Rh5AG092900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
8388322 .. 8395044
6723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG092900.1

Sequence Viewer

Length: 3018 bp
ATGGTGGCTGTTAACCACGTTCTTTGCTTCATTATTGCATTGATCTGCTTCAAGCTACTGGGACTTGCTGAATCTAAGGTGCCTCAAGAGGAAGTTGATGCTCTTCAAGAAATTATGACCAAAATGGGGGCAGTGTATTGGAAGTTTAATGAGGATACTTGCTGGATTGAAGTGGTTGGTCTAACAGAGTCACCACCAAAGGGATCTGAGCGCAGAATTGATTGTGAATGCCACTTCAAGAACAACACTGAATGTCATGTCATAAGATTAATGATCAAAGGTTATAGTTTACCTGGTTTGCTTCCACCTGAACTAATCAAGCTGCCTTACCTCCAGGAAATTGATTTTGCTTACAACTATCTCAGTGGTACAATACCACAGGAATGGGCTTCAATGAAATTGACTTATCTATCTGTATTTGTTAATCATCTATCCGGGGAAATTCCGAAGGAGTTGGGAAATATAAGAACTCTCACATACTTGAGCCTTGCAGCTAACCAATTTTCTGGCACTCTTCCTTCTGAGCTTGGTTATCTGGTCAATTTGCAATATTTGGTGCTTTCCTCTAATCGACTGACTGGAAACTTGCCAGATACATTTGCTGGGCTAAAAAATCTAAAAGATATCCGTTTAAGTGACAACAACTTTAATGGAACAATCCCGGACTGGGTGCAGAATTGGAAACAACTCAACATACTGGAAATGCATTCAAGTGGACTGGCCGGACCCATTCCATCAAATATTTCTGTTTTGACCAACTTGCATGACTTGAGGATTAGTGACATGGATGGGCCAAATCAGGAATTTCCTTTGCTGAGAAATATGACTGGAGTAGTAAGATTGATTTTGAGGAACTGTAACATTTTCGGAGAGATCCCCACATATATCTGGTCCATGAAGAATCTGGAAATGTTGGATCTCAGTTTCAACAAGTTAGCAGGTGAACTTTCATCCACCGCAAACATTACTGAGCGCCTGAAATTTGTCTTTCTAACTGGAAACCTGCTAGGTGGAACTGTGCCGGATTCACTCTTGCGTGATGGAAATAGTGTTGATGTGTCGTACAATAACTTCACACTGCAAGGCCCTGAGAGCCCTCCTTGTCAAGAACATAAGAATCTAAGTCTAAACTTGTTTCGAAGCTCCTCAAAGGAGAATGACTTAAGGAGTGTTCTTCCATGCTCGAAGAATTTTCACTGCCCACGATATTCAAACTGTATGCATGTCAATTGTGGTGGAAATGACATAACTGTCAAGGAAGAGAATAACTCAAAGGTCATGTATGAAGGCGATGGTGGAGTTGAAGGTGGTAGTGCAAAATATTTTAGAAATGACAAAAGTATGTGGGGATTCAGTAGCACTGGTGACTTCATGGATGTCTATGATTGGCAAAACACACGTTACTCTATGTCCGTGGCATCTTTGGGTCTCTCCGAGTTATATACAACAGCACGCATATCACCAATTTCACTTAGTTATTTCTACTATTGTTTAGAAAATGGGGTATACACTGTTTCTCTCCACTTTGCGGAGATTAAGATCACGAATGTCGGTACACATAGTCTTGGGAGGCGGTTTTTTGATATTTATGTTCAGGAGAGATTGGTTTGGAAGGATTTCAATATTGTGAATGAGGCAGGTATGGCTCAGAAAAGAGTAGTTAAACAATTATCTAATGTCAGTGTGACAAGTAATGTTTTAGAGATCCGATTCTACTGGGCTGGAAAAGGGACAATGAGGATTCCTGAGGGAGGAGATTACGGTCCCCTTATATCAGCTATTTCTGTGGTTTCTGATTTTAAACCTTGTGGAGGCTCTGGAACTTTGAAACTTGTTTATACTATTACGGGTGTTGGTGTTGGAGCACTATGCCTAATTCTCTTCATACTGGCGGTCCTTTGGTGGAAAGGATTCTTTCAAGGAAAAAGGGGGATTAAAAGAGGAGGAGATATCCAGACAGGGAATTTTTGTTTGAAAGAAATAAAAGCAGCCAGTGATGACTTTGATTCAGCAAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTGTTCAAGGGTCAGTTACCAAATGGTTCTTTGATAGCAATTAAGCAGCTCTCATCTAATTCAAAGCAAGGAAATCGTGAGTTCTTAAATGAGATGGGAATGATATCTTGTCTGCAACACCCGAATCTAGTGACACTGCATGGATGTTGTATTGAAGGGGATCAGTTATTGCTGGTGTACGAGTACATGGAAAACAATAGTCTTGCGCGTGCATTATATGGTCCAGAGAAGCATCAGCTAAAACTGGACTGGCCAACAAGGCTTAAGATCTGTATTGGAATAGCTAGAGGTTTAGCTTTTCTCCATGAAGAATCAAGACTCAAGATTGTCCACCGAGACATAAAAGCTACGAATGTGCTGCTGGATAGGGATTTGAACGCTAAAATATCTGACTTTGGATTGGCTAAGCTCGGTGAAGATGACAAATCACACATCAGCACTAGAATTGCTGGAACCCTAGGATATATGGCGCCAGAATATGCACTATGGGGTCACTTAACCTACAAGGCAGATGTTTACAGTTTCGGAGTTGTTGCCTTGGAAATTGTTAGCGGGAAGAGCAACAACAGCTATGTGCCAAATGACAGTTATCTCTGTCTCCTAGACTTTGCCTGGCACTTGCTACAGACTGGAAACTTGAAGGAGCTGGTTGATGAGAGGTTGGGGAATGAAGTCATTGATAAAGAAGCAGAACTTATTATTAAAATTGGTATGTTATGTACAAATGCATCTCCAACGCTTAGGCCTACGATGTCTGAGGTGGTGAGCATGCTTGAAGGACGAACAGCAGTGCCGAACATGACCCTGGAAGCAAGTTCCTATACCAAAGATTTGAGGTTCAACGCCTTGAGGGACCTCCAACGTCAAAGGAAAAGGCAAAGTTTAAGTGAAAGCCAGCCTCAGAATTTGCCAACCACCAAAACATTTTGCTCTTCCTCTACTTCAAGGTATGACTTGAGAGTTAGAACAGCTTAA

Protein Analysis

1005

Amino Acids

112.26

Weight (kDa)

6.58

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 150 - 259 1.5e-10 Leucine-rich repeat region
LRR_8 PF13855 156 - 216 2.6e-08 Leucine rich repeat
LRR_8 PF13855 181 - 237 5.5e-08 Leucine rich repeat
LRR_4 PF12799 181 - 222 2.6e-06 Leucine Rich repeats (2 copies)
Malectin PF11721 406 - 594 1e-38 Malectin domain
Pkinase PF00069 670 - 936 1.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 671 - 939 4.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 929
AasI GACNNNNNNGTC 1 cut(s) 1250
Acc36I ACCTGC 3 cut(s) 929, 1011, 1628
AccB1I GGYRCC 2 cut(s) 79, 2512
AccI GTMKAC 1 cut(s) 1506
AccII CGCG 1 cut(s) 2251
AciI CCGC 5 cut(s) 957, 1529, 1573, 1892, 2595
AclWI GGATC 5 cut(s) 211, 868, 924, 1699, 2211
AcoI YGGCCR 2 cut(s) 720, 2294
AcsI RAATTY 6 cut(s) 441, 803, 980, 1189, 1963, 2947
AcyI GRCGYC 1 cut(s) 2513
AfaI GTAC 6 cut(s) 370, 1064, 1555, 2222, 2228, 2764
AfiI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1528, 1751, 1811
AflII CTTAAG 2 cut(s) 1162, 2306
AflIII ACRYGT 1 cut(s) 1397
AjnI CCWGG 4 cut(s) 292, 333, 2654, 2847
AjuI GAANNNNNNNTTGG 2 cut(s) 2019, 2051
Alw21I GWGCWC 1 cut(s) 1867
Alw26I GTCTC 3 cut(s) 1433, 2373, 2645
AlwI GGATC 5 cut(s) 211, 868, 924, 1699, 2211
AoxI GGCC 5 cut(s) 720, 791, 1084, 2294, 2786
ApeKI GCWGC 5 cut(s) 322, 491, 1988, 2089, 2401
ApoI RAATTY 6 cut(s) 441, 803, 980, 1189, 1963, 2947
AseI ATTAAT 1 cut(s) 269
Asp700I GAANNNNTTC 2 cut(s) 1616, 1910
AspA2I CCTAGG 1 cut(s) 2500
AspLEI GCGC 4 cut(s) 213, 975, 2251, 2515
AspS9I GGNCC 9 cut(s) 725, 791, 891, 1085, 1763, 1894, 2039, 2264, 2896
AsuC2I CCSGG 2 cut(s) 436, 662
AsuHPI GGTGA 6 cut(s) 183, 953, 1376, 1452, 2468, 2818
AsuII TTCGAA 1 cut(s) 1138
AvaII GGWCC 7 cut(s) 725, 891, 1763, 1894, 2039, 2264, 2896
AvrII CCTAGG 1 cut(s) 2500
AxyI CCTNAGG 1 cut(s) 1746
BalI TGGCCA 1 cut(s) 2296
BanI GGYRCC 2 cut(s) 79, 2512
BanII GRGCYC 1 cut(s) 1097
BarI GAAGNNNNNNTAC 2 cut(s) 1055, 1087
Bbv12I GWGCWC 1 cut(s) 1867
BbvI GCAGC 5 cut(s) 309, 503, 2000, 2101, 2388
BccI CCATC 5 cut(s) 742, 782, 1034, 1286, 2131
BcgI CGANNNNNNTGC 4 cut(s) 2099, 2133, 2383, 2417
BciT130I CCWGG 4 cut(s) 294, 335, 2656, 2849
BciVI GTATCC 1 cut(s) 148
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 2 cut(s) 436, 662
BcoDI GTCTC 3 cut(s) 1433, 2373, 2645
BfaI CTAG 6 cut(s) 1007, 2171, 2328, 2484, 2501, 2645
BfmI CTRYAG 1 cut(s) 2666
BfoI RGCGCY 2 cut(s) 976, 2516
BfrI CTTAAG 2 cut(s) 1162, 2306
BfuAI ACCTGC 3 cut(s) 929, 1011, 1628
BfuI GTATCC 1 cut(s) 148
BglI GCCNNNNNGGC 1 cut(s) 2302
BglII AGATCT 1 cut(s) 2310
BisI GCNGC 5 cut(s) 323, 492, 1989, 2090, 2402
BlnI CCTAGG 1 cut(s) 2500
BlpI GCTNAGC 1 cut(s) 2448
BlsI GCNGC 5 cut(s) 324, 493, 1990, 2091, 2403
Bme1390I CCNGG 6 cut(s) 294, 335, 436, 662, 2656, 2849
Bme18I GGWCC 7 cut(s) 725, 891, 1763, 1894, 2039, 2264, 2896
BmgT120I GGNCC 9 cut(s) 725, 791, 891, 1085, 1763, 1894, 2039, 2264, 2896
BmiI GGNNCC 6 cut(s) 81, 727, 1765, 2497, 2514, 2897
BmrFI CCNGG 6 cut(s) 294, 335, 436, 662, 2656, 2849
BmrI ACTGGG 3 cut(s) 68, 676, 1726
BmsI GCATC 4 cut(s) 88, 1427, 2284, 2780
BmuI ACTGGG 3 cut(s) 68, 676, 1726
BplI GAGNNNNNCTC 2 cut(s) 1253, 1285
BpmI CTGGAG 2 cut(s) 317, 849
Bpu10I CCTNAGC 1 cut(s) 2783
Bpu1102I GCTNAGC 1 cut(s) 2448
Bpu14I TTCGAA 1 cut(s) 1138
BpuEI CTTGAG 5 cut(s) 69, 502, 790, 2348, 2911
BpuMI CCSGG 2 cut(s) 436, 662
BsaBI GATNNNNATC 1 cut(s) 1538
BsaHI GRCGYC 1 cut(s) 2513
BsaI GGTCTC 1 cut(s) 1433
BsaJI CCNNGG 5 cut(s) 435, 1413, 2500, 2580, 2847
Bsc4I CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1528, 1751, 1811
Bse21I CCTNAGG 1 cut(s) 1746
Bse8I GATNNNNATC 1 cut(s) 1538
BseBI CCWGG 4 cut(s) 294, 335, 2656, 2849
BseDI CCNNGG 5 cut(s) 435, 1413, 2500, 2580, 2847
BseGI GGATG 4 cut(s) 793, 950, 1381, 2192
BseJI GATNNNNATC 1 cut(s) 1538
BseLI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1528, 1751, 1811
BseRI GAGGAG 4 cut(s) 1135, 1767, 1956, 1959
BseXI GCAGC 5 cut(s) 309, 503, 2000, 2101, 2388
BseYI CCCAGC 1 cut(s) 602
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 1 cut(s) 2251
BshFI GGCC 5 cut(s) 722, 793, 1086, 2296, 2788
BshNI GGYRCC 2 cut(s) 79, 2512
BsiHKAI GWGCWC 1 cut(s) 1867
BsiSI CCGG 4 cut(s) 435, 662, 723, 1022
BslFI GGGAC 4 cut(s) 75, 1744, 1749, 2909
BslI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1528, 1751, 1811
BsmAI GTCTC 3 cut(s) 1433, 2373, 2645
BsmFI GGGAC 4 cut(s) 75, 1744, 1749, 2909
BsmI GAATGC 2 cut(s) 233, 706
BsnI GGCC 5 cut(s) 722, 793, 1086, 2296, 2788
Bso31I GGTCTC 1 cut(s) 1433
Bsp119I TTCGAA 1 cut(s) 1138
Bsp1286I GDGCHC 2 cut(s) 1097, 1867
Bsp1407I TGTACA 1 cut(s) 2762
Bsp143I GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
Bsp1720I GCTNAGC 1 cut(s) 2448
BspACI CCGC 5 cut(s) 957, 1529, 1573, 1892, 2595
BspANI GGCC 5 cut(s) 722, 793, 1086, 2296, 2788
BspFNI CGCG 1 cut(s) 2251
BspLI GGNNCC 6 cut(s) 81, 727, 1765, 2497, 2514, 2897
BspMI ACCTGC 3 cut(s) 929, 1011, 1628
BspPI GGATC 5 cut(s) 211, 868, 924, 1699, 2211
BspQI GCTCTTC 3 cut(s) 108, 2594, 2980
BspT104I TTCGAA 1 cut(s) 1138
BspT107I GGYRCC 2 cut(s) 79, 2512
BspTI CTTAAG 2 cut(s) 1162, 2306
BspTNI GGTCTC 1 cut(s) 1433
BsrGI TGTACA 1 cut(s) 2762
BssECI CCNNGG 5 cut(s) 435, 1413, 2500, 2580, 2847
BssMI GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
BssNAI GTATAC 1 cut(s) 1507
BssNI GRCGYC 1 cut(s) 2513
BssT1I CCWWGG 2 cut(s) 2500, 2580
Bst1107I GTATAC 1 cut(s) 1507
Bst2UI CCWGG 4 cut(s) 294, 335, 2656, 2849
Bst4CI ACNGT 8 cut(s) 857, 1018, 1217, 1252, 1513, 1763, 2564, 2630
Bst6I CTCTTC 6 cut(s) 108, 519, 1254, 1886, 2594, 2980
BstACI GRCGYC 1 cut(s) 2513
BstAFI CTTAAG 2 cut(s) 1162, 2306
BstAUI TGTACA 1 cut(s) 2762
BstBI TTCGAA 1 cut(s) 1138
BstC8I GCNNGC 4 cut(s) 1453, 2253, 2813, 2939
BstDSI CCRYGG 1 cut(s) 1413
BstENI CCTNNNNNAGG 2 cut(s) 1749, 1809
BstF5I GGATG 4 cut(s) 793, 950, 1381, 2192
BstFNI CGCG 1 cut(s) 2251
BstH2I RGCGCY 2 cut(s) 976, 2516
BstHHI GCGC 4 cut(s) 213, 975, 2251, 2515
BstKTI GATC 9 cut(s) 45, 206, 276, 876, 919, 1542, 1707, 2206, 2313
BstMAI GTCTC 3 cut(s) 1433, 2373, 2645
BstMBI GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
BstMWI GCNNNNNNNGC 5 cut(s) 1092, 1643, 2302, 2601, 2610
BstNI CCWGG 4 cut(s) 294, 335, 2656, 2849
BstNSI RCATGY 2 cut(s) 1226, 2815
BstSCI CCNGG 6 cut(s) 292, 333, 434, 660, 2654, 2847
BstSFI CTRYAG 1 cut(s) 2666
BstUI CGCG 1 cut(s) 2251
BstV1I GCAGC 5 cut(s) 309, 503, 2000, 2101, 2388
BstX2I RGATCY 5 cut(s) 203, 873, 916, 1704, 2310
BstXI CCANNNNNNTGG 2 cut(s) 384, 506
BstYI RGATCY 5 cut(s) 203, 873, 916, 1704, 2310
BstZ17I GTATAC 1 cut(s) 1507
Bsu36I CCTNAGG 1 cut(s) 1746
BsuI GTATCC 1 cut(s) 148
BsuRI GGCC 5 cut(s) 722, 793, 1086, 2296, 2788
BtgI CCRYGG 1 cut(s) 1413
BtgZI GCGATG 1 cut(s) 1305
BtsCI GGATG 4 cut(s) 793, 950, 1381, 2192
BtsI GCAGTG 5 cut(s) 138, 1076, 1195, 2177, 2838
BveI ACCTGC 3 cut(s) 929, 1011, 1628
Cac8I GCNNGC 4 cut(s) 1453, 2253, 2813, 2939
CfoI GCGC 4 cut(s) 213, 975, 2251, 2515
Cfr13I GGNCC 9 cut(s) 725, 791, 891, 1085, 1763, 1894, 2039, 2264, 2896
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 6 cut(s) 369, 1063, 1554, 2221, 2227, 2763
CspCI CAANNNNNGTGG 4 cut(s) 5, 40, 1216, 1251
CviQI GTAC 6 cut(s) 369, 1063, 1554, 2221, 2227, 2763
DinI GGCGCC 1 cut(s) 2514
DpnI GATC 9 cut(s) 44, 205, 275, 875, 918, 1541, 1706, 2205, 2312
DpnII GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
DraI TTTAAA 1 cut(s) 1801
DrdI GACNNNNNNGTC 1 cut(s) 1250
DseDI GACNNNNNNGTC 1 cut(s) 1250
EaeI YGGCCR 2 cut(s) 720, 2294
Eam1104I CTCTTC 6 cut(s) 108, 519, 1254, 1886, 2594, 2980
EarI CTCTTC 6 cut(s) 108, 519, 1254, 1886, 2594, 2980
Eco130I CCWWGG 2 cut(s) 2500, 2580
Eco147I AGGCCT 1 cut(s) 2788
Eco24I GRGCYC 1 cut(s) 1097
Eco31I GGTCTC 1 cut(s) 1433
Eco32I GATATC 3 cut(s) 625, 1951, 2148
Eco47I GGWCC 7 cut(s) 725, 891, 1763, 1894, 2039, 2264, 2896
Eco81I CCTNAGG 1 cut(s) 1746
EcoNI CCTNNNNNAGG 2 cut(s) 1749, 1809
EcoO109I RGGNCCY 2 cut(s) 1085, 2896
EcoRII CCWGG 4 cut(s) 292, 333, 2654, 2847
EcoRV GATATC 3 cut(s) 625, 1951, 2148
EcoT14I CCWWGG 2 cut(s) 2500, 2580
EcoT22I ATGCAT 3 cut(s) 708, 1224, 2773
EcoT38I GRGCYC 1 cut(s) 1097
EgeI GGCGCC 1 cut(s) 2514
EheI GGCGCC 1 cut(s) 2514
ErhI CCWWGG 2 cut(s) 2500, 2580
FalI AAGNNNNNCTT 2 cut(s) 2721, 2753
FaqI GGGAC 4 cut(s) 75, 1744, 1749, 2909
FauI CCCGC 1 cut(s) 2588
FbaI TGATCA 1 cut(s) 273
FblI GTMKAC 1 cut(s) 1506
Fnu4HI GCNGC 5 cut(s) 323, 492, 1989, 2090, 2402
FokI GGATG 4 cut(s) 800, 937, 1388, 2199
FriOI GRGCYC 1 cut(s) 1097
Fsp4HI GCNGC 5 cut(s) 323, 492, 1989, 2090, 2402
FspBI CTAG 6 cut(s) 1007, 2171, 2328, 2484, 2501, 2645
GlaI GCGC 4 cut(s) 212, 974, 2250, 2514
GluI GCNGC 5 cut(s) 323, 492, 1989, 2090, 2402
GsaI CCCAGC 1 cut(s) 606
GsuI CTGGAG 2 cut(s) 317, 849
HaeII RGCGCY 2 cut(s) 976, 2516
HaeIII GGCC 5 cut(s) 722, 793, 1086, 2296, 2788
HapII CCGG 4 cut(s) 435, 662, 723, 1022
HhaI GCGC 4 cut(s) 213, 975, 2251, 2515
Hin1I GRCGYC 1 cut(s) 2513
Hin6I GCGC 4 cut(s) 211, 973, 2249, 2513
HinP1I GCGC 4 cut(s) 211, 973, 2249, 2513
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HpaI GTTAAC 1 cut(s) 13
HpaII CCGG 4 cut(s) 435, 662, 723, 1022
HphI GGTGA 6 cut(s) 183, 953, 1376, 1452, 2468, 2818
Hpy166II GTNNAC 9 cut(s) 13, 290, 716, 944, 1507, 1556, 2221, 2374, 2560
Hpy8I GTNNAC 9 cut(s) 13, 290, 716, 944, 1507, 1556, 2221, 2374, 2560
HpyAV CCTTC 9 cut(s) 442, 528, 1280, 1298, 1606, 2021, 2192, 2677, 2813
HpyCH4III ACNGT 8 cut(s) 857, 1018, 1217, 1252, 1513, 1763, 2564, 2630
HpyCH4IV ACGT 3 cut(s) 18, 1399, 2905
HpyF10VI GCNNNNNNNGC 5 cut(s) 1092, 1643, 2302, 2601, 2610
HpySE526I ACGT 3 cut(s) 18, 1399, 2905
Hsp92I GRCGYC 1 cut(s) 2513
HspAI GCGC 4 cut(s) 211, 973, 2249, 2513
KasI GGCGCC 1 cut(s) 2512
Ksp22I TGATCA 1 cut(s) 273
KspAI GTTAAC 1 cut(s) 13
Kzo9I GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
LguI GCTCTTC 3 cut(s) 108, 2594, 2980
LmnI GCTCC 3 cut(s) 1148, 1862, 2686
Lsp1109I GCAGC 5 cut(s) 309, 503, 2000, 2101, 2388
LweI GCATC 4 cut(s) 88, 1427, 2284, 2780
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 6 cut(s) 1007, 2171, 2328, 2484, 2501, 2645
MaeII ACGT 3 cut(s) 18, 1399, 2905
MalI GATC 9 cut(s) 44, 205, 275, 875, 918, 1541, 1706, 2205, 2312
MboI GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
MfeI CAATTG 1 cut(s) 1228
MflI RGATCY 5 cut(s) 203, 873, 916, 1704, 2310
MhlI GDGCHC 2 cut(s) 1097, 1867
MlsI TGGCCA 1 cut(s) 2296
MluNI TGGCCA 1 cut(s) 2296
Mly113I GGCGCC 1 cut(s) 2513
MlyI GAGTC 2 cut(s) 197, 2355
MmeI TCCRAC 4 cut(s) 894, 1840, 2801, 2926
Mox20I TGGCCA 1 cut(s) 2296
Mph1103I ATGCAT 3 cut(s) 708, 1224, 2773
MroXI GAANNNNTTC 2 cut(s) 1616, 1910
MscI TGGCCA 1 cut(s) 2296
MslI CAYNNNNRTG 2 cut(s) 382, 711
Msp20I TGGCCA 1 cut(s) 2296
MspCI CTTAAG 2 cut(s) 1162, 2306
MspI CCGG 4 cut(s) 435, 662, 723, 1022
MspR9I CCNGG 6 cut(s) 294, 335, 436, 662, 2656, 2849
MunI CAATTG 1 cut(s) 1228
Mva1269I GAATGC 2 cut(s) 233, 706
MvaI CCWGG 4 cut(s) 294, 335, 2656, 2849
MvnI CGCG 1 cut(s) 2251
MwoI GCNNNNNNNGC 5 cut(s) 1092, 1643, 2302, 2601, 2610
NarI GGCGCC 1 cut(s) 2513
NciI CCSGG 2 cut(s) 436, 662
NdeII GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
NlaIV GGNNCC 6 cut(s) 81, 727, 1765, 2497, 2514, 2897
NmuCI GTSAC 7 cut(s) 189, 635, 779, 1364, 1684, 2173, 2534
NsiI ATGCAT 3 cut(s) 708, 1224, 2773
NspI RCATGY 2 cut(s) 1226, 2815
NspV TTCGAA 1 cut(s) 1138
PaeI GCATGC 1 cut(s) 2815
PaqCI CACCTGC 1 cut(s) 929
PceI AGGCCT 1 cut(s) 2788
PciSI GCTCTTC 3 cut(s) 108, 2594, 2980
PctI GAATGC 2 cut(s) 233, 706
PdmI GAANNNNTTC 2 cut(s) 1616, 1910
PfoI TCCNGGA 2 cut(s) 333, 660
PkrI GCNGC 5 cut(s) 324, 493, 1990, 2091, 2403
PleI GAGTC 2 cut(s) 196, 2355
PluTI GGCGCC 1 cut(s) 2516
PpsI GAGTC 2 cut(s) 196, 2355
PpuMI RGGWCCY 1 cut(s) 2896
PshBI ATTAAT 1 cut(s) 269
Psp5II RGGWCCY 1 cut(s) 2896
Psp6I CCWGG 4 cut(s) 292, 333, 2654, 2847
PspFI CCCAGC 1 cut(s) 602
PspGI CCWGG 4 cut(s) 292, 333, 2654, 2847
PspN4I GGNNCC 6 cut(s) 81, 727, 1765, 2497, 2514, 2897
PspPI GGNCC 9 cut(s) 725, 791, 891, 1085, 1763, 1894, 2039, 2264, 2896
PspPPI RGGWCCY 1 cut(s) 2896
PsuI RGATCY 5 cut(s) 203, 873, 916, 1704, 2310
RsaI GTAC 6 cut(s) 370, 1064, 1555, 2222, 2228, 2764
RsaNI GTAC 6 cut(s) 369, 1063, 1554, 2221, 2227, 2763
RseI CAYNNNNRTG 2 cut(s) 382, 711
SapI GCTCTTC 3 cut(s) 108, 2594, 2980
SatI GCNGC 5 cut(s) 323, 492, 1989, 2090, 2402
Sau3AI GATC 9 cut(s) 42, 203, 273, 873, 916, 1539, 1704, 2203, 2310
Sau96I GGNCC 9 cut(s) 725, 791, 891, 1085, 1763, 1894, 2039, 2264, 2896
SchI GAGTC 2 cut(s) 197, 2355
ScrFI CCNGG 6 cut(s) 294, 335, 436, 662, 2656, 2849
SduI GDGCHC 2 cut(s) 1097, 1867
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 4 cut(s) 88, 1427, 2284, 2780
SfcI CTRYAG 1 cut(s) 2666
SfoI GGCGCC 1 cut(s) 2514
SfuI TTCGAA 1 cut(s) 1138
SinI GGWCC 7 cut(s) 725, 891, 1763, 1894, 2039, 2264, 2896
SmiMI CAYNNNNRTG 2 cut(s) 382, 711
SmlI CTYRAG 8 cut(s) 84, 481, 769, 1162, 2306, 2363, 2890, 2998
SmoI CTYRAG 8 cut(s) 84, 481, 769, 1162, 2306, 2363, 2890, 2998
SphI GCATGC 1 cut(s) 2815
SseBI AGGCCT 1 cut(s) 2788
SsiI CCGC 5 cut(s) 957, 1529, 1573, 1892, 2595
SspDI GGCGCC 1 cut(s) 2512
SspI AATATT 4 cut(s) 551, 742, 1322, 1624
SspMI CTAG 6 cut(s) 1007, 2171, 2328, 2484, 2501, 2645
StuI AGGCCT 1 cut(s) 2788
StyD4I CCNGG 6 cut(s) 292, 333, 434, 660, 2654, 2847
StyI CCWWGG 2 cut(s) 2500, 2580
TaaI ACNGT 8 cut(s) 857, 1018, 1217, 1252, 1513, 1763, 2564, 2630
TaiI ACGT 3 cut(s) 21, 1402, 2908
TaqI TCGA 3 cut(s) 571, 1138, 1184
TatI WGTACW 2 cut(s) 2226, 2762
TseFI GTSAC 7 cut(s) 189, 635, 779, 1364, 1684, 2173, 2534
TseI GCWGC 5 cut(s) 322, 491, 1988, 2089, 2401
Tsp45I GTSAC 7 cut(s) 189, 635, 779, 1364, 1684, 2173, 2534
TspDTI ATGAA 9 cut(s) 19, 410, 911, 939, 1299, 1360, 1873, 2364, 2727
TspGWI ACGGA 2 cut(s) 617, 1402
Vha464I CTTAAG 2 cut(s) 1162, 2306
VpaK11BI GGWCC 7 cut(s) 725, 891, 1763, 1894, 2039, 2264, 2896
VspI ATTAAT 1 cut(s) 269
XagI CCTNNNNNAGG 2 cut(s) 1749, 1809
XapI RAATTY 6 cut(s) 441, 803, 980, 1189, 1963, 2947
XceI RCATGY 2 cut(s) 1226, 2815
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XmaJI CCTAGG 1 cut(s) 2500
XmiI GTMKAC 1 cut(s) 1506
XmnI GAANNNNTTC 2 cut(s) 1616, 1910
XspI CTAG 6 cut(s) 1007, 2171, 2328, 2484, 2501, 2645
Zsp2I ATGCAT 3 cut(s) 708, 1224, 2773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.