Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001237

Physical Location & Seq

Genomic Coordinates Reverse (-)

28205720 .. 28211228

Gene Structure 5509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g27170.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGAGTATCACTTCATTTTCTTTTTCTTCCTCTTTGTGTAGTGATTTTGCTCTCAATTATCTAAATGGTACTATACCAAAAGAATGGGGTGCAGTGCAGTTAACTTCAATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAGATTCCGAAGGAGTTGGGAAATATTACTACTCTTACATCCCTGATTCTTGAAGCAAATCAATTCTCCGGAGTTGTTCCCCATGAGCTTGGAAGTTTAATCAACTTGGGAACTATGATATTGTCCTCCAATCGTTTCACTGGAAACTTACCGATGACATTTTCTGGGCTAAGAAATTTGACAGACTTTAGAATAAACGATAACAACTTCAATGGAACAATACCTGATTTTATACAGAATTGGAAACAACTCAAAAGATTAGAAATGCATGCGAGTGGGCTTCAGGGACCCATCCCTTCCAACATATCTCTTTTGATCAACTTAACAGAGTTGAGGATTAGCGATATAAATGGAACAGAGCAGGGTTTTCCAGTATTACAAAACACAACAGGCCTAGAAAGATTGGTTCTGAGAAACTGTAACATTTCTGGAGAGATTCCTCCATACGTCTGGACAATGCAAAACCTGGACATGTTGGATGTCAGTTTTAACAAGTTAGTAGGGCAAATTCCAGCTACATTGAACTTAGAGAGTTTGAGATTCCTATTTTTAACTGGCAACTCTATGAGTGGGAGTGTACCAGACTCAGTGCTCAAGGATGGAAGTAGCATTGATCTTTCGTACAATAACTTCACATGGCAAGGCCCCGAGAAACCTGCTTGTCAAGACAACATCAATCTAAACCTGAACTTGTTCCGGAGCTCTTCAACAGAAAACAACTTAAGGAGAGGTCTTCCATGCTTGAAGAATCTCAACTGTCCACGATTTTCAACTTGTTTGCATGTTAATTGTGGTGGAAATGACTTCACTGTCGAAGGAAACAAAGGAAACATTTTGTATGAAGGAGACGGAGGAGTTGAAGGTGGCACTGCAGATTTTTTTTTAAATGATGCTTCTTATTGGGGATTTAGTAGCACTGGAGACTTCATGGATGACAACGATATCCAGAATACACGCTACTCTGTATCTCTGGCATCTTCCAATCTCTCTGGATTATACACAACAGCACGCATATCTCCACTTTCAATCACTTATTTCCATTATTGCTTAGAAAATGGTGACTATACCGTAACTCTTTACTTTGCGGAGATACAGTTTACAAATGACCAAACATATACGAGTCTTGGAAGGCGCATTTTTGATATCTATGTTCAGGATGAAGTATTGCGGAAGGATTTCAATATTGAAGATGAGTCAAAGGTGGCTCAAAAGCCTGTAGTAATACAAGAACACAATGTCAGTGTGACGAATAATATCTTAGAGATCCGATTCTATTTTGCTGGTAAAGGTACAACAAGGATTCCTGAAAGAGGAGTATATGGTCCCCTTATCTCTGCTATTGCCGTGGAATCTGATTCCAGAGATTGCTCAAATGGTGGAAAAAAAGGGACTGCTCACATTGTCACTGGAGTCGTAGTAGGAGCATTTCTCCTAGTATTCGTGATATTAGGGATCCTTTGGTGGAAAGGGTACTTGCCTTGCAAAAGGGGAAGTAATAAAGATAGAGACGGACTTGATGGGCAGACAGGGGGTTTTACTTTAAAACAACTAAAAGCCGCCACTAACGACTTCGATTATGATAACAAAATTGGAGAAGGTGGCTTTGGTCCTGTCTACAAGGGTCAATTGCCTGATGGTAGAGTGATAGCCGTTAAACAGCTTTCGTCCATGTCAAGGCAAGGAAATCGTGAGTTCTTAAATGAGATGGGCATGATTTCTTGTTTGCAACATCCGAATCTTGTGAAACTTCATGGATGTTGTATCGAAGGAGGTCAGTTATTGCTGGTCTATGAGTACATGGAGAATAATAACCTTGCACGAGCTTTGTTCGGCCGAGAAAATCATCTTAAATTGGACTGGGCAACAAGGCTTAAGATCTGCATTGGGTTAGCAAGAGGACTAGCTTTTCTCCATGAAGAATCAATACTTAAAATTGTTCACCGAGACATCAAAGCGACTAATGTGCTGCTTGATGAGGACTTGAACCCTAAAATATCTGACTTTGGATTGGCAAAGCTTGATGAAGAGGAGAAGACACACATAAGCACCCGAGTAGCTGGGACCATAGGATATATGGCACCAGAATACGCACTATGGGGTCACCTGACCTACAAAGCGGATGTTTACAGTTTTGGAGTAGTGGCCTTGGAAATTATCAGTGGGAAGAACAACAACAATTATATTCCGAGTGATGATTGGGTTTGCCTTTTAGATTGGGCTTGTCATTTGCAACAAACAGGTAACTTATTGGAGCTGATCGATGAGAAGTTAGGTTCCGAGTTTGACCAAAAAGAAGCAGAGATCGATCATGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase_Tyr

Protein Analysis

818

Amino Acids

90.61

Weight (kDa)

5.15

Isoelectric Point (pI)

35.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29750 AT1G29750 AT1G29750
fragaria_vesca	FvH4_3g07010 FvH4_3g07010 FvH4_3g07045 FvH4_3g07045 FvH4_3g07045 FvH4_3g07045 FvH4_3g07045 FvH4_3g07045
malus_domestica	MD00G1006700.v1.1 MD00G1006800.v1.1 MD00G1006900.v1.1 MD00G1007000.v1.1 MD10G1273400.v1.1 MD10G1273600.v1.1
prunus_persica	Prupe.4G069100_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1 Prupe.4G069200_v2.0.a1
pyrus_communis	pycom05g27170 pycom05g27180 pycom05g27210 pycom05g27220 pycom10g22820 pycom10g22840
rosa_chinensis	RchiOBHm_Chr5g0012071 RchiOBHm_Chr5g0012081 RchiOBHm_Chr5g0012091 RchiOBHm_Chr5g0012101
rosa_laevigata	RLG00000031884 RLG00000031885 RLG00000031889
rosa_multiflora	Rmu_sc0002519.1_g000010 Rmu_sc0002519.1_g000013 Rmu_sc0008172.1_g000001 Rmu_sc0009761.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064490 Rroxscaffold_1G00064500 Rroxscaffold_1G00064510
rosa_rugosa	Rorug05G0000100 Rorug05G0000200 Rorug05G0000200
rosa_samantha	Rh5AG092900 Rh5BG089200 Rh5CG102700
rosa_wichuraiana	Rw5G008110 Rw5G008120 Rw5G008140 Rw5G008150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	947
Acc36I	ACCTGC	1 cut(s)	802
AccB1I	GGYRCC	1 cut(s)	2215
AccI	GTMKAC	1 cut(s)	1752
AccIII	TCCGGA	2 cut(s)	206, 834
AciI	CCGC	4 cut(s)	1223, 1306, 1695, 2255
AclWI	GGATC	3 cut(s)	1396, 1585, 1598
AcoI	YGGCCR	1 cut(s)	1969
AcsI	RAATTY	2 cut(s)	313, 645
AcuI	CTGAAG	1 cut(s)	404
AfaI	GTAC	6 cut(s)	70, 717, 761, 1429, 1610, 1934
AfiI	CCNNNNNNNGG	2 cut(s)	1448, 1812
AflII	CTTAAG	2 cut(s)	859, 2009
AflIII	ACRYGT	1 cut(s)	609
AjnI	CCWGG	1 cut(s)	603
AjuI	GAANNNNNNNTTGG	2 cut(s)	1725, 1757
AluBI	AGCT	9 cut(s)	226, 653, 840, 1798, 1961, 2042, 2155, 2195, 2392
AluI	AGCT	9 cut(s)	226, 653, 840, 1798, 1961, 2042, 2155, 2195, 2392
Alw21I	GWGCWC	2 cut(s)	732, 842
Alw26I	GTCTC	4 cut(s)	978, 1053, 1638, 2076
AlwI	GGATC	3 cut(s)	1396, 1585, 1598
Ama87I	CYCGRG	2 cut(s)	785, 2187
Aor13HI	TCCGGA	2 cut(s)	206, 834
AoxI	GGCC	4 cut(s)	529, 781, 1969, 2280
ApeKI	GCWGC	1 cut(s)	2104
ApoI	RAATTY	2 cut(s)	313, 645
Asp700I	GAANNNNTTC	2 cut(s)	830, 1313
AspLEI	GCGC	1 cut(s)	1272
AspS9I	GGNCC	5 cut(s)	425, 782, 1460, 1745, 2199
AsuHPI	GGTGA	3 cut(s)	1208, 2069, 2231
AvaI	CYCGRG	2 cut(s)	785, 2187
AvaII	GGWCC	4 cut(s)	425, 1460, 1745, 2199
BamHI	GGATCC	1 cut(s)	1590
BanI	GGYRCC	1 cut(s)	2215
BanII	GRGCYC	1 cut(s)	842
BarI	GAAGNNNNNNTAC	4 cut(s)	752, 784, 2046, 2078
BauI	CACGAG	1 cut(s)	1956
BbsI	GAAGAC	2 cut(s)	863, 2177
Bbv12I	GWGCWC	2 cut(s)	732, 842
BbvI	GCAGC	1 cut(s)	2091
BccI	CCATC	5 cut(s)	437, 731, 1649, 1766, 1837
BceAI	ACGGC	2 cut(s)	1466, 1772
BcgI	CGANNNNNNTGC	6 cut(s)	776, 810, 1805, 1839, 2083, 2117
BciT130I	CCWGG	1 cut(s)	605
BclI	TGATCA	1 cut(s)	453
BcoDI	GTCTC	4 cut(s)	978, 1053, 1638, 2076
BfaI	CTAG	3 cut(s)	533, 1571, 2039
BfmI	CTRYAG	2 cut(s)	1008, 1353
BfrI	CTTAAG	2 cut(s)	859, 2009
BfuAI	ACCTGC	1 cut(s)	802
BglII	AGATCT	1 cut(s)	2013
BisI	GCNGC	2 cut(s)	1695, 2105
BlsI	GCNGC	2 cut(s)	1696, 2106
Bme1390I	CCNGG	1 cut(s)	605
Bme18I	GGWCC	4 cut(s)	425, 1460, 1745, 2199
BmeT110I	CYCGRG	2 cut(s)	785, 2187
BmgT120I	GGNCC	5 cut(s)	425, 782, 1460, 1745, 2199
BmiI	GGNNCC	8 cut(s)	426, 427, 784, 1462, 1592, 2200, 2217, 2413
BmrFI	CCNGG	1 cut(s)	605
BmrI	ACTGGG	1 cut(s)	2005
BmsI	GCATC	2 cut(s)	1018, 1121
BmuI	ACTGGG	1 cut(s)	2005
BpiI	GAAGAC	2 cut(s)	863, 2177
BplI	GAGNNNNNCTC	2 cut(s)	1551, 1583
BpmI	CTGGAG	3 cut(s)	588, 1077, 1566
BpuEI	CTTGAG	1 cut(s)	716
Bsa29I	ATCGAT	2 cut(s)	2397, 2442
BsaJI	CCNNGG	2 cut(s)	1482, 2283
BsaWI	WCCGGW	2 cut(s)	206, 834
BsaXI	ACNNNNNCTCC	4 cut(s)	1217, 1247, 1539, 1569
Bsc4I	CCNNNNNNNGG	2 cut(s)	1448, 1812
Bse1I	ACTGG	6 cut(s)	283, 509, 697, 1060, 1549, 2000
BseAI	TCCGGA	2 cut(s)	206, 834
BseBI	CCWGG	1 cut(s)	605
BseCI	ATCGAT	2 cut(s)	2397, 2442
BseDI	CCNNGG	2 cut(s)	1482, 2283
BseGI	GGATG	9 cut(s)	176, 429, 622, 742, 1075, 1300, 1867, 1898, 2263
BseLI	CCNNNNNNNGG	2 cut(s)	1448, 1812
BseMII	CTCAG	2 cut(s)	539, 738
BseNI	ACTGG	6 cut(s)	283, 509, 697, 1060, 1549, 2000
BseRI	GAGGAG	3 cut(s)	1005, 1464, 2180
BseX3I	CGGCCG	1 cut(s)	1969
BseXI	GCAGC	1 cut(s)	2091
BseYI	CCCAGC	1 cut(s)	2195
BsgI	GTGCAG	2 cut(s)	111, 116
Bsh1285I	CGRYCG	1 cut(s)	1972
BshFI	GGCC	4 cut(s)	531, 783, 1971, 2282
BshNI	GGYRCC	1 cut(s)	2215
BshVI	ATCGAT	2 cut(s)	2397, 2442
BsiEI	CGRYCG	1 cut(s)	1972
BsiHKAI	GWGCWC	2 cut(s)	732, 842
BsiHKCI	CYCGRG	2 cut(s)	785, 2187
BsiSI	CCGG	2 cut(s)	207, 835
BslFI	GGGAC	4 cut(s)	438, 1446, 1540, 2212
BslI	CCNNNNNNNGG	2 cut(s)	1448, 1812
BsmAI	GTCTC	4 cut(s)	978, 1053, 1638, 2076
BsmBI	CGTCTC	2 cut(s)	978, 1638
BsmFI	GGGAC	4 cut(s)	438, 1446, 1540, 2212
BsnI	GGCC	4 cut(s)	531, 783, 1971, 2282
BsoBI	CYCGRG	2 cut(s)	785, 2187
Bsp1286I	GDGCHC	2 cut(s)	732, 842
Bsp13I	TCCGGA	2 cut(s)	206, 834
Bsp143I	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
BspACI	CCGC	4 cut(s)	1223, 1306, 1695, 2255
BspANI	GGCC	4 cut(s)	531, 783, 1971, 2282
BspCNI	CTCAG	2 cut(s)	540, 737
BspDI	ATCGAT	2 cut(s)	2397, 2442
BspEI	TCCGGA	2 cut(s)	206, 834
BspLI	GGNNCC	8 cut(s)	426, 427, 784, 1462, 1592, 2200, 2217, 2413
BspMAI	CTGCAG	1 cut(s)	1012
BspMI	ACCTGC	1 cut(s)	802
BspPI	GGATC	3 cut(s)	1396, 1585, 1598
BspQI	GCTCTTC	1 cut(s)	847
BspT107I	GGYRCC	1 cut(s)	2215
BspTI	CTTAAG	2 cut(s)	859, 2009
BsrI	ACTGG	6 cut(s)	283, 509, 697, 1060, 1549, 2000
BssECI	CCNNGG	2 cut(s)	1482, 2283
BssMI	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
BssSI	CACGAG	1 cut(s)	1956
BssT1I	CCWWGG	1 cut(s)	2283
Bst2BI	CACGAG	1 cut(s)	1956
Bst2UI	CCWGG	1 cut(s)	605
Bst4CI	ACNGT	6 cut(s)	557, 896, 949, 1207, 1233, 2267
Bst6I	CTCTTC	3 cut(s)	120, 847, 2157
BstAFI	CTTAAG	2 cut(s)	859, 2009
BstC8I	GCNNGC	2 cut(s)	408, 1147
BstDEI	CTNAG	6 cut(s)	308, 548, 664, 724, 1186, 1396
BstDSI	CCRYGG	1 cut(s)	1482
BstEII	GGTNACC	1 cut(s)	2237
BstENI	CCTNNNNNAGG	1 cut(s)	1446
BstF5I	GGATG	9 cut(s)	176, 429, 622, 742, 1075, 1300, 1867, 1898, 2263
BstHHI	GCGC	1 cut(s)	1272
BstKTI	GATC	8 cut(s)	456, 754, 1404, 1593, 2016, 2397, 2442, 2446
BstMAI	GTCTC	4 cut(s)	978, 1053, 1638, 2076
BstMBI	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
BstMCI	CGRYCG	1 cut(s)	1972
BstNI	CCWGG	1 cut(s)	605
BstNSI	RCATGY	3 cut(s)	410, 613, 923
BstPI	GGTNACC	1 cut(s)	2237
BstSCI	CCNGG	1 cut(s)	603
BstSFI	CTRYAG	2 cut(s)	1008, 1353
BstV1I	GCAGC	1 cut(s)	2091
BstV2I	GAAGAC	2 cut(s)	863, 2177
BstX2I	RGATCY	3 cut(s)	1401, 1590, 2013
BstXI	CCANNNNNNTGG	3 cut(s)	84, 227, 588
BstYI	RGATCY	3 cut(s)	1401, 1590, 2013
BstZI	CGGCCG	1 cut(s)	1969
Bsu15I	ATCGAT	2 cut(s)	2397, 2442
BsuRI	GGCC	4 cut(s)	531, 783, 1971, 2282
BsuTUI	ATCGAT	2 cut(s)	2397, 2442
BtgI	CCRYGG	1 cut(s)	1482
BtsCI	GGATG	9 cut(s)	176, 429, 622, 742, 1075, 1300, 1867, 1898, 2263
BtsI	GCAGTG	2 cut(s)	99, 1005
BtsIMutI	CAGTG	9 cut(s)	99, 276, 732, 945, 1005, 1053, 1384, 1542, 2302
BveI	ACCTGC	1 cut(s)	802
Cac8I	GCNNGC	2 cut(s)	408, 1147
CfoI	GCGC	1 cut(s)	1272
Cfr13I	GGNCC	5 cut(s)	425, 782, 1460, 1745, 2199
ClaI	ATCGAT	2 cut(s)	2397, 2442
Csp6I	GTAC	6 cut(s)	69, 716, 760, 1428, 1609, 1933
CviQI	GTAC	6 cut(s)	69, 716, 760, 1428, 1609, 1933
DdeI	CTNAG	6 cut(s)	308, 548, 664, 724, 1186, 1396
DpnI	GATC	8 cut(s)	455, 753, 1403, 1592, 2015, 2396, 2441, 2445
DpnII	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
DraI	TTTAAA	2 cut(s)	1023, 1680
DrdI	GACNNNNNNGTC	1 cut(s)	947
DseDI	GACNNNNNNGTC	1 cut(s)	947
EaeI	YGGCCR	1 cut(s)	1969
EagI	CGGCCG	1 cut(s)	1969
Eam1104I	CTCTTC	3 cut(s)	120, 847, 2157
EarI	CTCTTC	3 cut(s)	120, 847, 2157
Ecl136II	GAGCTC	1 cut(s)	840
EclXI	CGGCCG	1 cut(s)	1969
Eco130I	CCWWGG	1 cut(s)	2283
Eco147I	AGGCCT	1 cut(s)	531
Eco24I	GRGCYC	1 cut(s)	842
Eco32I	GATATC	2 cut(s)	1081, 1282
Eco47I	GGWCC	4 cut(s)	425, 1460, 1745, 2199
Eco52I	CGGCCG	1 cut(s)	1969
Eco53kI	GAGCTC	1 cut(s)	840
Eco57I	CTGAAG	1 cut(s)	404
Eco88I	CYCGRG	2 cut(s)	785, 2187
Eco91I	GGTNACC	1 cut(s)	2237
EcoICRI	GAGCTC	1 cut(s)	840
EcoNI	CCTNNNNNAGG	1 cut(s)	1446
EcoO109I	RGGNCCY	2 cut(s)	425, 782
EcoO65I	GGTNACC	1 cut(s)	2237
EcoRII	CCWGG	1 cut(s)	603
EcoRV	GATATC	2 cut(s)	1081, 1282
EcoT14I	CCWWGG	1 cut(s)	2283
EcoT22I	ATGCAT	1 cut(s)	408
EcoT38I	GRGCYC	1 cut(s)	842
ErhI	CCWWGG	1 cut(s)	2283
Esp3I	CGTCTC	2 cut(s)	978, 1638
FaqI	GGGAC	4 cut(s)	438, 1446, 1540, 2212
FbaI	TGATCA	1 cut(s)	453
FblI	GTMKAC	1 cut(s)	1752
Fnu4HI	GCNGC	2 cut(s)	1695, 2105
FokI	GGATG	9 cut(s)	163, 416, 629, 749, 1082, 1307, 1854, 1905, 2270
FriOI	GRGCYC	1 cut(s)	842
Fsp4HI	GCNGC	2 cut(s)	1695, 2105
FspBI	CTAG	3 cut(s)	533, 1571, 2039
GlaI	GCGC	1 cut(s)	1271
GluI	GCNGC	2 cut(s)	1695, 2105
GsaI	CCCAGC	1 cut(s)	2199
GsuI	CTGGAG	3 cut(s)	588, 1077, 1566
HaeIII	GGCC	4 cut(s)	531, 783, 1971, 2282
HapII	CCGG	2 cut(s)	207, 835
HhaI	GCGC	1 cut(s)	1272
Hin6I	GCGC	1 cut(s)	1270
HinP1I	GCGC	1 cut(s)	1270
HincII	GTYRAC	1 cut(s)	102
HindII	GTYRAC	1 cut(s)	102
HindIII	AAGCTT	1 cut(s)	2153
HpaI	GTTAAC	1 cut(s)	102
HpaII	CCGG	2 cut(s)	207, 835
HphI	GGTGA	3 cut(s)	1208, 2069, 2231
Hpy166II	GTNNAC	7 cut(s)	102, 716, 899, 1236, 1753, 2077, 2263
Hpy188I	TCNGA	8 cut(s)	147, 549, 1406, 1492, 1872, 2137, 2325, 2416
Hpy8I	GTNNAC	7 cut(s)	102, 716, 899, 1236, 1753, 2077, 2263
HpyAV	CCTTC	9 cut(s)	142, 444, 947, 974, 992, 1260, 1303, 1727, 1898
HpyCH4III	ACNGT	6 cut(s)	557, 896, 949, 1207, 1233, 2267
HpyCH4IV	ACGT	1 cut(s)	585
HpyF3I	CTNAG	6 cut(s)	308, 548, 664, 724, 1186, 1396
HpySE526I	ACGT	1 cut(s)	585
HspAI	GCGC	1 cut(s)	1270
KflI	GGGWCCC	1 cut(s)	425
Kpn2I	TCCGGA	2 cut(s)	206, 834
Ksp22I	TGATCA	1 cut(s)	453
KspAI	GTTAAC	1 cut(s)	102
Kzo9I	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
LguI	GCTCTTC	1 cut(s)	847
LmnI	GCTCC	3 cut(s)	837, 1559, 2389
Lsp1109I	GCAGC	1 cut(s)	2091
LweI	GCATC	2 cut(s)	1018, 1121
MaeI	CTAG	3 cut(s)	533, 1571, 2039
MaeII	ACGT	1 cut(s)	585
MaeIII	GTNAC	7 cut(s)	557, 1196, 1207, 1381, 1540, 2237, 2378
MalI	GATC	8 cut(s)	455, 753, 1403, 1592, 2015, 2396, 2441, 2445
MboI	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
MfeI	CAATTG	1 cut(s)	1763
MflI	RGATCY	3 cut(s)	1401, 1590, 2013
MhlI	GDGCHC	2 cut(s)	732, 842
MlyI	GAGTC	4 cut(s)	716, 1267, 1340, 1557
MmeI	TCCRAC	2 cut(s)	462, 594
Mph1103I	ATGCAT	1 cut(s)	408
MroI	TCCGGA	2 cut(s)	206, 834
MroXI	GAANNNNTTC	2 cut(s)	830, 1313
MslI	CAYNNNNRTG	1 cut(s)	411
MspCI	CTTAAG	2 cut(s)	859, 2009
MspI	CCGG	2 cut(s)	207, 835
MspR9I	CCNGG	1 cut(s)	605
MunI	CAATTG	1 cut(s)	1763
MvaI	CCWGG	1 cut(s)	605
NdeII	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
NlaIV	GGNNCC	8 cut(s)	426, 427, 784, 1462, 1592, 2200, 2217, 2413
NmeAIII	GCCGAG	1 cut(s)	1997
NmuCI	GTSAC	4 cut(s)	1196, 1381, 1540, 2237
NsiI	ATGCAT	1 cut(s)	408
NspI	RCATGY	3 cut(s)	410, 613, 923
PaeI	GCATGC	1 cut(s)	410
PceI	AGGCCT	1 cut(s)	531
PciI	ACATGT	1 cut(s)	609
PciSI	GCTCTTC	1 cut(s)	847
PdmI	GAANNNNTTC	2 cut(s)	830, 1313
PkrI	GCNGC	2 cut(s)	1696, 2106
PleI	GAGTC	4 cut(s)	716, 1266, 1339, 1556
PpsI	GAGTC	4 cut(s)	716, 1266, 1339, 1556
PpuMI	RGGWCCY	1 cut(s)	425
PscI	ACATGT	1 cut(s)	609
Psp124BI	GAGCTC	1 cut(s)	842
Psp5II	RGGWCCY	1 cut(s)	425
Psp6I	CCWGG	1 cut(s)	603
PspEI	GGTNACC	1 cut(s)	2237
PspFI	CCCAGC	1 cut(s)	2195
PspGI	CCWGG	1 cut(s)	603
PspN4I	GGNNCC	8 cut(s)	426, 427, 784, 1462, 1592, 2200, 2217, 2413
PspPI	GGNCC	5 cut(s)	425, 782, 1460, 1745, 2199
PspPPI	RGGWCCY	1 cut(s)	425
PstI	CTGCAG	1 cut(s)	1012
PsuI	RGATCY	3 cut(s)	1401, 1590, 2013
RsaI	GTAC	6 cut(s)	70, 717, 761, 1429, 1610, 1934
RsaNI	GTAC	6 cut(s)	69, 716, 760, 1428, 1609, 1933
RseI	CAYNNNNRTG	1 cut(s)	411
SacI	GAGCTC	1 cut(s)	842
SapI	GCTCTTC	1 cut(s)	847
SatI	GCNGC	2 cut(s)	1695, 2105
Sau3AI	GATC	8 cut(s)	453, 751, 1401, 1590, 2013, 2394, 2439, 2443
Sau96I	GGNCC	5 cut(s)	425, 782, 1460, 1745, 2199
SchI	GAGTC	4 cut(s)	716, 1267, 1340, 1557
ScrFI	CCNGG	1 cut(s)	605
SduI	GDGCHC	2 cut(s)	732, 842
SfaNI	GCATC	2 cut(s)	1018, 1121
SfcI	CTRYAG	2 cut(s)	1008, 1353
SinI	GGWCC	4 cut(s)	425, 1460, 1745, 2199
SmiMI	CAYNNNNRTG	1 cut(s)	411
SmlI	CTYRAG	3 cut(s)	731, 859, 2009
SmoI	CTYRAG	3 cut(s)	731, 859, 2009
SphI	GCATGC	1 cut(s)	410
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	4 cut(s)	1223, 1306, 1695, 2255
SspI	AATATT	2 cut(s)	163, 1321
SspMI	CTAG	3 cut(s)	533, 1571, 2039
SstI	GAGCTC	1 cut(s)	842
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	1 cut(s)	603
StyI	CCWWGG	1 cut(s)	2283
TaaI	ACNGT	6 cut(s)	557, 896, 949, 1207, 1233, 2267
TaiI	ACGT	1 cut(s)	588
TaqI	TCGA	5 cut(s)	951, 1710, 1902, 2397, 2442
TatI	WGTACW	1 cut(s)	1932
TauI	GCSGC	1 cut(s)	1697
TscAI	CASTG	9 cut(s)	99, 283, 732, 952, 1012, 1060, 1384, 1549, 2302
TseFI	GTSAC	4 cut(s)	1196, 1381, 1540, 2237
TseI	GCWGC	1 cut(s)	2104
Tsp45I	GTSAC	4 cut(s)	1196, 1381, 1540, 2237
TspDTI	ATGAA	6 cut(s)	993, 1054, 1311, 1877, 2067, 2175
TspGWI	ACGGA	2 cut(s)	1002, 1662
TspRI	CASTG	9 cut(s)	99, 283, 732, 952, 1012, 1060, 1384, 1549, 2302
Vha464I	CTTAAG	2 cut(s)	859, 2009
VpaK11BI	GGWCC	4 cut(s)	425, 1460, 1745, 2199
XagI	CCTNNNNNAGG	1 cut(s)	1446
XapI	RAATTY	2 cut(s)	313, 645
XceI	RCATGY	3 cut(s)	410, 613, 923
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2209
XmiI	GTMKAC	1 cut(s)	1752
XmnI	GAANNNNTTC	2 cut(s)	830, 1313
XspI	CTAG	3 cut(s)	533, 1571, 2039
Zsp2I	ATGCAT	1 cut(s)	408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.