FvH4_3g06801

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
3931261 .. 3937609
6349 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g06801.t1

Sequence Viewer

Length: 3003 bp
ATGGTAAGAATGTATAGGAACAATCCAGTGGAGATGGTCATCTTTTTCATGGTGGTCATATGCATGGCACAAATCACATTTGAAGCAGAGGCCATGTCTCTTCCAGCTGATGAGGTGCAAGCCCTTCAAGAAATTGCTGAGCAACTGAACAAAAAGGATTGGAATTTGAGCGACCCATGTAGAAATGTTCCAACTTTCTCAATCCCACATGCGGATCAGTACTACAATACCCTCTTCTGCAACTGTTCCTTCTCCGGCAATGTGTGCCATGTCCAAACCATTTATCTTGTGGGTCAGGACCTGGATGGTGTGCTTCCACCATCACTGGTGAAGCTACCTTACCTTAAGGAACTTAATTTGGGTCAGAATTACCTTAGTGGCACGATTCCACCAGAATGGGGTTCTACCAAGTTGGAATTTCTGGTTCTCAGTGTGAACAACTTATCAGGACCTATCCCTGCCTTTTTGGGGAACATAACTACTCTCCGATCTTTGGCCTTGGAAAGTAATCAATTTTCTGGAAATATTCCACCGGAGTTGGGAAGATTGGTTAACATGGAAGTCCTCTATCTTCGAGCTAACAATCTCATTGGACAGTTGCCTGTGACTCTCACAAATATGACCAAATTAAATACACTTTGGATTGGCAGTAACAACTTCACTGGAAAAATACCGAACTATTTTCTTAGTTGGAAAGAACTTCAGATGTTAGAAATGCAAGCAAGTGGCTTTGAAGGGCCAATTCCCTCTAGTCTTTCTGCCTTAAGTAATATGACATACCTAGTTATCAGTGACATGAACGGAGAGAGCTCAGTTTTTCCGAACTTGTCAAACATGAAAAACATGCAGAAATTGATGTTAAGGAGCTGCAATATAACAGGATCAATTCCAGAATATATCTCTAACATGACAAGCCTCCAAGTTTTAGATCTTAGCTTCAACAGATTGGAAGGGAGCATCCCGAATCTTGACAACTTAATAAGATTGGCCACAATATATCTGACAAGTAACTGGCTTACTGGGCTTCCGGAGTGGATCAAAAGTAGAGATAGCCGTTACATAATAGATCTTTCTTACAACAACTTTTCAAGGGACTCTGTCCCAACTACATGTCGAGAAACCTTTAACGTGTTCAGAAGTTTCTCTAGACCGAACAACTCAATTCTCTGCAACTGCCTCTATCCATGTTCAAAAGAACAGTATTCATTGCATATAAATTGTGGTGGAAAACCAATCACCATTGGAAGCATCAAGTATGAGGGGGATGAAGCTTCAGGAGGTGCAGCAAAGTTTTTTCAAGACACAGTTAATTGGGGATTTAGTAGCACTGGTGATTATGGGGTTATGAATGTTGACCAAGCCTACATAGCAAACAATATTTCCATACTCAAAATGAACAACTCCGAATTGTACAGAACTGCCCGTCTTTCTTTTCTTTCACTCACATATTATGCCCGTTGCTTAGCGAATGGAAATTACACTGTGAAACTACACTTTGCAGAAATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAACACGATTTTTTGATGTCTATATCCAGGAAAAACTGGTATTGAAGGATTTTAATATTGAAAAGGAAGCACAAGGGGTTGATAAGGAAGTAATTAAAGTATTTAAAGCAGTTGTCAATGTTAGCACTTTAGAGATTCGTTTTTATTGGGCTGGGAAAGGGACAACTAATTCCCCAAGGAGAGGGACATTTGGTTCTCTCATATCAGCTATCTCAGTTGAGTCTGATTTCAAGCCGCCTGGTGATAGCAACAGGATAATGTTCATAGTGATTGGAGTTGCTTTAGTCTTGTGCCTTATCTTCATGGTTTTTGGCATTCTTTGGTTGAGAAGCTTCTTTGGAGGCAAGACCTCAAGGGAACAAGAGCTGAAAGGATTAGATCTGCAAACTGGTCTTTTTAGATTCAAACAAATCAAAGCTGCCACTAACAACTTTGATGCTGCAAACAAGCTTGGGGAAGGTGGCTTTGGAATTGTTTATAAGGGGGAATTATCAGATGGTACCACTATTGCTGTCAAGCAGCTTTCATCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAATGAAATAGGGATGATTTCTGGTTTGCAACATCCAAACCTTGTTAGATTGTATGGATGTTGCATCGAAGGAAATCAGTTGTTGTTGGTATATGAATATATGGAGAACAATAGTCTTGCACATTACTTGTTCGGTCCACAAGAAGGTAAACTGAAACTGGACTGGCATAAAAGGCAAAAAATATGTATTGGCATTGCAAGAGGGTTAGCTTTCCTACATGAGGAGTCAACGCTGAAAATTGTTCATAGAGACATCAAAATGACTAATATATTGCTAGACAAGGACCTTAATCCTAAAATCTCAGACTTTGGTTTGGCCAAGCTGGACGAAGAGGAGAAGACGCATATTAGCACCAGAATAGCTGGAACTATAGGATACATGGCGCCAGAATATGCGCTATGGGGTTACTTAACTGATAAAGTAGATGTTTACAGTTTTGGAGTTGTTGCCCTAGAGTTGGTATCTGGCAAAAACATCAAATTTCGGTCCAATGAGAATTATGTATGCCTTCTAGATTGGGCCCTTATTTTGCAACAAAAAGAAAACCTGATGGAGCTAGTGGATCCGAAGTTGGGATCCAAGTTCAACAAGGAACAGGCAATGAGAATGATCAAAGTAGCTCTACTATGCACCAACCCATCTCCAGCATTAAGACCTACAATGTCTGCAGCACTAAGCATGCTTGAAGGTCGAGCTGTTATTCATGAATCAAGTAGAAACCTGAGTATGTATGGTGATGAACTGGGATCTATGGCCTCAAGAGATGACTCTAATGATCTGAATATTCAGCATAGCCCAAGTGAGACTCGGAGCCTCATATACTTATCAGATGCCAAAGGACCAGAGGCCTCTTCCTCAAGGACCATCCACGATAACTATACATTTAATCTTGAATCCCCATAG

Protein Analysis

1001

Amino Acids

112.14

Weight (kDa)

6.42

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 155 - 348 1.9e-11 Leucine-rich repeat region
LRR_4 PF12799 280 - 325 6.8e-06 Leucine Rich repeats (2 copies)
Malectin PF11721 402 - 584 7.4e-35 Malectin domain
Pkinase PF00069 660 - 926 3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 661 - 926 4.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2019
Acc65I GGTACC 1 cut(s) 2039
AccB1I GGYRCC 2 cut(s) 2039, 2482
AccIII TCCGGA 1 cut(s) 1027
AciI CCGC 2 cut(s) 212, 1775
AclWI GGATC 8 cut(s) 222, 889, 1043, 2657, 2670, 2670, 2683, 2854
AcoI YGGCCR 2 cut(s) 987, 2415
AcsI RAATTY 3 cut(s) 163, 416, 2579
AcuI CTGAAG 2 cut(s) 686, 1257
AcyI GRCGYC 1 cut(s) 2483
AfaI GTAC 3 cut(s) 221, 1412, 2041
AflII CTTAAG 2 cut(s) 344, 763
AflIII ACRYGT 2 cut(s) 1109, 1128
AhdI GACNNNNNGTC 1 cut(s) 1522
AjnI CCWGG 3 cut(s) 300, 1566, 1777
AjuI GAANNNNNNNTTGG 2 cut(s) 1989, 2021
AloI GAACNNNNNNTCC 2 cut(s) 1717, 1749
Alw21I GWGCWC 1 cut(s) 812
Alw26I GTCTC 4 cut(s) 102, 1509, 2343, 2897
AlwI GGATC 8 cut(s) 222, 889, 1043, 2657, 2670, 2670, 2683, 2854
AlwNI CAGNNNCTG 1 cut(s) 301
Aor13HI TCCGGA 1 cut(s) 1027
AoxI GGCC 8 cut(s) 90, 495, 737, 987, 2415, 2619, 2853, 2946
ApaI GGGCCC 1 cut(s) 2623
ApeKI GCWGC 6 cut(s) 867, 1283, 1958, 1979, 2059, 2768
ApoI RAATTY 3 cut(s) 163, 416, 2579
Asp700I GAANNNNTTC 1 cut(s) 1506
Asp718I GGTACC 1 cut(s) 2039
AspLEI GCGC 2 cut(s) 2485, 2497
AsuHPI GGTGA 5 cut(s) 340, 1228, 1343, 1793, 2846
AvaII GGWCC 7 cut(s) 298, 449, 2234, 2383, 2586, 2939, 2961
BaeGI GKGCMC 1 cut(s) 2623
BalI TGGCCA 2 cut(s) 989, 2417
BamHI GGATCC 2 cut(s) 2662, 2675
BanI GGYRCC 2 cut(s) 2039, 2482
BanII GRGCYC 2 cut(s) 812, 2623
BarI GAAGNNNNNNTAC 2 cut(s) 323, 355
BbsI GAAGAC 1 cut(s) 2444
Bbv12I GWGCWC 1 cut(s) 812
BbvI GCAGC 6 cut(s) 854, 1295, 1945, 1966, 2071, 2780
BccI CCATC 7 cut(s) 28, 299, 328, 2030, 2644, 2746, 2972
BceAI ACGGC 1 cut(s) 1038
BciT130I CCWGG 3 cut(s) 302, 1568, 1779
BciVI GTATCC 1 cut(s) 2468
BclI TGATCA 1 cut(s) 2709
BcoDI GTCTC 4 cut(s) 102, 1509, 2343, 2897
BfaI CTAG 7 cut(s) 750, 782, 1146, 2375, 2552, 2612, 2657
BfmI CTRYAG 2 cut(s) 2469, 2766
BfoI RGCGCY 1 cut(s) 2486
BfrI CTTAAG 2 cut(s) 344, 763
BfuI GTATCC 1 cut(s) 2468
BglII AGATCT 3 cut(s) 928, 1066, 1918
BisI GCNGC 7 cut(s) 868, 1284, 1775, 1959, 1980, 2060, 2769
BlpI GCTNAGC 2 cut(s) 138, 1462
BlsI GCNGC 7 cut(s) 869, 1285, 1776, 1960, 1981, 2061, 2770
BmcAI AGTACT 1 cut(s) 221
Bme1390I CCNGG 3 cut(s) 302, 1568, 1779
Bme18I GGWCC 7 cut(s) 298, 449, 2234, 2383, 2586, 2939, 2961
BmeRI GACNNNNNGTC 1 cut(s) 1522
BmiI GGNNCC 6 cut(s) 2041, 2484, 2621, 2664, 2677, 2912
BmrFI CCNGG 3 cut(s) 302, 1568, 1779
BmrI ACTGGG 2 cut(s) 1029, 2852
BmsI GCATC 5 cut(s) 966, 1257, 1966, 2172, 2920
BmuI ACTGGG 2 cut(s) 1029, 2852
BpiI GAAGAC 1 cut(s) 2444
BpmI CTGGAG 1 cut(s) 2727
Bpu1102I GCTNAGC 2 cut(s) 138, 1462
BpuEI CTTGAG 3 cut(s) 1876, 2842, 2941
BsaBI GATNNNNATC 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 2483
BsaJI CCNNGG 2 cut(s) 498, 1715
BsaWI WCCGGW 2 cut(s) 532, 1027
Bse3DI GCAATG 4 cut(s) 265, 1205, 2292, 2706
Bse8I GATNNNNATC 1 cut(s) 38
BseAI TCCGGA 1 cut(s) 1027
BseBI CCWGG 3 cut(s) 302, 1568, 1779
BseDI CCNNGG 2 cut(s) 498, 1715
BseGI GGATG 7 cut(s) 310, 957, 1270, 2118, 2131, 2162, 2964
BseJI GATNNNNATC 1 cut(s) 38
BseMI GCAATG 4 cut(s) 265, 1205, 2292, 2706
BseMII CTCAG 7 cut(s) 129, 442, 825, 1525, 1767, 2415, 2813
BseRI GAGGAG 2 cut(s) 2336, 2447
BseSI GKGCMC 1 cut(s) 2623
BseXI GCAGC 6 cut(s) 854, 1295, 1945, 1966, 2071, 2780
BseYI CCCAGC 1 cut(s) 1691
BsgI GTGCAG 1 cut(s) 1302
BshFI GGCC 8 cut(s) 92, 497, 739, 989, 2417, 2621, 2855, 2948
BshNI GGYRCC 2 cut(s) 2039, 2482
BsiHKAI GWGCWC 1 cut(s) 812
BsiSI CCGG 3 cut(s) 255, 533, 1028
BslFI GGGAC 4 cut(s) 1085, 1106, 1714, 1738
BsmAI GTCTC 4 cut(s) 102, 1509, 2343, 2897
BsmFI GGGAC 4 cut(s) 1085, 1106, 1714, 1738
BsmI GAATGC 1 cut(s) 1854
BsnI GGCC 8 cut(s) 92, 497, 739, 989, 2417, 2621, 2855, 2948
Bsp120I GGGCCC 1 cut(s) 2619
Bsp1286I GDGCHC 2 cut(s) 812, 2623
Bsp13I TCCGGA 1 cut(s) 1027
Bsp1407I TGTACA 1 cut(s) 1410
Bsp1720I GCTNAGC 2 cut(s) 138, 1462
BspACI CCGC 2 cut(s) 212, 1775
BspANI GGCC 8 cut(s) 92, 497, 739, 989, 2417, 2621, 2855, 2948
BspCNI CTCAG 7 cut(s) 130, 441, 824, 1524, 1766, 2414, 2814
BspEI TCCGGA 1 cut(s) 1027
BspHI TCATGA 1 cut(s) 2803
BspLI GGNNCC 6 cut(s) 2041, 2484, 2621, 2664, 2677, 2912
BspMAI CTGCAG 1 cut(s) 2770
BspPI GGATC 8 cut(s) 222, 889, 1043, 2657, 2670, 2670, 2683, 2854
BspT107I GGYRCC 2 cut(s) 2039, 2482
BspTI CTTAAG 2 cut(s) 344, 763
BsrDI GCAATG 4 cut(s) 265, 1205, 2292, 2706
BsrGI TGTACA 1 cut(s) 1410
BssECI CCNNGG 2 cut(s) 498, 1715
BssNI GRCGYC 1 cut(s) 2483
BssT1I CCWWGG 2 cut(s) 498, 1715
Bst2UI CCWGG 3 cut(s) 302, 1568, 1779
Bst4CI ACNGT 6 cut(s) 245, 597, 1200, 1306, 1483, 2534
Bst6I CTCTTC 4 cut(s) 105, 239, 2424, 2956
BstACI GRCGYC 1 cut(s) 2483
BstAFI CTTAAG 2 cut(s) 344, 763
BstAPI GCANNNNNTGC 1 cut(s) 264
BstAUI TGTACA 1 cut(s) 1410
BstC8I GCNNGC 3 cut(s) 120, 720, 2780
BstENI CCTNNNNNAGG 1 cut(s) 2318
BstF5I GGATG 7 cut(s) 310, 957, 1270, 2118, 2131, 2162, 2964
BstH2I RGCGCY 1 cut(s) 2486
BstHHI GCGC 2 cut(s) 2485, 2497
BstMAI GTCTC 4 cut(s) 102, 1509, 2343, 2897
BstMWI GCNNNNNNNGC 4 cut(s) 264, 1021, 1367, 2272
BstNI CCWGG 3 cut(s) 302, 1568, 1779
BstNSI RCATGY 4 cut(s) 212, 847, 1113, 2782
BstSCI CCNGG 3 cut(s) 300, 1566, 1777
BstSFI CTRYAG 2 cut(s) 2469, 2766
BstSLI GKGCMC 1 cut(s) 2623
BstV1I GCAGC 6 cut(s) 854, 1295, 1945, 1966, 2071, 2780
BstV2I GAAGAC 1 cut(s) 2444
BstX2I RGATCY 6 cut(s) 928, 1066, 1918, 2662, 2675, 2846
BstXI CCANNNNNNTGG 1 cut(s) 396
BstYI RGATCY 6 cut(s) 928, 1066, 1918, 2662, 2675, 2846
BsuI GTATCC 1 cut(s) 2468
BsuRI GGCC 8 cut(s) 92, 497, 739, 989, 2417, 2621, 2855, 2948
BtsCI GGATG 7 cut(s) 310, 957, 1270, 2118, 2131, 2162, 2964
BtsIMutI CAGTG 7 cut(s) 33, 323, 436, 660, 796, 1326, 1479
Cac8I GCNNGC 3 cut(s) 120, 720, 2780
CaiI CAGNNNCTG 1 cut(s) 301
CciI TCATGA 1 cut(s) 2803
CfoI GCGC 2 cut(s) 2485, 2497
CseI GACGC 1 cut(s) 2449
Csp6I GTAC 3 cut(s) 220, 1411, 2040
CspCI CAANNNNNGTGG 2 cut(s) 519, 554
CviQI GTAC 3 cut(s) 220, 1411, 2040
DinI GGCGCC 1 cut(s) 2484
DraI TTTAAA 1 cut(s) 1645
DriI GACNNNNNGTC 1 cut(s) 1522
EaeI YGGCCR 2 cut(s) 987, 2415
Eam1104I CTCTTC 4 cut(s) 105, 239, 2424, 2956
Eam1105I GACNNNNNGTC 1 cut(s) 1522
EarI CTCTTC 4 cut(s) 105, 239, 2424, 2956
Ecl136II GAGCTC 1 cut(s) 810
Eco130I CCWWGG 2 cut(s) 498, 1715
Eco147I AGGCCT 1 cut(s) 2948
Eco24I GRGCYC 2 cut(s) 812, 2623
Eco47I GGWCC 7 cut(s) 298, 449, 2234, 2383, 2586, 2939, 2961
Eco53kI GAGCTC 1 cut(s) 810
Eco57I CTGAAG 2 cut(s) 686, 1257
EcoICRI GAGCTC 1 cut(s) 810
EcoNI CCTNNNNNAGG 1 cut(s) 2318
EcoO109I RGGNCCY 4 cut(s) 298, 449, 2383, 2620
EcoRII CCWGG 3 cut(s) 300, 1566, 1777
EcoT14I CCWWGG 2 cut(s) 498, 1715
EcoT22I ATGCAT 1 cut(s) 65
EcoT38I GRGCYC 2 cut(s) 812, 2623
EgeI GGCGCC 1 cut(s) 2484
EheI GGCGCC 1 cut(s) 2484
ErhI CCWWGG 2 cut(s) 498, 1715
FaqI GGGAC 4 cut(s) 1085, 1106, 1714, 1738
FauNDI CATATG 1 cut(s) 59
FbaI TGATCA 1 cut(s) 2709
Fnu4HI GCNGC 7 cut(s) 868, 1284, 1775, 1959, 1980, 2060, 2769
FokI GGATG 7 cut(s) 317, 944, 1277, 2118, 2125, 2169, 2951
FriOI GRGCYC 2 cut(s) 812, 2623
Fsp4HI GCNGC 7 cut(s) 868, 1284, 1775, 1959, 1980, 2060, 2769
FspBI CTAG 7 cut(s) 750, 782, 1146, 2375, 2552, 2612, 2657
GlaI GCGC 2 cut(s) 2484, 2496
GluI GCNGC 7 cut(s) 868, 1284, 1775, 1959, 1980, 2060, 2769
GsaI CCCAGC 1 cut(s) 1695
GsuI CTGGAG 1 cut(s) 2727
HaeII RGCGCY 1 cut(s) 2486
HaeIII GGCC 8 cut(s) 92, 497, 739, 989, 2417, 2621, 2855, 2948
HapII CCGG 3 cut(s) 255, 533, 1028
HgaI GACGC 1 cut(s) 2449
HhaI GCGC 2 cut(s) 2485, 2497
Hin1I GRCGYC 1 cut(s) 2483
Hin6I GCGC 2 cut(s) 2483, 2495
HinP1I GCGC 2 cut(s) 2483, 2495
HincII GTYRAC 3 cut(s) 553, 1354, 2328
HindII GTYRAC 3 cut(s) 553, 1354, 2328
HindIII AAGCTT 3 cut(s) 1269, 1870, 1988
HpaI GTTAAC 1 cut(s) 553
HpaII CCGG 3 cut(s) 255, 533, 1028
HphI GGTGA 5 cut(s) 340, 1228, 1343, 1793, 2846
Hpy166II GTNNAC 7 cut(s) 436, 553, 1354, 2237, 2249, 2328, 2530
Hpy8I GTNNAC 7 cut(s) 436, 553, 1354, 2237, 2249, 2328, 2530
HpyCH4III ACNGT 6 cut(s) 245, 597, 1200, 1306, 1483, 2534
HpyCH4IV ACGT 1 cut(s) 1128
HpyF10VI GCNNNNNNNGC 4 cut(s) 264, 1021, 1367, 2272
HpySE526I ACGT 1 cut(s) 1128
Hsp92I GRCGYC 1 cut(s) 2483
HspAI GCGC 2 cut(s) 2483, 2495
KasI GGCGCC 1 cut(s) 2482
Kpn2I TCCGGA 1 cut(s) 1027
KpnI GGTACC 1 cut(s) 2043
Ksp22I TGATCA 1 cut(s) 2709
KspAI GTTAAC 1 cut(s) 553
LmnI GCTCC 4 cut(s) 864, 954, 2653, 2910
Lsp1109I GCAGC 6 cut(s) 854, 1295, 1945, 1966, 2071, 2780
LweI GCATC 5 cut(s) 966, 1257, 1966, 2172, 2920
MaeI CTAG 7 cut(s) 750, 782, 1146, 2375, 2552, 2612, 2657
MaeII ACGT 1 cut(s) 1128
MaeIII GTNAC 6 cut(s) 604, 650, 791, 1007, 1055, 2504
MboII GAAGA 8 cut(s) 92, 226, 555, 563, 1831, 2441, 2449, 2943
MflI RGATCY 6 cut(s) 928, 1066, 1918, 2662, 2675, 2846
MhlI GDGCHC 2 cut(s) 812, 2623
MlsI TGGCCA 2 cut(s) 989, 2417
MluNI TGGCCA 2 cut(s) 989, 2417
Mly113I GGCGCC 1 cut(s) 2483
MlyI GAGTC 6 cut(s) 601, 1088, 1769, 2333, 2861, 2899
MmeI TCCRAC 4 cut(s) 215, 393, 671, 1519
Mox20I TGGCCA 2 cut(s) 989, 2417
Mph1103I ATGCAT 1 cut(s) 65
MroI TCCGGA 1 cut(s) 1027
MroXI GAANNNNTTC 1 cut(s) 1506
MscI TGGCCA 2 cut(s) 989, 2417
MslI CAYNNNNRTG 4 cut(s) 62, 394, 617, 2357
Msp20I TGGCCA 2 cut(s) 989, 2417
MspA1I CMGCKG 1 cut(s) 107
MspCI CTTAAG 2 cut(s) 344, 763
MspI CCGG 3 cut(s) 255, 533, 1028
MspR9I CCNGG 3 cut(s) 302, 1568, 1779
Mva1269I GAATGC 1 cut(s) 1854
MvaI CCWGG 3 cut(s) 302, 1568, 1779
MwoI GCNNNNNNNGC 4 cut(s) 264, 1021, 1367, 2272
NarI GGCGCC 1 cut(s) 2483
NdeI CATATG 1 cut(s) 59
NlaIV GGNNCC 6 cut(s) 2041, 2484, 2621, 2664, 2677, 2912
NmuCI GTSAC 2 cut(s) 604, 791
NsiI ATGCAT 1 cut(s) 65
NspI RCATGY 4 cut(s) 212, 847, 1113, 2782
PaeI GCATGC 1 cut(s) 2782
PagI TCATGA 1 cut(s) 2803
PceI AGGCCT 1 cut(s) 2948
PciI ACATGT 1 cut(s) 1109
PctI GAATGC 1 cut(s) 1854
PdmI GAANNNNTTC 1 cut(s) 1506
PfeI GAWTC 6 cut(s) 385, 964, 1675, 1941, 2807, 2993
PflFI GACNNNGTC 1 cut(s) 1097
PfoI TCCNGGA 1 cut(s) 1566
PkrI GCNGC 7 cut(s) 869, 1285, 1776, 1960, 1981, 2061, 2770
PleI GAGTC 6 cut(s) 601, 1088, 1768, 2332, 2861, 2899
PluTI GGCGCC 1 cut(s) 2486
PpsI GAGTC 6 cut(s) 601, 1088, 1768, 2332, 2861, 2899
PpuMI RGGWCCY 3 cut(s) 298, 449, 2383
PscI ACATGT 1 cut(s) 1109
PsiI TTATAA 1 cut(s) 2019
Psp124BI GAGCTC 1 cut(s) 812
Psp5II RGGWCCY 3 cut(s) 298, 449, 2383
Psp6I CCWGG 3 cut(s) 300, 1566, 1777
PspFI CCCAGC 1 cut(s) 1691
PspGI CCWGG 3 cut(s) 300, 1566, 1777
PspN4I GGNNCC 6 cut(s) 2041, 2484, 2621, 2664, 2677, 2912
PspOMI GGGCCC 1 cut(s) 2619
PspPPI RGGWCCY 3 cut(s) 298, 449, 2383
PstI CTGCAG 1 cut(s) 2770
PstNI CAGNNNCTG 1 cut(s) 301
PsuI RGATCY 6 cut(s) 928, 1066, 1918, 2662, 2675, 2846
PsyI GACNNNGTC 1 cut(s) 1097
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 3 cut(s) 221, 1412, 2041
RsaNI GTAC 3 cut(s) 220, 1411, 2040
RseI CAYNNNNRTG 4 cut(s) 62, 394, 617, 2357
SacI GAGCTC 1 cut(s) 812
SatI GCNGC 7 cut(s) 868, 1284, 1775, 1959, 1980, 2060, 2769
ScaI AGTACT 1 cut(s) 221
SchI GAGTC 6 cut(s) 601, 1088, 1769, 2333, 2861, 2899
ScrFI CCNGG 3 cut(s) 302, 1568, 1779
SduI GDGCHC 2 cut(s) 812, 2623
SfaNI GCATC 5 cut(s) 966, 1257, 1966, 2172, 2920
SfcI CTRYAG 2 cut(s) 2469, 2766
SfoI GGCGCC 1 cut(s) 2484
SinI GGWCC 7 cut(s) 298, 449, 2234, 2383, 2586, 2939, 2961
SmiMI CAYNNNNRTG 4 cut(s) 62, 394, 617, 2357
SmlI CTYRAG 5 cut(s) 344, 763, 1891, 2857, 2956
SmoI CTYRAG 5 cut(s) 344, 763, 1891, 2857, 2956
SphI GCATGC 1 cut(s) 2782
SseBI AGGCCT 1 cut(s) 2948
SsiI CCGC 2 cut(s) 212, 1775
SspDI GGCGCC 1 cut(s) 2482
SspI AATATT 4 cut(s) 526, 1378, 1597, 2884
SspMI CTAG 7 cut(s) 750, 782, 1146, 2375, 2552, 2612, 2657
SstI GAGCTC 1 cut(s) 812
StuI AGGCCT 1 cut(s) 2948
StyD4I CCNGG 3 cut(s) 300, 1566, 1777
StyI CCWWGG 2 cut(s) 498, 1715
TaaI ACNGT 6 cut(s) 245, 597, 1200, 1306, 1483, 2534
TaiI ACGT 1 cut(s) 1131
TaqI TCGA 4 cut(s) 574, 1114, 2166, 2791
TaqII GACCGA 3 cut(s) 1165, 2222, 2574
TatI WGTACW 2 cut(s) 219, 1410
TauI GCSGC 1 cut(s) 1777
TfiI GAWTC 6 cut(s) 385, 964, 1675, 1941, 2807, 2993
TscAI CASTG 7 cut(s) 33, 330, 436, 667, 796, 1333, 1486
TseFI GTSAC 2 cut(s) 604, 791
TseI GCWGC 6 cut(s) 867, 1283, 1958, 1979, 2059, 2768
Tsp45I GTSAC 2 cut(s) 604, 791
TspGWI ACGGA 1 cut(s) 816
TspRI CASTG 7 cut(s) 33, 330, 436, 667, 796, 1333, 1486
Tth111I GACNNNGTC 1 cut(s) 1097
Vha464I CTTAAG 2 cut(s) 344, 763
VpaK11BI GGWCC 7 cut(s) 298, 449, 2234, 2383, 2586, 2939, 2961
XagI CCTNNNNNAGG 1 cut(s) 2318
XapI RAATTY 3 cut(s) 163, 416, 2579
XbaI TCTAGA 2 cut(s) 1145, 2611
XceI RCATGY 4 cut(s) 212, 847, 1113, 2782
XcmI CCANNNNNNNNNTGG 1 cut(s) 286
XmnI GAANNNNTTC 1 cut(s) 1506
XspI CTAG 7 cut(s) 750, 782, 1146, 2375, 2552, 2612, 2657
ZrmI AGTACT 1 cut(s) 221
Zsp2I ATGCAT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.