Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Forward (+)

8157916 .. 8162161

Gene Structure 4246 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29281

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGAAAAACTCTGAGTTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACTTATTATGCAAACTGCCTAAGAGATGGAAATTATACTGTGAAACTTCATTTTGCGGAGATAGTAATCCGAGGCAATAGATCTTATTACAGTGTTGGAAGACGGATATTTGACGTATATATTCAGGATTTTGACATTGCGAAGGCAGCAAAAGGTGTTGATAAGGAAGTCATTAAGGAGACAAAGGCGGTTCAGGTTAAGAATAAAACTCTAGAGATTCGGTTTCATTGGTCTGCAAAAGGGACAACAGATACCCCAAGGAGAGGAGTCTATGGTCCCCTTATATCAGCCATTTCTATAAAATCTGAGTTCAAGCATTATTCCAAAACAAAGATGTATATTTTGGTTGGAGTTTCAGTTGGAGCTACGGTTTTGTGCCTTTTCTTCTTAATTTTTGGCATTATTTGGTGGAAAGGCTGTCGGGTGGATAACCAGACATCAAGGGAAGAAGTTCTGAGAGGACTGGATCTGCAAACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTATAAACAAAATTGGAGAAGGTGGTTTTGGTCCCGTCTACAAGGGTACATTATTGGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCGAAGCAGGAAAATCGTGAATTTGTGAACGAAATAGGCATGATCTCTTGTTTGCAACATCCAAATCTGGTTAGAATGTATGGATGTTGTATTGAAGCAAACCAGTTATTGTTGGTATATGAGTACATGGAGAACAATAGCCTTGCTCGCGCTTTGTACGGTCCAGAGGATGATCTTTTAAACTTGGACTGGTCTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCACGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATGTGTTACTGGACCAAGACCTCAATGCTAAGATCTCGGACTTTGGTCTGGCCAAGCTTGATGAAGAGGAGAAAACTCATATTAGCACCAAGGTTGCTGGAACTATAGGATACATGGCACCGGAATATGCTCTATGGGGTTTTTTGACCTTTAAAGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACACGAAATATCGACCCAATGAGAACATTCAATGTTTTATGGACTGGGCCCTTGTTTTGCAACAAAGAGGGAACTTACTGGAGCTGGTAGATCCGAGGTTGGGGTCCGATTTCAGTAAGAAAGAGGCGATTAGAATGATCAAAGTAGCTCTACTGTGCGCCAATCCAACAGCTGCACTTAGGCCTATCATGTCTGCAGTAGTGAGTATGCTTGAAGGGCGGACCCCCGTGGATGAAGTGGTTCTGGATCCAAGTATCTATGGTGATGAAATGACGAGGTTAAGAGCCTTCGAAGACCAGTTTGATCACAGTACTGCACAAGGGAGCTCCCCAAGTGGAAGTCATGGCCTCATTCGTTCATCAGATGCACCATGGACCGGTTCTTCTGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

533

Amino Acids

59.59

Weight (kDa)

8.35

Isoelectric Point (pI)

30.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	2 - 115	3.5e-26	Malectin domain
Pkinase	PF00069	194 - 398	2.5e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	195 - 401	3.1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1081
AccI	GTMKAC	3 cut(s)	615, 866, 1128
AccII	CGCG	1 cut(s)	822
AciI	CCGC	3 cut(s)	107, 239, 1393
AclWI	GGATC	5 cut(s)	525, 569, 1259, 1415, 1428
AcoI	YGGCCR	1 cut(s)	1014
AcsI	RAATTY	1 cut(s)	692
AcuI	CTGAAG	1 cut(s)	1560
AfaI	GTAC	7 cut(s)	20, 625, 640, 797, 830, 942, 1486
AfiI	CCNNNNNNNGG	3 cut(s)	314, 1274, 1550
AgeI	ACCGGT	1 cut(s)	1550
AgsI	TTSAA	5 cut(s)	364, 669, 767, 1205, 1388
AjuI	GAANNNNNNNTTGG	2 cut(s)	588, 620
AluBI	AGCT	7 cut(s)	416, 557, 1021, 1258, 1322, 1346, 1500
AluI	AGCT	7 cut(s)	416, 557, 1021, 1258, 1322, 1346, 1500
Alw21I	GWGCWC	1 cut(s)	1502
Alw26I	GTCTC	2 cut(s)	224, 942
AlwI	GGATC	5 cut(s)	525, 569, 1259, 1415, 1428
AoxI	GGCC	4 cut(s)	1014, 1221, 1355, 1519
ApaI	GGGCCC	1 cut(s)	1225
ApeKI	GCWGC	3 cut(s)	197, 557, 1346
ApoI	RAATTY	1 cut(s)	692
AsiGI	ACCGGT	1 cut(s)	1550
Asp700I	GAANNNNTTC	2 cut(s)	501, 1413
AspA2I	CCTAGG	1 cut(s)	886
AspLEI	GCGC	2 cut(s)	824, 1334
AspS9I	GGNCC	9 cut(s)	326, 608, 833, 976, 1221, 1222, 1278, 1395, 1548
AsuHPI	GGTGA	2 cut(s)	529, 1448
AsuII	TTCGAA	1 cut(s)	1464
AvaII	GGWCC	7 cut(s)	326, 608, 833, 976, 1278, 1395, 1548
AvrII	CCTAGG	1 cut(s)	886
BaeGI	GKGCMC	1 cut(s)	1225
BalI	TGGCCA	1 cut(s)	1016
BamHI	GGATCC	1 cut(s)	1420
BanI	GGYRCC	1 cut(s)	1081
BanII	GRGCYC	2 cut(s)	1225, 1502
BauI	CACGAG	1 cut(s)	917
BbsI	GAAGAC	3 cut(s)	157, 1473, 1566
Bbv12I	GWGCWC	1 cut(s)	1502
BbvI	GCAGC	3 cut(s)	209, 544, 1333
BccI	CCATC	2 cut(s)	71, 629
BcgI	CGANNNNNNTGC	2 cut(s)	668, 702
BciVI	GTATCC	1 cut(s)	1067
BclI	TGATCA	2 cut(s)	1311, 1477
BcoDI	GTCTC	2 cut(s)	224, 942
BfaI	CTAG	2 cut(s)	263, 887
BfmI	CTRYAG	3 cut(s)	1068, 1129, 1368
BfuI	GTATCC	1 cut(s)	1067
BglII	AGATCT	3 cut(s)	131, 996, 1579
BisI	GCNGC	3 cut(s)	198, 558, 1347
BlnI	CCTAGG	1 cut(s)	886
BlsI	GCNGC	3 cut(s)	199, 559, 1348
BmcAI	AGTACT	1 cut(s)	1486
Bme18I	GGWCC	7 cut(s)	326, 608, 833, 976, 1278, 1395, 1548
BmgT120I	GGNCC	9 cut(s)	326, 608, 833, 976, 1221, 1222, 1278, 1395, 1548
BmiI	GGNNCC	7 cut(s)	328, 610, 1083, 1223, 1279, 1397, 1422
BmrI	ACTGGG	1 cut(s)	1228
BmsI	GCATC	1 cut(s)	1528
BmuI	ACTGGG	1 cut(s)	1228
BoxI	GACNNNNGTC	1 cut(s)	1008
BpiI	GAAGAC	3 cut(s)	157, 1473, 1566
BpmI	CTGGAG	1 cut(s)	1274
Bpu14I	TTCGAA	1 cut(s)	1464
BpuEI	CTTGAG	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	116
BsaJI	CCNNGG	7 cut(s)	121, 308, 886, 1053, 1268, 1401, 1544
BsaWI	WCCGGW	2 cut(s)	1084, 1550
BsaXI	ACNNNNNCTCC	4 cut(s)	393, 405, 423, 435
Bsc4I	CCNNNNNNNGG	3 cut(s)	314, 1274, 1550
Bse118I	RCCGGY	1 cut(s)	1550
Bse1I	ACTGG	8 cut(s)	519, 532, 775, 866, 978, 1223, 1257, 1471
Bse3DI	GCAATG	1 cut(s)	186
Bse8I	GATNNNNATC	1 cut(s)	116
BseDI	CCNNGG	7 cut(s)	121, 308, 886, 1053, 1268, 1401, 1544
BseGI	GGATG	5 cut(s)	640, 730, 761, 847, 1411
BseJI	GATNNNNATC	1 cut(s)	116
BseLI	CCNNNNNNNGG	3 cut(s)	314, 1274, 1550
BseMI	GCAATG	1 cut(s)	186
BseMII	CTCAG	2 cut(s)	348, 497
BseNI	ACTGG	8 cut(s)	519, 532, 775, 866, 978, 1223, 1257, 1471
BseRI	GAGGAG	3 cut(s)	30, 330, 1046
BseSI	GKGCMC	1 cut(s)	1225
BseXI	GCAGC	3 cut(s)	209, 544, 1333
BsgI	GTGCAG	2 cut(s)	1332, 1473
Bsh1236I	CGCG	1 cut(s)	822
BshFI	GGCC	4 cut(s)	1016, 1223, 1357, 1521
BshNI	GGYRCC	1 cut(s)	1081
BshTI	ACCGGT	1 cut(s)	1550
BsiHKAI	GWGCWC	1 cut(s)	1502
BsiSI	CCGG	2 cut(s)	1085, 1551
BslFI	GGGAC	3 cut(s)	307, 312, 594
BslI	CCNNNNNNNGG	3 cut(s)	314, 1274, 1550
BsmAI	GTCTC	2 cut(s)	224, 942
BsmFI	GGGAC	3 cut(s)	307, 312, 594
BsmI	GAATGC	1 cut(s)	31
BsnI	GGCC	4 cut(s)	1016, 1223, 1357, 1521
Bsp119I	TTCGAA	1 cut(s)	1464
Bsp120I	GGGCCC	1 cut(s)	1221
Bsp1286I	GDGCHC	2 cut(s)	1225, 1502
Bsp1407I	TGTACA	2 cut(s)	18, 940
Bsp19I	CCATGG	1 cut(s)	1544
BspACI	CCGC	3 cut(s)	107, 239, 1393
BspANI	GGCC	4 cut(s)	1016, 1223, 1357, 1521
BspCNI	CTCAG	3 cut(s)	4, 349, 498
BspFNI	CGCG	1 cut(s)	822
BspLI	GGNNCC	7 cut(s)	328, 610, 1083, 1223, 1279, 1397, 1422
BspMAI	CTGCAG	1 cut(s)	1372
BspPI	GGATC	5 cut(s)	525, 569, 1259, 1415, 1428
BspT104I	TTCGAA	1 cut(s)	1464
BspT107I	GGYRCC	1 cut(s)	1081
BsrDI	GCAATG	1 cut(s)	186
BsrFI	RCCGGY	1 cut(s)	1550
BsrGI	TGTACA	2 cut(s)	18, 940
BsrI	ACTGG	8 cut(s)	519, 532, 775, 866, 978, 1223, 1257, 1471
BssAI	RCCGGY	1 cut(s)	1550
BssECI	CCNNGG	7 cut(s)	121, 308, 886, 1053, 1268, 1401, 1544
BssSI	CACGAG	1 cut(s)	917
BssT1I	CCWWGG	4 cut(s)	308, 886, 1053, 1544
Bst2BI	CACGAG	1 cut(s)	917
Bst4CI	ACNGT	8 cut(s)	91, 143, 421, 833, 1133, 1159, 1329, 1484
Bst6I	CTCTTC	1 cut(s)	1023
BstAUI	TGTACA	2 cut(s)	18, 940
BstBI	TTCGAA	1 cut(s)	1464
BstC8I	GCNNGC	2 cut(s)	31, 820
BstDEI	CTNAG	6 cut(s)	12, 71, 357, 506, 993, 1352
BstDSI	CCRYGG	2 cut(s)	1401, 1544
BstF5I	GGATG	5 cut(s)	640, 730, 761, 847, 1411
BstFNI	CGCG	1 cut(s)	822
BstHHI	GCGC	2 cut(s)	824, 1334
BstMAI	GTCTC	2 cut(s)	224, 942
BstMWI	GCNNNNNNNGC	3 cut(s)	197, 819, 1390
BstPAI	GACNNNNGTC	1 cut(s)	1008
BstSFI	CTRYAG	3 cut(s)	1068, 1129, 1368
BstSLI	GKGCMC	1 cut(s)	1225
BstUI	CGCG	1 cut(s)	822
BstV1I	GCAGC	3 cut(s)	209, 544, 1333
BstV2I	GAAGAC	3 cut(s)	157, 1473, 1566
BstX2I	RGATCY	6 cut(s)	131, 517, 996, 1264, 1420, 1579
BstYI	RGATCY	6 cut(s)	131, 517, 996, 1264, 1420, 1579
BsuI	GTATCC	1 cut(s)	1067
BsuRI	GGCC	4 cut(s)	1016, 1223, 1357, 1521
BtgI	CCRYGG	2 cut(s)	1401, 1544
BtsCI	GGATG	5 cut(s)	640, 730, 761, 847, 1411
BtsI	GCAGTG	1 cut(s)	936
BtsIMutI	CAGTG	2 cut(s)	148, 936
Cac8I	GCNNGC	2 cut(s)	31, 820
CfoI	GCGC	2 cut(s)	824, 1334
Cfr10I	RCCGGY	1 cut(s)	1550
Cfr13I	GGNCC	9 cut(s)	326, 608, 833, 976, 1221, 1222, 1278, 1395, 1548
Csp6I	GTAC	7 cut(s)	19, 624, 639, 796, 829, 941, 1485
CspAI	ACCGGT	1 cut(s)	1550
CviAII	CATG	6 cut(s)	712, 799, 1078, 1363, 1517, 1545
CviQI	GTAC	7 cut(s)	19, 624, 639, 796, 829, 941, 1485
DdeI	CTNAG	6 cut(s)	12, 71, 357, 506, 993, 1352
DraI	TTTAAA	2 cut(s)	852, 1117
EaeI	YGGCCR	1 cut(s)	1014
Eam1104I	CTCTTC	1 cut(s)	1023
EarI	CTCTTC	1 cut(s)	1023
EciI	GGCGGA	1 cut(s)	1408
Ecl136II	GAGCTC	1 cut(s)	1500
Eco130I	CCWWGG	4 cut(s)	308, 886, 1053, 1544
Eco147I	AGGCCT	1 cut(s)	1357
Eco24I	GRGCYC	2 cut(s)	1225, 1502
Eco47I	GGWCC	7 cut(s)	326, 608, 833, 976, 1278, 1395, 1548
Eco53kI	GAGCTC	1 cut(s)	1500
Eco57I	CTGAAG	1 cut(s)	1560
EcoICRI	GAGCTC	1 cut(s)	1500
EcoO109I	RGGNCCY	1 cut(s)	1222
EcoT14I	CCWWGG	4 cut(s)	308, 886, 1053, 1544
EcoT38I	GRGCYC	2 cut(s)	1225, 1502
ErhI	CCWWGG	4 cut(s)	308, 886, 1053, 1544
FaeI	CATG	6 cut(s)	715, 802, 1081, 1366, 1520, 1548
FaqI	GGGAC	3 cut(s)	307, 312, 594
FatI	CATG	6 cut(s)	711, 798, 1077, 1362, 1516, 1544
FbaI	TGATCA	2 cut(s)	1311, 1477
FblI	GTMKAC	3 cut(s)	615, 866, 1128
Fnu4HI	GCNGC	3 cut(s)	198, 558, 1347
FokI	GGATG	5 cut(s)	647, 717, 768, 854, 1418
FriOI	GRGCYC	2 cut(s)	1225, 1502
Fsp4HI	GCNGC	3 cut(s)	198, 558, 1347
FspBI	CTAG	2 cut(s)	263, 887
GlaI	GCGC	2 cut(s)	823, 1333
GluI	GCNGC	3 cut(s)	198, 558, 1347
GsuI	CTGGAG	1 cut(s)	1274
HaeIII	GGCC	4 cut(s)	1016, 1223, 1357, 1521
HapII	CCGG	2 cut(s)	1085, 1551
HhaI	GCGC	2 cut(s)	824, 1334
Hin1II	CATG	6 cut(s)	715, 802, 1081, 1366, 1520, 1548
Hin6I	GCGC	2 cut(s)	822, 1332
HinP1I	GCGC	2 cut(s)	822, 1332
HindIII	AAGCTT	1 cut(s)	1019
HinfI	GANTC	3 cut(s)	268, 318, 923
HpaII	CCGG	2 cut(s)	1085, 1551
HphI	GGTGA	2 cut(s)	529, 1448
Hpy166II	GTNNAC	5 cut(s)	21, 616, 700, 867, 1129
Hpy188I	TCNGA	9 cut(s)	13, 122, 358, 507, 1003, 1269, 1282, 1537, 1579
Hpy188III	TCNNGA	5 cut(s)	176, 263, 689, 836, 1418
Hpy8I	GTNNAC	5 cut(s)	21, 616, 700, 867, 1129
HpyAV	CCTTC	5 cut(s)	187, 590, 928, 1382, 1471
HpyCH4III	ACNGT	8 cut(s)	91, 143, 421, 833, 1133, 1159, 1329, 1484
HpyCH4IV	ACGT	2 cut(s)	165, 1571
HpyF10VI	GCNNNNNNNGC	3 cut(s)	197, 819, 1390
HpyF3I	CTNAG	6 cut(s)	12, 71, 357, 506, 993, 1352
HpySE526I	ACGT	2 cut(s)	165, 1571
Hsp92II	CATG	6 cut(s)	715, 802, 1081, 1366, 1520, 1548
HspAI	GCGC	2 cut(s)	822, 1332
Ksp22I	TGATCA	2 cut(s)	1311, 1477
LmnI	GCTCC	4 cut(s)	413, 1255, 1497, 1505
Lsp1109I	GCAGC	3 cut(s)	209, 544, 1333
LweI	GCATC	1 cut(s)	1528
MaeI	CTAG	2 cut(s)	263, 887
MaeII	ACGT	2 cut(s)	165, 1571
MaeIII	GTNAC	2 cut(s)	969, 1561
MboII	GAAGA	8 cut(s)	162, 427, 509, 657, 1040, 1478, 1548, 1566
MflI	RGATCY	6 cut(s)	131, 517, 996, 1264, 1420, 1579
MhlI	GDGCHC	2 cut(s)	1225, 1502
MlsI	TGGCCA	1 cut(s)	1016
MluCI	AATT	6 cut(s)	82, 441, 549, 588, 645, 692
MluNI	TGGCCA	1 cut(s)	1016
MlyI	GAGTC	1 cut(s)	327
MmeI	TCCRAC	4 cut(s)	127, 379, 391, 1364
Mox20I	TGGCCA	1 cut(s)	1016
MroXI	GAANNNNTTC	2 cut(s)	501, 1413
MscI	TGGCCA	1 cut(s)	1016
MseI	TTAA	9 cut(s)	225, 249, 440, 552, 654, 851, 1116, 1454, 1600
Msp20I	TGGCCA	1 cut(s)	1016
MspA1I	CMGCKG	1 cut(s)	1346
MspI	CCGG	2 cut(s)	1085, 1551
Mva1269I	GAATGC	1 cut(s)	31
MvnI	CGCG	1 cut(s)	822
MwoI	GCNNNNNNNGC	3 cut(s)	197, 819, 1390
NcoI	CCATGG	1 cut(s)	1544
NlaIII	CATG	6 cut(s)	715, 802, 1081, 1366, 1520, 1548
NlaIV	GGNNCC	7 cut(s)	328, 610, 1083, 1223, 1279, 1397, 1422
NspV	TTCGAA	1 cut(s)	1464
PceI	AGGCCT	1 cut(s)	1357
PctI	GAATGC	1 cut(s)	31
PdmI	GAANNNNTTC	2 cut(s)	501, 1413
PfeI	GAWTC	2 cut(s)	268, 923
PinAI	ACCGGT	1 cut(s)	1550
PkrI	GCNGC	3 cut(s)	199, 559, 1348
PleI	GAGTC	1 cut(s)	326
PpsI	GAGTC	1 cut(s)	326
PshAI	GACNNNNGTC	1 cut(s)	1008
Psp124BI	GAGCTC	1 cut(s)	1502
PspN4I	GGNNCC	7 cut(s)	328, 610, 1083, 1223, 1279, 1397, 1422
PspOMI	GGGCCC	1 cut(s)	1221
PspPI	GGNCC	9 cut(s)	326, 608, 833, 976, 1221, 1222, 1278, 1395, 1548
PstI	CTGCAG	1 cut(s)	1372
PsuI	RGATCY	6 cut(s)	131, 517, 996, 1264, 1420, 1579
PvuII	CAGCTG	1 cut(s)	1346
RsaI	GTAC	7 cut(s)	20, 625, 640, 797, 830, 942, 1486
RsaNI	GTAC	7 cut(s)	19, 624, 639, 796, 829, 941, 1485
SacI	GAGCTC	1 cut(s)	1502
SaqAI	TTAA	9 cut(s)	225, 249, 440, 552, 654, 851, 1116, 1454, 1600
SatI	GCNGC	3 cut(s)	198, 558, 1347
Sau96I	GGNCC	9 cut(s)	326, 608, 833, 976, 1221, 1222, 1278, 1395, 1548
ScaI	AGTACT	1 cut(s)	1486
SchI	GAGTC	1 cut(s)	327
SduI	GDGCHC	2 cut(s)	1225, 1502
SfaNI	GCATC	1 cut(s)	1528
SfcI	CTRYAG	3 cut(s)	1068, 1129, 1368
SfuI	TTCGAA	1 cut(s)	1464
SinI	GGWCC	7 cut(s)	326, 608, 833, 976, 1278, 1395, 1548
SmlI	CTYRAG	1 cut(s)	541
SmoI	CTYRAG	1 cut(s)	541
Sse9I	AATT	6 cut(s)	82, 441, 549, 588, 645, 692
SseBI	AGGCCT	1 cut(s)	1357
SsiI	CCGC	3 cut(s)	107, 239, 1393
SspMI	CTAG	2 cut(s)	263, 887
SstI	GAGCTC	1 cut(s)	1502
StuI	AGGCCT	1 cut(s)	1357
StyI	CCWWGG	4 cut(s)	308, 886, 1053, 1544
TaaI	ACNGT	8 cut(s)	91, 143, 421, 833, 1133, 1159, 1329, 1484
TaiI	ACGT	2 cut(s)	168, 1574
TaqI	TCGA	3 cut(s)	674, 1186, 1464
TasI	AATT	6 cut(s)	82, 441, 549, 588, 645, 692
TatI	WGTACW	4 cut(s)	18, 795, 940, 1484
TfiI	GAWTC	2 cut(s)	268, 923
Tru1I	TTAA	9 cut(s)	225, 249, 440, 552, 654, 851, 1116, 1454, 1600
Tru9I	TTAA	9 cut(s)	225, 249, 440, 552, 654, 851, 1116, 1454, 1600
TscAI	CASTG	2 cut(s)	148, 936
TseI	GCWGC	3 cut(s)	197, 557, 1346
TspDTI	ATGAA	7 cut(s)	17, 89, 266, 1041, 1422, 1455, 1521
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	2 cut(s)	148, 936
VpaK11BI	GGWCC	7 cut(s)	326, 608, 833, 976, 1278, 1395, 1548
XapI	RAATTY	1 cut(s)	692
XbaI	TCTAGA	1 cut(s)	262
XmaJI	CCTAGG	1 cut(s)	886
XmiI	GTMKAC	3 cut(s)	615, 866, 1128
XmnI	GAANNNNTTC	2 cut(s)	501, 1413
XspI	CTAG	2 cut(s)	263, 887
ZrmI	AGTACT	1 cut(s)	1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.