MD00G1006800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
965925 .. 973510
7586 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1006800.v1.1.491

Sequence Viewer

Length: 2907 bp
ATGTTACCCCAGCAGGAAGTTTATGCTCTCCGAGAAATTGCTACCACGATGGGTGCAAAATATTGGACTTTTAACGCTGGTACTTGCCGAATTGAAACGGTGGGTCTAACAGAGAAGCAACCAAAGGGATCCGAAGGAAATACTGAATGTGATTGCAACTTTGAGAACGGCACTGTTTGTCATATTGCAACGCTAACGCTCATGGGTTATAGTTTACCTGGGTTGCTGCCACCTCAACTCGTCAAGCTTCCTTACCTTCGAAAAATTGATTTTTCTTACAACTATCTCAGTGGTACAATACCAAAGGAATGGGCTTCAATGAAACTAAATTATTTCTCTGTGCTTGTCAATCGGTTATCGGGGGAAATCCCAAAGGAGTTGGGAAATATTACCACTCTGACAGACCTGAACCTTGAGGCGAACCAATTTTCTGGTAGTCTTCCTACTGAGCTTGGGAATTTGGTTAATTTGCAGACTTTGATGCTTTCCTCCAATCAGCTGACTGGATACTTGCCAGAGACATTTTCTGGGCTAAGGATTCTAACAGATTTCCGAATAAGCGATAACAACTTTAGTGGAACACTGCCCGGCTGGGTGCAGAATTGGAAAAACCTCACAAGATTAGAAATGCATTCAAGTGGACTGGAAGGACCGATTCCATCAAATATTTCACTTTTGAACAATTTGAAAGAGTTGAGGATTAGTGACACAAATGGACCAAATCAGGAATTTCCTTTGCTGAGAAATATGACAAGCCTAGTAAGATTGGTTTTGAGGAACTGCAATATTGCCGGAGAGATCCCCGCATATGTCTGGTCCTTGAAGAATCTGGAGATGTTGGATGTCAGTTTCAACAAGTTAACAGGCGAACTTCCATCCACGATAGGAGCTGAGCGTCTAAAATTTGTCTTTTTGACTGGCAACCTGCTAAGTGGAAACGTGCCAAGGTCAATCTTGCGAGATGGAAGTAAAGTTGATTTGTCGTACAATAACTTCACATTTCAAGGCCCTGAGAAACTGGATTGTAAAAAAAACTTGAATCTAAGTCTAAACTTGTATCGGAGCTCTTCAGAGGAGAACAACTTGAGGGGAATTCTTCCATGCTTGAAGAATTTTAAGTGCCCACGATATTCAAACTGTATGCATGTCAACTGTGGCGGAAACGATATAATTGTCAATGACGAGAATCACACAAATGTCCAGTTTGAAAAAGATGGGGGAGTTGAAGGTGGCAGTGCTAAATATTTTTGGAATGAGAAAAGTATGTGGGGATTTAGTAGCACCGGTGACTTCATGGATGACTTCGAGCTGCAAAATACACGCTACTTTGTATCTCTGGCATCTTCCAATCTTTCTGAGCTATATACAACAGCACGCATATCTCCGCTTTCACTTACTTATTTCCACCGTTGTTTAGAAAATGGGATTTACACTATAACTCTCCACTTTGCGGAGATCGAATTCACGAATGACAAAAGGTATACTAGTCTTGGGAGGCGTATTTTCGATATCTATGTTCAGGAAAGGTTGGTGTGGAAGGATTTCAATATTGAACACGAGGTTGGCATGGCTCAAAAGAGATTAGTTAAGCAAGTAGATAATGTCAATGTGACAAGTAACGTCTTAGATATCCGGTTCTACTGGGCTGGAAAAGGGACAACGAAGATTCCAGAGAAAGGACACTATGGTCCCCTCATATCTGCTGTCTCTGTGGTTTCCATCTTTAAACCGTGTACAAATGGTGGAACTGTGCGAACCATTTACATCATTGCCGGTGTTGTTGGGGGATGCCTAACACTATTCGTACTGGCAATCCTTTGGTGGAAAGGATGTTTGGGAGGAAAAAGGGGGAGACAACAAGATCTTGGACAAGATATGCAGACGAGGACTTTTACTTTGAAACAAATAAAAGCTGCCACTAACAACTTTGATTCTGCAAGAAAGATTGGAGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCACTTACCTAACGGTTCATTGATAGCAGTTAAGCAGCTCTCATCCAATTCAAAGCAAGGAAATCGCGAATTTTTAAATGAGATTGGCATGATAACTTGTTTGCAACACCCGAATCTAGTGACACTGCATGGATGCTGTATTGAAAGGGATCAATTATTACTGGTTTACGAATACATGGAAAACAATAGTCTTGCGCATGCCTTATTCGGCCCGGAGAACCAAGTTAAACTGGACTGGCCTACACGGCTTAAGATTTGTACCGGTATAGCCAGAGGTTTAGCTTTTCTGCATGAAGAATCAAGACTCAAGATTGTTCACAGGGACATAAAAGCTACCAATGTGCTGCTGGATGGGGATTTGAACCCTAAAATATCGGACTTTGGATTGGCTAAACTTTATGGTGAAGAGAGCACACATGTCAGCACCAAAGTTGCAGGAACCATAGGATATATGGCACCAGAATATGCTCTATGGGGTCACTTGACCTACATGGCAGATGTTTACAGTTTCGGAGTTGTTGCGTTGGAGATTGCCAGTGGGAAGAAGAACAGTTATGTACCAAGTAACACTTGTGTCTGTCTCCTAGACTGGGCCTATCAGTTGCAACAAAGTGGAAACTTGAAGGAGCTGATAGATGTGAGCTTAGGGAGTGAAGTCAATTACAAAGAAGCAGAAGTACTGATTAAAGTCGGTTTGCTGTGCACGAATGTTTCTCCGTCACTTAGGCCTACCATGTCCGAGGTGGTGAGCATGCTTGAAGGACGAACAACAGTCCCGGACACAAAGCAAGAAGCGATAAATTATACTGAAGATTGGAGGCTCAAGGCCGTGAAAGATCGACATCATCAAAGCCAAACACAAAGTTCAAGTGGAAGCCAACACGAGAGTTTGGTAACTTCTTACACATTTTACTCTTCCTCTACATGA

Protein Analysis

969

Amino Acids

108.19

Weight (kDa)

7.01

Isoelectric Point (pI)

35.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 125 - 234 4.8e-10 Leucine-rich repeat region
LRR_8 PF13855 132 - 191 8.8e-07 Leucine rich repeat
Malectin PF11721 380 - 569 3.3e-39 Malectin domain
Pkinase PF00069 644 - 910 8.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 646 - 912 5.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1686
Acc16I TGCGCA 1 cut(s) 2175
Acc36I ACCTGC 1 cut(s) 933
AccB1I GGYRCC 1 cut(s) 2434
AccI GTMKAC 2 cut(s) 1481, 1971
AccII CGCG 1 cut(s) 2046
AciI CCGC 4 cut(s) 804, 1158, 1385, 1451
AclWI GGATC 4 cut(s) 123, 136, 793, 2136
AcsI RAATTY 7 cut(s) 457, 728, 902, 1092, 1111, 1460, 2048
AcuI CTGAAG 2 cut(s) 1053, 2808
AfaI GTAC 8 cut(s) 82, 295, 986, 1735, 1806, 2239, 2538, 2658
AfiI CCNNNNNNNGG 3 cut(s) 1450, 1676, 2569
AflII CTTAAG 1 cut(s) 2228
AflIII ACRYGT 1 cut(s) 2395
AgeI ACCGGT 2 cut(s) 1283, 2240
AhlI ACTAGT 1 cut(s) 1484
AjnI CCWGG 1 cut(s) 217
AjuI GAANNNNNNNTTGG 6 cut(s) 1545, 1577, 1817, 1849, 1944, 1976
Alw21I GWGCWC 3 cut(s) 1067, 2393, 2684
Alw26I GTCTC 4 cut(s) 512, 1711, 1846, 2564
Alw44I GTGCAC 1 cut(s) 2680
AlwI GGATC 4 cut(s) 123, 136, 793, 2136
AoxI GGCC 6 cut(s) 1006, 2188, 2216, 2571, 2705, 2805
ApaLI GTGCAC 1 cut(s) 2680
ApeKI GCWGC 5 cut(s) 226, 1309, 1913, 2014, 2323
ApoI RAATTY 7 cut(s) 457, 728, 902, 1092, 1111, 1460, 2048
ArsI GACNNNNNNTTYG 2 cut(s) 1879, 1911
AsiGI ACCGGT 2 cut(s) 1283, 2240
Asp700I GAANNNNTTC 1 cut(s) 1541
AspLEI GCGC 1 cut(s) 2176
AspS9I GGNCC 8 cut(s) 650, 716, 816, 1007, 1688, 1964, 2189, 2571
AsuC2I CCSGG 3 cut(s) 588, 2192, 2756
AsuHPI GGTGA 3 cut(s) 1298, 2393, 2737
AsuII TTCGAA 1 cut(s) 259
AvaII GGWCC 5 cut(s) 650, 716, 816, 1688, 1964
BaeGI GKGCMC 2 cut(s) 1124, 2684
BamHI GGATCC 1 cut(s) 128
BanI GGYRCC 1 cut(s) 2434
BanII GRGCYC 1 cut(s) 1067
BarI GAAGNNNNNNTAC 4 cut(s) 977, 1009, 2640, 2672
BauI CACGAG 2 cut(s) 1556, 2861
BbsI GAAGAC 1 cut(s) 431
Bbv12I GWGCWC 3 cut(s) 1067, 2393, 2684
BbvI GCAGC 5 cut(s) 213, 1296, 1900, 2026, 2310
BccI CCATC 7 cut(s) 43, 667, 883, 956, 1208, 1727, 2324
BceAI ACGGC 3 cut(s) 184, 2240, 2792
BcgI CGANNNNNNTGC 2 cut(s) 2024, 2058
BciT130I CCWGG 1 cut(s) 219
BciVI GTATCC 1 cut(s) 500
BcnI CCSGG 3 cut(s) 588, 2192, 2756
BcoDI GTCTC 4 cut(s) 512, 1711, 1846, 2564
BcuI ACTAGT 1 cut(s) 1484
BfaI CTAG 4 cut(s) 758, 1485, 2096, 2564
BfrI CTTAAG 1 cut(s) 2228
BfuAI ACCTGC 1 cut(s) 933
BfuI GTATCC 1 cut(s) 500
BglI GCCNNNNNGGC 1 cut(s) 2224
BglII AGATCT 1 cut(s) 1861
BisI GCNGC 5 cut(s) 227, 1310, 1914, 2015, 2324
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 5 cut(s) 228, 1311, 1915, 2016, 2325
BmcAI AGTACT 1 cut(s) 2658
Bme1390I CCNGG 4 cut(s) 219, 588, 2192, 2756
Bme18I GGWCC 5 cut(s) 650, 716, 816, 1688, 1964
BmgT120I GGNCC 8 cut(s) 650, 716, 816, 1007, 1688, 1964, 2189, 2571
BmiI GGNNCC 4 cut(s) 130, 1690, 2419, 2436
BmrFI CCNGG 4 cut(s) 219, 588, 2192, 2756
BmrI ACTGGG 2 cut(s) 1651, 2578
BmsI GCATC 4 cut(s) 471, 1349, 1778, 2102
BmuI ACTGGG 2 cut(s) 1651, 2578
BpiI GAAGAC 1 cut(s) 431
BpmI CTGGAG 1 cut(s) 851
Bpu10I CCTNAGC 2 cut(s) 533, 2623
Bpu1102I GCTNAGC 1 cut(s) 891
Bpu14I TTCGAA 1 cut(s) 259
BpuEI CTTGAG 4 cut(s) 434, 1105, 2270, 2786
BpuMI CCSGG 3 cut(s) 588, 2192, 2756
BsaBI GATNNNNATC 1 cut(s) 2820
BsaJI CCNNGG 3 cut(s) 218, 944, 2718
BsaWI WCCGGW 3 cut(s) 1283, 1632, 2240
Bsc4I CCNNNNNNNGG 3 cut(s) 1450, 1676, 2569
Bse118I RCCGGY 3 cut(s) 1283, 1772, 2240
Bse3DI GCAATG 1 cut(s) 1767
Bse8I GATNNNNATC 1 cut(s) 2820
BseBI CCWGG 1 cut(s) 219
BseDI CCNNGG 3 cut(s) 218, 944, 2718
BseGI GGATG 8 cut(s) 847, 875, 1303, 1793, 1835, 2021, 2117, 2335
BseJI GATNNNNATC 1 cut(s) 2820
BseLI CCNNNNNNNGG 3 cut(s) 1450, 1676, 2569
BseMI GCAATG 1 cut(s) 1767
BseMII CTCAG 6 cut(s) 301, 438, 731, 882, 1002, 1347
BseRI GAGGAG 1 cut(s) 1088
BseSI GKGCMC 2 cut(s) 1124, 2684
BseXI GCAGC 5 cut(s) 213, 1296, 1900, 2026, 2310
BseYI CCCAGC 2 cut(s) 9, 591
BsgI GTGCAG 1 cut(s) 617
Bsh1236I CGCG 1 cut(s) 2046
BshFI GGCC 6 cut(s) 1008, 2190, 2218, 2573, 2707, 2807
BshNI GGYRCC 1 cut(s) 2434
BshTI ACCGGT 2 cut(s) 1283, 2240
BsiHKAI GWGCWC 3 cut(s) 1067, 2393, 2684
BsiSI CCGG 8 cut(s) 588, 792, 1284, 1633, 1773, 2192, 2241, 2756
BslFI GGGAC 4 cut(s) 1669, 1674, 2315, 2738
BslI CCNNNNNNNGG 3 cut(s) 1450, 1676, 2569
BsmAI GTCTC 4 cut(s) 512, 1711, 1846, 2564
BsmFI GGGAC 4 cut(s) 1669, 1674, 2315, 2738
BsmI GAATGC 1 cut(s) 631
BsnI GGCC 6 cut(s) 1008, 2190, 2218, 2573, 2707, 2807
Bsp119I TTCGAA 1 cut(s) 259
Bsp1286I GDGCHC 4 cut(s) 1067, 1124, 2393, 2684
Bsp1407I TGTACA 1 cut(s) 1733
Bsp143I GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
Bsp1720I GCTNAGC 1 cut(s) 891
Bsp68I TCGCGA 1 cut(s) 2046
BspACI CCGC 4 cut(s) 804, 1158, 1385, 1451
BspANI GGCC 6 cut(s) 1008, 2190, 2218, 2573, 2707, 2807
BspCNI CTCAG 6 cut(s) 300, 439, 732, 883, 1003, 1348
BspFNI CGCG 1 cut(s) 2046
BspLI GGNNCC 4 cut(s) 130, 1690, 2419, 2436
BspMI ACCTGC 1 cut(s) 933
BspPI GGATC 4 cut(s) 123, 136, 793, 2136
BspQI GCTCTTC 1 cut(s) 1072
BspT104I TTCGAA 1 cut(s) 259
BspT107I GGYRCC 1 cut(s) 2434
BspTI CTTAAG 1 cut(s) 2228
BsrDI GCAATG 1 cut(s) 1767
BsrFI RCCGGY 3 cut(s) 1283, 1772, 2240
BsrGI TGTACA 1 cut(s) 1733
BssAI RCCGGY 3 cut(s) 1283, 1772, 2240
BssECI CCNNGG 3 cut(s) 218, 944, 2718
BssMI GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
BssNAI GTATAC 1 cut(s) 1482
BssSI CACGAG 2 cut(s) 1556, 2861
BssT1I CCWWGG 1 cut(s) 944
Bst1107I GTATAC 1 cut(s) 1482
Bst2BI CACGAG 2 cut(s) 1556, 2861
Bst2UI CCWGG 1 cut(s) 219
Bst6I CTCTTC 3 cut(s) 1072, 2379, 2899
BstAFI CTTAAG 1 cut(s) 2228
BstAUI TGTACA 1 cut(s) 1733
BstBI TTCGAA 1 cut(s) 259
BstC8I GCNNGC 3 cut(s) 1375, 2178, 2732
BstF5I GGATG 8 cut(s) 847, 875, 1303, 1793, 1835, 2021, 2117, 2335
BstFNI CGCG 1 cut(s) 2046
BstHHI GCGC 1 cut(s) 2176
BstKTI GATC 6 cut(s) 131, 801, 1458, 1864, 2131, 2818
BstMAI GTCTC 4 cut(s) 512, 1711, 1846, 2564
BstMBI GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
BstMWI GCNNNNNNNGC 1 cut(s) 2224
BstNI CCWGG 1 cut(s) 219
BstNSI RCATGY 4 cut(s) 1148, 2180, 2399, 2734
BstSCI CCNGG 4 cut(s) 217, 586, 2190, 2754
BstSLI GKGCMC 2 cut(s) 1124, 2684
BstUI CGCG 1 cut(s) 2046
BstV1I GCAGC 5 cut(s) 213, 1296, 1900, 2026, 2310
BstV2I GAAGAC 1 cut(s) 431
BstX2I RGATCY 3 cut(s) 128, 798, 1861
BstXI CCANNNNNNTGG 2 cut(s) 309, 431
BstYI RGATCY 3 cut(s) 128, 798, 1861
BstZ17I GTATAC 1 cut(s) 1482
BsuI GTATCC 1 cut(s) 500
BsuRI GGCC 6 cut(s) 1008, 2190, 2218, 2573, 2707, 2807
BtsCI GGATG 8 cut(s) 847, 875, 1303, 1793, 1835, 2021, 2117, 2335
BtsI GCAGTG 3 cut(s) 581, 1240, 2102
BtsIMutI CAGTG 6 cut(s) 171, 295, 581, 1240, 2102, 2521
BtuMI TCGCGA 1 cut(s) 2046
BveI ACCTGC 1 cut(s) 933
Cac8I GCNNGC 3 cut(s) 1375, 2178, 2732
CfoI GCGC 1 cut(s) 2176
Cfr10I RCCGGY 3 cut(s) 1283, 1772, 2240
Cfr13I GGNCC 8 cut(s) 650, 716, 816, 1007, 1688, 1964, 2189, 2571
CseI GACGC 1 cut(s) 884
Csp6I GTAC 8 cut(s) 81, 294, 985, 1734, 1805, 2238, 2537, 2657
CspAI ACCGGT 2 cut(s) 1283, 2240
CspCI CAANNNNNGTGG 2 cut(s) 556, 591
CviQI GTAC 8 cut(s) 81, 294, 985, 1734, 1805, 2238, 2537, 2657
DpnI GATC 6 cut(s) 130, 800, 1457, 1863, 2130, 2817
DpnII GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
DraI TTTAAA 2 cut(s) 1726, 2055
DrdI GACNNNNNNGTC 1 cut(s) 1686
DseDI GACNNNNNNGTC 1 cut(s) 1686
Eam1104I CTCTTC 3 cut(s) 1072, 2379, 2899
EarI CTCTTC 3 cut(s) 1072, 2379, 2899
EciI GGCGGA 1 cut(s) 1173
Ecl136II GAGCTC 1 cut(s) 1065
Eco130I CCWWGG 1 cut(s) 944
Eco147I AGGCCT 1 cut(s) 2707
Eco24I GRGCYC 1 cut(s) 1067
Eco32I GATATC 2 cut(s) 1510, 1630
Eco47I GGWCC 5 cut(s) 650, 716, 816, 1688, 1964
Eco53kI GAGCTC 1 cut(s) 1065
Eco57I CTGAAG 2 cut(s) 1053, 2808
EcoICRI GAGCTC 1 cut(s) 1065
EcoO109I RGGNCCY 1 cut(s) 1007
EcoRI GAATTC 2 cut(s) 1092, 1460
EcoRII CCWGG 1 cut(s) 217
EcoRV GATATC 2 cut(s) 1510, 1630
EcoT14I CCWWGG 1 cut(s) 944
EcoT22I ATGCAT 2 cut(s) 633, 1146
EcoT38I GRGCYC 1 cut(s) 1067
ErhI CCWWGG 1 cut(s) 944
FalI AAGNNNNNCTT 4 cut(s) 1967, 1999, 2533, 2565
FaqI GGGAC 4 cut(s) 1669, 1674, 2315, 2738
FauI CCCGC 1 cut(s) 811
FauNDI CATATG 1 cut(s) 808
FblI GTMKAC 2 cut(s) 1481, 1971
Fnu4HI GCNGC 5 cut(s) 227, 1310, 1914, 2015, 2324
FokI GGATG 8 cut(s) 854, 862, 1310, 1800, 1842, 2008, 2124, 2342
FriOI GRGCYC 1 cut(s) 1067
Fsp4HI GCNGC 5 cut(s) 227, 1310, 1914, 2015, 2324
FspBI CTAG 4 cut(s) 758, 1485, 2096, 2564
FspI TGCGCA 1 cut(s) 2175
GlaI GCGC 1 cut(s) 2175
GluI GCNGC 5 cut(s) 227, 1310, 1914, 2015, 2324
GsaI CCCAGC 2 cut(s) 13, 595
GsuI CTGGAG 1 cut(s) 851
HaeIII GGCC 6 cut(s) 1008, 2190, 2218, 2573, 2707, 2807
HapII CCGG 8 cut(s) 588, 792, 1284, 1633, 1773, 2192, 2241, 2756
HgaI GACGC 1 cut(s) 884
HhaI GCGC 1 cut(s) 2176
Hin6I GCGC 1 cut(s) 2174
HinP1I GCGC 1 cut(s) 2174
HincII GTYRAC 2 cut(s) 861, 1150
HindII GTYRAC 2 cut(s) 861, 1150
HindIII AAGCTT 1 cut(s) 245
HpaI GTTAAC 1 cut(s) 861
HpaII CCGG 8 cut(s) 588, 792, 1284, 1633, 1773, 2192, 2241, 2756
HphI GGTGA 3 cut(s) 1298, 2393, 2737
Hpy188III TCNNGA 8 cut(s) 725, 830, 1465, 1520, 1670, 2045, 2280, 2287
HpyAV CCTTC 8 cut(s) 128, 266, 641, 1220, 1531, 1946, 2596, 2732
HpyCH4IV ACGT 2 cut(s) 939, 1620
HpyF10VI GCNNNNNNNGC 1 cut(s) 2224
HpySE526I ACGT 2 cut(s) 939, 1620
HspAI GCGC 1 cut(s) 2174
KspAI GTTAAC 1 cut(s) 861
Kzo9I GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
LguI GCTCTTC 1 cut(s) 1072
LmnI GCTCC 3 cut(s) 887, 1062, 2605
Lsp1109I GCAGC 5 cut(s) 213, 1296, 1900, 2026, 2310
LweI GCATC 4 cut(s) 471, 1349, 1778, 2102
MaeI CTAG 4 cut(s) 758, 1485, 2096, 2564
MaeII ACGT 2 cut(s) 939, 1620
MalI GATC 6 cut(s) 130, 800, 1457, 1863, 2130, 2817
MboI GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
MflI RGATCY 3 cut(s) 128, 798, 1861
MhlI GDGCHC 4 cut(s) 1067, 1124, 2393, 2684
MlyI GAGTC 1 cut(s) 2277
MmeI TCCRAC 2 cut(s) 819, 2484
Mph1103I ATGCAT 2 cut(s) 633, 1146
MroXI GAANNNNTTC 1 cut(s) 1541
MslI CAYNNNNRTG 2 cut(s) 636, 1194
MspA1I CMGCKG 1 cut(s) 499
MspCI CTTAAG 1 cut(s) 2228
MspI CCGG 8 cut(s) 588, 792, 1284, 1633, 1773, 2192, 2241, 2756
MspR9I CCNGG 4 cut(s) 219, 588, 2192, 2756
Mva1269I GAATGC 1 cut(s) 631
MvaI CCWGG 1 cut(s) 219
MvnI CGCG 1 cut(s) 2046
MwoI GCNNNNNNNGC 1 cut(s) 2224
NciI CCSGG 3 cut(s) 588, 2192, 2756
NdeI CATATG 1 cut(s) 808
NdeII GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
NlaIV GGNNCC 4 cut(s) 130, 1690, 2419, 2436
NmuCI GTSAC 7 cut(s) 704, 1286, 1609, 1979, 2098, 2456, 2697
NruI TCGCGA 1 cut(s) 2046
NsbI TGCGCA 1 cut(s) 2175
NsiI ATGCAT 2 cut(s) 633, 1146
NspI RCATGY 4 cut(s) 1148, 2180, 2399, 2734
NspV TTCGAA 1 cut(s) 259
PaeI GCATGC 2 cut(s) 2180, 2734
PceI AGGCCT 1 cut(s) 2707
PciI ACATGT 1 cut(s) 2395
PciSI GCTCTTC 1 cut(s) 1072
PctI GAATGC 1 cut(s) 631
PdmI GAANNNNTTC 1 cut(s) 1541
PfeI GAWTC 9 cut(s) 538, 655, 826, 1039, 1186, 1666, 1931, 2092, 2276
PfoI TCCNGGA 1 cut(s) 2754
PinAI ACCGGT 2 cut(s) 1283, 2240
PkrI GCNGC 5 cut(s) 228, 1311, 1915, 2016, 2325
PleI GAGTC 1 cut(s) 2277
PpsI GAGTC 1 cut(s) 2277
PscI ACATGT 1 cut(s) 2395
Psp124BI GAGCTC 1 cut(s) 1067
Psp6I CCWGG 1 cut(s) 217
PspFI CCCAGC 2 cut(s) 9, 591
PspGI CCWGG 1 cut(s) 217
PspN4I GGNNCC 4 cut(s) 130, 1690, 2419, 2436
PspPI GGNCC 8 cut(s) 650, 716, 816, 1007, 1688, 1964, 2189, 2571
PsuI RGATCY 3 cut(s) 128, 798, 1861
PvuII CAGCTG 1 cut(s) 499
RruI TCGCGA 1 cut(s) 2046
RsaI GTAC 8 cut(s) 82, 295, 986, 1735, 1806, 2239, 2538, 2658
RsaNI GTAC 8 cut(s) 81, 294, 985, 1734, 1805, 2238, 2537, 2657
RseI CAYNNNNRTG 2 cut(s) 636, 1194
SacI GAGCTC 1 cut(s) 1067
SapI GCTCTTC 1 cut(s) 1072
SatI GCNGC 5 cut(s) 227, 1310, 1914, 2015, 2324
Sau3AI GATC 6 cut(s) 128, 798, 1455, 1861, 2128, 2815
Sau96I GGNCC 8 cut(s) 650, 716, 816, 1007, 1688, 1964, 2189, 2571
ScaI AGTACT 1 cut(s) 2658
SchI GAGTC 1 cut(s) 2277
ScrFI CCNGG 4 cut(s) 219, 588, 2192, 2756
SduI GDGCHC 4 cut(s) 1067, 1124, 2393, 2684
SfaNI GCATC 4 cut(s) 471, 1349, 1778, 2102
SfuI TTCGAA 1 cut(s) 259
SgrAI CRCCGGYG 1 cut(s) 1283
SinI GGWCC 5 cut(s) 650, 716, 816, 1688, 1964
SmiMI CAYNNNNRTG 2 cut(s) 636, 1194
SmlI CTYRAG 5 cut(s) 413, 1084, 2228, 2285, 2801
SmoI CTYRAG 5 cut(s) 413, 1084, 2228, 2285, 2801
SpeI ACTAGT 1 cut(s) 1484
SphI GCATGC 2 cut(s) 2180, 2734
SseBI AGGCCT 1 cut(s) 2707
SsiI CCGC 4 cut(s) 804, 1158, 1385, 1451
SspI AATATT 6 cut(s) 62, 388, 667, 787, 1244, 1549
SspMI CTAG 4 cut(s) 758, 1485, 2096, 2564
SstI GAGCTC 1 cut(s) 1067
StuI AGGCCT 1 cut(s) 2707
StyD4I CCNGG 4 cut(s) 217, 586, 2190, 2754
StyI CCWWGG 1 cut(s) 944
TaiI ACGT 2 cut(s) 942, 1623
TaqI TCGA 5 cut(s) 259, 1305, 1458, 1506, 2818
TaqII GACCGA 1 cut(s) 667
TatI WGTACW 2 cut(s) 1733, 2656
TfiI GAWTC 9 cut(s) 538, 655, 826, 1039, 1186, 1666, 1931, 2092, 2276
TscAI CASTG 6 cut(s) 178, 295, 588, 1240, 2109, 2521
TseFI GTSAC 7 cut(s) 704, 1286, 1609, 1979, 2098, 2456, 2697
TseI GCWGC 5 cut(s) 226, 1309, 1913, 2014, 2323
Tsp45I GTSAC 7 cut(s) 704, 1286, 1609, 1979, 2098, 2456, 2697
TspDTI ATGAA 4 cut(s) 335, 1282, 1986, 2286
TspGWI ACGGA 1 cut(s) 2685
TspRI CASTG 6 cut(s) 178, 295, 588, 1240, 2109, 2521
Vha464I CTTAAG 1 cut(s) 2228
VneI GTGCAC 1 cut(s) 2680
VpaK11BI GGWCC 5 cut(s) 650, 716, 816, 1688, 1964
XapI RAATTY 7 cut(s) 457, 728, 902, 1092, 1111, 1460, 2048
XceI RCATGY 4 cut(s) 1148, 2180, 2399, 2734
XcmI CCANNNNNNNNNTGG 3 cut(s) 2323, 2428, 2719
XmiI GTMKAC 2 cut(s) 1481, 1971
XmnI GAANNNNTTC 1 cut(s) 1541
XspI CTAG 4 cut(s) 758, 1485, 2096, 2564
ZrmI AGTACT 1 cut(s) 2658
Zsp2I ATGCAT 2 cut(s) 633, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.