Rw5G008110

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8664212 .. 8670481
6270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008110.1

Sequence Viewer

Length: 3024 bp
ATGGTGGCTGTTAACCACGTTCTTTGCTTCATTATTGCATTGATCTGCTTCAAGCTACTGGGACTTGCTGAATCTAAGGTGCCTCAAGAGGAAGTTGATGCTCTTAAAGAAATTATGACCAAAATGGGGGCAGTGTATTGGAAGTTTAATGATGATACTTGCTGGATTGAAGTGGTTGGTCTAACAGAGTCACCACCAAAGGGATCTGAGCGCAGAATTGATTGTGAATGCTACTTCAAGAACAACACTGAATGTCATGTCATAAGATTAATGATCAAAGGTTATAGTTTACCTGGTTTGCTTCCACCTGAAGTAATCAAGCTGCCTTACCTCCAGGAAATTGATTTTGCTTACAACTATCTCAGTGGTACAATACCACAGGAATGGGCTTCAATGAAATTGACTTATCTATCTGTTTTTGTTAATCATCTATCCGGGGAAATTCCGAAGGAGTTGGGAAATATGAGAACTCTCACATACTTGAGCCTTGCAGCTAACCAATTTTCTGGCACTCTTCCTTCTGAGCTTGGTTATCTGGTCAATTTGCAATATTTGGTGCTTTCCTCTAATCGACTGACTGGAAACTTGCCAGATACATTTGCTGGGCTAAAAAATCTAAAAGATATCCGTTTAAGTGACAACAACTTTAATGGAACAATCCCGGACTGGGTGCAGAATTGGAAACAACTCAACATACTGGAAATGCATTCAAGTGGACTGGCCGGACCCATTCCATCAAATATTTCTGTTTTGACCAACTTGCATGACTTGAGGATTAGTGACATGGATGGGCCAAATCAGGAATTTCCTTTGCTGAGAAATATGACTGGAGTAGTAAGATTGATTTTGAGGAACTGTAACATTTTCGGAGAGATCCCCACATATATCTGGTCCATGAAGAATCTGGAAATGTTGGATCTCAGTTTCAACAAGTTAGCAGGTGAACTTTCATTCACCGCAGGCATTACCATTACTGAGCGCCTGAAATTTGTCTTTCTAACTGGAAACCTGCTAGGTGGAACTGTGCCGGATTCACTCTTGCGTGATGGAAATAGTGTTGATGTGTCGTACAATAACTTCACACTGCAAGGCCCTGAGAGCCCTCCTTGTCAAGAACATAAGAATCTAAGTCTAAACTTGTTTCGAAGCTCCTCAAAGAAGAATGACTTAAGGAGTGTTCTTCCATGCTCGAAGAATTTTCACTGCCCACGATATTCAAACTGTATGCATGTCAATTGTGGTGGAAATGACATAACTGTCAAGGAAGAGAATAACACAAAGGTCATGTATGAAGGCGATGGTGGAGTTGAAGGTGGTAGTGCAAAATATTTTAGAAATGACAAAAGTATGTGGGGATTCAGTAGCACTGGTGACTTCATGGATGTCTATGATTGGCAAAACACACGTTACTCTATGTCCGTGGCATCTTTGGGTCTCTCCGAGTTATATACAACAGCACGCATATCACCAATTTCACTTAGTTATTTCTACTATTGTTTAGAAAATGGGGTATACACTGTTACTCTCCACTTTGCGGAGATTAAGATCACGAATGTCGGTACACATAGTCTTGGGAGGCGGTTTTTTGATATTTATGTTCAGGAGAGATTGGTTTGGAAGGATTTCAATATTGTGAATGAGGCAGGTATGGCTCAGAAAAGAGTAGTTAAACAATTATCTAATGTCAGTGTGACAAGTAATGTTTTAGAGATCCGATTCTACTGGGCTGGAAAAGGGACAATGAGGATTCCTGAGGGAGGAGATTACGGTCCCCTTATATCAGCTATTTCTGTGGTTTCTGATTTTAAACCTTGTGGAGGCTCTGGAACTTTGAAACTTGTTTATACTATTACGGGTGTTGGTGTTGGAGCACTATGCCTAATTCTCTTCATACTGGCGGTCCTTTGGTGGAAAGGATTCTTTCAAGGAAAAAGGGGGATTAAAAGAGGAGGAGATATCCAGACAGGGAATTTTTGTTTGAAAGAAATAAAAGCAGCCAGTGATGACTTTGATTCAGCAAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTGTTCAAGGGTCAGTTACCAAATGGTTCTTTGATAGCAATTAAGCAGCTCTCATCTAATTCAAAGCAAGGAAATCGTGAGTTCTTAAATGAGATGGGAATGATATCTTGTCTGCAACACCCGAATCTAGTGATACTGCATGGATGTTGTATTGAAGGGGATCAGTTATTGCTGGTGTACGAGTACATGGAAAACAATAGTCTTGCGCGTGCATTATATGGTCCAGAGAAGCATCAGCTAAAACTGGACTGGCCAACAAGGCTTAAGATCTGTATTGGAATAGCTAGAGGTCTAGCTTTTCTCCATGAAGAATCAAGACTCAAGATTGTCCACCGAGACATAAAAGCTACGAATGTGCTGCTGGATAGGGATTTGAACGCTAAAATATCTGACTTTGGATTGGCTAAGCTCGGTGAAGATGACAAATCACACATCAGCACTAGAATTGCTGGAACCCTAGGATATATGGCGCCAGAATATGCACTATGGGGTCACTTAACCTACAAGGCAGATGTTTACAGTTTCGGAGTTGTTGCCTTGGAAATTGTTAGCGGGAAGAGCAACAACAGCTATGTGCCAAATGACAGTTATCTCTGTCTCCTAGACTTTGCCTGGCACTTGCTACAGACTGGAAACTTGAAGGAGCTGGTTGATGAGAGGTTGGGGAATGAAGTCATTGATAAAGAAGCAGAACTTATTATTAAAATTGGTATGTTATGTACAAATGCATCTCCAACGCTTAGGCCTACGATGTCTGAGGTGGTGAGCATGCTTGAAGGACGAACAGCAGTGCCGAACATGACCCTGGAAGCAAGTTCCTATACCAAAGATTTGAGGTTCAACGCCTTGAGGGACCTCCAACGCCAAAGGAAAAGGCAAAGTTTAAGTGAAAGCCAGCCTCAGAATTTGCCAACCACCAAAACATTTTGCTCTTCCTCTACTTCAAGGTATGACTTGAGAGTTAGAACAGCTTAA

Protein Analysis

1007

Amino Acids

112.53

Weight (kDa)

6.99

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 150 - 259 1e-10 Leucine-rich repeat region
LRR_8 PF13855 181 - 237 5.1e-08 Leucine rich repeat
LRR_4 PF12799 181 - 222 2.6e-06 Leucine Rich repeats (2 copies)
Malectin PF11721 408 - 596 6.6e-39 Malectin domain
Pkinase PF00069 672 - 938 7.7e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 673 - 941 1.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 929
AasI GACNNNNNNGTC 1 cut(s) 1256
Acc36I ACCTGC 3 cut(s) 929, 1017, 1634
AccB1I GGYRCC 2 cut(s) 79, 2518
AccI GTMKAC 1 cut(s) 1512
AccII CGCG 1 cut(s) 2257
AciI CCGC 5 cut(s) 957, 1535, 1579, 1898, 2601
AclWI GGATC 5 cut(s) 211, 868, 924, 1705, 2217
AcoI YGGCCR 2 cut(s) 720, 2300
AcsI RAATTY 6 cut(s) 441, 803, 986, 1195, 1969, 2953
AcuI CTGAAG 1 cut(s) 330
AcyI GRCGYC 1 cut(s) 2519
AfaI GTAC 6 cut(s) 370, 1070, 1561, 2228, 2234, 2770
AfiI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1534, 1757, 1817
AflII CTTAAG 2 cut(s) 1168, 2312
AflIII ACRYGT 1 cut(s) 1403
AjnI CCWGG 4 cut(s) 292, 333, 2660, 2853
AjuI GAANNNNNNNTTGG 2 cut(s) 2025, 2057
Alw21I GWGCWC 1 cut(s) 1873
Alw26I GTCTC 3 cut(s) 1439, 2379, 2651
AlwI GGATC 5 cut(s) 211, 868, 924, 1705, 2217
AoxI GGCC 5 cut(s) 720, 791, 1090, 2300, 2792
ApeKI GCWGC 5 cut(s) 322, 491, 1994, 2095, 2407
ApoI RAATTY 6 cut(s) 441, 803, 986, 1195, 1969, 2953
AseI ATTAAT 1 cut(s) 269
Asp700I GAANNNNTTC 2 cut(s) 1622, 1916
AspA2I CCTAGG 1 cut(s) 2506
AspLEI GCGC 4 cut(s) 213, 981, 2257, 2521
AspS9I GGNCC 9 cut(s) 725, 791, 891, 1091, 1769, 1900, 2045, 2270, 2902
AsuC2I CCSGG 2 cut(s) 436, 662
AsuHPI GGTGA 7 cut(s) 183, 946, 953, 1382, 1458, 2474, 2824
AsuII TTCGAA 1 cut(s) 1144
AvaII GGWCC 7 cut(s) 725, 891, 1769, 1900, 2045, 2270, 2902
AvrII CCTAGG 1 cut(s) 2506
AxyI CCTNAGG 1 cut(s) 1752
BalI TGGCCA 1 cut(s) 2302
BanI GGYRCC 2 cut(s) 79, 2518
BanII GRGCYC 1 cut(s) 1103
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
Bbv12I GWGCWC 1 cut(s) 1873
BbvI GCAGC 5 cut(s) 309, 503, 2006, 2107, 2394
BccI CCATC 5 cut(s) 742, 782, 1040, 1292, 2137
BcgI CGANNNNNNTGC 4 cut(s) 2105, 2139, 2389, 2423
BciT130I CCWGG 4 cut(s) 294, 335, 2662, 2855
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 2 cut(s) 436, 662
BcoDI GTCTC 3 cut(s) 1439, 2379, 2651
BfaI CTAG 7 cut(s) 1013, 2177, 2334, 2342, 2490, 2507, 2651
BfmI CTRYAG 1 cut(s) 2672
BfoI RGCGCY 2 cut(s) 982, 2522
BfrI CTTAAG 2 cut(s) 1168, 2312
BfuAI ACCTGC 3 cut(s) 929, 1017, 1634
BglI GCCNNNNNGGC 1 cut(s) 2308
BglII AGATCT 1 cut(s) 2316
BisI GCNGC 5 cut(s) 323, 492, 1995, 2096, 2408
BlnI CCTAGG 1 cut(s) 2506
BlpI GCTNAGC 1 cut(s) 2454
BlsI GCNGC 5 cut(s) 324, 493, 1996, 2097, 2409
Bme1390I CCNGG 6 cut(s) 294, 335, 436, 662, 2662, 2855
Bme18I GGWCC 7 cut(s) 725, 891, 1769, 1900, 2045, 2270, 2902
BmgT120I GGNCC 9 cut(s) 725, 791, 891, 1091, 1769, 1900, 2045, 2270, 2902
BmiI GGNNCC 6 cut(s) 81, 727, 1771, 2503, 2520, 2903
BmrFI CCNGG 6 cut(s) 294, 335, 436, 662, 2662, 2855
BmrI ACTGGG 3 cut(s) 68, 676, 1732
BmsI GCATC 4 cut(s) 88, 1433, 2290, 2786
BmuI ACTGGG 3 cut(s) 68, 676, 1732
BpmI CTGGAG 2 cut(s) 317, 849
Bpu10I CCTNAGC 1 cut(s) 2789
Bpu1102I GCTNAGC 1 cut(s) 2454
Bpu14I TTCGAA 1 cut(s) 1144
BpuEI CTTGAG 5 cut(s) 69, 502, 790, 2354, 2917
BpuMI CCSGG 2 cut(s) 436, 662
BsaBI GATNNNNATC 1 cut(s) 1544
BsaHI GRCGYC 1 cut(s) 2519
BsaI GGTCTC 1 cut(s) 1439
BsaJI CCNNGG 5 cut(s) 435, 1419, 2506, 2586, 2853
Bsc4I CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1534, 1757, 1817
Bse21I CCTNAGG 1 cut(s) 1752
Bse8I GATNNNNATC 1 cut(s) 1544
BseBI CCWGG 4 cut(s) 294, 335, 2662, 2855
BseDI CCNNGG 5 cut(s) 435, 1419, 2506, 2586, 2853
BseGI GGATG 3 cut(s) 793, 1387, 2198
BseJI GATNNNNATC 1 cut(s) 1544
BseLI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1534, 1757, 1817
BseRI GAGGAG 4 cut(s) 1141, 1773, 1962, 1965
BseXI GCAGC 5 cut(s) 309, 503, 2006, 2107, 2394
BseYI CCCAGC 1 cut(s) 602
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 1 cut(s) 2257
BshFI GGCC 5 cut(s) 722, 793, 1092, 2302, 2794
BshNI GGYRCC 2 cut(s) 79, 2518
BsiHKAI GWGCWC 1 cut(s) 1873
BsiSI CCGG 4 cut(s) 435, 662, 723, 1028
BslFI GGGAC 4 cut(s) 75, 1750, 1755, 2915
BslI CCNNNNNNNGG 6 cut(s) 126, 200, 667, 1534, 1757, 1817
BsmAI GTCTC 3 cut(s) 1439, 2379, 2651
BsmFI GGGAC 4 cut(s) 75, 1750, 1755, 2915
BsmI GAATGC 2 cut(s) 233, 706
BsnI GGCC 5 cut(s) 722, 793, 1092, 2302, 2794
Bso31I GGTCTC 1 cut(s) 1439
Bsp119I TTCGAA 1 cut(s) 1144
Bsp1286I GDGCHC 2 cut(s) 1103, 1873
Bsp1407I TGTACA 1 cut(s) 2768
Bsp143I GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
Bsp1720I GCTNAGC 1 cut(s) 2454
BspACI CCGC 5 cut(s) 957, 1535, 1579, 1898, 2601
BspANI GGCC 5 cut(s) 722, 793, 1092, 2302, 2794
BspFNI CGCG 1 cut(s) 2257
BspLI GGNNCC 6 cut(s) 81, 727, 1771, 2503, 2520, 2903
BspMI ACCTGC 3 cut(s) 929, 1017, 1634
BspPI GGATC 5 cut(s) 211, 868, 924, 1705, 2217
BspQI GCTCTTC 2 cut(s) 2600, 2986
BspT104I TTCGAA 1 cut(s) 1144
BspT107I GGYRCC 2 cut(s) 79, 2518
BspTI CTTAAG 2 cut(s) 1168, 2312
BspTNI GGTCTC 1 cut(s) 1439
BsrGI TGTACA 1 cut(s) 2768
BssECI CCNNGG 5 cut(s) 435, 1419, 2506, 2586, 2853
BssMI GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
BssNAI GTATAC 1 cut(s) 1513
BssNI GRCGYC 1 cut(s) 2519
BssT1I CCWWGG 2 cut(s) 2506, 2586
Bst1107I GTATAC 1 cut(s) 1513
Bst2UI CCWGG 4 cut(s) 294, 335, 2662, 2855
Bst4CI ACNGT 8 cut(s) 857, 1024, 1223, 1258, 1519, 1769, 2570, 2636
Bst6I CTCTTC 5 cut(s) 519, 1260, 1892, 2600, 2986
BstACI GRCGYC 1 cut(s) 2519
BstAFI CTTAAG 2 cut(s) 1168, 2312
BstAUI TGTACA 1 cut(s) 2768
BstBI TTCGAA 1 cut(s) 1144
BstC8I GCNNGC 5 cut(s) 961, 1459, 2259, 2819, 2945
BstDSI CCRYGG 1 cut(s) 1419
BstENI CCTNNNNNAGG 2 cut(s) 1755, 1815
BstF5I GGATG 3 cut(s) 793, 1387, 2198
BstFNI CGCG 1 cut(s) 2257
BstH2I RGCGCY 2 cut(s) 982, 2522
BstHHI GCGC 4 cut(s) 213, 981, 2257, 2521
BstKTI GATC 9 cut(s) 45, 206, 276, 876, 919, 1548, 1713, 2212, 2319
BstMAI GTCTC 3 cut(s) 1439, 2379, 2651
BstMBI GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
BstMWI GCNNNNNNNGC 5 cut(s) 1098, 1649, 2308, 2607, 2616
BstNI CCWGG 4 cut(s) 294, 335, 2662, 2855
BstNSI RCATGY 2 cut(s) 1232, 2821
BstSCI CCNGG 6 cut(s) 292, 333, 434, 660, 2660, 2853
BstSFI CTRYAG 1 cut(s) 2672
BstUI CGCG 1 cut(s) 2257
BstV1I GCAGC 5 cut(s) 309, 503, 2006, 2107, 2394
BstX2I RGATCY 5 cut(s) 203, 873, 916, 1710, 2316
BstXI CCANNNNNNTGG 2 cut(s) 384, 506
BstYI RGATCY 5 cut(s) 203, 873, 916, 1710, 2316
BstZ17I GTATAC 1 cut(s) 1513
Bsu36I CCTNAGG 1 cut(s) 1752
BsuRI GGCC 5 cut(s) 722, 793, 1092, 2302, 2794
BtgI CCRYGG 1 cut(s) 1419
BtgZI GCGATG 1 cut(s) 1311
BtsCI GGATG 3 cut(s) 793, 1387, 2198
BtsI GCAGTG 4 cut(s) 138, 1082, 1201, 2844
BveI ACCTGC 3 cut(s) 929, 1017, 1634
Cac8I GCNNGC 5 cut(s) 961, 1459, 2259, 2819, 2945
CfoI GCGC 4 cut(s) 213, 981, 2257, 2521
Cfr13I GGNCC 9 cut(s) 725, 791, 891, 1091, 1769, 1900, 2045, 2270, 2902
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 6 cut(s) 369, 1069, 1560, 2227, 2233, 2769
CspCI CAANNNNNGTGG 4 cut(s) 5, 40, 1222, 1257
CviQI GTAC 6 cut(s) 369, 1069, 1560, 2227, 2233, 2769
DinI GGCGCC 1 cut(s) 2520
DpnI GATC 9 cut(s) 44, 205, 275, 875, 918, 1547, 1712, 2211, 2318
DpnII GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
DraI TTTAAA 1 cut(s) 1807
DrdI GACNNNNNNGTC 1 cut(s) 1256
DseDI GACNNNNNNGTC 1 cut(s) 1256
EaeI YGGCCR 2 cut(s) 720, 2300
Eam1104I CTCTTC 5 cut(s) 519, 1260, 1892, 2600, 2986
EarI CTCTTC 5 cut(s) 519, 1260, 1892, 2600, 2986
Eco130I CCWWGG 2 cut(s) 2506, 2586
Eco147I AGGCCT 1 cut(s) 2794
Eco24I GRGCYC 1 cut(s) 1103
Eco31I GGTCTC 1 cut(s) 1439
Eco32I GATATC 3 cut(s) 625, 1957, 2154
Eco47I GGWCC 7 cut(s) 725, 891, 1769, 1900, 2045, 2270, 2902
Eco57I CTGAAG 1 cut(s) 330
Eco81I CCTNAGG 1 cut(s) 1752
EcoNI CCTNNNNNAGG 2 cut(s) 1755, 1815
EcoO109I RGGNCCY 2 cut(s) 1091, 2902
EcoRII CCWGG 4 cut(s) 292, 333, 2660, 2853
EcoRV GATATC 3 cut(s) 625, 1957, 2154
EcoT14I CCWWGG 2 cut(s) 2506, 2586
EcoT22I ATGCAT 3 cut(s) 708, 1230, 2779
EcoT38I GRGCYC 1 cut(s) 1103
EgeI GGCGCC 1 cut(s) 2520
EheI GGCGCC 1 cut(s) 2520
ErhI CCWWGG 2 cut(s) 2506, 2586
FalI AAGNNNNNCTT 4 cut(s) 1151, 1183, 2727, 2759
FaqI GGGAC 4 cut(s) 75, 1750, 1755, 2915
FauI CCCGC 1 cut(s) 2594
FbaI TGATCA 1 cut(s) 273
FblI GTMKAC 1 cut(s) 1512
Fnu4HI GCNGC 5 cut(s) 323, 492, 1995, 2096, 2408
FokI GGATG 3 cut(s) 800, 1394, 2205
FriOI GRGCYC 1 cut(s) 1103
Fsp4HI GCNGC 5 cut(s) 323, 492, 1995, 2096, 2408
FspBI CTAG 7 cut(s) 1013, 2177, 2334, 2342, 2490, 2507, 2651
GlaI GCGC 4 cut(s) 212, 980, 2256, 2520
GluI GCNGC 5 cut(s) 323, 492, 1995, 2096, 2408
GsaI CCCAGC 1 cut(s) 606
GsuI CTGGAG 2 cut(s) 317, 849
HaeII RGCGCY 2 cut(s) 982, 2522
HaeIII GGCC 5 cut(s) 722, 793, 1092, 2302, 2794
HapII CCGG 4 cut(s) 435, 662, 723, 1028
HhaI GCGC 4 cut(s) 213, 981, 2257, 2521
Hin1I GRCGYC 1 cut(s) 2519
Hin6I GCGC 4 cut(s) 211, 979, 2255, 2519
HinP1I GCGC 4 cut(s) 211, 979, 2255, 2519
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HpaI GTTAAC 1 cut(s) 13
HpaII CCGG 4 cut(s) 435, 662, 723, 1028
HphI GGTGA 7 cut(s) 183, 946, 953, 1382, 1458, 2474, 2824
Hpy166II GTNNAC 9 cut(s) 13, 290, 716, 944, 1513, 1562, 2227, 2380, 2566
Hpy8I GTNNAC 9 cut(s) 13, 290, 716, 944, 1513, 1562, 2227, 2380, 2566
HpyAV CCTTC 9 cut(s) 442, 528, 1286, 1304, 1612, 2027, 2198, 2683, 2819
HpyCH4III ACNGT 8 cut(s) 857, 1024, 1223, 1258, 1519, 1769, 2570, 2636
HpyCH4IV ACGT 2 cut(s) 18, 1405
HpyF10VI GCNNNNNNNGC 5 cut(s) 1098, 1649, 2308, 2607, 2616
HpySE526I ACGT 2 cut(s) 18, 1405
Hsp92I GRCGYC 1 cut(s) 2519
HspAI GCGC 4 cut(s) 211, 979, 2255, 2519
KasI GGCGCC 1 cut(s) 2518
Ksp22I TGATCA 1 cut(s) 273
KspAI GTTAAC 1 cut(s) 13
Kzo9I GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
LguI GCTCTTC 2 cut(s) 2600, 2986
LmnI GCTCC 3 cut(s) 1154, 1868, 2692
Lsp1109I GCAGC 5 cut(s) 309, 503, 2006, 2107, 2394
LweI GCATC 4 cut(s) 88, 1433, 2290, 2786
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 7 cut(s) 1013, 2177, 2334, 2342, 2490, 2507, 2651
MaeII ACGT 2 cut(s) 18, 1405
MalI GATC 9 cut(s) 44, 205, 275, 875, 918, 1547, 1712, 2211, 2318
MboI GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
MfeI CAATTG 1 cut(s) 1234
MflI RGATCY 5 cut(s) 203, 873, 916, 1710, 2316
MhlI GDGCHC 2 cut(s) 1103, 1873
MlsI TGGCCA 1 cut(s) 2302
MluNI TGGCCA 1 cut(s) 2302
Mly113I GGCGCC 1 cut(s) 2519
MlyI GAGTC 2 cut(s) 197, 2361
MmeI TCCRAC 4 cut(s) 894, 1846, 2807, 2932
Mox20I TGGCCA 1 cut(s) 2302
Mph1103I ATGCAT 3 cut(s) 708, 1230, 2779
MroXI GAANNNNTTC 2 cut(s) 1622, 1916
MscI TGGCCA 1 cut(s) 2302
MslI CAYNNNNRTG 2 cut(s) 382, 711
Msp20I TGGCCA 1 cut(s) 2302
MspCI CTTAAG 2 cut(s) 1168, 2312
MspI CCGG 4 cut(s) 435, 662, 723, 1028
MspR9I CCNGG 6 cut(s) 294, 335, 436, 662, 2662, 2855
MunI CAATTG 1 cut(s) 1234
Mva1269I GAATGC 2 cut(s) 233, 706
MvaI CCWGG 4 cut(s) 294, 335, 2662, 2855
MvnI CGCG 1 cut(s) 2257
MwoI GCNNNNNNNGC 5 cut(s) 1098, 1649, 2308, 2607, 2616
NarI GGCGCC 1 cut(s) 2519
NciI CCSGG 2 cut(s) 436, 662
NdeII GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
NlaIV GGNNCC 6 cut(s) 81, 727, 1771, 2503, 2520, 2903
NmuCI GTSAC 6 cut(s) 189, 635, 779, 1370, 1690, 2540
NsiI ATGCAT 3 cut(s) 708, 1230, 2779
NspI RCATGY 2 cut(s) 1232, 2821
NspV TTCGAA 1 cut(s) 1144
PaeI GCATGC 1 cut(s) 2821
PaqCI CACCTGC 1 cut(s) 929
PceI AGGCCT 1 cut(s) 2794
PciSI GCTCTTC 2 cut(s) 2600, 2986
PctI GAATGC 2 cut(s) 233, 706
PdmI GAANNNNTTC 2 cut(s) 1622, 1916
PfoI TCCNGGA 2 cut(s) 333, 660
PkrI GCNGC 5 cut(s) 324, 493, 1996, 2097, 2409
PleI GAGTC 2 cut(s) 196, 2361
PluTI GGCGCC 1 cut(s) 2522
PpsI GAGTC 2 cut(s) 196, 2361
PpuMI RGGWCCY 1 cut(s) 2902
PshBI ATTAAT 1 cut(s) 269
Psp5II RGGWCCY 1 cut(s) 2902
Psp6I CCWGG 4 cut(s) 292, 333, 2660, 2853
PspFI CCCAGC 1 cut(s) 602
PspGI CCWGG 4 cut(s) 292, 333, 2660, 2853
PspN4I GGNNCC 6 cut(s) 81, 727, 1771, 2503, 2520, 2903
PspPI GGNCC 9 cut(s) 725, 791, 891, 1091, 1769, 1900, 2045, 2270, 2902
PspPPI RGGWCCY 1 cut(s) 2902
PsuI RGATCY 5 cut(s) 203, 873, 916, 1710, 2316
RsaI GTAC 6 cut(s) 370, 1070, 1561, 2228, 2234, 2770
RsaNI GTAC 6 cut(s) 369, 1069, 1560, 2227, 2233, 2769
RseI CAYNNNNRTG 2 cut(s) 382, 711
SapI GCTCTTC 2 cut(s) 2600, 2986
SatI GCNGC 5 cut(s) 323, 492, 1995, 2096, 2408
Sau3AI GATC 9 cut(s) 42, 203, 273, 873, 916, 1545, 1710, 2209, 2316
Sau96I GGNCC 9 cut(s) 725, 791, 891, 1091, 1769, 1900, 2045, 2270, 2902
SchI GAGTC 2 cut(s) 197, 2361
ScrFI CCNGG 6 cut(s) 294, 335, 436, 662, 2662, 2855
SduI GDGCHC 2 cut(s) 1103, 1873
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 4 cut(s) 88, 1433, 2290, 2786
SfcI CTRYAG 1 cut(s) 2672
SfoI GGCGCC 1 cut(s) 2520
SfuI TTCGAA 1 cut(s) 1144
SinI GGWCC 7 cut(s) 725, 891, 1769, 1900, 2045, 2270, 2902
SmiMI CAYNNNNRTG 2 cut(s) 382, 711
SmlI CTYRAG 8 cut(s) 84, 481, 769, 1168, 2312, 2369, 2896, 3004
SmoI CTYRAG 8 cut(s) 84, 481, 769, 1168, 2312, 2369, 2896, 3004
SphI GCATGC 1 cut(s) 2821
SseBI AGGCCT 1 cut(s) 2794
SsiI CCGC 5 cut(s) 957, 1535, 1579, 1898, 2601
SspDI GGCGCC 1 cut(s) 2518
SspI AATATT 4 cut(s) 551, 742, 1328, 1630
SspMI CTAG 7 cut(s) 1013, 2177, 2334, 2342, 2490, 2507, 2651
StuI AGGCCT 1 cut(s) 2794
StyD4I CCNGG 6 cut(s) 292, 333, 434, 660, 2660, 2853
StyI CCWWGG 2 cut(s) 2506, 2586
TaaI ACNGT 8 cut(s) 857, 1024, 1223, 1258, 1519, 1769, 2570, 2636
TaiI ACGT 2 cut(s) 21, 1408
TaqI TCGA 3 cut(s) 571, 1144, 1190
TatI WGTACW 2 cut(s) 2232, 2768
TseFI GTSAC 6 cut(s) 189, 635, 779, 1370, 1690, 2540
TseI GCWGC 5 cut(s) 322, 491, 1994, 2095, 2407
Tsp45I GTSAC 6 cut(s) 189, 635, 779, 1370, 1690, 2540
TspDTI ATGAA 9 cut(s) 19, 410, 911, 939, 1305, 1366, 1879, 2370, 2733
TspGWI ACGGA 2 cut(s) 617, 1408
Vha464I CTTAAG 2 cut(s) 1168, 2312
VpaK11BI GGWCC 7 cut(s) 725, 891, 1769, 1900, 2045, 2270, 2902
VspI ATTAAT 1 cut(s) 269
XagI CCTNNNNNAGG 2 cut(s) 1755, 1815
XapI RAATTY 6 cut(s) 441, 803, 986, 1195, 1969, 2953
XceI RCATGY 2 cut(s) 1232, 2821
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XmaJI CCTAGG 1 cut(s) 2506
XmiI GTMKAC 1 cut(s) 1512
XmnI GAANNNNTTC 2 cut(s) 1622, 1916
XspI CTAG 7 cut(s) 1013, 2177, 2334, 2342, 2490, 2507, 2651
Zsp2I ATGCAT 3 cut(s) 708, 1230, 2779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.