGGA 2 cut(s) 506, 1134
BspLI GGNNCC 9 cut(s) 90, 726, 727, 1084, 1759, 1889, 2514, 2710, 2847
BspMAI CTGCAG 2 cut(s) 56, 1312
BspMI ACCTGC 1 cut(s) 1102
BspPI GGATC 3 cut(s) 1693, 1882, 1895
BspQI GCTCTTC 2 cut(s) 192, 1147
BspT104I TTCGAA 1 cut(s) 2970
BspT107I GGYRCC 3 cut(s) 88, 2512, 2845
BspTI CTTAAG 1 cut(s) 2306
BspTNI GGTCTC 1 cut(s) 2889
BsrDI GCAATG 1 cut(s) 399
BsrI ACTGG 9 cut(s) 39, 583, 809, 832, 997, 1360, 1846, 2297, 2992
BssECI CCNNGG 7 cut(s) 93, 480, 1779, 2580, 2712, 2799, 2855
BssMI GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
BssT1I CCWWGG 1 cut(s) 2580
Bst2UI CCWGG 2 cut(s) 95, 482
Bst4CI ACNGT 8 cut(s) 250, 857, 1196, 1249, 1507, 1533, 2564, 2959
Bst6I CTCTTC 5 cut(s) 192, 420, 1147, 1620, 2454
BstAFI CTTAAG 1 cut(s) 2306
BstBI TTCGAA 1 cut(s) 2970
BstC8I GCNNGC 6 cut(s) 65, 299, 708, 1447, 1653, 2909
BstDSI CCRYGG 1 cut(s) 1779
BstEII GGTNACC 1 cut(s) 2534
BstENI CCTNNNNNAGG 1 cut(s) 1743
BstHHI GCGC 1 cut(s) 1572
BstKTI GATC 7 cut(s) 756, 1054, 1701, 1890, 2694, 2739, 2920
BstMAI GTCTC 5 cut(s) 1278, 1353, 1935, 2373, 2889
BstMBI GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
BstMCI CGRYCG 1 cut(s) 2269
BstMWI GCNNNNNNNGC 4 cut(s) 60, 168, 828, 1640
BstNI CCWGG 2 cut(s) 95, 482
BstNSI RCATGY 4 cut(s) 301, 710, 1223, 2797
BstPI GGTNACC 1 cut(s) 2534
BstSCI CCNGG 3 cut(s) 93, 292, 480
BstSFI CTRYAG 2 cut(s) 52, 1308
BstSLI GKGCMC 2 cut(s) 93, 2765
BstV1I GCAGC 7 cut(s) 27, 30, 38, 66, 2003, 2104, 2388
BstV2I GAAGAC 3 cut(s) 1021, 1163, 2474
BstX2I RGATCY 2 cut(s) 1698, 1887
BstXI CCANNNNNNTGG 3 cut(s) 384, 527, 888
BstYI RGATCY 2 cut(s) 1698, 1887
BstZI CGGCCG 1 cut(s) 2266
Bsu15I ATCGAT 1 cut(s) 2694
BsuRI GGCC 8 cut(s) 831, 1083, 2268, 2579, 2788, 2888, 2991, 3025
BsuTUI ATCGAT 1 cut(s) 2694
BtgI CCRYGG 1 cut(s) 1779
BtrI CACGTC 1 cut(s) 2842
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 7 cut(s) 246, 655, 1245, 1305, 1353, 1839, 2599
BveI ACCTGC 1 cut(s) 1102
Cac8I GCNNGC 6 cut(s) 65, 299, 708, 1447, 1653, 2909
CfoI GCGC 1 cut(s) 1572
Cfr13I GGNCC 6 cut(s) 725, 1082, 1757, 2042, 2886, 3024
ClaI ATCGAT 1 cut(s) 2694
CseI GACGC 1 cut(s) 2479
Csp6I GTAC 7 cut(s) 272, 369, 1016, 1060, 1906, 2230, 2846
CspCI CAANNNNNGTGG 2 cut(s) 631, 666
CviQI GTAC 7 cut(s) 272, 369, 1016, 1060, 1906, 2230, 2846
DpnI GATC 7 cut(s) 755, 1053, 1700, 1889, 2693, 2738, 2919
DpnII GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
DraI TTTAAA 2 cut(s) 1323, 1977
DrdI GACNNNNNNGTC 1 cut(s) 1247
DseDI GACNNNNNNGTC 1 cut(s) 1247
EaeI YGGCCR 1 cut(s) 2266
EagI CGGCCG 1 cut(s) 2266
Eam1104I CTCTTC 5 cut(s) 192, 420, 1147, 1620, 2454
EarI CTCTTC 5 cut(s) 192, 420, 1147, 1620, 2454
Ecl136II GAGCTC 1 cut(s) 1140
EclXI CGGCCG 1 cut(s) 2266
Eco130I CCWWGG 1 cut(s) 2580
Eco147I AGGCCT 1 cut(s) 2788
Eco24I GRGCYC 1 cut(s) 1142
Eco31I GGTCTC 1 cut(s) 2889
Eco32I GATATC 1 cut(s) 1582
Eco47I GGWCC 3 cut(s) 725, 1757, 2042
Eco52I CGGCCG 1 cut(s) 2266
Eco53kI GAGCTC 1 cut(s) 1140
Eco57I CTGAAG 3 cut(s) 43, 631, 704
Eco88I CYCGRG 4 cut(s) 689, 1085, 2484, 2926
Eco91I GGTNACC 1 cut(s) 2534
EcoICRI GAGCTC 1 cut(s) 1140
EcoNI CCTNNNNNAGG 1 cut(s) 1743
EcoO109I RGGNCCY 3 cut(s) 725, 1082, 3024
EcoO65I GGTNACC 1 cut(s) 2534
EcoRII CCWGG 2 cut(s) 93, 480
EcoRV GATATC 1 cut(s) 1582
EcoT14I CCWWGG 1 cut(s) 2580
EcoT22I ATGCAT 3 cut(s) 708, 2318, 2968
EcoT38I GRGCYC 1 cut(s) 1142
ErhI CCWWGG 1 cut(s) 2580
Esp3I CGTCTC 2 cut(s) 1278, 1935
FalI AAGNNNNNCTT 1 cut(s) 3013
FaqI GGGAC 5 cut(s) 738, 805, 1743, 2509, 2819
FauI CCCGC 1 cut(s) 2904
FbaI TGATCA 2 cut(s) 753, 2917
FblI GTMKAC 2 cut(s) 289, 2049
Fnu4HI GCNGC 8 cut(s) 5, 16, 19, 52, 55, 1992, 2093, 2402
FriOI GRGCYC 1 cut(s) 1142
Fsp4HI GCNGC 8 cut(s) 5, 16, 19, 52, 55, 1992, 2093, 2402
FspBI CTAG 4 cut(s) 833, 1868, 2336, 2790
GlaI GCGC 1 cut(s) 1571
GluI GCNGC 8 cut(s) 5, 16, 19, 52, 55, 1992, 2093, 2402
GsaI CCCAGC 1 cut(s) 2496
GsuI CTGGAG 3 cut(s) 888, 1377, 1863
HaeIII GGCC 8 cut(s) 831, 1083, 2268, 2579, 2788, 2888, 2991, 3025
HapII CCGG 3 cut(s) 294, 507, 1135
HgaI GACGC 1 cut(s) 2479
HhaI GCGC 1 cut(s) 1572
Hin6I GCGC 1 cut(s) 1570
HinP1I GCGC 1 cut(s) 1570
HincII GTYRAC 2 cut(s) 402, 2719
HindII GTYRAC 2 cut(s) 402, 2719
HpaI GTTAAC 1 cut(s) 402
HpaII CCGG 3 cut(s) 294, 507, 1135
HphI GGTGA 5 cut(s) 1508, 2366, 2528, 2818, 2927
HpyCH4III ACNGT 8 cut(s) 250, 857, 1196, 1249, 1507, 1533, 2564, 2959
HpyCH4IV ACGT 3 cut(s) 885, 2841, 2861
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 168, 828, 1640
HpySE526I ACGT 3 cut(s) 885, 2841, 2861
HspAI GCGC 1 cut(s) 1570
KflI GGGWCCC 1 cut(s) 725
Kpn2I TCCGGA 2 cut(s) 506, 1134
KpnI GGTACC 1 cut(s) 2849
Ksp22I TGATCA 2 cut(s) 753, 2917
KspAI GTTAAC 1 cut(s) 402
Kzo9I GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
LguI GCTCTTC 2 cut(s) 192, 1147
LmnI GCTCC 4 cut(s) 212, 1137, 1856, 2686
Lsp1109I GCAGC 7 cut(s) 27, 30, 38, 66, 2003, 2104, 2388
LweI GCATC 5 cut(s) 97, 1318, 1421, 2786, 2802
MaeI CTAG 4 cut(s) 833, 1868, 2336, 2790
MaeII ACGT 3 cut(s) 885, 2841, 2861
MalI GATC 7 cut(s) 755, 1053, 1700, 1889, 2693, 2738, 2919
MboI GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
MfeI CAATTG 1 cut(s) 2060
MflI RGATCY 2 cut(s) 1698, 1887
MhlI GDGCHC 3 cut(s) 93, 1142, 2765
MlyI GAGTC 4 cut(s) 89, 1016, 1567, 1854
MmeI TCCRAC 2 cut(s) 894, 2457
Mph1103I ATGCAT 3 cut(s) 708, 2318, 2968
MroI TCCGGA 2 cut(s) 506, 1134
MroXI GAANNNNTTC 2 cut(s) 1130, 1613
MslI CAYNNNNRTG 1 cut(s) 711
MspA1I CMGCKG 2 cut(s) 51, 2911
MspCI CTTAAG 1 cut(s) 2306
MspI CCGG 3 cut(s) 294, 507, 1135
MspR9I CCNGG 3 cut(s) 95, 294, 482
MunI CAATTG 1 cut(s) 2060
Mva1269I GAATGC 2 cut(s) 242, 2966
MvaI CCWGG 2 cut(s) 95, 482
MwoI GCNNNNNNNGC 4 cut(s) 60, 168, 828, 1640
NciI CCSGG 1 cut(s) 294
NdeII GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
NlaIV GGNNCC 9 cut(s) 90, 726, 727, 1084, 1759, 1889, 2514, 2710, 2847
NmeAIII GCCGAG 1 cut(s) 2294
NmuCI GTSAC 5 cut(s) 259, 1496, 1678, 1837, 2534
NsiI ATGCAT 3 cut(s) 708, 2318, 2968
NspI RCATGY 4 cut(s) 301, 710, 1223, 2797
NspV TTCGAA 1 cut(s) 2970
PaeI GCATGC 2 cut(s) 301, 710
PaeR7I CTCGAG 2 cut(s) 689, 2926
PceI AGGCCT 1 cut(s) 2788
PciSI GCTCTTC 2 cut(s) 192, 1147
PctI GAATGC 2 cut(s) 242, 2966
PdmI GAANNNNTTC 2 cut(s) 1130, 1613
PflFI GACNNNGTC 1 cut(s) 1025
PkrI GCNGC 8 cut(s) 6, 17, 20, 53, 56, 1993, 2094, 2403
PleI GAGTC 4 cut(s) 88, 1016, 1566, 1853
PpsI GAGTC 4 cut(s) 88, 1016, 1566, 1853
PpuMI RGGWCCY 1 cut(s) 725
Psp124BI GAGCTC 1 cut(s) 1142
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 2 cut(s) 93, 480
PspEI GGTNACC 1 cut(s) 2534
PspFI CCCAGC 1 cut(s) 2492
PspGI CCWGG 2 cut(s) 93, 480
PspN4I GGNNCC 9 cut(s) 90, 726, 727, 1084, 1759, 1889, 2514, 2710, 2847
PspPI GGNCC 6 cut(s) 725, 1082, 1757, 2042, 2886, 3024
PspPPI RGGWCCY 1 cut(s) 725
PspXI VCTCGAGB 1 cut(s) 2926
PsrI GAACNNNNNNTAC 2 cut(s) 828, 860
PstI CTGCAG 2 cut(s) 56, 1312
PsuI RGATCY 2 cut(s) 1698, 1887
PsyI GACNNNGTC 1 cut(s) 1025
PvuII CAGCTG 1 cut(s) 51
RsaI GTAC 7 cut(s) 273, 370, 1017, 1061, 1907, 2231, 2847
RsaNI GTAC 7 cut(s) 272, 369, 1016, 1060, 1906, 2230, 2846
RseI CAYNNNNRTG 1 cut(s) 711
SacI GAGCTC 1 cut(s) 1142
SapI GCTCTTC 2 cut(s) 192, 1147
SatI GCNGC 8 cut(s) 5, 16, 19, 52, 55, 1992, 2093, 2402
Sau3AI GATC 7 cut(s) 753, 1051, 1698, 1887, 2691, 2736, 2917
Sau96I GGNCC 6 cut(s) 725, 1082, 1757, 2042, 2886, 3024
ScaI AGTACT 1 cut(s) 273
SchI GAGTC 4 cut(s) 89, 1016, 1567, 1854
ScrFI CCNGG 3 cut(s) 95, 294, 482
SduI GDGCHC 3 cut(s) 93, 1142, 2765
SfaNI GCATC 5 cut(s) 97, 1318, 1421, 2786, 2802
SfcI CTRYAG 2 cut(s) 52, 1308
Sfr274I CTCGAG 2 cut(s) 689, 2926
SfuI TTCGAA 1 cut(s) 2970
SinI GGWCC 3 cut(s) 725, 1757, 2042
SlaI CTCGAG 2 cut(s) 689, 2926
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 4 cut(s) 275, 689, 2306, 2926
SmoI CTYRAG 4 cut(s) 275, 689, 2306, 2926
SphI GCATGC 2 cut(s) 301, 710
SseBI AGGCCT 1 cut(s) 2788
SsiI CCGC 6 cut(s) 1523, 1606, 2552, 2804, 2905, 2911
SspI AATATT 2 cut(s) 463, 1621
SspMI CTAG 4 cut(s) 833, 1868, 2336, 2790
SstI GAGCTC 1 cut(s) 1142
StuI AGGCCT 1 cut(s) 2788
StyD4I CCNGG 3 cut(s) 93, 292, 480
StyI CCWWGG 1 cut(s) 2580
TaaI ACNGT 8 cut(s) 250, 857, 1196, 1249, 1507, 1533, 2564, 2959
TaiI ACGT 3 cut(s) 888, 2844, 2864
TaqI TCGA 8 cut(s) 690, 1191, 1251, 2199, 2694, 2927, 2970, 2994
TatI WGTACW 2 cut(s) 271, 2229
TscAI CASTG 7 cut(s) 253, 655, 1252, 1312, 1360, 1846, 2599
TseFI GTSAC 5 cut(s) 259, 1496, 1678, 1837, 2534
TseI GCWGC 8 cut(s) 4, 15, 18, 51, 54, 1991, 2092, 2401
Tsp45I GTSAC 5 cut(s) 259, 1496, 1678, 1837, 2534
TspDTI ATGAA 8 cut(s) 114, 1293, 1354, 1611, 1864, 2174, 2364, 2472
TspGWI ACGGA 3 cut(s) 1302, 1768, 1959
TspRI CASTG 7 cut(s) 253, 655, 1252, 1312, 1360, 1846, 2599
Tth111I GACNNNGTC 1 cut(s) 1025
Vha464I CTTAAG 1 cut(s) 2306
VneI GTGCAC 1 cut(s) 2761
VpaK11BI GGWCC 3 cut(s) 725, 1757, 2042
XagI CCTNNNNNAGG 1 cut(s) 1743
XapI RAATTY 3 cut(s) 613, 945, 2947
XceI RCATGY 4 cut(s) 301, 710, 1223, 2797
XhoI CTCGAG 2 cut(s) 689, 2926
XmiI GTMKAC 2 cut(s) 289, 2049
XmnI GAANNNNTTC 2 cut(s) 1130, 1613
XspI CTAG 4 cut(s) 833, 1868, 2336, 2790
ZrmI AGTACT 1 cut(s) 273
Zsp2I ATGCAT 3 cut(s) 708, 2318, 2968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.