Rmu_sc0001608.1_g000041

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001608.1
Physical Location & Seq
Reverse (-)
194883 .. 197835
2953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001608.1_g000041.1.cds

Sequence Viewer

Length: 795 bp
atgagatggatgaaggaattggtgactaaggaaaatggagaggaaatggtgagacaagaagatgaaatggatgaaggaatgtatgtgggaaaatggaaaggaaatggagagacaaagaagatggaatggatgaaggaattggtgactaaggaaaatggaaaggaaatggagagacaaggagatgaaatggatgaaggaatgtgttttagaatgagaggagaagatttgaagggtgtggacctgcagactggcaaatttaccttgaggcaaatcaaaactgccacaaacaactttgacatagcgaacaagattggagaaggtggttttggtcctgtttacaggggccttctatcagacaacactgcaattgctgttaagaagctttcagccaaatcgaagcaagggaatcgtgaatttgtgaatgagataggcatgatttctgctttgcaacaccctcaccttgtcaagctttatggatgctgtattgaaggaaataacttgttgcttgtctatgagtacatggaaaacaatagtcttgcacgtgctctatttggcccaaaagaaaatcaggtgaagttggactggccaacaaggcataggatttgtgttggtatagccagaggtttggcttacctccatgaggaatcaaggttgaagatcgttcatagagacatcaaagctactaatgtgctacttgataaaaatcttttcccaaagatatctgactttggattggccaagcttgatgaagacgataatacccacataagcactcggattgctggaactttgtga

Protein Analysis

264

Amino Acids

30.09

Weight (kDa)

6.62

Isoelectric Point (pI)

18.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 249
AcoI YGGCCR 2 cut(s) 584, 735
AcsI RAATTY 2 cut(s) 254, 413
AcvI CACGTG 1 cut(s) 542
AfaI GTAC 1 cut(s) 518
AfiI CCNNNNNNNGG 1 cut(s) 640
AgsI TTSAA 3 cut(s) 229, 488, 655
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
AluBI AGCT 4 cut(s) 382, 469, 680, 742
AluI AGCT 4 cut(s) 382, 469, 680, 742
Alw21I GWGCWC 1 cut(s) 547
Alw26I GTCTC 4 cut(s) 46, 104, 166, 663
AoxI GGCC 4 cut(s) 343, 553, 584, 735
ApoI RAATTY 2 cut(s) 254, 413
AspS9I GGNCC 4 cut(s) 238, 329, 343, 554
AsuHPI GGTGA 5 cut(s) 34, 61, 154, 449, 583
AvaII GGWCC 2 cut(s) 238, 329
BalI TGGCCA 2 cut(s) 586, 737
BbrPI CACGTG 1 cut(s) 542
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 1 cut(s) 547
BccI CCATC 1 cut(s) 115
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BcoDI GTCTC 4 cut(s) 46, 104, 166, 663
BfmI CTRYAG 1 cut(s) 242
BfuAI ACCTGC 1 cut(s) 249
BglI GCCNNNNNGGC 1 cut(s) 592
Bme18I GGWCC 2 cut(s) 238, 329
BmgT120I GGNCC 4 cut(s) 238, 329, 343, 554
BmiI GGNNCC 1 cut(s) 344
BmsI GCATC 1 cut(s) 467
BpiI GAAGAC 1 cut(s) 756
BpuEI CTTGAG 1 cut(s) 283
BsaAI YACGTR 1 cut(s) 542
BsaBI GATNNNNATC 1 cut(s) 702
Bsc4I CCNNNNNNNGG 1 cut(s) 640
Bse1I ACTGG 2 cut(s) 253, 587
Bse8I GATNNNNATC 1 cut(s) 702
BseGI GGATG 5 cut(s) 15, 76, 135, 196, 482
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 1 cut(s) 640
BseNI ACTGG 2 cut(s) 253, 587
BseRI GAGGAG 1 cut(s) 231
BshFI GGCC 4 cut(s) 345, 555, 586, 737
BsiHKAI GWGCWC 1 cut(s) 547
BslI CCNNNNNNNGG 1 cut(s) 640
BsmAI GTCTC 4 cut(s) 46, 104, 166, 663
BsnI GGCC 4 cut(s) 345, 555, 586, 737
Bsp1286I GDGCHC 1 cut(s) 547
Bsp143I GATC 1 cut(s) 657
BspANI GGCC 4 cut(s) 345, 555, 586, 737
BspLI GGNNCC 1 cut(s) 344
BspMAI CTGCAG 1 cut(s) 246
BspMI ACCTGC 1 cut(s) 249
BsrI ACTGG 2 cut(s) 253, 587
BssMI GATC 1 cut(s) 657
BstBAI YACGTR 1 cut(s) 542
BstDEI CTNAG 2 cut(s) 27, 147
BstENI CCTNNNNNAGG 1 cut(s) 638
BstF5I GGATG 5 cut(s) 15, 76, 135, 196, 482
BstKTI GATC 1 cut(s) 660
BstMAI GTCTC 4 cut(s) 46, 104, 166, 663
BstMBI GATC 1 cut(s) 657
BstMWI GCNNNNNNNGC 1 cut(s) 592
BstSFI CTRYAG 1 cut(s) 242
BstV2I GAAGAC 1 cut(s) 756
BstXI CCANNNNNNTGG 1 cut(s) 625
BsuRI GGCC 4 cut(s) 345, 555, 586, 737
BtsCI GGATG 5 cut(s) 15, 76, 135, 196, 482
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 1 cut(s) 360
BveI ACCTGC 1 cut(s) 249
Cfr13I GGNCC 4 cut(s) 238, 329, 343, 554
Csp6I GTAC 1 cut(s) 517
CviAII CATG 3 cut(s) 433, 520, 638
CviQI GTAC 1 cut(s) 517
DdeI CTNAG 2 cut(s) 27, 147
DpnI GATC 1 cut(s) 659
DpnII GATC 1 cut(s) 657
EaeI YGGCCR 2 cut(s) 584, 735
Eco32I GATATC 1 cut(s) 720
Eco47I GGWCC 2 cut(s) 238, 329
Eco72I CACGTG 1 cut(s) 542
EcoNI CCTNNNNNAGG 1 cut(s) 638
EcoO109I RGGNCCY 1 cut(s) 343
EcoRV GATATC 1 cut(s) 720
FaeI CATG 3 cut(s) 436, 523, 641
FatI CATG 3 cut(s) 432, 519, 637
FokI GGATG 5 cut(s) 22, 83, 142, 203, 489
HaeIII GGCC 4 cut(s) 345, 555, 586, 737
Hin1II CATG 3 cut(s) 436, 523, 641
HindIII AAGCTT 3 cut(s) 380, 467, 740
HinfI GANTC 2 cut(s) 406, 644
HphI GGTGA 5 cut(s) 34, 61, 154, 449, 583
Hpy166II GTNNAC 2 cut(s) 238, 337
Hpy188I TCNGA 3 cut(s) 355, 724, 777
Hpy188III TCNNGA 1 cut(s) 410
Hpy8I GTNNAC 2 cut(s) 238, 337
HpyAV CCTTC 8 cut(s) 7, 68, 127, 188, 223, 311, 356, 482
HpyCH4IV ACGT 1 cut(s) 541
HpyCH4V TGCA 4 cut(s) 244, 365, 448, 539
HpyF10VI GCNNNNNNNGC 1 cut(s) 592
HpyF3I CTNAG 2 cut(s) 27, 147
HpySE526I ACGT 1 cut(s) 541
Hsp92II CATG 3 cut(s) 436, 523, 641
Kzo9I GATC 1 cut(s) 657
LpnPI CCDG 8 cut(s) 234, 254, 325, 345, 554, 568, 631, 768
LweI GCATC 1 cut(s) 467
MaeII ACGT 1 cut(s) 541
MaeIII GTNAC 2 cut(s) 22, 142
MalI GATC 1 cut(s) 659
MboI GATC 1 cut(s) 657
MboII GAAGA 5 cut(s) 71, 130, 233, 667, 761
MfeI CAATTG 1 cut(s) 366
MhlI GDGCHC 1 cut(s) 547
MlsI TGGCCA 2 cut(s) 586, 737
MluCI AATT 5 cut(s) 17, 137, 254, 366, 413
MluNI TGGCCA 2 cut(s) 586, 737
MmeI TCCRAC 1 cut(s) 558
MnlI CCTC 7 cut(s) 34, 209, 258, 465, 614, 634, 644
Mox20I TGGCCA 2 cut(s) 586, 737
MscI TGGCCA 2 cut(s) 586, 737
MseI TTAA 1 cut(s) 375
Msp20I TGGCCA 2 cut(s) 586, 737
MunI CAATTG 1 cut(s) 366
MwoI GCNNNNNNNGC 1 cut(s) 592
NdeII GATC 1 cut(s) 657
NlaIII CATG 3 cut(s) 436, 523, 641
NlaIV GGNNCC 1 cut(s) 344
NmuCI GTSAC 2 cut(s) 22, 142
PfeI GAWTC 2 cut(s) 406, 644
PmaCI CACGTG 1 cut(s) 542
PmlI CACGTG 1 cut(s) 542
Ppu21I YACGTR 1 cut(s) 542
PspCI CACGTG 1 cut(s) 542
PspN4I GGNNCC 1 cut(s) 344
PspPI GGNCC 4 cut(s) 238, 329, 343, 554
PstI CTGCAG 1 cut(s) 246
RsaI GTAC 1 cut(s) 518
RsaNI GTAC 1 cut(s) 517
SaqAI TTAA 1 cut(s) 375
Sau3AI GATC 1 cut(s) 657
Sau96I GGNCC 4 cut(s) 238, 329, 343, 554
SduI GDGCHC 1 cut(s) 547
SfaNI GCATC 1 cut(s) 467
SfcI CTRYAG 1 cut(s) 242
SinI GGWCC 2 cut(s) 238, 329
SmlI CTYRAG 1 cut(s) 262
SmoI CTYRAG 1 cut(s) 262
Sse9I AATT 5 cut(s) 17, 137, 254, 366, 413
TaiI ACGT 1 cut(s) 544
TaqI TCGA 1 cut(s) 395
TasI AATT 5 cut(s) 17, 137, 254, 366, 413
TatI WGTACW 1 cut(s) 516
TfiI GAWTC 2 cut(s) 406, 644
Tru1I TTAA 1 cut(s) 375
Tru9I TTAA 1 cut(s) 375
TscAI CASTG 1 cut(s) 367
TseFI GTSAC 2 cut(s) 22, 142
Tsp45I GTSAC 2 cut(s) 22, 142
TspDTI ATGAA 8 cut(s) 26, 78, 87, 146, 198, 207, 653, 762
TspRI CASTG 1 cut(s) 367
VpaK11BI GGWCC 2 cut(s) 238, 329
XagI CCTNNNNNAGG 1 cut(s) 638
XapI RAATTY 2 cut(s) 254, 413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.