pycom10g22840

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
25144781 .. 25147636
2856 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g22840.1

Sequence Viewer

Length: 1923 bp
ATGAGCCAAATTTTGCTCAAATCTTTCTGCTCATTCTGTGACAGAAGGGGAATTCTTCCGTGCTTGAAGAATTTTAAGTGCCCACGATATGGAGGAGTTGAAGGTGGCAGTGCAAAATATTTTAGGAATGAGAAAAGCATGTGGGGATTTAGTAGCACTGGTGACTTCATGGATGACTTAGAGCCGCAAAATACACGCCACTCTATATCTCTGGTGTCTTCCAATCTTTCTGAACTATATACAACAGCACGCCTATCTCCGCTTTCACTTACTTATTTCCACTATTGTTTAGAAAATGGAATTTACACTATAACTCTCCTCTTTGCGGAAATCATGTTCACAAATGAAGAAAGATACAGTAGTCTTGGGAGGTGTATTTTCGATGTCTATGTTCAGGAAAGGTTGGTGTGGAAGGATTTCAATATCGAATATGAGGCAGGTATGGCTCGCAAGAGATTAATTAAGAAAGTATCTAATGTCAACGTGACAAGTAACGTCTTAGAGATCCGATTCTATTGGGCTGGAAAAGGGACAATGGTGATTCCAGAGAAAGGAAATTATGGTCCCCTTATATCAGCCATCTCTGTGGTTTCTGATTTTAAACCTTGTAAAAATGACGGAACTGTGCGAGCTAATTATATCATTGCCCGTGTTGGTGTTGGCACTGTTGGGGGATTATGCCTAACACTCTTCATGCTGGCAATCCTTTGGTGGAAAGGATGTTTGGGAGGAAAAAGGGGGAGACAACAAGATATTGTAGGACGAGATATGCAGATGCAAACTTTTACTTTGGAGCAAATCAAAGCTGCCAGCAACAACTTTGATTCTGCAAACAAGGTTGGAGAAGGCGGTTTTGGCCCTGTCTACAAGGGTCAGCTACCTGATGGTTCACTGATAGCAATTAAGCAGCTCTCATCCAATTCAAGGCAAGGAAATCGTGAATTTGTAAATGAGATGGGCATGATATCTTGTTTACAGCATCCGAATATAGTGAAACTGCATGGATACTGCATTGAAGAGGATCACTTATTGCTGGTGTATGAATACATGGAAAACAATAGTCTTGCACATGCCTTATTTGATCAGGAGAACCATCAGATTAAATTGGACTGGCCTACAAGGTTTAAGATCGATCACACCTGCGTTGGGATAGCAAGAGGTTTAGCTTTTCTCCATGAAGAATCAAGAATCAAGATTGTTCACAGAGACATAAAAGCAACCAATGTACTGCTGGATGCGGATTTGAACCCGAAAATATCCGACTTTGGATTGGCTAAACTTTATGAAGAGGAGAAAACACACATTAGCACCAAAGTCGCAGGAACCATGTCAGTTGCAATTAAATTTTCTTCGATGCACGTTTACATTTTATGCAGTTTTTTTTTCTTTTTAATTGGAATAAAAAAAATGTTTGGACGCAGAGGATATATGGCACCAGAATATGCGCTATGGGGTCACTTGACCAACAAGGCAGATGTTTACAGTTTCCGAGTTGTTGCCTTGGAAATTGCTAGTGGGAAGAAAAAGAATCATGTGCCAAATAACAGTTGCTTCTCTCTCCTAGACTGGGCCTATGAGTTGCAACAAACTGGAAACTTGAAGGAGCTGATTGATGAGAGCTTAGGGAATGAAGTCAATGACAAAGAAGCAGAAGTTATGGTTAATGTCATTCTGCTGTGCACAAATGTGTCTCCATCGCTTAGGCCTACCATGTCCGAGGTGGTGAGCATGCTCGAAGGACAAACACAAGTCCCGGACATTATCCCAGACGTCAGTACTTATGCCGATGATTTGAGGTTCAAATCCATGAGAGACGTACATCATCAAAGCCAAACACACAGTTCGAGTGGAAGGCAATCTCAGAATTCGGCAACTCTTAGTACATTTTGGTCGTCCTCTTCATCACATCAGGCCATGACTTGA

Protein Analysis

641

Amino Acids

72.12

Weight (kDa)

7.84

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 63 - 194 2.3e-32 Malectin domain
Pkinase PF00069 276 - 576 8.8e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 277 - 438 5.8e-33 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 476 - 578 2.6e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1148
AatII GACGTC 1 cut(s) 1773
Acc36I ACCTGC 2 cut(s) 428, 1148
AccB1I GGYRCC 1 cut(s) 1432
AccB7I CCANNNNNTGG 1 cut(s) 89
AccI GTMKAC 1 cut(s) 864
AciI CCGC 5 cut(s) 185, 260, 326, 849, 1238
AclWI GGATC 2 cut(s) 499, 1029
AcsI RAATTY 7 cut(s) 9, 51, 70, 300, 941, 1343, 1864
AcyI GRCGYC 1 cut(s) 1770
AfaI GTAC 4 cut(s) 1227, 1777, 1818, 1882
AfiI CCNNNNNNNGG 6 cut(s) 89, 325, 551, 924, 1146, 1567
AgsI TTSAA 8 cut(s) 67, 101, 421, 924, 1016, 1246, 1600, 1801
AjuI GAANNNNNNNTTGG 4 cut(s) 707, 739, 837, 869
AleI CACNNNNGTG 1 cut(s) 1685
AloI GAACNNNNNNTCC 2 cut(s) 320, 352
AluBI AGCT 7 cut(s) 632, 806, 877, 910, 1166, 1606, 1620
AluI AGCT 7 cut(s) 632, 806, 877, 910, 1166, 1606, 1620
Alw21I GWGCWC 1 cut(s) 1682
Alw26I GTCTC 4 cut(s) 736, 1200, 1695, 1806
Alw44I GTGCAC 1 cut(s) 1678
AlwI GGATC 2 cut(s) 499, 1029
AoxI GGCC 5 cut(s) 856, 1112, 1569, 1703, 1911
ApaLI GTGCAC 1 cut(s) 1678
ApeKI GCWGC 2 cut(s) 806, 907
ApoI RAATTY 7 cut(s) 9, 51, 70, 300, 941, 1343, 1864
AseI ATTAAT 1 cut(s) 458
Asp700I GAANNNNTTC 1 cut(s) 416
AspLEI GCGC 1 cut(s) 1447
AspS9I GGNCC 3 cut(s) 563, 857, 1569
AsuC2I CCSGG 1 cut(s) 1754
AsuHPI GGTGA 3 cut(s) 173, 550, 1735
AvaII GGWCC 1 cut(s) 563
BaeGI GKGCMC 2 cut(s) 83, 1682
BaeI ACNNNNGTAYC 2 cut(s) 346, 379
BanI GGYRCC 1 cut(s) 1432
BbsI GAAGAC 1 cut(s) 210
Bbv12I GWGCWC 1 cut(s) 1682
BbvI GCAGC 2 cut(s) 793, 919
BccI CCATC 5 cut(s) 587, 878, 949, 1101, 1702
BcgI CGANNNNNNTGC 4 cut(s) 917, 951, 1297, 1331
BciVI GTATCC 1 cut(s) 998
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 1 cut(s) 1754
BcoDI GTCTC 4 cut(s) 736, 1200, 1695, 1806
BfaI CTAG 2 cut(s) 1512, 1562
BfuAI ACCTGC 2 cut(s) 428, 1148
BfuI GTATCC 1 cut(s) 998
BisI GCNGC 3 cut(s) 185, 807, 908
BlsI GCNGC 3 cut(s) 186, 808, 909
BmcAI AGTACT 1 cut(s) 1777
Bme1390I CCNGG 1 cut(s) 1754
Bme18I GGWCC 1 cut(s) 563
BmgT120I GGNCC 3 cut(s) 563, 857, 1569
BmiI GGNNCC 3 cut(s) 565, 1324, 1434
BmrFI CCNGG 1 cut(s) 1754
BmrI ACTGGG 1 cut(s) 1576
BmsI GCATC 4 cut(s) 765, 988, 1225, 1344
BmuI ACTGGG 1 cut(s) 1576
BpiI GAAGAC 1 cut(s) 210
Bpu10I CCTNAGC 2 cut(s) 1621, 1700
BpuMI CCSGG 1 cut(s) 1754
Bsa29I ATCGAT 1 cut(s) 1131
BsaHI GRCGYC 1 cut(s) 1770
BsaJI CCNNGG 2 cut(s) 1500, 1716
Bsc4I CCNNNNNNNGG 6 cut(s) 89, 325, 551, 924, 1146, 1567
Bse1I ACTGG 4 cut(s) 163, 1115, 1571, 1594
Bse3DI GCAATG 1 cut(s) 642
BseCI ATCGAT 1 cut(s) 1131
BseDI CCNNGG 2 cut(s) 1500, 1716
BseGI GGATG 5 cut(s) 178, 725, 914, 979, 1240
BseLI CCNNNNNNNGG 6 cut(s) 89, 325, 551, 924, 1146, 1567
BseMI GCAATG 1 cut(s) 642
BseMII CTCAG 1 cut(s) 1874
BseNI ACTGG 4 cut(s) 163, 1115, 1571, 1594
BseRI GAGGAG 3 cut(s) 108, 308, 1304
BseSI GKGCMC 2 cut(s) 83, 1682
BseXI GCAGC 2 cut(s) 793, 919
BshFI GGCC 5 cut(s) 858, 1114, 1571, 1705, 1913
BshNI GGYRCC 1 cut(s) 1432
BshVI ATCGAT 1 cut(s) 1131
BsiHKAI GWGCWC 1 cut(s) 1682
BsiSI CCGG 1 cut(s) 1754
BslFI GGGAC 3 cut(s) 544, 549, 1736
BslI CCNNNNNNNGG 6 cut(s) 89, 325, 551, 924, 1146, 1567
BsmAI GTCTC 4 cut(s) 736, 1200, 1695, 1806
BsmBI CGTCTC 1 cut(s) 1806
BsmFI GGGAC 3 cut(s) 544, 549, 1736
BsnI GGCC 5 cut(s) 858, 1114, 1571, 1705, 1913
Bsp1286I GDGCHC 2 cut(s) 83, 1682
Bsp143I GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
BspACI CCGC 5 cut(s) 185, 260, 326, 849, 1238
BspANI GGCC 5 cut(s) 858, 1114, 1571, 1705, 1913
BspCNI CTCAG 1 cut(s) 1873
BspDI ATCGAT 1 cut(s) 1131
BspLI GGNNCC 3 cut(s) 565, 1324, 1434
BspMI ACCTGC 2 cut(s) 428, 1148
BspPI GGATC 2 cut(s) 499, 1029
BspT107I GGYRCC 1 cut(s) 1432
BsrDI GCAATG 1 cut(s) 642
BsrI ACTGG 4 cut(s) 163, 1115, 1571, 1594
BssECI CCNNGG 2 cut(s) 1500, 1716
BssMI GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
BssNI GRCGYC 1 cut(s) 1770
BssT1I CCWWGG 1 cut(s) 1500
Bst4CI ACNGT 6 cut(s) 359, 625, 667, 1484, 1547, 1841
Bst6I CTCTTC 4 cut(s) 695, 1011, 1281, 1903
BstACI GRCGYC 1 cut(s) 1770
BstC8I GCNNGC 6 cut(s) 250, 448, 630, 699, 811, 1730
BstDEI CTNAG 6 cut(s) 178, 499, 1621, 1700, 1860, 1877
BstF5I GGATG 5 cut(s) 178, 725, 914, 979, 1240
BstHHI GCGC 1 cut(s) 1447
BstKTI GATC 5 cut(s) 507, 1024, 1084, 1131, 1135
BstMAI GTCTC 4 cut(s) 736, 1200, 1695, 1806
BstMBI GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
BstMWI GCNNNNNNNGC 2 cut(s) 443, 855
BstNSI RCATGY 3 cut(s) 142, 1073, 1732
BstSCI CCNGG 1 cut(s) 1752
BstSLI GKGCMC 2 cut(s) 83, 1682
BstV1I GCAGC 2 cut(s) 793, 919
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 1 cut(s) 504
BstXI CCANNNNNNTGG 1 cut(s) 586
BstYI RGATCY 1 cut(s) 504
Bsu15I ATCGAT 1 cut(s) 1131
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 5 cut(s) 858, 1114, 1571, 1705, 1913
BsuTUI ATCGAT 1 cut(s) 1131
BtgZI GCGATG 1 cut(s) 1680
BtsCI GGATG 5 cut(s) 178, 725, 914, 979, 1240
BtsI GCAGTG 1 cut(s) 115
BtsIMutI CAGTG 4 cut(s) 115, 156, 663, 890
BveI ACCTGC 2 cut(s) 428, 1148
Cac8I GCNNGC 6 cut(s) 250, 448, 630, 699, 811, 1730
CfoI GCGC 1 cut(s) 1447
Cfr13I GGNCC 3 cut(s) 563, 857, 1569
ClaI ATCGAT 1 cut(s) 1131
CseI GACGC 1 cut(s) 1425
Csp6I GTAC 4 cut(s) 1226, 1776, 1817, 1881
CviQI GTAC 4 cut(s) 1226, 1776, 1817, 1881
DdeI CTNAG 6 cut(s) 178, 499, 1621, 1700, 1860, 1877
DpnI GATC 5 cut(s) 506, 1023, 1083, 1130, 1134
DpnII GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
DraI TTTAAA 1 cut(s) 601
Eam1104I CTCTTC 4 cut(s) 695, 1011, 1281, 1903
EarI CTCTTC 4 cut(s) 695, 1011, 1281, 1903
Eco130I CCWWGG 1 cut(s) 1500
Eco147I AGGCCT 1 cut(s) 1705
Eco32I GATATC 1 cut(s) 966
Eco47I GGWCC 1 cut(s) 563
EcoRI GAATTC 2 cut(s) 51, 1864
EcoRV GATATC 1 cut(s) 966
EcoT14I CCWWGG 1 cut(s) 1500
ErhI CCWWGG 1 cut(s) 1500
Esp3I CGTCTC 1 cut(s) 1806
FaqI GGGAC 3 cut(s) 544, 549, 1736
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 1 cut(s) 864
Fnu4HI GCNGC 3 cut(s) 185, 807, 908
FokI GGATG 5 cut(s) 185, 732, 901, 966, 1247
Fsp4HI GCNGC 3 cut(s) 185, 807, 908
FspBI CTAG 2 cut(s) 1512, 1562
GlaI GCGC 1 cut(s) 1446
GluI GCNGC 3 cut(s) 185, 807, 908
HaeIII GGCC 5 cut(s) 858, 1114, 1571, 1705, 1913
HapII CCGG 1 cut(s) 1754
HgaI GACGC 1 cut(s) 1425
HhaI GCGC 1 cut(s) 1447
Hin1I GRCGYC 1 cut(s) 1770
Hin6I GCGC 1 cut(s) 1445
HinP1I GCGC 1 cut(s) 1445
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HinfI GANTC 6 cut(s) 510, 541, 824, 1181, 1188, 1528
HpaII CCGG 1 cut(s) 1754
HphI GGTGA 3 cut(s) 173, 550, 1735
Hpy166II GTNNAC 9 cut(s) 339, 481, 865, 890, 974, 1201, 1363, 1480, 1680
Hpy188I TCNGA 9 cut(s) 232, 509, 595, 984, 1098, 1261, 1490, 1717, 1863
Hpy188III TCNNGA 6 cut(s) 395, 545, 938, 1085, 1185, 1192
Hpy8I GTNNAC 9 cut(s) 339, 481, 865, 890, 974, 1201, 1363, 1480, 1680
HpyAV CCTTC 7 cut(s) 39, 95, 406, 839, 1594, 1730, 1845
HpyCH4III ACNGT 6 cut(s) 359, 625, 667, 1484, 1547, 1841
HpyCH4IV ACGT 5 cut(s) 483, 495, 1359, 1770, 1815
HpyF10VI GCNNNNNNNGC 2 cut(s) 443, 855
HpyF3I CTNAG 6 cut(s) 178, 499, 1621, 1700, 1860, 1877
HpySE526I ACGT 5 cut(s) 483, 495, 1359, 1770, 1815
Hsp92I GRCGYC 1 cut(s) 1770
HspAI GCGC 1 cut(s) 1445
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
LmnI GCTCC 2 cut(s) 793, 1603
Lsp1109I GCAGC 2 cut(s) 793, 919
LweI GCATC 4 cut(s) 765, 988, 1225, 1344
MaeI CTAG 2 cut(s) 1512, 1562
MaeII ACGT 5 cut(s) 483, 495, 1359, 1770, 1815
MaeIII GTNAC 5 cut(s) 38, 161, 484, 491, 1454
MalI GATC 5 cut(s) 506, 1023, 1083, 1130, 1134
MboI GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
MflI RGATCY 1 cut(s) 504
MhlI GDGCHC 2 cut(s) 83, 1682
MmeI TCCRAC 2 cut(s) 820, 1284
MroXI GAANNNNTTC 1 cut(s) 416
MslI CAYNNNNRTG 2 cut(s) 584, 1685
MspI CCGG 1 cut(s) 1754
MspR9I CCNGG 1 cut(s) 1754
MwoI GCNNNNNNNGC 2 cut(s) 443, 855
NciI CCSGG 1 cut(s) 1754
NdeII GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
NlaIV GGNNCC 3 cut(s) 565, 1324, 1434
NmuCI GTSAC 4 cut(s) 38, 161, 484, 1454
NspI RCATGY 3 cut(s) 142, 1073, 1732
OliI CACNNNNGTG 1 cut(s) 1685
PacI TTAATTAA 1 cut(s) 462
PaeI GCATGC 1 cut(s) 1732
PaqCI CACCTGC 1 cut(s) 1148
PceI AGGCCT 1 cut(s) 1705
PdmI GAANNNNTTC 1 cut(s) 416
PfeI GAWTC 6 cut(s) 510, 541, 824, 1181, 1188, 1528
PflMI CCANNNNNTGG 1 cut(s) 89
PfoI TCCNGGA 1 cut(s) 1752
PkrI GCNGC 3 cut(s) 186, 808, 909
PshBI ATTAAT 1 cut(s) 458
PspN4I GGNNCC 3 cut(s) 565, 1324, 1434
PspPI GGNCC 3 cut(s) 563, 857, 1569
PsuI RGATCY 1 cut(s) 504
RsaI GTAC 4 cut(s) 1227, 1777, 1818, 1882
RsaNI GTAC 4 cut(s) 1226, 1776, 1817, 1881
RseI CAYNNNNRTG 2 cut(s) 584, 1685
SatI GCNGC 3 cut(s) 185, 807, 908
Sau3AI GATC 5 cut(s) 504, 1021, 1081, 1128, 1132
Sau96I GGNCC 3 cut(s) 563, 857, 1569
ScaI AGTACT 1 cut(s) 1777
ScrFI CCNGG 1 cut(s) 1754
SduI GDGCHC 2 cut(s) 83, 1682
SfaNI GCATC 4 cut(s) 765, 988, 1225, 1344
SinI GGWCC 1 cut(s) 563
SmiMI CAYNNNNRTG 2 cut(s) 584, 1685
SphI GCATGC 1 cut(s) 1732
SseBI AGGCCT 1 cut(s) 1705
SsiI CCGC 5 cut(s) 185, 260, 326, 849, 1238
SspI AATATT 1 cut(s) 119
SspMI CTAG 2 cut(s) 1512, 1562
StuI AGGCCT 1 cut(s) 1705
StyD4I CCNGG 1 cut(s) 1752
StyI CCWWGG 1 cut(s) 1500
TaaI ACNGT 6 cut(s) 359, 625, 667, 1484, 1547, 1841
TaiI ACGT 5 cut(s) 486, 498, 1362, 1773, 1818
TaqI TCGA 6 cut(s) 381, 426, 1131, 1352, 1734, 1844
TatI WGTACW 3 cut(s) 1225, 1775, 1880
TauI GCSGC 1 cut(s) 187
TfiI GAWTC 6 cut(s) 510, 541, 824, 1181, 1188, 1528
TscAI CASTG 4 cut(s) 115, 163, 670, 897
TseFI GTSAC 4 cut(s) 38, 161, 484, 1454
TseI GCWGC 2 cut(s) 806, 907
Tsp45I GTSAC 4 cut(s) 38, 161, 484, 1454
TspDTI ATGAA 8 cut(s) 157, 360, 682, 1056, 1191, 1299, 1644, 1890
TspGWI ACGGA 2 cut(s) 48, 633
TspRI CASTG 4 cut(s) 115, 163, 670, 897
Van91I CCANNNNNTGG 1 cut(s) 89
VneI GTGCAC 1 cut(s) 1678
VpaK11BI GGWCC 1 cut(s) 563
VspI ATTAAT 1 cut(s) 458
XapI RAATTY 7 cut(s) 9, 51, 70, 300, 941, 1343, 1864
XceI RCATGY 3 cut(s) 142, 1073, 1732
XcmI CCANNNNNNNNNTGG 2 cut(s) 1228, 1717
XmiI GTMKAC 1 cut(s) 864
XmnI GAANNNNTTC 1 cut(s) 416
XspI CTAG 2 cut(s) 1512, 1562
ZraI GACGTC 1 cut(s) 1771
ZrmI AGTACT 1 cut(s) 1777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.