RchiOBHm_Chr5g0012321

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8290102 .. 8296451
6350 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29290

Sequence Viewer

Length: 3000 bp
ATGGTAAGAATTAACAACCCAGAGGAGATGGTCATCTTCTTCGTAGTGGTCATTTGCATGGCACAAGTCATATTTGAAGCACAGGCCATGACTCTTCCAGCTGATGAGGTGCAAGCCCTTCATGAAATTGCTGAGCAACTGAACAAAAAGGACTGGAATTTGAGCGACCCATGTAGAAATATTCCAACTTTCTCAATGCCACATACGGATCAGTACATGAACACCCTCTTCTGCAACTGTTCTTTCTCTGGCAATGTGTGCCATGTCCAAACCATTTTTCTTGTGGGTCAGGACCTGGATGGTGTGCTTCCACCATCACTGGTGAAGCTGCCTTACCTCAAGGAACTTAATCTGGGTCAGAATTACCTTAGTGGCTCAATTCCACCAGAATGGGGCTCTACCAAGTTGGAATTTCTTGTTCTCAGTGTGAACAACTTATCAGGACCTATCCCTGCCTATTTGGGGAACATAACTACTCTCCGAGCTTTGGCCTTGGAAAGCAACTTATTTTCTGGAAGTATTCCACCGGAGATGGGAAGATTGATTAACATGGAAGTCCTCTACCTTCGAGCTAACAATCTCACTGGACAGTTGCCTGTGGCTCTCACTAATATGACCAAATTAAAAACACTTTGGATTGGCAGTAACAACTTCACTGGAAAAATTCCGAACTATTTTCTTAATTGGAAAGAACTTCAGATGTTAGAGATGCAAGCGAGTGGCTTTGAAGGGCCCATTCCTTCTACTCTTTCTGCCTTAAGTAATATGACATACTTAGTAATCAGTGACTTAAGCGGAGAGAGCTCAAGTTTTCCAAACTTGTCGAACATGAAAAACATGCAGAAATTGATGTTAAGGAGCTGCAATATAACAGGATCAATTCCAGAATATATATCTAACATGACAAGCTTGCAAGTTTTAGATCTTAGCTTCAACAGATTGAAAGGGAGTATCCCAAATCTTGACAAGTTATTAGGATTGGCCACAATATATCTGACAAGTAACTGGCTTACTGGGCTTCCGGAGTGGATCAAAAATAGAGATAGCCGCTACATAATAGATCTTTCTTACAACAATTTTTCAAGGGACTCTGTCCCAACTACATGTCGAGAAACCTTTAATGTGTTCAAAAGTTTCTCCAGACAGAACAACTCAATTCTTTGCAATTGCCTCTATCCATGTTCAAAAGAACAGTATTCATTGCATATTAATTGTGGTGGAAAACCAACCACCATTGGAAGCATCAAGTACGAGGGGGATGAAGCCTCGGGAGGTGGAGCAAAGTTTTTTCGGGACACAGTTAATTGGGGATTTAGTAGCACTGGTGATTATGGGATTATGAATTTTGACCAAGCCTACATAGCAAACAATGTTTCCATACTCAAAATGAACAACTCGGAATTGTACAGAACTGCCCGCCTTTCTTTTCTTTCACTCACATATTATGCTCGTTGCTTAGCAAATGGAAATTACACTGTGAAACTACACTTTGCAGAAATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGATTTTTTGATGTCTATATTCAGGAAAAACTGGTATTGAAGGATTTTAATATTAAAAAGGAAGCACAGGGGGTTGATAAGGAAGTGATTAAAGTATTTAAAGCAGTTGTCAATGTTAGCACTTTAGAGATCCGTTTTTATTGGGCTGGGAAAGGGACAGCTAATGCCCCAAAGAGAGGGACATATGGTTCACTTATATCGGCTATCTCAGTTGAGTCGGATTTTAAGCCACCTGGTGATAGCAACAGGAAAATATTCATAGCGGTTGGAGTTGCTTTATTCTTATGCCTCATCTTCATGGTTTTTGGCATTCTTTGGTTAAGAAGCTGCTTTGGAGGCAGGACCTCTAGGGAACAAGAGCTGAAAGGATTGGATCTGCAAACTGGACTCTTTAGATTCAAACAAATCAAAGCTGCCACTAACAACTTTGATGCTGCAAACAAGCTTGGGGAAGGTGGCTTTGGAATTGTTTACAAGGGGGAATTATTAGATCGTACTACTATTGCTGTTAAGCAACTTTCATCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAATGAAATAGGGATGATTTCTGGATTGCAACATCCAAATCTTGTTAGATTGTATGGATGTTGCATCGAAGGAAATCAGTTGTTGCTGGTATATGAATACATGGAGAACAATAGTCTTGCACATTCATTGTTTGGTCCACAAGAAGGTATACTGAAACTGGACTGGCCTAAGAGGCAAAAAATATGTATTGGCATTGCAAGAGGGCTAGCTTTCCTGCATGAGGAATCGACACTGAAAATTGTTCATAGAGATATCAAAATGACTAACATACTGCTAGATAGAGACCTAAATCCTAAAATCTCTGACTTTGGTTTGGCCAAGCTAGACGAAGAGGAGAAAACGCATATTAGCACCAGAGTAGCTGGAACTATAGGATACATGGCGCCAGAATATGCACTATGGGGTTATTTAACTGACAAAGTAGATGTTTACAGTTTTGGAGTTGTTGCATTAGAGCTCGTATCTGGAAAAAACAACATCAAATATCGACCAAATGAGAATTATGTATGCCTTCTAGATTGGGCCCTTGTTTTGCAACAAAAAGAAAACCTGATGGAGCTAGTGGATCCAAAGTTGGGATCCAAGTTCAACAAGGAAGAGGCAATGAGAATGATTAAAGTAGCTCTACTATGCACCAATCCATCACCAGCACTGAGACCTACAATGTCTGCAGCACTAAGCATGCTTGAAGGCCGAGCTCTTATTCATGAATCAAGTAGAAATCTGAGTATGTATGGTGATGAACTGGGGTTTAAGGCCCTAAGGGACGACTGTAATGATCTGAATATTCAACAGAGTCCAAGAGAGACTCAGAGCCTCATTTATTCATCCGATGCCAAAGGGCCAGATGCCTCTTCCTCAACGACTGTCCGGGATAGCTATACATTTAATCTTGATTCTCCATAG

Protein Analysis

999

Amino Acids

111.89

Weight (kDa)

7.91

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 153 - 346 7.5e-11 Leucine-rich repeat region
Malectin PF11721 400 - 582 1.7e-36 Malectin domain
Pkinase PF00069 658 - 925 7.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 659 - 923 1.1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2476
AccI GTMKAC 1 cut(s) 2242
AccIII TCCGGA 1 cut(s) 1021
AciI CCGC 4 cut(s) 795, 1048, 1417, 1802
AclWI GGATC 9 cut(s) 216, 883, 1037, 1663, 1920, 2654, 2667, 2667, 2680
AcoI YGGCCR 2 cut(s) 981, 2409
AcsI RAATTY 4 cut(s) 157, 410, 663, 1342
AcuI CTGAAG 1 cut(s) 680
AcyI GRCGYC 1 cut(s) 2477
AdeI CACNNNGTG 1 cut(s) 1775
AfaI GTAC 4 cut(s) 215, 1250, 1406, 2035
AfiI CCNNNNNNNGG 8 cut(s) 392, 462, 487, 533, 1715, 2237, 2314, 2669
AflII CTTAAG 2 cut(s) 757, 790
AflIII ACRYGT 1 cut(s) 1103
AhdI GACNNNNNGTC 1 cut(s) 1516
AjnI CCWGG 2 cut(s) 294, 1771
AjuI GAANNNNNNNTTGG 4 cut(s) 261, 293, 1983, 2015
AloI GAACNNNNNNTCC 2 cut(s) 1711, 1743
Alw21I GWGCWC 3 cut(s) 806, 2553, 2794
Alw26I GTCTC 4 cut(s) 1503, 2370, 2743, 2894
AlwI GGATC 9 cut(s) 216, 883, 1037, 1663, 1920, 2654, 2667, 2667, 2680
AlwNI CAGNNNCTG 1 cut(s) 295
Ama87I CYCGRG 1 cut(s) 1267
Aor13HI TCCGGA 1 cut(s) 1021
ApaI GGGCCC 2 cut(s) 735, 2620
ApeKI GCWGC 6 cut(s) 328, 861, 1866, 1952, 1973, 2765
ApoI RAATTY 4 cut(s) 157, 410, 663, 1342
AseI ATTAAT 1 cut(s) 1209
Asp700I GAANNNNTTC 2 cut(s) 1500, 1793
AspLEI GCGC 1 cut(s) 2479
AsuC2I CCSGG 1 cut(s) 2966
AsuHPI GGTGA 5 cut(s) 334, 1337, 1787, 2730, 2843
AsuNHI GCTAGC 1 cut(s) 2299
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 4 cut(s) 292, 443, 1881, 2228
AxyI CCTNAGG 1 cut(s) 2855
BaeGI GKGCMC 2 cut(s) 735, 2620
BalI TGGCCA 2 cut(s) 983, 2411
BamHI GGATCC 2 cut(s) 2659, 2672
BanI GGYRCC 1 cut(s) 2476
BanII GRGCYC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
BarI GAAGNNNNNNTAC 2 cut(s) 317, 349
BbsI GAAGAC 1 cut(s) 1543
Bbv12I GWGCWC 3 cut(s) 806, 2553, 2794
BbvI GCAGC 6 cut(s) 315, 848, 1853, 1939, 1960, 2777
BccI CCATC 6 cut(s) 22, 293, 322, 526, 2641, 2743
BciT130I CCWGG 2 cut(s) 296, 1773
BciVI GTATCC 2 cut(s) 962, 2462
BcnI CCSGG 1 cut(s) 2966
BcoDI GTCTC 4 cut(s) 1503, 2370, 2743, 2894
BfaI CTAG 6 cut(s) 1887, 2300, 2369, 2417, 2609, 2654
BfmI CTRYAG 2 cut(s) 2463, 2763
BfoI RGCGCY 1 cut(s) 2480
BfrI CTTAAG 2 cut(s) 757, 790
BfuI GTATCC 2 cut(s) 962, 2462
BglI GCCNNNNNGGC 1 cut(s) 2266
BglII AGATCT 2 cut(s) 922, 1060
BisI GCNGC 7 cut(s) 329, 862, 1048, 1867, 1953, 1974, 2766
BlpI GCTNAGC 2 cut(s) 132, 1456
BlsI GCNGC 7 cut(s) 330, 863, 1049, 1868, 1954, 1975, 2767
Bme1390I CCNGG 3 cut(s) 296, 1773, 2966
Bme18I GGWCC 4 cut(s) 292, 443, 1881, 2228
BmeRI GACNNNNNGTC 1 cut(s) 1516
BmeT110I CYCGRG 1 cut(s) 1267
BmiI GGNNCC 5 cut(s) 733, 2478, 2618, 2661, 2674
BmrFI CCNGG 3 cut(s) 296, 1773, 2966
BmrI ACTGGG 2 cut(s) 1023, 2849
BmsI GCATC 6 cut(s) 699, 1251, 1960, 2166, 2917, 2932
BmtI GCTAGC 1 cut(s) 2303
BmuI ACTGGG 2 cut(s) 1023, 2849
BpiI GAAGAC 1 cut(s) 1543
BpmI CTGGAG 1 cut(s) 1123
Bpu1102I GCTNAGC 2 cut(s) 132, 1456
BpuEI CTTGAG 2 cut(s) 323, 790
BpuMI CCSGG 1 cut(s) 2966
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 2477
BsaI GGTCTC 2 cut(s) 2370, 2743
BsaJI CCNNGG 2 cut(s) 492, 1266
BsaWI WCCGGW 2 cut(s) 526, 1021
Bsc4I CCNNNNNNNGG 8 cut(s) 392, 462, 487, 533, 1715, 2237, 2314, 2669
Bse21I CCTNAGG 1 cut(s) 2855
Bse3DI GCAATG 4 cut(s) 259, 1199, 2286, 2703
Bse8I GATNNNNATC 1 cut(s) 32
BseAI TCCGGA 1 cut(s) 1021
BseBI CCWGG 2 cut(s) 296, 1773
BseDI CCNNGG 2 cut(s) 492, 1266
BseGI GGATG 6 cut(s) 304, 1264, 2112, 2125, 2156, 2921
BseJI GATNNNNATC 1 cut(s) 32
BseLI CCNNNNNNNGG 8 cut(s) 392, 462, 487, 533, 1715, 2237, 2314, 2669
BseMI GCAATG 4 cut(s) 259, 1199, 2286, 2703
BseMII CTCAG 7 cut(s) 123, 436, 1519, 1761, 2738, 2810, 2918
BseRI GAGGAG 2 cut(s) 38, 2441
BseSI GKGCMC 2 cut(s) 735, 2620
BseXI GCAGC 6 cut(s) 315, 848, 1853, 1939, 1960, 2777
BseYI CCCAGC 1 cut(s) 1685
BshNI GGYRCC 1 cut(s) 2476
BsiHKAI GWGCWC 3 cut(s) 806, 2553, 2794
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 3 cut(s) 527, 1022, 2965
BslFI GGGAC 6 cut(s) 1079, 1100, 1307, 1708, 1732, 2873
BslI CCNNNNNNNGG 8 cut(s) 392, 462, 487, 533, 1715, 2237, 2314, 2669
BsmAI GTCTC 4 cut(s) 1503, 2370, 2743, 2894
BsmFI GGGAC 6 cut(s) 1079, 1100, 1307, 1708, 1732, 2873
BsmI GAATGC 1 cut(s) 1848
Bso31I GGTCTC 2 cut(s) 2370, 2743
BsoBI CYCGRG 1 cut(s) 1267
Bsp120I GGGCCC 2 cut(s) 731, 2616
Bsp1286I GDGCHC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
Bsp13I TCCGGA 1 cut(s) 1021
Bsp1407I TGTACA 1 cut(s) 1404
Bsp1720I GCTNAGC 2 cut(s) 132, 1456
BspACI CCGC 4 cut(s) 795, 1048, 1417, 1802
BspCNI CTCAG 7 cut(s) 124, 435, 1518, 1760, 2739, 2811, 2917
BspEI TCCGGA 1 cut(s) 1021
BspHI TCATGA 2 cut(s) 121, 2800
BspLI GGNNCC 5 cut(s) 733, 2478, 2618, 2661, 2674
BspMAI CTGCAG 1 cut(s) 2767
BspOI GCTAGC 1 cut(s) 2303
BspPI GGATC 9 cut(s) 216, 883, 1037, 1663, 1920, 2654, 2667, 2667, 2680
BspT107I GGYRCC 1 cut(s) 2476
BspTI CTTAAG 2 cut(s) 757, 790
BspTNI GGTCTC 2 cut(s) 2370, 2743
BsrDI GCAATG 4 cut(s) 259, 1199, 2286, 2703
BsrGI TGTACA 1 cut(s) 1404
BssECI CCNNGG 2 cut(s) 492, 1266
BssNAI GTATAC 1 cut(s) 2243
BssNI GRCGYC 1 cut(s) 2477
BssT1I CCWWGG 1 cut(s) 492
Bst1107I GTATAC 1 cut(s) 2243
Bst2UI CCWGG 2 cut(s) 296, 1773
Bst4CI ACNGT 8 cut(s) 239, 591, 1194, 1300, 1477, 2528, 2867, 2962
Bst6I CTCTTC 5 cut(s) 99, 233, 2418, 2685, 2953
BstACI GRCGYC 1 cut(s) 2477
BstAFI CTTAAG 2 cut(s) 757, 790
BstAPI GCANNNNNTGC 1 cut(s) 258
BstAUI TGTACA 1 cut(s) 1404
BstC8I GCNNGC 6 cut(s) 114, 714, 911, 1417, 2301, 2777
BstENI CCTNNNNNAGG 1 cut(s) 2312
BstF5I GGATG 6 cut(s) 304, 1264, 2112, 2125, 2156, 2921
BstH2I RGCGCY 1 cut(s) 2480
BstHHI GCGC 1 cut(s) 2479
BstMAI GTCTC 4 cut(s) 1503, 2370, 2743, 2894
BstMWI GCNNNNNNNGC 6 cut(s) 258, 801, 1015, 1361, 1875, 2266
BstNI CCWGG 2 cut(s) 296, 1773
BstNSI RCATGY 3 cut(s) 841, 1107, 2779
BstSCI CCNGG 3 cut(s) 294, 1771, 2964
BstSFI CTRYAG 2 cut(s) 2463, 2763
BstSLI GKGCMC 2 cut(s) 735, 2620
BstV1I GCAGC 6 cut(s) 315, 848, 1853, 1939, 1960, 2777
BstV2I GAAGAC 1 cut(s) 1543
BstX2I RGATCY 6 cut(s) 922, 1060, 1668, 1912, 2659, 2672
BstXI CCANNNNNNTGG 1 cut(s) 390
BstYI RGATCY 6 cut(s) 922, 1060, 1668, 1912, 2659, 2672
BstZ17I GTATAC 1 cut(s) 2243
Bsu36I CCTNAGG 1 cut(s) 2855
BsuI GTATCC 2 cut(s) 962, 2462
BtsCI GGATG 6 cut(s) 304, 1264, 2112, 2125, 2156, 2921
BtsIMutI CAGTG 9 cut(s) 317, 430, 582, 654, 790, 1320, 1473, 2324, 2744
Cac8I GCNNGC 6 cut(s) 114, 714, 911, 1417, 2301, 2777
CaiI CAGNNNCTG 1 cut(s) 295
CciI TCATGA 2 cut(s) 121, 2800
CfoI GCGC 1 cut(s) 2479
CsiI ACCWGGT 1 cut(s) 1771
Csp6I GTAC 4 cut(s) 214, 1249, 1405, 2034
CviQI GTAC 4 cut(s) 214, 1249, 1405, 2034
DinI GGCGCC 1 cut(s) 2478
DraI TTTAAA 1 cut(s) 1639
DraIII CACNNNGTG 1 cut(s) 1775
DriI GACNNNNNGTC 1 cut(s) 1516
EaeI YGGCCR 2 cut(s) 981, 2409
Eam1104I CTCTTC 5 cut(s) 99, 233, 2418, 2685, 2953
Eam1105I GACNNNNNGTC 1 cut(s) 1516
EarI CTCTTC 5 cut(s) 99, 233, 2418, 2685, 2953
Ecl136II GAGCTC 3 cut(s) 804, 2551, 2792
Eco130I CCWWGG 1 cut(s) 492
Eco24I GRGCYC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
Eco31I GGTCTC 2 cut(s) 2370, 2743
Eco32I GATATC 1 cut(s) 2347
Eco47I GGWCC 4 cut(s) 292, 443, 1881, 2228
Eco53kI GAGCTC 3 cut(s) 804, 2551, 2792
Eco57I CTGAAG 1 cut(s) 680
Eco81I CCTNAGG 1 cut(s) 2855
Eco88I CYCGRG 1 cut(s) 1267
EcoICRI GAGCTC 3 cut(s) 804, 2551, 2792
EcoNI CCTNNNNNAGG 1 cut(s) 2312
EcoO109I RGGNCCY 6 cut(s) 292, 443, 731, 1881, 2617, 2851
EcoRII CCWGG 2 cut(s) 294, 1771
EcoRV GATATC 1 cut(s) 2347
EcoT14I CCWWGG 1 cut(s) 492
EcoT38I GRGCYC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
EgeI GGCGCC 1 cut(s) 2478
EheI GGCGCC 1 cut(s) 2478
ErhI CCWWGG 1 cut(s) 492
FaqI GGGAC 6 cut(s) 1079, 1100, 1307, 1708, 1732, 2873
FauI CCCGC 1 cut(s) 1424
FauNDI CATATG 1 cut(s) 1723
FblI GTMKAC 1 cut(s) 2242
Fnu4HI GCNGC 7 cut(s) 329, 862, 1048, 1867, 1953, 1974, 2766
FokI GGATG 6 cut(s) 311, 1271, 2112, 2119, 2163, 2908
FriOI GRGCYC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
Fsp4HI GCNGC 7 cut(s) 329, 862, 1048, 1867, 1953, 1974, 2766
FspBI CTAG 6 cut(s) 1887, 2300, 2369, 2417, 2609, 2654
GlaI GCGC 1 cut(s) 2478
GluI GCNGC 7 cut(s) 329, 862, 1048, 1867, 1953, 1974, 2766
GsaI CCCAGC 1 cut(s) 1689
GsuI CTGGAG 1 cut(s) 1123
HaeII RGCGCY 1 cut(s) 2480
HapII CCGG 3 cut(s) 527, 1022, 2965
HhaI GCGC 1 cut(s) 2479
Hin1I GRCGYC 1 cut(s) 2477
Hin6I GCGC 1 cut(s) 2477
HinP1I GCGC 1 cut(s) 2477
HindIII AAGCTT 2 cut(s) 907, 1982
HpaII CCGG 3 cut(s) 527, 1022, 2965
HphI GGTGA 5 cut(s) 334, 1337, 1787, 2730, 2843
Hpy166II GTNNAC 6 cut(s) 430, 1730, 2011, 2231, 2243, 2524
Hpy8I GTNNAC 6 cut(s) 430, 1730, 2011, 2231, 2243, 2524
HpyCH4III ACNGT 8 cut(s) 239, 591, 1194, 1300, 1477, 2528, 2867, 2962
HpyF10VI GCNNNNNNNGC 6 cut(s) 258, 801, 1015, 1361, 1875, 2266
Hsp92I GRCGYC 1 cut(s) 2477
HspAI GCGC 1 cut(s) 2477
KasI GGCGCC 1 cut(s) 2476
Kpn2I TCCGGA 1 cut(s) 1021
LmnI GCTCC 3 cut(s) 858, 1277, 2650
Lsp1109I GCAGC 6 cut(s) 315, 848, 1853, 1939, 1960, 2777
LweI GCATC 6 cut(s) 699, 1251, 1960, 2166, 2917, 2932
MabI ACCWGGT 1 cut(s) 1771
MaeI CTAG 6 cut(s) 1887, 2300, 2369, 2417, 2609, 2654
MaeIII GTNAC 3 cut(s) 644, 785, 1001
MfeI CAATTG 1 cut(s) 1165
MflI RGATCY 6 cut(s) 922, 1060, 1668, 1912, 2659, 2672
MhlI GDGCHC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
MlsI TGGCCA 2 cut(s) 983, 2411
MluNI TGGCCA 2 cut(s) 983, 2411
Mly113I GGCGCC 1 cut(s) 2477
MlyI GAGTC 6 cut(s) 85, 1082, 1763, 1920, 2896, 2899
MmeI TCCRAC 5 cut(s) 209, 387, 1513, 1737, 1786
Mox20I TGGCCA 2 cut(s) 983, 2411
MroI TCCGGA 1 cut(s) 1021
MroXI GAANNNNTTC 2 cut(s) 1500, 1793
MscI TGGCCA 2 cut(s) 983, 2411
MslI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1835
Msp20I TGGCCA 2 cut(s) 983, 2411
MspA1I CMGCKG 1 cut(s) 101
MspCI CTTAAG 2 cut(s) 757, 790
MspI CCGG 3 cut(s) 527, 1022, 2965
MspR9I CCNGG 3 cut(s) 296, 1773, 2966
MunI CAATTG 1 cut(s) 1165
Mva1269I GAATGC 1 cut(s) 1848
MvaI CCWGG 2 cut(s) 296, 1773
MwoI GCNNNNNNNGC 6 cut(s) 258, 801, 1015, 1361, 1875, 2266
NarI GGCGCC 1 cut(s) 2477
NciI CCSGG 1 cut(s) 2966
NdeI CATATG 1 cut(s) 1723
NheI GCTAGC 1 cut(s) 2299
NlaIV GGNNCC 5 cut(s) 733, 2478, 2618, 2661, 2674
NmeAIII GCCGAG 1 cut(s) 2813
NmuCI GTSAC 1 cut(s) 785
NspI RCATGY 3 cut(s) 841, 1107, 2779
PaeI GCATGC 1 cut(s) 2779
PagI TCATGA 2 cut(s) 121, 2800
PciI ACATGT 1 cut(s) 1103
PctI GAATGC 1 cut(s) 1848
PdmI GAANNNNTTC 2 cut(s) 1500, 1793
PfeI GAWTC 4 cut(s) 1935, 2318, 2804, 2990
PflFI GACNNNGTC 1 cut(s) 1091
PfoI TCCNGGA 1 cut(s) 2964
PkrI GCNGC 7 cut(s) 330, 863, 1049, 1868, 1954, 1975, 2767
PleI GAGTC 6 cut(s) 85, 1082, 1762, 1920, 2896, 2898
PluTI GGCGCC 1 cut(s) 2480
PpsI GAGTC 6 cut(s) 85, 1082, 1762, 1920, 2896, 2898
PpuMI RGGWCCY 3 cut(s) 292, 443, 1881
PscI ACATGT 1 cut(s) 1103
PshBI ATTAAT 1 cut(s) 1209
Psp124BI GAGCTC 3 cut(s) 806, 2553, 2794
Psp5II RGGWCCY 3 cut(s) 292, 443, 1881
Psp6I CCWGG 2 cut(s) 294, 1771
PspFI CCCAGC 1 cut(s) 1685
PspGI CCWGG 2 cut(s) 294, 1771
PspN4I GGNNCC 5 cut(s) 733, 2478, 2618, 2661, 2674
PspOMI GGGCCC 2 cut(s) 731, 2616
PspPPI RGGWCCY 3 cut(s) 292, 443, 1881
PstI CTGCAG 1 cut(s) 2767
PstNI CAGNNNCTG 1 cut(s) 295
PsuI RGATCY 6 cut(s) 922, 1060, 1668, 1912, 2659, 2672
PsyI GACNNNGTC 1 cut(s) 1091
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 4 cut(s) 215, 1250, 1406, 2035
RsaNI GTAC 4 cut(s) 214, 1249, 1405, 2034
RseI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1835
SacI GAGCTC 3 cut(s) 806, 2553, 2794
SatI GCNGC 7 cut(s) 329, 862, 1048, 1867, 1953, 1974, 2766
SchI GAGTC 6 cut(s) 85, 1082, 1763, 1920, 2896, 2899
ScrFI CCNGG 3 cut(s) 296, 1773, 2966
SduI GDGCHC 6 cut(s) 398, 735, 806, 2553, 2620, 2794
SexAI ACCWGGT 1 cut(s) 1771
SfaNI GCATC 6 cut(s) 699, 1251, 1960, 2166, 2917, 2932
SfcI CTRYAG 2 cut(s) 2463, 2763
SfoI GGCGCC 1 cut(s) 2478
SinI GGWCC 4 cut(s) 292, 443, 1881, 2228
SmiMI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1835
SmlI CTYRAG 4 cut(s) 338, 757, 790, 805
SmoI CTYRAG 4 cut(s) 338, 757, 790, 805
SphI GCATGC 1 cut(s) 2779
SsiI CCGC 4 cut(s) 795, 1048, 1417, 1802
SspDI GGCGCC 1 cut(s) 2476
SspI AATATT 4 cut(s) 181, 1591, 1794, 2881
SspMI CTAG 6 cut(s) 1887, 2300, 2369, 2417, 2609, 2654
SstI GAGCTC 3 cut(s) 806, 2553, 2794
StyD4I CCNGG 3 cut(s) 294, 1771, 2964
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 8 cut(s) 239, 591, 1194, 1300, 1477, 2528, 2867, 2962
TaqI TCGA 6 cut(s) 568, 824, 1108, 2160, 2321, 2581
TatI WGTACW 2 cut(s) 213, 1404
TauI GCSGC 1 cut(s) 1050
TfiI GAWTC 4 cut(s) 1935, 2318, 2804, 2990
TscAI CASTG 9 cut(s) 324, 430, 589, 661, 790, 1327, 1480, 2331, 2751
TseFI GTSAC 1 cut(s) 785
TseI GCWGC 6 cut(s) 328, 861, 1866, 1952, 1973, 2765
Tsp45I GTSAC 1 cut(s) 785
TspGWI ACGGA 2 cut(s) 221, 1661
TspRI CASTG 9 cut(s) 324, 430, 589, 661, 790, 1327, 1480, 2331, 2751
Tth111I GACNNNGTC 1 cut(s) 1091
Vha464I CTTAAG 2 cut(s) 757, 790
VpaK11BI GGWCC 4 cut(s) 292, 443, 1881, 2228
VspI ATTAAT 1 cut(s) 1209
XagI CCTNNNNNAGG 1 cut(s) 2312
XapI RAATTY 4 cut(s) 157, 410, 663, 1342
XbaI TCTAGA 1 cut(s) 2608
XceI RCATGY 3 cut(s) 841, 1107, 2779
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XmiI GTMKAC 1 cut(s) 2242
XmnI GAANNNNTTC 2 cut(s) 1500, 1793
XspI CTAG 6 cut(s) 1887, 2300, 2369, 2417, 2609, 2654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.