MD10G1273200.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
36498331 .. 36505277
6947 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1273200.v1.1.491

Sequence Viewer

Length: 3054 bp
ATGCTGAAGGCGAAGAAAAAGATGGCAGAATTTGATATTGGGATCATATTGGTCATCTGCTTTTGCTGCATATTAACACTCAAAGTTGAAGCTCAATCGCAATCTGTACGTCTTGCTCCCACTGAAGTGGAAGCTCTAAAAGAAATAGCTACACAAATTGGAAAACAAGACTGGAACTTCAGCATAGACCCATGCAGCAATGACACAAATTGGGCTACCCCAAAATCTGATAACTTGCCTCTCTACAATAACACTGTCATCTGCAACTGCTCCTACCCTGATGGTTATTGCCACGTTGTCAGCATTTTTCTCAAAGGACAAGATCTTGCGGGTGTAGTTCCACCATCTGTTGCAAAATTACCCTATCTAAAAATTGTTGATTTCACCCGGAACTACCTCAGTGGTACTATACCGAGTGAATGGGCTTCTACAAAGTTGGAATATGTATCCATTACCGTGAACAACTTAACGGGACCAATCCCTGGCTACTTGGGAAACATTACCACCCTAATATACATGAGCTTAGAGAATAACCAGTTTTCTGGAACTGTTCCTCCTGAGCTTGGGAAATTGGTTAACTTGAATAATCTCATTCTGAATGCAAACAATCTCACAGGAGAGCTGCCGGTGGCTCTAACTAATCTGACTAAGTTAACAGAACTTAGGATTAGCATGAATAACTTCACTGGAAGAATACCAAATTTTATTCAAAGCTGGAAGCAACTTAAGAAACTAGAGATCCAAGCTAGTGGTCTCCAAGGGCCCATTCCTTCTAGCATTTCTGGCTTGAGTAATTTAGCAGAGCTAAGGATCAGCGATATCGATGGAGGGGGTTCAGAATTTCCGCCCTTGAGTAGTATGACAAACATGAATAGTTTAATGTTGAGGAGCTGCAACTTATCCGGAAGTATCCCTGATTATATATCAGCCATGACAACACTGAAAATATTAGATCTGAGCTTCAACAGGCTGGAGGGGAACATTCCTGATAATATTGGAACTCTGACAAACCTGCAGTACTTGTATCTCACAAGTAACTTGCTCCACGGGTCTATTCCGGACTGGATCAAGAGCAGAGATAGTCATTACCAGATAGATGTTTCTTACAATAATTTTTCTGTGAATTCTGAGCCTGCTTCGTGTAGAGAGACCCTGAACTTGTTCAAAAGCTTTACAGCACAAGACAACTCATTATTTGGAGAGTGTCTGAATAGCTATCCATGTCCTAAAGATCGATATTCATTACACATAAATTGTGGTGGAACGGCAACCACTGTTGGAGGAGTTGACTTTGAAGCGGATACAGACTTGGGAGGTCCAGCAAAGTTCGTTCCAGTGAGACCTATGTGGGGAATCAGTACCACCGGACATTTCTGGGATGCTAACCCCACCTCTAATGACTACATTGCAAATAACATATCGATACTTGGAATGGACAACTCTGAGTTGTACACAAATGCACGCCTATCGCCTCTTTCTCTCACTTATTATGCACGCTGCCTCGGAAATGGAAATTATACTGTGAGACTTCACTTTTCGGAGATAATAATCAGAGACAACAGATCTTTCTATAGTCTTGGAAGACGGATATTTGATGTGTATATTCAGGAGAAACTAGTATGGAAGGATTTTGACATCGAAGAGGAAGCACAAGGGGTTGATAGGGTAGTCATTAAGGAACTTAAAGCAGTTCAGGTTAAGGATAAAACTTTATTGATCCGGCTTAAGTGGTCTGGGAAAGGGACAACAGCTTCCCCAAAGAGAGGAACTTATGGTCCTCTTATATCAGCTATCTCCATGGACTCTGAATTCAAGCCTCCTCAAGAAAGCAAAAACAAAGTAAGTATTATTGTTGGAGCATCAGTTGGAGGTTCAGTTTTGGGCCTCATTTTCTTGGTTTTAGGCATTCTTTGGTGGAATGACTGTTTCGATAGCAGGACGTCAAGGGAAAAAGCTTTGAGAGGACTGGATCTGCAAACTGGTTTTTTCACCTTTAGACAAATCAAAGCTGCCACTAACAACTTCAATCCTAAAAACAAAATTGGGGAAGGCGGTTTTGGGTCTGTCTACAAGGGTACATTGTTGGATGGAACTATAATCGCGGTTAAGCAACTATCTTCAAAATCAAAGCAAGGAAATCGTGAGTTTGTCAATGAAATAGGCATGATATCTGGTTTACATCATCCAAATCTTGTCAGATTGTATGGATGTTGTATCGAATCAAATCAGTTACTGTTAGTGTATGAATACATGGAAAACAATAGCCTTGCACATACGTTGTTCGGTCCAGAGGATGGTCCATTAAATATGGATTGGCCTACAAGGCAGAAAATATGCATAGGCATAGCAAGAGGTTTGTCCTTTTTGCATGAGGAATCAACGCTAAAGATTGTGCATAGAGACATCAAAGCGACAAATATCTTACTAGACCGAGACCTTAACCCTAAGATCTCCGACTTTGGTTTGGCCAAGCTCGATGAAGAGGAGAACACCCACATTAGCACTAGAGTGGCCGGAACTGTAGGATACATGGCGCCGGAATATGCACTATGGGGTTACTTAACCGACAAAGCAGATGTGTACAGCTTCGGCGTTGTTGCGTTGGAGATTGTTGCTGGAAAGAACAACGTGAAGTATAGACCAAATCAGAATTTTGTATGCCTTGTGGATTGGGCCCTTGTCTTGCAACAAAAAGGAAATTTAATGGACCTGGTGGACCCTAGGTTGGGGTCCCAATTCAGCAAGGAAGAGGCGATTCGAATGGTGAAGGTGGCGCTGCTATGCACCAATCCGGCGCCCGCTTTGAGGCCTACAATGTCTGCAGTTGTGAGAATGCTTGAAGGGGAGACTGCTGTGCATGAATTGATCATGGATCCGAGTATATACGGCGACGAAATGAGGCTAACGGCCGTGAGAAACCAGTTTGATCAGATTGCACAAGAGAGCTCAAGTGGAACTCAGAGCCGCCTTCGTTCTTCTGATTCAACATGGATTGGTTCTTCTGCTACCGCTATGTCTTCTGATCTCTACAAAGTTAGTTCCGGTTCTTATTAA

Protein Analysis

1018

Amino Acids

112.49

Weight (kDa)

6.1

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 162 - 274 3.5e-10 Leucine-rich repeat region
LRR_8 PF13855 289 - 348 5e-06 Leucine rich repeat
Malectin PF11721 414 - 598 1.2e-36 Malectin domain
Pkinase PF00069 676 - 942 4e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 678 - 945 2.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1943
Acc36I ACCTGC 1 cut(s) 1020
AccB1I GGYRCC 2 cut(s) 2533, 2794
AccB7I CCANNNNNTGG 2 cut(s) 482, 2294
AccI GTMKAC 1 cut(s) 2067
AccII CGCG 1 cut(s) 2102
AccIII TCCGGA 2 cut(s) 902, 1057
AciI CCGC 8 cut(s) 329, 845, 1298, 2052, 2102, 2799, 2965, 3009
AclWI GGATC 8 cut(s) 50, 733, 818, 1073, 1711, 1977, 2867, 2880
AcoI YGGCCR 3 cut(s) 2466, 2511, 2907
AcsI RAATTY 7 cut(s) 29, 700, 839, 1123, 1808, 2650, 2698
AcuI CTGAAG 3 cut(s) 26, 144, 163
AcyI GRCGYC 3 cut(s) 1940, 2534, 2795
AfaI GTAC 7 cut(s) 108, 406, 1019, 1360, 1451, 2077, 2582
AfiI CCNNNNNNNGG 8 cut(s) 482, 563, 1349, 1763, 2294, 2725, 2726, 2805
AflII CTTAAG 2 cut(s) 725, 1724
AhlI ACTAGT 1 cut(s) 1615
AjnI CCWGG 2 cut(s) 481, 2709
AjuI GAANNNNNNNTTGG 6 cut(s) 21, 53, 750, 782, 2040, 2072
AleI CACNNNNGTG 2 cut(s) 125, 2507
AloI GAACNNNNNNTCC 4 cut(s) 538, 570, 1759, 1791
Alw21I GWGCWC 1 cut(s) 2948
Alw26I GTCTC 8 cut(s) 758, 1142, 1333, 1519, 1548, 2394, 2427, 2840
AlwI GGATC 8 cut(s) 50, 733, 818, 1073, 1711, 1977, 2867, 2880
AlwNI CAGNNNCTG 1 cut(s) 2233
Aor13HI TCCGGA 2 cut(s) 902, 1057
AoxI GGCC 8 cut(s) 761, 1882, 2315, 2466, 2511, 2673, 2807, 2907
ApaI GGGCCC 2 cut(s) 765, 2677
ApeKI GCWGC 7 cut(s) 66, 195, 622, 891, 1497, 2009, 2776
ApoI RAATTY 7 cut(s) 29, 700, 839, 1123, 1808, 2650, 2698
Asp700I GAANNNNTTC 2 cut(s) 680, 1160
AspA2I CCTAGG 1 cut(s) 2720
AspLEI GCGC 3 cut(s) 2536, 2776, 2797
AsuC2I CCSGG 1 cut(s) 388
AsuHPI GGTGA 3 cut(s) 376, 1981, 2776
AsuII TTCGAA 1 cut(s) 2758
AvaII GGWCC 8 cut(s) 473, 1316, 1775, 2285, 2297, 2707, 2716, 2730
AvrII CCTAGG 1 cut(s) 2720
BaeGI GKGCMC 2 cut(s) 765, 2677
BalI TGGCCA 1 cut(s) 2468
BamHI GGATCC 1 cut(s) 2872
BanI GGYRCC 2 cut(s) 2533, 2794
BanII GRGCYC 3 cut(s) 765, 2677, 2948
BbsI GAAGAC 2 cut(s) 1588, 3009
Bbv12I GWGCWC 1 cut(s) 2948
BbvI GCAGC 7 cut(s) 53, 207, 609, 878, 1484, 1996, 2763
BccI CCATC 6 cut(s) 16, 275, 352, 818, 2081, 2288
BceAI ACGGC 4 cut(s) 1281, 2894, 2902, 2922
BcgI CGANNNNNNTGC 4 cut(s) 1449, 1483, 2120, 2154
BciT130I CCWGG 2 cut(s) 483, 2711
BciVI GTATCC 4 cut(s) 457, 920, 1294, 2519
BclI TGATCA 2 cut(s) 2865, 2926
BcnI CCSGG 1 cut(s) 388
BcoDI GTCTC 8 cut(s) 758, 1142, 1333, 1519, 1548, 2394, 2427, 2840
BcuI ACTAGT 1 cut(s) 1615
BfaI CTAG 7 cut(s) 734, 747, 774, 1616, 2426, 2505, 2721
BfmI CTRYAG 4 cut(s) 1013, 1570, 2520, 2820
BfoI RGCGCY 3 cut(s) 2537, 2777, 2798
BfrI CTTAAG 2 cut(s) 725, 1724
BfuAI ACCTGC 1 cut(s) 1020
BfuI GTATCC 4 cut(s) 457, 920, 1294, 2519
BglI GCCNNNNNGGC 1 cut(s) 2323
BglII AGATCT 4 cut(s) 322, 952, 1562, 2448
BisI GCNGC 8 cut(s) 67, 196, 623, 892, 1498, 2010, 2777, 2965
BlnI CCTAGG 1 cut(s) 2720
BlsI GCNGC 8 cut(s) 68, 197, 624, 893, 1499, 2011, 2778, 2966
BmcAI AGTACT 1 cut(s) 1019
Bme1390I CCNGG 3 cut(s) 388, 483, 2711
Bme18I GGWCC 8 cut(s) 473, 1316, 1775, 2285, 2297, 2707, 2716, 2730
BmiI GGNNCC 9 cut(s) 474, 763, 2535, 2675, 2718, 2731, 2732, 2796, 2874
BmrFI CCNGG 3 cut(s) 388, 483, 2711
BmsI GCATC 2 cut(s) 1369, 1868
BpiI GAAGAC 2 cut(s) 1588, 3009
BpmI CTGGAG 1 cut(s) 992
Bpu10I CCTNAGC 2 cut(s) 558, 806
Bpu14I TTCGAA 1 cut(s) 2758
BpuEI CTTGAG 4 cut(s) 808, 871, 1806, 2932
BpuMI CCSGG 1 cut(s) 388
Bsa29I ATCGAT 3 cut(s) 822, 1234, 1421
BsaBI GATNNNNATC 1 cut(s) 1547
BsaHI GRCGYC 3 cut(s) 1940, 2534, 2795
BsaI GGTCTC 4 cut(s) 758, 1142, 1333, 2427
BsaJI CCNNGG 6 cut(s) 481, 757, 1045, 1501, 1797, 2720
BsaWI WCCGGW 4 cut(s) 902, 1057, 1364, 3041
BsaXI ACNNNNNCTCC 6 cut(s) 538, 568, 1848, 1860, 1878, 1890
Bsc4I CCNNNNNNNGG 8 cut(s) 482, 563, 1349, 1763, 2294, 2725, 2726, 2805
Bse118I RCCGGY 1 cut(s) 625
Bse1I ACTGG 8 cut(s) 176, 535, 691, 1067, 1334, 1971, 1984, 2920
Bse3DI GCAATG 2 cut(s) 205, 1404
Bse8I GATNNNNATC 1 cut(s) 1547
BseAI TCCGGA 2 cut(s) 902, 1057
BseBI CCWGG 2 cut(s) 483, 2711
BseCI ATCGAT 3 cut(s) 822, 1234, 1421
BseDI CCNNGG 6 cut(s) 481, 757, 1045, 1501, 1797, 2720
BseGI GGATG 5 cut(s) 1384, 2092, 2182, 2213, 2299
BseJI GATNNNNATC 1 cut(s) 1547
BseLI CCNNNNNNNGG 8 cut(s) 482, 563, 1349, 1763, 2294, 2725, 2726, 2805
BseMI GCAATG 2 cut(s) 205, 1404
BseMII CTCAG 6 cut(s) 412, 549, 947, 1119, 1434, 2972
BseNI ACTGG 8 cut(s) 176, 535, 691, 1067, 1334, 1971, 1984, 2920
BseRI GAGGAG 4 cut(s) 901, 1296, 1809, 2498
BseSI GKGCMC 2 cut(s) 765, 2677
BseX3I CGGCCG 1 cut(s) 2907
BseXI GCAGC 7 cut(s) 53, 207, 609, 878, 1484, 1996, 2763
Bsh1236I CGCG 1 cut(s) 2102
Bsh1285I CGRYCG 1 cut(s) 2910
BshFI GGCC 8 cut(s) 763, 1884, 2317, 2468, 2513, 2675, 2809, 2909
BshNI GGYRCC 2 cut(s) 2533, 2794
BshVI ATCGAT 3 cut(s) 822, 1234, 1421
BsiEI CGRYCG 1 cut(s) 2910
BsiHKAI GWGCWC 1 cut(s) 2948
BslFI GGGAC 3 cut(s) 486, 1756, 2716
BslI CCNNNNNNNGG 8 cut(s) 482, 563, 1349, 1763, 2294, 2725, 2726, 2805
BsmAI GTCTC 8 cut(s) 758, 1142, 1333, 1519, 1548, 2394, 2427, 2840
BsmFI GGGAC 3 cut(s) 486, 1756, 2716
BsmI GAATGC 3 cut(s) 604, 1905, 2838
BsnI GGCC 8 cut(s) 763, 1884, 2317, 2468, 2513, 2675, 2809, 2909
Bso31I GGTCTC 4 cut(s) 758, 1142, 1333, 2427
Bsp119I TTCGAA 1 cut(s) 2758
Bsp120I GGGCCC 2 cut(s) 761, 2673
Bsp1286I GDGCHC 3 cut(s) 765, 2677, 2948
Bsp13I TCCGGA 2 cut(s) 902, 1057
Bsp1407I TGTACA 2 cut(s) 1449, 2580
Bsp19I CCATGG 1 cut(s) 1797
BspACI CCGC 8 cut(s) 329, 845, 1298, 2052, 2102, 2799, 2965, 3009
BspANI GGCC 8 cut(s) 763, 1884, 2317, 2468, 2513, 2675, 2809, 2909
BspCNI CTCAG 6 cut(s) 411, 550, 948, 1120, 1435, 2971
BspDI ATCGAT 3 cut(s) 822, 1234, 1421
BspEI TCCGGA 2 cut(s) 902, 1057
BspFNI CGCG 1 cut(s) 2102
BspLI GGNNCC 9 cut(s) 474, 763, 2535, 2675, 2718, 2731, 2732, 2796, 2874
BspMAI CTGCAG 2 cut(s) 1017, 2824
BspMI ACCTGC 1 cut(s) 1020
BspPI GGATC 8 cut(s) 50, 733, 818, 1073, 1711, 1977, 2867, 2880
BspT104I TTCGAA 1 cut(s) 2758
BspT107I GGYRCC 2 cut(s) 2533, 2794
BspTI CTTAAG 2 cut(s) 725, 1724
BspTNI GGTCTC 4 cut(s) 758, 1142, 1333, 2427
BsrDI GCAATG 2 cut(s) 205, 1404
BsrFI RCCGGY 1 cut(s) 625
BsrGI TGTACA 2 cut(s) 1449, 2580
BsrI ACTGG 8 cut(s) 176, 535, 691, 1067, 1334, 1971, 1984, 2920
BssAI RCCGGY 1 cut(s) 625
BssECI CCNNGG 6 cut(s) 481, 757, 1045, 1501, 1797, 2720
BssNI GRCGYC 3 cut(s) 1940, 2534, 2795
BssT1I CCWWGG 3 cut(s) 757, 1797, 2720
Bst2UI CCWGG 2 cut(s) 483, 2711
Bst4CI ACNGT 8 cut(s) 256, 457, 550, 1276, 1522, 1925, 2235, 2521
Bst6I CTCTTC 3 cut(s) 1635, 2475, 2742
BstACI GRCGYC 3 cut(s) 1940, 2534, 2795
BstAFI CTTAAG 2 cut(s) 725, 1724
BstAUI TGTACA 2 cut(s) 1449, 2580
BstBI TTCGAA 1 cut(s) 2758
BstC8I GCNNGC 4 cut(s) 1134, 1462, 1495, 2799
BstDSI CCRYGG 2 cut(s) 1045, 1797
BstF5I GGATG 5 cut(s) 1384, 2092, 2182, 2213, 2299
BstFNI CGCG 1 cut(s) 2102
BstH2I RGCGCY 3 cut(s) 2537, 2777, 2798
BstHHI GCGC 3 cut(s) 2536, 2776, 2797
BstMAI GTCTC 8 cut(s) 758, 1142, 1333, 1519, 1548, 2394, 2427, 2840
BstMCI CGRYCG 1 cut(s) 2910
BstMWI GCNNNNNNNGC 3 cut(s) 66, 783, 2323
BstNI CCWGG 2 cut(s) 483, 2711
BstSCI CCNGG 3 cut(s) 386, 481, 2709
BstSFI CTRYAG 4 cut(s) 1013, 1570, 2520, 2820
BstSLI GKGCMC 2 cut(s) 765, 2677
BstUI CGCG 1 cut(s) 2102
BstV1I GCAGC 7 cut(s) 53, 207, 609, 878, 1484, 1996, 2763
BstV2I GAAGAC 2 cut(s) 1588, 3009
BstX2I RGATCY 7 cut(s) 322, 738, 952, 1562, 1969, 2448, 2872
BstXI CCANNNNNNTGG 3 cut(s) 127, 542, 749
BstYI RGATCY 7 cut(s) 322, 738, 952, 1562, 1969, 2448, 2872
BstZI CGGCCG 1 cut(s) 2907
Bsu15I ATCGAT 3 cut(s) 822, 1234, 1421
BsuI GTATCC 4 cut(s) 457, 920, 1294, 2519
BsuRI GGCC 8 cut(s) 763, 1884, 2317, 2468, 2513, 2675, 2809, 2909
BsuTUI ATCGAT 3 cut(s) 822, 1234, 1421
BtgI CCRYGG 2 cut(s) 1045, 1797
BtsCI GGATG 5 cut(s) 1384, 2092, 2182, 2213, 2299
BtsIMutI CAGTG 7 cut(s) 120, 252, 406, 684, 938, 1272, 1341
BveI ACCTGC 1 cut(s) 1020
Cac8I GCNNGC 4 cut(s) 1134, 1462, 1495, 2799
CaiI CAGNNNCTG 1 cut(s) 2233
CfoI GCGC 3 cut(s) 2536, 2776, 2797
Cfr10I RCCGGY 1 cut(s) 625
ClaI ATCGAT 3 cut(s) 822, 1234, 1421
CsiI ACCWGGT 1 cut(s) 2709
Csp6I GTAC 7 cut(s) 107, 405, 1018, 1359, 1450, 2076, 2581
CviQI GTAC 7 cut(s) 107, 405, 1018, 1359, 1450, 2076, 2581
DinI GGCGCC 2 cut(s) 2535, 2796
EaeI YGGCCR 3 cut(s) 2466, 2511, 2907
EagI CGGCCG 1 cut(s) 2907
Eam1104I CTCTTC 3 cut(s) 1635, 2475, 2742
EarI CTCTTC 3 cut(s) 1635, 2475, 2742
EciI GGCGGA 1 cut(s) 834
Ecl136II GAGCTC 1 cut(s) 2946
EclXI CGGCCG 1 cut(s) 2907
Eco130I CCWWGG 3 cut(s) 757, 1797, 2720
Eco147I AGGCCT 1 cut(s) 2809
Eco24I GRGCYC 3 cut(s) 765, 2677, 2948
Eco31I GGTCTC 4 cut(s) 758, 1142, 1333, 2427
Eco32I GATATC 2 cut(s) 820, 2169
Eco47I GGWCC 8 cut(s) 473, 1316, 1775, 2285, 2297, 2707, 2716, 2730
Eco52I CGGCCG 1 cut(s) 2907
Eco53kI GAGCTC 1 cut(s) 2946
Eco57I CTGAAG 3 cut(s) 26, 144, 163
EcoICRI GAGCTC 1 cut(s) 2946
EcoO109I RGGNCCY 3 cut(s) 761, 2674, 2730
EcoRI GAATTC 2 cut(s) 1123, 1808
EcoRII CCWGG 2 cut(s) 481, 2709
EcoRV GATATC 2 cut(s) 820, 2169
EcoT14I CCWWGG 3 cut(s) 757, 1797, 2720
EcoT22I ATGCAT 1 cut(s) 2339
EcoT38I GRGCYC 3 cut(s) 765, 2677, 2948
EgeI GGCGCC 2 cut(s) 2535, 2796
EheI GGCGCC 2 cut(s) 2535, 2796
ErhI CCWWGG 3 cut(s) 757, 1797, 2720
FaqI GGGAC 3 cut(s) 486, 1756, 2716
FauI CCCGC 2 cut(s) 322, 2806
FbaI TGATCA 2 cut(s) 2865, 2926
FblI GTMKAC 1 cut(s) 2067
Fnu4HI GCNGC 8 cut(s) 67, 196, 623, 892, 1498, 2010, 2777, 2965
FokI GGATG 5 cut(s) 1391, 2099, 2169, 2220, 2306
FriOI GRGCYC 3 cut(s) 765, 2677, 2948
Fsp4HI GCNGC 8 cut(s) 67, 196, 623, 892, 1498, 2010, 2777, 2965
FspBI CTAG 7 cut(s) 734, 747, 774, 1616, 2426, 2505, 2721
GlaI GCGC 3 cut(s) 2535, 2775, 2796
GluI GCNGC 8 cut(s) 67, 196, 623, 892, 1498, 2010, 2777, 2965
GsuI CTGGAG 1 cut(s) 992
HaeII RGCGCY 3 cut(s) 2537, 2777, 2798
HaeIII GGCC 8 cut(s) 763, 1884, 2317, 2468, 2513, 2675, 2809, 2909
HhaI GCGC 3 cut(s) 2536, 2776, 2797
Hin1I GRCGYC 3 cut(s) 1940, 2534, 2795
Hin6I GCGC 3 cut(s) 2534, 2774, 2795
HinP1I GCGC 3 cut(s) 2534, 2774, 2795
HincII GTYRAC 3 cut(s) 577, 654, 1288
HindII GTYRAC 3 cut(s) 577, 654, 1288
HindIII AAGCTT 2 cut(s) 1168, 1953
HinfI GANTC 6 cut(s) 1353, 1802, 2219, 2375, 2755, 2981
HpaI GTTAAC 2 cut(s) 577, 654
HphI GGTGA 3 cut(s) 376, 1981, 2776
Hpy166II GTNNAC 9 cut(s) 460, 577, 654, 1288, 1452, 2068, 2177, 2581, 2716
Hpy8I GTNNAC 9 cut(s) 460, 577, 654, 1288, 1452, 2068, 2177, 2581, 2716
Hpy99I CGWCG 1 cut(s) 2894
HpyAV CCTTC 6 cut(s) 780, 1618, 2042, 2761, 2834, 2978
HpyCH4III ACNGT 8 cut(s) 256, 457, 550, 1276, 1522, 1925, 2235, 2521
HpyCH4IV ACGT 5 cut(s) 109, 294, 1940, 2276, 2628
HpyF10VI GCNNNNNNNGC 3 cut(s) 66, 783, 2323
HpySE526I ACGT 5 cut(s) 109, 294, 1940, 2276, 2628
Hsp92I GRCGYC 3 cut(s) 1940, 2534, 2795
HspAI GCGC 3 cut(s) 2534, 2774, 2795
KasI GGCGCC 2 cut(s) 2533, 2794
KflI GGGWCCC 1 cut(s) 2730
Kpn2I TCCGGA 2 cut(s) 902, 1057
Ksp22I TGATCA 2 cut(s) 2865, 2926
KspAI GTTAAC 2 cut(s) 577, 654
LmnI GCTCC 5 cut(s) 121, 275, 888, 1047, 1856
Lsp1109I GCAGC 7 cut(s) 53, 207, 609, 878, 1484, 1996, 2763
LweI GCATC 2 cut(s) 1369, 1868
MabI ACCWGGT 1 cut(s) 2709
MaeI CTAG 7 cut(s) 734, 747, 774, 1616, 2426, 2505, 2721
MaeII ACGT 5 cut(s) 109, 294, 1940, 2276, 2628
MaeIII GTNAC 3 cut(s) 1034, 2229, 2555
MflI RGATCY 7 cut(s) 322, 738, 952, 1562, 1969, 2448, 2872
MhlI GDGCHC 3 cut(s) 765, 2677, 2948
MlsI TGGCCA 1 cut(s) 2468
MluNI TGGCCA 1 cut(s) 2468
Mly113I GGCGCC 2 cut(s) 2534, 2795
MlyI GAGTC 1 cut(s) 1796
MmeI TCCRAC 7 cut(s) 417, 1258, 1834, 1846, 2064, 2478, 2583
Mox20I TGGCCA 1 cut(s) 2468
Mph1103I ATGCAT 1 cut(s) 2339
MroI TCCGGA 2 cut(s) 902, 1057
MroXI GAANNNNTTC 2 cut(s) 680, 1160
MscI TGGCCA 1 cut(s) 2468
MslI CAYNNNNRTG 3 cut(s) 125, 455, 2507
Msp20I TGGCCA 1 cut(s) 2468
MspCI CTTAAG 2 cut(s) 725, 1724
MspR9I CCNGG 3 cut(s) 388, 483, 2711
Mva1269I GAATGC 3 cut(s) 604, 1905, 2838
MvaI CCWGG 2 cut(s) 483, 2711
MvnI CGCG 1 cut(s) 2102
MwoI GCNNNNNNNGC 3 cut(s) 66, 783, 2323
NarI GGCGCC 2 cut(s) 2534, 2795
NciI CCSGG 1 cut(s) 388
NcoI CCATGG 1 cut(s) 1797
NlaIV GGNNCC 9 cut(s) 474, 763, 2535, 2675, 2718, 2731, 2732, 2796, 2874
NsiI ATGCAT 1 cut(s) 2339
NspV TTCGAA 1 cut(s) 2758
OliI CACNNNNGTG 2 cut(s) 125, 2507
PceI AGGCCT 1 cut(s) 2809
PctI GAATGC 3 cut(s) 604, 1905, 2838
PdmI GAANNNNTTC 2 cut(s) 680, 1160
PfeI GAWTC 5 cut(s) 1353, 2219, 2375, 2755, 2981
PflMI CCANNNNNTGG 2 cut(s) 482, 2294
PkrI GCNGC 8 cut(s) 68, 197, 624, 893, 1499, 2011, 2778, 2966
PleI GAGTC 1 cut(s) 1796
PluTI GGCGCC 2 cut(s) 2537, 2798
PpsI GAGTC 1 cut(s) 1796
PpuMI RGGWCCY 1 cut(s) 2730
Psp124BI GAGCTC 1 cut(s) 2948
Psp5II RGGWCCY 1 cut(s) 2730
Psp6I CCWGG 2 cut(s) 481, 2709
PspGI CCWGG 2 cut(s) 481, 2709
PspN4I GGNNCC 9 cut(s) 474, 763, 2535, 2675, 2718, 2731, 2732, 2796, 2874
PspOMI GGGCCC 2 cut(s) 761, 2673
PspPPI RGGWCCY 1 cut(s) 2730
PstI CTGCAG 2 cut(s) 1017, 2824
PstNI CAGNNNCTG 1 cut(s) 2233
PsuI RGATCY 7 cut(s) 322, 738, 952, 1562, 1969, 2448, 2872
RsaI GTAC 7 cut(s) 108, 406, 1019, 1360, 1451, 2077, 2582
RsaNI GTAC 7 cut(s) 107, 405, 1018, 1359, 1450, 2076, 2581
RseI CAYNNNNRTG 3 cut(s) 125, 455, 2507
SacI GAGCTC 1 cut(s) 2948
SatI GCNGC 8 cut(s) 67, 196, 623, 892, 1498, 2010, 2777, 2965
ScaI AGTACT 1 cut(s) 1019
SchI GAGTC 1 cut(s) 1796
ScrFI CCNGG 3 cut(s) 388, 483, 2711
SduI GDGCHC 3 cut(s) 765, 2677, 2948
SexAI ACCWGGT 1 cut(s) 2709
SfaNI GCATC 2 cut(s) 1369, 1868
SfcI CTRYAG 4 cut(s) 1013, 1570, 2520, 2820
SfoI GGCGCC 2 cut(s) 2535, 2796
SfuI TTCGAA 1 cut(s) 2758
SinI GGWCC 8 cut(s) 473, 1316, 1775, 2285, 2297, 2707, 2716, 2730
SmiMI CAYNNNNRTG 3 cut(s) 125, 455, 2507
SmlI CTYRAG 6 cut(s) 725, 787, 850, 1724, 1821, 2947
SmoI CTYRAG 6 cut(s) 725, 787, 850, 1724, 1821, 2947
SpeI ACTAGT 1 cut(s) 1615
SseBI AGGCCT 1 cut(s) 2809
SsiI CCGC 8 cut(s) 329, 845, 1298, 2052, 2102, 2799, 2965, 3009
SspDI GGCGCC 2 cut(s) 2533, 2794
SspI AATATT 2 cut(s) 948, 994
SspMI CTAG 7 cut(s) 734, 747, 774, 1616, 2426, 2505, 2721
SstI GAGCTC 1 cut(s) 2948
StuI AGGCCT 1 cut(s) 2809
StyD4I CCNGG 3 cut(s) 386, 481, 2709
StyI CCWWGG 3 cut(s) 757, 1797, 2720
TaaI ACNGT 8 cut(s) 256, 457, 550, 1276, 1522, 1925, 2235, 2521
TaiI ACGT 5 cut(s) 112, 297, 1943, 2279, 2631
TaqI TCGA 8 cut(s) 822, 1234, 1421, 1638, 1929, 2217, 2475, 2758
TaqII GACCGA 2 cut(s) 2273, 2445
TatI WGTACW 3 cut(s) 1017, 1449, 2580
TauI GCSGC 1 cut(s) 2967
TfiI GAWTC 5 cut(s) 1353, 2219, 2375, 2755, 2981
TscAI CASTG 7 cut(s) 127, 259, 406, 691, 945, 1279, 1341
TseI GCWGC 7 cut(s) 66, 195, 622, 891, 1497, 2009, 2776
TspDTI ATGAA 7 cut(s) 689, 884, 1230, 2169, 2259, 2493, 2874
TspGWI ACGGA 1 cut(s) 1600
TspRI CASTG 7 cut(s) 127, 259, 406, 691, 945, 1279, 1341
Van91I CCANNNNNTGG 2 cut(s) 482, 2294
Vha464I CTTAAG 2 cut(s) 725, 1724
VpaK11BI GGWCC 8 cut(s) 473, 1316, 1775, 2285, 2297, 2707, 2716, 2730
XapI RAATTY 7 cut(s) 29, 700, 839, 1123, 1808, 2650, 2698
XmaJI CCTAGG 1 cut(s) 2720
XmiI GTMKAC 1 cut(s) 2067
XmnI GAANNNNTTC 2 cut(s) 680, 1160
XspI CTAG 7 cut(s) 734, 747, 774, 1616, 2426, 2505, 2721
ZraI GACGTC 1 cut(s) 1941
ZrmI AGTACT 1 cut(s) 1019
Zsp2I ATGCAT 1 cut(s) 2339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.