Rw5G007880

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
8394352 .. 8409881
15530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G007880.1

Sequence Viewer

Length: 3048 bp
ATGAAGATGGCAATTAGAGTTGGAGTTAGAGTTTGGAAAACCATCATGAACCTCAACTTGGTGGTGATACTAGTTCACTGCAGCTTTGGATCAGTCGAAATTGAAGCTCTTTCGACTCGTCTCCCTGATACTGAAGTGCAAGCCCTACGAGAAATTGCTGCACAAATAGGTAAAAAAGACTGGAACTTCAAGGTAGACCCGTGCACAGGTTGGAACTCCTCAAAATCTGCTGACACTCGATATAACAGCACTCTCATTTGCAACTGCGCCTTCCCTCATGGCTCATGCCACGTCACCCATATTATTCTTAAAGGGCAAGATCTTGCTGGTGTACCTCCACCATCTATTGCAAATTTACCATACCTTACACAAATCAATCTCCCAAGGAACTTCCTCAGTGGTAATATACCGAGTGAATGGGCTTCTACAAAGTTGACATATATGTCCCTCAGTGTGAACAACTTATCCGGACCAATCCCTGCCTTCCTAGGAAACATTACCACTCTAACATACTTGAGTCTAGAGTCAAACATGTTTTCCGAAACTGTTCCTCCTGAGCTTGGCAATTTGGTTAACTTGCAGTCTCTCATTCTTAATGCAAACAATCTCACAGGAGTGTTGCCACTGCATCTCACTAATCTGACCAAATTAACAGAATTGAGGATTAGCAGTAACAACTTCACTGGAATTATTCCAGACTTTTTCCGAAGTTGGAGTCAACTTACGAAATTAGAGATCCAAGCAAGTGGTTTACAAGGCCCCATTCCATCTAGCATTTCTGTCTTGAGTAACTTAACAGACCTAAGGATCAGCGACTTAAATGGACGGGGTTCAGTATTTCCAAACTTGACTAATATGAAAAGCATGAAAAGATTAATGCTGAGGAGCTGTAAATTATATGGACCTATTCCTGATTTAAGAGCGATGAAAGTAGTAAATATGTTAGATCTCAGCTTCAACCAATTGGAAGGAAGGTTTCCTGATCTTGAAGCTATGGCTCTAGATCCGGACAATTTGCAGTACTTGTATCTGACAAGCAACTTGCTCAATGGCTCTATTCCAAAATGGATTAAGAACAAAGATAACCGCTACCAGATAGATGTTTCTTACAATAATTTTTCCAAGGACTCTGAGCCACCTACATGTAACGACTACCTGAACTTTTTCAAAAGCTCCTCTGCACCAAACAACTCATTTTCTGGAGCGTGCCTGGAGAAATATACTTGTACAAAAGTTCAGTACTCATTGCATGTAAACTGTGGTGGAGGAGCAACCACAATTGAAGGAGTCAAATTTGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTCTTCCAAGACCTAACTGGGGAACCAGTAGCACTGGATTTTTCTGGGATACTAACATCACCGGTGATGACTATATAGCAAATAATGTATCGGTACTGGGAATGAAAAACTCTGAGTTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACATATTATGCAAACTGCTTAGGAGATGGAAATTATACTGTGAAACTTCATTTTGCGGAGATAATAATCCGAGGCAATAGATCTTATTACAGTCTTGGAAGACGGATATTTGATGTGTATATTCAGGAGAAACGCGTATTGAAGGATTTTGACATTGTAAAGGAAGCAAAAGGTGTTGATAAGGAAGTCATTAAGGAGACGAAGGCAGTTCAGGTTAAGAATAAAACTCTAGAGATTCGGTTTCATTGGTCTGGGAAAGGCACAACAGATTCCCCAAGGAGAGGAGTCTATGGTCCCCTTATATCAGCCATTTCTATAAAAGCTGAGTTCAAGCATTCCAAAACAAAGATGCATATTGTGGTTGGAGTTTCAGTTGGAGTTACGGTTTTGTGCCTTTTCTTCTTAATTTTTGGCATTATTTGGTGGAAAGGCTGTCGGGTGGATAAACAAACATCAAGGGAAGAAGTTCTGAGAGGACTGGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTTTAAACAAAATTGGAGAAGGTGGTTTTGGTCCCGTCTACAAGGGTATACTATTGGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCGAAGCAGGGAAATCGTGAATTTGTGAACGAAATAGGCATGATCTCTTGTTTGCAGCATCCAAATCTGGTTAGAATGTATGGATGTTGTATTGAAGCAAACCAGTTATTGTTGGTATATGAGTACATGGAGAACAATAGCCTTGCTCGGGCTTTGTACGGTCCAGAGGATGATGCCTTAAATTTGGACTGGCCTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCATGAGGAATCGGCGGTGAAGGTTGTACATAGAGACATAAAAACTACGAATGTTTTACTGGACCGAGACCTCAATGCTAAGATCTCAGACTTTGGTTTGGCTAAGCTTGACGAAGAGGAGAACAGTCACATTAGCACCAGGATTGCTGGAACTATAGGATACATGGCACCGGAATATGCTCTATGGGGTTGTTTGACCTTTAAAGCAGATGTTTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTACAGGAAAGAACAACATGAAATATCGACCCAATGAGAACATTCAATGTCTTATGGATTGGGCTCTTGTTTTGCAACAAAGAGGGAACTTACTGGAGCTGGTGGATCCGAGGTTGGGGTCCGATTTCAATAAGAAAGAGGCGATTAGAACGATCAAAGTAGCTCTACTGTGCGCCAATCCAACAGCTGCACTTAGGCCTATCATGTCTGAAGTAGTGAGTATGCTTGAAGGGCGGACCCCCGTGGATGAAGTGGCTCTGGATCCAAGAATCCATGGTGATGAAATGACGAGGTTAAGAGCCTTCGAAGAGCAGTTTGATCACAGTACTGCAGAAGGGAGCTCCCCAAGTGGAAGTCACAGCCTCATTCGTTCATCAGATGCACCATGGACCGGTTCTTCTGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAA

Protein Analysis

1015

Amino Acids

112.79

Weight (kDa)

8.18

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 162 - 359 7.8e-12 Leucine-rich repeat region
LRR_8 PF13855 192 - 247 5.8e-07 Leucine rich repeat
Malectin PF11721 415 - 598 9e-37 Malectin domain
Pkinase PF00069 676 - 882 2.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 677 - 883 4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 442
AccB1I GGYRCC 1 cut(s) 2527
AccI GTMKAC 3 cut(s) 195, 2061, 2071
AccII CGCG 1 cut(s) 1617
AccIII TCCGGA 2 cut(s) 467, 1006
AciI CCGC 4 cut(s) 1087, 1538, 2375, 2839
AcsI RAATTY 5 cut(s) 352, 1292, 1328, 2138, 2299
AcuI CTGAAG 3 cut(s) 153, 2835, 3006
AfiI CCNNNNNNNGG 8 cut(s) 58, 206, 560, 1349, 1763, 2266, 2720, 2996
AflIII ACRYGT 3 cut(s) 531, 1142, 1615
AgeI ACCGGT 2 cut(s) 1391, 2996
AhlI ACTAGT 1 cut(s) 70
AjiI CACGTC 1 cut(s) 292
AjnI CCWGG 2 cut(s) 1209, 2498
AjuI GAANNNNNNNTTGG 4 cut(s) 41, 73, 2034, 2066
AleI CACNNNNGTG 1 cut(s) 614
AloI GAACNNNNNNTCC 2 cut(s) 449, 481
Alw21I GWGCWC 2 cut(s) 206, 2948
Alw26I GTCTC 5 cut(s) 125, 588, 1673, 2388, 2421
Alw44I GTGCAC 1 cut(s) 202
Ama87I CYCGRG 1 cut(s) 2265
Aor13HI TCCGGA 2 cut(s) 467, 1006
AoxI GGCC 3 cut(s) 757, 2309, 2801
ApaLI GTGCAC 1 cut(s) 202
ApeKI GCWGC 5 cut(s) 81, 158, 2003, 2173, 2792
ApoI RAATTY 5 cut(s) 352, 1292, 1328, 2138, 2299
ArsI GACNNNNNNTTYG 2 cut(s) 700, 732
AseI ATTAAT 1 cut(s) 875
AsiGI ACCGGT 2 cut(s) 1391, 2996
Asp700I GAANNNNTTC 3 cut(s) 546, 1163, 1947
AspA2I CCTAGG 2 cut(s) 487, 2332
AspLEI GCGC 2 cut(s) 269, 2780
AsuHPI GGTGA 7 cut(s) 76, 286, 1381, 1406, 1975, 2389, 2894
AsuII TTCGAA 1 cut(s) 2910
AvaI CYCGRG 1 cut(s) 2265
AvaII GGWCC 9 cut(s) 470, 902, 1775, 2054, 2279, 2422, 2724, 2841, 2994
AvrII CCTAGG 2 cut(s) 487, 2332
AxyI CCTNAGG 1 cut(s) 803
BaeGI GKGCMC 1 cut(s) 206
BaeI ACNNNNGTAYC 2 cut(s) 120, 153
BamHI GGATCC 2 cut(s) 2710, 2866
BanI GGYRCC 1 cut(s) 2527
BanII GRGCYC 2 cut(s) 2671, 2948
BbsI GAAGAC 2 cut(s) 1588, 3012
Bbv12I GWGCWC 2 cut(s) 206, 2948
BbvCI CCTCAGC 1 cut(s) 881
BbvI GCAGC 5 cut(s) 93, 145, 1990, 2185, 2779
BccI CCATC 5 cut(s) 50, 349, 775, 1502, 2075
BcgI CGANNNNNNTGC 2 cut(s) 2114, 2148
BciT130I CCWGG 2 cut(s) 1211, 2500
BciVI GTATCC 2 cut(s) 1372, 2513
BclI TGATCA 1 cut(s) 2923
BcoDI GTCTC 5 cut(s) 125, 588, 1673, 2388, 2421
BcuI ACTAGT 1 cut(s) 70
BfaI CTAG 7 cut(s) 71, 488, 521, 771, 1001, 1712, 2333
BfmI CTRYAG 4 cut(s) 79, 1967, 2514, 2934
BfuI GTATCC 2 cut(s) 1372, 2513
BglI GCCNNNNNGGC 1 cut(s) 2317
BglII AGATCT 6 cut(s) 319, 946, 1309, 1562, 2442, 3025
BisI GCNGC 5 cut(s) 82, 159, 2004, 2174, 2793
BlnI CCTAGG 2 cut(s) 487, 2332
BlpI GCTNAGC 1 cut(s) 2463
BlsI GCNGC 5 cut(s) 83, 160, 2005, 2175, 2794
BmcAI AGTACT 3 cut(s) 1022, 1241, 2932
Bme1390I CCNGG 2 cut(s) 1211, 2500
Bme18I GGWCC 9 cut(s) 470, 902, 1775, 2054, 2279, 2422, 2724, 2841, 2994
BmeT110I CYCGRG 1 cut(s) 2265
BmgBI CACGTC 1 cut(s) 292
BmiI GGNNCC 9 cut(s) 760, 1354, 1777, 2056, 2529, 2712, 2725, 2843, 2868
BmrFI CCNGG 2 cut(s) 1211, 2500
BmrI ACTGGG 2 cut(s) 1357, 1436
BmsI GCATC 5 cut(s) 637, 1821, 2185, 2281, 2974
BmuI ACTGGG 2 cut(s) 1357, 1436
BpiI GAAGAC 2 cut(s) 1588, 3012
BpmI CTGGAG 3 cut(s) 1221, 1232, 2720
Bpu10I CCTNAGC 3 cut(s) 555, 881, 1501
Bpu1102I GCTNAGC 1 cut(s) 2463
Bpu14I TTCGAA 1 cut(s) 2910
BpuEI CTTGAG 3 cut(s) 535, 805, 2008
BsaBI GATNNNNATC 2 cut(s) 1308, 1547
BsaI GGTCTC 1 cut(s) 2421
BsaWI WCCGGW 5 cut(s) 467, 1006, 1391, 2530, 2996
BsaXI ACNNNNNCTCC 8 cut(s) 15, 45, 535, 565, 1839, 1851, 1869, 1881
Bsc4I CCNNNNNNNGG 8 cut(s) 58, 206, 560, 1349, 1763, 2266, 2720, 2996
Bse118I RCCGGY 2 cut(s) 1391, 2996
Bse21I CCTNAGG 1 cut(s) 803
Bse3DI GCAATG 1 cut(s) 1244
Bse8I GATNNNNATC 2 cut(s) 1308, 1547
BseAI TCCGGA 2 cut(s) 467, 1006
BseBI CCWGG 2 cut(s) 1211, 2500
BseGI GGATG 5 cut(s) 2086, 2176, 2207, 2293, 2857
BseJI GATNNNNATC 2 cut(s) 1308, 1547
BseLI CCNNNNNNNGG 8 cut(s) 58, 206, 560, 1349, 1763, 2266, 2720, 2996
BseMI GCAATG 1 cut(s) 1244
BseRI GAGGAG 7 cut(s) 208, 898, 1165, 1281, 1461, 1779, 2492
BseSI GKGCMC 1 cut(s) 206
BseXI GCAGC 5 cut(s) 93, 145, 1990, 2185, 2779
BsgI GTGCAG 3 cut(s) 144, 1164, 2778
Bsh1236I CGCG 1 cut(s) 1617
BshFI GGCC 3 cut(s) 759, 2311, 2803
BshNI GGYRCC 1 cut(s) 2527
BshTI ACCGGT 2 cut(s) 1391, 2996
BsiHKAI GWGCWC 2 cut(s) 206, 2948
BsiHKCI CYCGRG 1 cut(s) 2265
BsiSI CCGG 5 cut(s) 468, 1007, 1392, 2531, 2997
BslFI GGGAC 3 cut(s) 430, 1761, 2040
BslI CCNNNNNNNGG 8 cut(s) 58, 206, 560, 1349, 1763, 2266, 2720, 2996
BsmAI GTCTC 5 cut(s) 125, 588, 1673, 2388, 2421
BsmBI CGTCTC 2 cut(s) 125, 1673
BsmFI GGGAC 3 cut(s) 430, 1761, 2040
BsmI GAATGC 2 cut(s) 1462, 1816
BsnI GGCC 3 cut(s) 759, 2311, 2803
Bso31I GGTCTC 1 cut(s) 2421
BsoBI CYCGRG 1 cut(s) 2265
Bsp119I TTCGAA 1 cut(s) 2910
Bsp1286I GDGCHC 3 cut(s) 206, 2671, 2948
Bsp13I TCCGGA 2 cut(s) 467, 1006
Bsp1407I TGTACA 3 cut(s) 1226, 1449, 2386
Bsp1720I GCTNAGC 1 cut(s) 2463
Bsp19I CCATGG 2 cut(s) 2878, 2990
BspACI CCGC 4 cut(s) 1087, 1538, 2375, 2839
BspANI GGCC 3 cut(s) 759, 2311, 2803
BspEI TCCGGA 2 cut(s) 467, 1006
BspFNI CGCG 1 cut(s) 1617
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 9 cut(s) 760, 1354, 1777, 2056, 2529, 2712, 2725, 2843, 2868
BspMAI CTGCAG 3 cut(s) 83, 1971, 2938
BspQI GCTCTTC 1 cut(s) 2907
BspT104I TTCGAA 1 cut(s) 2910
BspT107I GGYRCC 1 cut(s) 2527
BspTNI GGTCTC 1 cut(s) 2421
BsrDI GCAATG 1 cut(s) 1244
BsrFI RCCGGY 2 cut(s) 1391, 2996
BsrGI TGTACA 3 cut(s) 1226, 1449, 2386
BssAI RCCGGY 2 cut(s) 1391, 2996
BssNAI GTATAC 1 cut(s) 2072
BssT1I CCWWGG 7 cut(s) 383, 487, 1122, 1757, 2332, 2878, 2990
Bst1107I GTATAC 1 cut(s) 2072
Bst2UI CCWGG 2 cut(s) 1211, 2500
Bst6I CTCTTC 2 cut(s) 2469, 2907
BstAUI TGTACA 3 cut(s) 1226, 1449, 2386
BstBI TTCGAA 1 cut(s) 2910
BstC8I GCNNGC 3 cut(s) 141, 1207, 1462
BstDSI CCRYGG 3 cut(s) 2847, 2878, 2990
BstF5I GGATG 5 cut(s) 2086, 2176, 2207, 2293, 2857
BstFNI CGCG 1 cut(s) 1617
BstHHI GCGC 2 cut(s) 269, 2780
BstMAI GTCTC 5 cut(s) 125, 588, 1673, 2388, 2421
BstMWI GCNNNNNNNGC 2 cut(s) 2317, 2836
BstNI CCWGG 2 cut(s) 1211, 2500
BstNSI RCATGY 3 cut(s) 535, 1146, 1253
BstSCI CCNGG 2 cut(s) 1209, 2498
BstSFI CTRYAG 4 cut(s) 79, 1967, 2514, 2934
BstSLI GKGCMC 1 cut(s) 206
BstUI CGCG 1 cut(s) 1617
BstV1I GCAGC 5 cut(s) 93, 145, 1990, 2185, 2779
BstV2I GAAGAC 2 cut(s) 1588, 3012
BstXI CCANNNNNNTGG 1 cut(s) 746
BstZ17I GTATAC 1 cut(s) 2072
Bsu36I CCTNAGG 1 cut(s) 803
BsuI GTATCC 2 cut(s) 1372, 2513
BsuRI GGCC 3 cut(s) 759, 2311, 2803
BtgI CCRYGG 3 cut(s) 2847, 2878, 2990
BtgZI GCGATG 1 cut(s) 938
BtrI CACGTC 1 cut(s) 292
BtsCI GGATG 5 cut(s) 2086, 2176, 2207, 2293, 2857
BtsI GCAGTG 2 cut(s) 76, 623
BtsIMutI CAGTG 6 cut(s) 76, 403, 457, 623, 681, 1362
Cac8I GCNNGC 3 cut(s) 141, 1207, 1462
CciI TCATGA 1 cut(s) 45
CfoI GCGC 2 cut(s) 269, 2780
Cfr10I RCCGGY 2 cut(s) 1391, 2996
CspAI ACCGGT 2 cut(s) 1391, 2996
DraI TTTAAA 2 cut(s) 2028, 2563
DrdI GACNNNNNNGTC 1 cut(s) 442
DseDI GACNNNNNNGTC 1 cut(s) 442
Eam1104I CTCTTC 2 cut(s) 2469, 2907
EarI CTCTTC 2 cut(s) 2469, 2907
EciI GGCGGA 1 cut(s) 2854
Ecl136II GAGCTC 1 cut(s) 2946
Eco130I CCWWGG 7 cut(s) 383, 487, 1122, 1757, 2332, 2878, 2990
Eco147I AGGCCT 1 cut(s) 2803
Eco24I GRGCYC 2 cut(s) 2671, 2948
Eco31I GGTCTC 1 cut(s) 2421
Eco47I GGWCC 9 cut(s) 470, 902, 1775, 2054, 2279, 2422, 2724, 2841, 2994
Eco53kI GAGCTC 1 cut(s) 2946
Eco57I CTGAAG 3 cut(s) 153, 2835, 3006
Eco81I CCTNAGG 1 cut(s) 803
Eco88I CYCGRG 1 cut(s) 2265
EcoICRI GAGCTC 1 cut(s) 2946
EcoO109I RGGNCCY 1 cut(s) 758
EcoRII CCWGG 2 cut(s) 1209, 2498
EcoT14I CCWWGG 7 cut(s) 383, 487, 1122, 1757, 2332, 2878, 2990
EcoT22I ATGCAT 1 cut(s) 1836
EcoT38I GRGCYC 2 cut(s) 2671, 2948
ErhI CCWWGG 7 cut(s) 383, 487, 1122, 1757, 2332, 2878, 2990
Esp3I CGTCTC 2 cut(s) 125, 1673
FaqI GGGAC 3 cut(s) 430, 1761, 2040
FbaI TGATCA 1 cut(s) 2923
FblI GTMKAC 3 cut(s) 195, 2061, 2071
Fnu4HI GCNGC 5 cut(s) 82, 159, 2004, 2174, 2793
FokI GGATG 5 cut(s) 2093, 2163, 2214, 2300, 2864
FriOI GRGCYC 2 cut(s) 2671, 2948
Fsp4HI GCNGC 5 cut(s) 82, 159, 2004, 2174, 2793
FspBI CTAG 7 cut(s) 71, 488, 521, 771, 1001, 1712, 2333
GlaI GCGC 2 cut(s) 268, 2779
GluI GCNGC 5 cut(s) 82, 159, 2004, 2174, 2793
GsuI CTGGAG 3 cut(s) 1221, 1232, 2720
HaeIII GGCC 3 cut(s) 759, 2311, 2803
HapII CCGG 5 cut(s) 468, 1007, 1392, 2531, 2997
HhaI GCGC 2 cut(s) 269, 2780
Hin6I GCGC 2 cut(s) 267, 2778
HinP1I GCGC 2 cut(s) 267, 2778
HincII GTYRAC 3 cut(s) 435, 574, 719
HindII GTYRAC 3 cut(s) 435, 574, 719
HindIII AAGCTT 1 cut(s) 2465
HpaI GTTAAC 1 cut(s) 574
HpaII CCGG 5 cut(s) 468, 1007, 1392, 2531, 2997
HphI GGTGA 7 cut(s) 76, 286, 1381, 1406, 1975, 2389, 2894
HpyCH4IV ACGT 2 cut(s) 291, 3017
HpyF10VI GCNNNNNNNGC 2 cut(s) 2317, 2836
HpySE526I ACGT 2 cut(s) 291, 3017
HspAI GCGC 2 cut(s) 267, 2778
Kpn2I TCCGGA 2 cut(s) 467, 1006
Ksp22I TGATCA 1 cut(s) 2923
KspAI GTTAAC 1 cut(s) 574
LguI GCTCTTC 1 cut(s) 2907
LmnI GCTCC 8 cut(s) 885, 1178, 1202, 1268, 1322, 2701, 2943, 2951
Lsp1109I GCAGC 5 cut(s) 93, 145, 1990, 2185, 2779
LweI GCATC 5 cut(s) 637, 1821, 2185, 2281, 2974
MaeI CTAG 7 cut(s) 71, 488, 521, 771, 1001, 1712, 2333
MaeII ACGT 2 cut(s) 291, 3017
MaeIII GTNAC 9 cut(s) 292, 671, 788, 1145, 1861, 2486, 2605, 2960, 3007
MfeI CAATTG 2 cut(s) 962, 1278
MhlI GDGCHC 3 cut(s) 206, 2671, 2948
MluI ACGCGT 1 cut(s) 1615
MlyI GAGTC 7 cut(s) 109, 526, 533, 724, 1121, 1296, 1776
MmeI TCCRAC 5 cut(s) 191, 692, 1825, 1837, 2810
Mph1103I ATGCAT 1 cut(s) 1836
MroI TCCGGA 2 cut(s) 467, 1006
MroXI GAANNNNTTC 3 cut(s) 546, 1163, 1947
MslI CAYNNNNRTG 3 cut(s) 614, 1141, 2883
MspA1I CMGCKG 1 cut(s) 2792
MspI CCGG 5 cut(s) 468, 1007, 1392, 2531, 2997
MspR9I CCNGG 2 cut(s) 1211, 2500
MunI CAATTG 2 cut(s) 962, 1278
Mva1269I GAATGC 2 cut(s) 1462, 1816
MvaI CCWGG 2 cut(s) 1211, 2500
MvnI CGCG 1 cut(s) 1617
MwoI GCNNNNNNNGC 2 cut(s) 2317, 2836
NcoI CCATGG 2 cut(s) 2878, 2990
NlaIV GGNNCC 9 cut(s) 760, 1354, 1777, 2056, 2529, 2712, 2725, 2843, 2868
NmuCI GTSAC 3 cut(s) 292, 2486, 2960
NsiI ATGCAT 1 cut(s) 1836
NspI RCATGY 3 cut(s) 535, 1146, 1253
NspV TTCGAA 1 cut(s) 2910
OliI CACNNNNGTG 1 cut(s) 614
PagI TCATGA 1 cut(s) 45
PceI AGGCCT 1 cut(s) 2803
PciI ACATGT 2 cut(s) 531, 1142
PciSI GCTCTTC 1 cut(s) 2907
PctI GAATGC 2 cut(s) 1462, 1816
PdmI GAANNNNTTC 3 cut(s) 546, 1163, 1947
PfeI GAWTC 4 cut(s) 1717, 1751, 2369, 2874
PinAI ACCGGT 2 cut(s) 1391, 2996
PkrI GCNGC 5 cut(s) 83, 160, 2005, 2175, 2794
PleI GAGTC 7 cut(s) 109, 525, 532, 723, 1121, 1295, 1775
PpsI GAGTC 7 cut(s) 109, 525, 532, 723, 1121, 1295, 1775
PscI ACATGT 2 cut(s) 531, 1142
PshBI ATTAAT 1 cut(s) 875
Psp124BI GAGCTC 1 cut(s) 2948
Psp6I CCWGG 2 cut(s) 1209, 2498
PspGI CCWGG 2 cut(s) 1209, 2498
PspN4I GGNNCC 9 cut(s) 760, 1354, 1777, 2056, 2529, 2712, 2725, 2843, 2868
PstI CTGCAG 3 cut(s) 83, 1971, 2938
PvuII CAGCTG 1 cut(s) 2792
RseI CAYNNNNRTG 3 cut(s) 614, 1141, 2883
SacI GAGCTC 1 cut(s) 2948
SapI GCTCTTC 1 cut(s) 2907
SatI GCNGC 5 cut(s) 82, 159, 2004, 2174, 2793
ScaI AGTACT 3 cut(s) 1022, 1241, 2932
SchI GAGTC 7 cut(s) 109, 526, 533, 724, 1121, 1296, 1776
ScrFI CCNGG 2 cut(s) 1211, 2500
SduI GDGCHC 3 cut(s) 206, 2671, 2948
SfaNI GCATC 5 cut(s) 637, 1821, 2185, 2281, 2974
SfcI CTRYAG 4 cut(s) 79, 1967, 2514, 2934
SfuI TTCGAA 1 cut(s) 2910
SgrAI CRCCGGYG 1 cut(s) 1391
SinI GGWCC 9 cut(s) 470, 902, 1775, 2054, 2279, 2422, 2724, 2841, 2994
SmiMI CAYNNNNRTG 3 cut(s) 614, 1141, 2883
SmlI CTYRAG 3 cut(s) 514, 784, 1987
SmoI CTYRAG 3 cut(s) 514, 784, 1987
SpeI ACTAGT 1 cut(s) 70
SseBI AGGCCT 1 cut(s) 2803
SsiI CCGC 4 cut(s) 1087, 1538, 2375, 2839
SspMI CTAG 7 cut(s) 71, 488, 521, 771, 1001, 1712, 2333
SstI GAGCTC 1 cut(s) 2948
StuI AGGCCT 1 cut(s) 2803
StyD4I CCNGG 2 cut(s) 1209, 2498
StyI CCWWGG 7 cut(s) 383, 487, 1122, 1757, 2332, 2878, 2990
TaiI ACGT 2 cut(s) 294, 3020
TaqI TCGA 6 cut(s) 96, 113, 238, 2120, 2632, 2910
TaqII GACCGA 1 cut(s) 2439
TatI WGTACW 7 cut(s) 1020, 1226, 1239, 1449, 2241, 2386, 2930
TfiI GAWTC 4 cut(s) 1717, 1751, 2369, 2874
TscAI CASTG 6 cut(s) 83, 403, 457, 630, 688, 1369
TseFI GTSAC 3 cut(s) 292, 2486, 2960
TseI GCWGC 5 cut(s) 81, 158, 2003, 2173, 2792
Tsp45I GTSAC 3 cut(s) 292, 2486, 2960
TspGWI ACGGA 1 cut(s) 1600
TspRI CASTG 6 cut(s) 83, 403, 457, 630, 688, 1369
VneI GTGCAC 1 cut(s) 202
VpaK11BI GGWCC 9 cut(s) 470, 902, 1775, 2054, 2279, 2422, 2724, 2841, 2994
VspI ATTAAT 1 cut(s) 875
XapI RAATTY 5 cut(s) 352, 1292, 1328, 2138, 2299
XbaI TCTAGA 3 cut(s) 520, 1000, 1711
XceI RCATGY 3 cut(s) 535, 1146, 1253
XcmI CCANNNNNNNNNTGG 1 cut(s) 1344
XmaJI CCTAGG 2 cut(s) 487, 2332
XmiI GTMKAC 3 cut(s) 195, 2061, 2071
XmnI GAANNNNTTC 3 cut(s) 546, 1163, 1947
XspI CTAG 7 cut(s) 71, 488, 521, 771, 1001, 1712, 2333
ZrmI AGTACT 3 cut(s) 1022, 1241, 2932
Zsp2I ATGCAT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.