Rorug05G0000200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
25194 .. 28456
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0000200.1

Sequence Viewer

Length: 552 bp
ATGAATGCACTTACCCTCTGTAACCATAACCATAATATTTGTATCAATAGCCACCATCATTTCTCAGCGTCGGCGAAGCGCAATTGGCCCAAATTGTTTTCAATTCATCCCAGAAACCTTCGTACAAGTACTAGGCCTTCGTCTCTGGTAATCGAGACGGTGGAAGGCCAAGTTGCCGCTGATTCTGAGCAAACTCCTTCATCTGTTGCTCGTCGTCTCATTCTGCTTCGTCATGCCAAGAGTTCCTGGGAAGACCCCTCGCTGAAAGATCATGATCGACCCCTGAATGCAAAAGGACAAGCCGATGCTGTCGAAATCTCTCACAAGCTTCAACAGTTGGGCTGGATTCCTCAGCTTATTTTATCCAGCAATGCAGTGCGAACCAGGGAGACTCTTACCATAATGCAGCAACAAGTGAGGGGCTTCTTGGAAGCTGAGGTCCATTACTTTTCCAGCTTTTATTCCATTGCGGCCATGGATGGGCAGACTGCTGAGCACCTTCAACATATTATCTGTAACTATTCAAGGGATGACATACTCACCGTCATGTAA

Protein Analysis

183

Amino Acids

20.74

Weight (kDa)

7.87

Isoelectric Point (pI)

56.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 73 - 140 3e-07 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 177, 470
AcoI YGGCCR 1 cut(s) 471
AfaI GTAC 2 cut(s) 124, 130
AfiI CCNNNNNNNGG 1 cut(s) 480
AgsI TTSAA 4 cut(s) 102, 332, 503, 525
AjnI CCWGG 2 cut(s) 245, 383
AluBI AGCT 4 cut(s) 328, 355, 434, 456
AluI AGCT 4 cut(s) 328, 355, 434, 456
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 4 cut(s) 147, 149, 221, 383
AoxI GGCC 4 cut(s) 86, 134, 166, 471
ApeKI GCWGC 1 cut(s) 406
AspLEI GCGC 1 cut(s) 81
AspS9I GGNCC 2 cut(s) 87, 439
AsuHPI GGTGA 1 cut(s) 532
AvaII GGWCC 1 cut(s) 439
BarI GAAGNNNNNNTAC 2 cut(s) 121, 153
BbsI GAAGAC 1 cut(s) 258
Bbv12I GWGCWC 1 cut(s) 498
BbvCI CCTCAGC 2 cut(s) 351, 435
BbvI GCAGC 1 cut(s) 418
BccI CCATC 2 cut(s) 63, 473
BciT130I CCWGG 2 cut(s) 247, 385
BcoDI GTCTC 4 cut(s) 147, 149, 221, 383
BfaI CTAG 1 cut(s) 132
BisI GCNGC 3 cut(s) 177, 407, 471
BlpI GCTNAGC 1 cut(s) 492
BlsI GCNGC 3 cut(s) 178, 408, 472
BmcAI AGTACT 1 cut(s) 130
Bme1390I CCNGG 2 cut(s) 247, 385
Bme18I GGWCC 1 cut(s) 439
BmgT120I GGNCC 2 cut(s) 87, 439
BmrFI CCNGG 2 cut(s) 247, 385
BmsI GCATC 1 cut(s) 295
BpiI GAAGAC 1 cut(s) 258
Bpu10I CCTNAGC 2 cut(s) 351, 435
Bpu1102I GCTNAGC 1 cut(s) 492
BsaBI GATNNNNATC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 246, 384, 474
Bsc4I CCNNNNNNNGG 1 cut(s) 480
Bse3DI GCAATG 2 cut(s) 376, 465
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 2 cut(s) 247, 385
BseDI CCNNGG 3 cut(s) 246, 384, 474
BseGI GGATG 3 cut(s) 106, 484, 535
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 1 cut(s) 480
BseMI GCAATG 2 cut(s) 376, 465
BseMII CTCAG 5 cut(s) 78, 177, 365, 426, 483
BseXI GCAGC 1 cut(s) 418
BshFI GGCC 4 cut(s) 88, 136, 168, 473
BsiHKAI GWGCWC 1 cut(s) 498
BslI CCNNNNNNNGG 1 cut(s) 480
BsmAI GTCTC 4 cut(s) 147, 149, 221, 383
BsmBI CGTCTC 3 cut(s) 147, 149, 221
BsmI GAATGC 2 cut(s) 10, 292
BsnI GGCC 4 cut(s) 88, 136, 168, 473
Bsp1286I GDGCHC 1 cut(s) 498
Bsp143I GATC 2 cut(s) 268, 274
Bsp1720I GCTNAGC 1 cut(s) 492
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 2 cut(s) 177, 470
BspANI GGCC 4 cut(s) 88, 136, 168, 473
BspCNI CTCAG 5 cut(s) 77, 178, 364, 427, 484
BspHI TCATGA 1 cut(s) 271
BsrDI GCAATG 2 cut(s) 376, 465
BssECI CCNNGG 3 cut(s) 246, 384, 474
BssMI GATC 2 cut(s) 268, 274
BssT1I CCWWGG 1 cut(s) 474
Bst2UI CCWGG 2 cut(s) 247, 385
Bst4CI ACNGT 3 cut(s) 160, 336, 544
BstDEI CTNAG 5 cut(s) 64, 186, 351, 435, 492
BstDSI CCRYGG 1 cut(s) 474
BstF5I GGATG 3 cut(s) 106, 484, 535
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 2 cut(s) 271, 277
BstMAI GTCTC 4 cut(s) 147, 149, 221, 383
BstMBI GATC 2 cut(s) 268, 274
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNI CCWGG 2 cut(s) 247, 385
BstSCI CCNGG 2 cut(s) 245, 383
BstV1I GCAGC 1 cut(s) 418
BstV2I GAAGAC 1 cut(s) 258
BsuRI GGCC 4 cut(s) 88, 136, 168, 473
BtgI CCRYGG 1 cut(s) 474
BtsCI GGATG 3 cut(s) 106, 484, 535
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 1 cut(s) 381
CciI TCATGA 1 cut(s) 271
CfoI GCGC 1 cut(s) 81
Cfr13I GGNCC 2 cut(s) 87, 439
CseI GACGC 1 cut(s) 57
Csp6I GTAC 2 cut(s) 123, 129
CviAII CATG 4 cut(s) 233, 272, 475, 547
CviQI GTAC 2 cut(s) 123, 129
DdeI CTNAG 5 cut(s) 64, 186, 351, 435, 492
DpnI GATC 2 cut(s) 270, 276
DpnII GATC 2 cut(s) 268, 274
EaeI YGGCCR 1 cut(s) 471
Eco130I CCWWGG 1 cut(s) 474
Eco147I AGGCCT 1 cut(s) 136
Eco47I GGWCC 1 cut(s) 439
EcoRII CCWGG 2 cut(s) 245, 383
EcoT14I CCWWGG 1 cut(s) 474
ErhI CCWWGG 1 cut(s) 474
Esp3I CGTCTC 3 cut(s) 147, 149, 221
FaeI CATG 4 cut(s) 236, 275, 478, 550
FaiI YATR 9 cut(s) 27, 33, 234, 273, 401, 476, 507, 536, 548
FatI CATG 4 cut(s) 232, 271, 474, 546
Fnu4HI GCNGC 3 cut(s) 177, 407, 471
FokI GGATG 3 cut(s) 93, 491, 542
Fsp4HI GCNGC 3 cut(s) 177, 407, 471
FspBI CTAG 1 cut(s) 132
GlaI GCGC 1 cut(s) 80
GluI GCNGC 3 cut(s) 177, 407, 471
HaeIII GGCC 4 cut(s) 88, 136, 168, 473
HgaI GACGC 1 cut(s) 57
HhaI GCGC 1 cut(s) 81
Hin1II CATG 4 cut(s) 236, 275, 478, 550
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 3 cut(s) 182, 346, 391
HphI GGTGA 1 cut(s) 532
Hpy188I TCNGA 1 cut(s) 187
Hpy188III TCNNGA 2 cut(s) 154, 272
Hpy99I CGWCG 2 cut(s) 73, 216
HpyAV CCTTC 5 cut(s) 128, 147, 158, 207, 509
HpyCH4III ACNGT 3 cut(s) 160, 336, 544
HpyCH4V TGCA 4 cut(s) 8, 290, 374, 406
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 5 cut(s) 64, 186, 351, 435, 492
Hsp92II CATG 4 cut(s) 236, 275, 478, 550
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 2 cut(s) 268, 274
Lsp1109I GCAGC 1 cut(s) 418
LweI GCATC 1 cut(s) 295
MaeI CTAG 1 cut(s) 132
MaeIII GTNAC 2 cut(s) 20, 515
MalI GATC 2 cut(s) 270, 276
MboI GATC 2 cut(s) 268, 274
MboII GAAGA 1 cut(s) 263
MfeI CAATTG 1 cut(s) 82
MhlI GDGCHC 1 cut(s) 498
MluCI AATT 3 cut(s) 82, 92, 102
MlyI GAGTC 1 cut(s) 385
MnlI CCTC 5 cut(s) 26, 268, 360, 411, 430
MslI CAYNNNNRTG 1 cut(s) 545
MspA1I CMGCKG 1 cut(s) 179
MspR9I CCNGG 2 cut(s) 247, 385
MunI CAATTG 1 cut(s) 82
Mva1269I GAATGC 2 cut(s) 10, 292
MvaI CCWGG 2 cut(s) 247, 385
MwoI GCNNNNNNNGC 1 cut(s) 85
NcoI CCATGG 1 cut(s) 474
NdeII GATC 2 cut(s) 268, 274
NlaIII CATG 4 cut(s) 236, 275, 478, 550
PagI TCATGA 1 cut(s) 271
PceI AGGCCT 1 cut(s) 136
PctI GAATGC 2 cut(s) 10, 292
PfeI GAWTC 2 cut(s) 182, 346
PkrI GCNGC 3 cut(s) 178, 408, 472
PleI GAGTC 1 cut(s) 385
PpsI GAGTC 1 cut(s) 385
Psp6I CCWGG 2 cut(s) 245, 383
PspGI CCWGG 2 cut(s) 245, 383
PspPI GGNCC 2 cut(s) 87, 439
RsaI GTAC 2 cut(s) 124, 130
RsaNI GTAC 2 cut(s) 123, 129
RseI CAYNNNNRTG 1 cut(s) 545
SatI GCNGC 3 cut(s) 177, 407, 471
Sau3AI GATC 2 cut(s) 268, 274
Sau96I GGNCC 2 cut(s) 87, 439
ScaI AGTACT 1 cut(s) 130
SchI GAGTC 1 cut(s) 385
ScrFI CCNGG 2 cut(s) 247, 385
SduI GDGCHC 1 cut(s) 498
SetI ASST 7 cut(s) 120, 330, 357, 436, 441, 458, 501
SfaNI GCATC 1 cut(s) 295
SinI GGWCC 1 cut(s) 439
SmiMI CAYNNNNRTG 1 cut(s) 545
Sse9I AATT 3 cut(s) 82, 92, 102
SseBI AGGCCT 1 cut(s) 136
SsiI CCGC 2 cut(s) 177, 470
SspI AATATT 1 cut(s) 37
SspMI CTAG 1 cut(s) 132
StuI AGGCCT 1 cut(s) 136
StyD4I CCNGG 2 cut(s) 245, 383
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 3 cut(s) 160, 336, 544
TaqI TCGA 3 cut(s) 153, 277, 312
TasI AATT 3 cut(s) 82, 92, 102
TatI WGTACW 1 cut(s) 128
TauI GCSGC 2 cut(s) 179, 473
TfiI GAWTC 2 cut(s) 182, 346
TscAI CASTG 1 cut(s) 381
TseI GCWGC 1 cut(s) 406
TspDTI ATGAA 3 cut(s) 17, 95, 189
TspRI CASTG 1 cut(s) 381
VpaK11BI GGWCC 1 cut(s) 439
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XspI CTAG 1 cut(s) 132
ZrmI AGTACT 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.