Rmu_sc0009761.1_g000006

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009761.1
Physical Location & Seq
Forward (+)
27295 .. 27860
566 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009761.1_g000006.1.cds

Sequence Viewer

Length: 372 bp
atgttgagaactttgtctcaggataaactatggtggaaggacttcaatattgaagatcaggccaagttggctgaaactccagtagtaatacaacataatatcagtgtgacaaataatgtcttagagatccgattctattttgcgggtaaagggacaacgagaattcctgacagaggagtttatggtccccttgtctctgctatttcagtgaagtctgattccaaaccttgctcaactggtggaaataagggaactactcaaattgtcattggggttgtagtaggagcactatgcctagtagttcttgttttaggaatcctatggtggagaggcaacttaccaggaaaactgggcagacagaaaggtacttga

Protein Analysis

123

Amino Acids

13.42

Weight (kDa)

9.8

Isoelectric Point (pI)

27.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 143
AclWI GGATC 1 cut(s) 121
AcsI RAATTY 1 cut(s) 162
AfaI GTAC 1 cut(s) 367
AfiI CCNNNNNNNGG 1 cut(s) 173
AgsI TTSAA 2 cut(s) 46, 53
AjnI CCWGG 1 cut(s) 340
Alw21I GWGCWC 1 cut(s) 289
Alw26I GTCTC 2 cut(s) 21, 199
AlwI GGATC 1 cut(s) 121
AoxI GGCC 1 cut(s) 60
ApoI RAATTY 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 41
AspS9I GGNCC 1 cut(s) 185
AvaII GGWCC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 289
BciT130I CCWGG 1 cut(s) 342
BcoDI GTCTC 2 cut(s) 21, 199
BfaI CTAG 1 cut(s) 296
BglI GCCNNNNNGGC 1 cut(s) 68
Bme1390I CCNGG 1 cut(s) 342
Bme18I GGWCC 1 cut(s) 185
BmgT120I GGNCC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 187
BmrFI CCNGG 1 cut(s) 342
BmrI ACTGGG 1 cut(s) 359
BmuI ACTGGG 1 cut(s) 359
BpmI CTGGAG 1 cut(s) 63
Bsc4I CCNNNNNNNGG 1 cut(s) 173
Bse1I ACTGG 3 cut(s) 80, 241, 354
BseBI CCWGG 1 cut(s) 342
BseLI CCNNNNNNNGG 1 cut(s) 173
BseMII CTCAG 1 cut(s) 32
BseNI ACTGG 3 cut(s) 80, 241, 354
BseRI GAGGAG 1 cut(s) 189
BshFI GGCC 1 cut(s) 62
BsiHKAI GWGCWC 1 cut(s) 289
BslFI GGGAC 2 cut(s) 166, 171
BslI CCNNNNNNNGG 1 cut(s) 173
BsmAI GTCTC 2 cut(s) 21, 199
BsmFI GGGAC 2 cut(s) 166, 171
BsnI GGCC 1 cut(s) 62
Bsp1286I GDGCHC 1 cut(s) 289
Bsp143I GATC 2 cut(s) 55, 126
BspACI CCGC 1 cut(s) 143
BspANI GGCC 1 cut(s) 62
BspCNI CTCAG 1 cut(s) 31
BspLI GGNNCC 1 cut(s) 187
BspPI GGATC 1 cut(s) 121
BsrI ACTGG 3 cut(s) 80, 241, 354
BssMI GATC 2 cut(s) 55, 126
Bst2UI CCWGG 1 cut(s) 342
BstDEI CTNAG 2 cut(s) 18, 121
BstENI CCTNNNNNAGG 1 cut(s) 171
BstKTI GATC 2 cut(s) 58, 129
BstMAI GTCTC 2 cut(s) 21, 199
BstMBI GATC 2 cut(s) 55, 126
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstNI CCWGG 1 cut(s) 342
BstSCI CCNGG 1 cut(s) 340
BstX2I RGATCY 1 cut(s) 126
BstYI RGATCY 1 cut(s) 126
BsuRI GGCC 1 cut(s) 62
BtsIMutI CAGTG 2 cut(s) 109, 213
Cfr13I GGNCC 1 cut(s) 185
Csp6I GTAC 1 cut(s) 366
CviJI RGCY 2 cut(s) 62, 71
CviKI_1 RGCY 2 cut(s) 62, 71
CviQI GTAC 1 cut(s) 366
DdeI CTNAG 2 cut(s) 18, 121
DpnI GATC 2 cut(s) 57, 128
DpnII GATC 2 cut(s) 55, 126
Eco47I GGWCC 1 cut(s) 185
EcoNI CCTNNNNNAGG 1 cut(s) 171
EcoRI GAATTC 1 cut(s) 162
EcoRII CCWGG 1 cut(s) 340
FaiI YATR 5 cut(s) 31, 96, 183, 292, 322
FaqI GGGAC 2 cut(s) 166, 171
FauI CCCGC 1 cut(s) 136
FspBI CTAG 1 cut(s) 296
GsuI CTGGAG 1 cut(s) 63
HaeIII GGCC 1 cut(s) 62
HinfI GANTC 3 cut(s) 132, 218, 315
Hpy188I TCNGA 2 cut(s) 131, 217
Hpy188III TCNNGA 2 cut(s) 20, 167
HpyAV CCTTC 1 cut(s) 31
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 2 cut(s) 18, 121
Kzo9I GATC 2 cut(s) 55, 126
LmnI GCTCC 1 cut(s) 284
LpnPI CCDG 8 cut(s) 5, 44, 93, 180, 222, 327, 335, 354
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 1 cut(s) 106
MalI GATC 2 cut(s) 57, 128
MboI GATC 2 cut(s) 55, 126
MboII GAAGA 1 cut(s) 65
MflI RGATCY 1 cut(s) 126
MhlI GDGCHC 1 cut(s) 289
MluCI AATT 2 cut(s) 162, 261
MnlI CCTC 2 cut(s) 167, 323
MroXI GAANNNNTTC 1 cut(s) 41
MspR9I CCNGG 1 cut(s) 342
MvaI CCWGG 1 cut(s) 342
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeII GATC 2 cut(s) 55, 126
NlaIV GGNNCC 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 3 cut(s) 132, 218, 315
Psp6I CCWGG 1 cut(s) 340
PspGI CCWGG 1 cut(s) 340
PspN4I GGNNCC 1 cut(s) 187
PspPI GGNCC 1 cut(s) 185
PsuI RGATCY 1 cut(s) 126
RsaI GTAC 1 cut(s) 367
RsaNI GTAC 1 cut(s) 366
Sau3AI GATC 2 cut(s) 55, 126
Sau96I GGNCC 1 cut(s) 185
ScrFI CCNGG 1 cut(s) 342
SduI GDGCHC 1 cut(s) 289
SetI ASST 2 cut(s) 229, 367
SinI GGWCC 1 cut(s) 185
Sse9I AATT 2 cut(s) 162, 261
SsiI CCGC 1 cut(s) 143
SspI AATATT 1 cut(s) 49
SspMI CTAG 1 cut(s) 296
StyD4I CCNGG 1 cut(s) 340
TasI AATT 2 cut(s) 162, 261
TfiI GAWTC 3 cut(s) 132, 218, 315
TscAI CASTG 2 cut(s) 109, 213
TseFI GTSAC 1 cut(s) 106
Tsp45I GTSAC 1 cut(s) 106
TspRI CASTG 2 cut(s) 109, 213
VpaK11BI GGWCC 1 cut(s) 185
XagI CCTNNNNNAGG 1 cut(s) 171
XapI RAATTY 1 cut(s) 162
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.