MD05G1294800.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
42717763 .. 42719559
1797 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1294800.v1.1.491

Sequence Viewer

Length: 288 bp
ATGTTCAAAAGGATTGTGTATCGGTACTCGTTACATCTAAATTGCGGTGGAAATCAAACCACAGTCGGAAACATCAAGTATGAGGCAGATGACGCCCCAGGAGGTGCAGCAAAGTTTTTTCAGAACTCAGCAAATTGGGGATTTAGTAGTACTGGTGATTTGGCTGATGTTGAGACCTATGGCAAAGACTATATCGCTAATAATATTTCGATACTCAGAATGAACAACTCTGAATTGTACAAAACTGCACGACTGTCTCCTCTTTCACTCACATATTTGCACAATTGA

Protein Analysis

96

Amino Acids

10.6

Weight (kDa)

7.85

Isoelectric Point (pI)

23.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 10 - 93 1.2e-07 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 45
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 3 cut(s) 26, 151, 239
AgsI TTSAA 1 cut(s) 7
AjnI CCWGG 1 cut(s) 97
Alw26I GTCTC 2 cut(s) 167, 261
ApeKI GCWGC 1 cut(s) 107
AsuHPI GGTGA 1 cut(s) 167
BbvI GCAGC 1 cut(s) 119
BciT130I CCWGG 1 cut(s) 99
BcoDI GTCTC 2 cut(s) 167, 261
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
BmcAI AGTACT 1 cut(s) 151
Bme1390I CCNGG 1 cut(s) 99
BmrFI CCNGG 1 cut(s) 99
BsaHI GRCGYC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 1 cut(s) 97
Bse1I ACTGG 1 cut(s) 157
BseBI CCWGG 1 cut(s) 99
BseDI CCNNGG 1 cut(s) 97
BseMII CTCAG 2 cut(s) 141, 229
BseNI ACTGG 1 cut(s) 157
BseRI GAGGAG 1 cut(s) 249
BseXI GCAGC 1 cut(s) 119
BsgI GTGCAG 2 cut(s) 126, 231
BsmAI GTCTC 2 cut(s) 167, 261
Bso31I GGTCTC 1 cut(s) 167
Bsp1407I TGTACA 1 cut(s) 237
BspACI CCGC 1 cut(s) 45
BspCNI CTCAG 2 cut(s) 140, 228
BspTNI GGTCTC 1 cut(s) 167
BsrGI TGTACA 1 cut(s) 237
BsrI ACTGG 1 cut(s) 157
BssECI CCNNGG 1 cut(s) 97
BssNI GRCGYC 1 cut(s) 93
Bst2UI CCWGG 1 cut(s) 99
Bst4CI ACNGT 2 cut(s) 64, 255
BstACI GRCGYC 1 cut(s) 93
BstAUI TGTACA 1 cut(s) 237
BstDEI CTNAG 2 cut(s) 127, 215
BstMAI GTCTC 2 cut(s) 167, 261
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstNI CCWGG 1 cut(s) 99
BstSCI CCNGG 1 cut(s) 97
BstV1I GCAGC 1 cut(s) 119
CseI GACGC 1 cut(s) 101
Csp6I GTAC 3 cut(s) 25, 150, 238
CviJI RGCY 1 cut(s) 164
CviKI_1 RGCY 1 cut(s) 164
CviQI GTAC 3 cut(s) 25, 150, 238
DdeI CTNAG 2 cut(s) 127, 215
Eco31I GGTCTC 1 cut(s) 167
EcoRII CCWGG 1 cut(s) 97
FaiI YATR 4 cut(s) 81, 180, 192, 274
Fnu4HI GCNGC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 108
HgaI GACGC 1 cut(s) 101
Hin1I GRCGYC 1 cut(s) 93
HphI GGTGA 1 cut(s) 167
Hpy188I TCNGA 4 cut(s) 68, 123, 218, 232
HpyCH4III ACNGT 2 cut(s) 64, 255
HpyCH4V TGCA 3 cut(s) 107, 248, 280
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
HpyF3I CTNAG 2 cut(s) 127, 215
Hsp92I GRCGYC 1 cut(s) 93
LpnPI CCDG 3 cut(s) 84, 111, 138
Lsp1109I GCAGC 1 cut(s) 119
MaeIII GTNAC 1 cut(s) 30
MfeI CAATTG 1 cut(s) 283
MluCI AATT 4 cut(s) 40, 133, 233, 283
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 3 cut(s) 76, 95, 270
MspR9I CCNGG 1 cut(s) 99
MunI CAATTG 1 cut(s) 283
MvaI CCWGG 1 cut(s) 99
MwoI GCNNNNNNNGC 1 cut(s) 92
PkrI GCNGC 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 97
PspGI CCWGG 1 cut(s) 97
RsaI GTAC 3 cut(s) 26, 151, 239
RsaNI GTAC 3 cut(s) 25, 150, 238
SatI GCNGC 1 cut(s) 108
ScaI AGTACT 1 cut(s) 151
ScrFI CCNGG 1 cut(s) 99
SetI ASST 2 cut(s) 106, 179
SgeI CNNG 6 cut(s) 40, 88, 110, 111, 165, 261
Sse9I AATT 4 cut(s) 40, 133, 233, 283
SsiI CCGC 1 cut(s) 45
SspI AATATT 1 cut(s) 205
StyD4I CCNGG 1 cut(s) 97
TaaI ACNGT 2 cut(s) 64, 255
TaqI TCGA 1 cut(s) 209
TasI AATT 4 cut(s) 40, 133, 233, 283
TatI WGTACW 2 cut(s) 149, 237
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 1 cut(s) 236
ZrmI AGTACT 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.