RchiOBHm_Chr5g0012191

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8123483 .. 8123994
512 bp
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UTR
Exon/CDS
Intron
PRQ29279

Sequence Viewer

Length: 285 bp
ATGGTTAAAGTAGCTCTGCTATGCATCAATCCGGTAGCTGCACTCAGGCCTACCCTGTCTGCAGTCGTGAGTATGCTTGAAGGGCGAACCGCTGTCGATGAATTGATTATGGATCCAAAAATATATAGTGAAGAAATGAGGTTAACAGCCTTGAGAAATCCATTTGAGCAGATTGCACAAGAGAGAGCAGGTGGAAGTCAAAGCTTGATACATTCGTCCGATGCATCATGGAATGATTCTTCTGCTCCTACTATATCTTCAGATCTCTATATAACCAATCCTTAG

Protein Analysis

94

Amino Acids

10.2

Weight (kDa)

4.72

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 179
Acc36I ACCTGC 1 cut(s) 179
AciI CCGC 1 cut(s) 90
AclWI GGATC 2 cut(s) 107, 120
AcuI CTGAAG 1 cut(s) 243
AgsI TTSAA 1 cut(s) 80
AluBI AGCT 3 cut(s) 14, 38, 204
AluI AGCT 3 cut(s) 14, 38, 204
AlwI GGATC 2 cut(s) 107, 120
AoxI GGCC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 38
BaeI ACNNNNGTAYC 2 cut(s) 200, 233
BamHI GGATCC 1 cut(s) 112
BbvI GCAGC 1 cut(s) 25
BfmI CTRYAG 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 179
BglII AGATCT 1 cut(s) 262
BisI GCNGC 1 cut(s) 39
BlsI GCNGC 1 cut(s) 40
BmiI GGNNCC 1 cut(s) 114
BmsI GCATC 3 cut(s) 33, 211, 233
BpuEI CTTGAG 1 cut(s) 172
BsaWI WCCGGW 1 cut(s) 31
BseMII CTCAG 1 cut(s) 58
BseXI GCAGC 1 cut(s) 25
BsgI GTGCAG 1 cut(s) 24
BshFI GGCC 1 cut(s) 49
BsiSI CCGG 1 cut(s) 32
BsnI GGCC 1 cut(s) 49
Bsp143I GATC 2 cut(s) 112, 262
BspACI CCGC 1 cut(s) 90
BspANI GGCC 1 cut(s) 49
BspCNI CTCAG 1 cut(s) 57
BspLI GGNNCC 1 cut(s) 114
BspMAI CTGCAG 1 cut(s) 64
BspMI ACCTGC 1 cut(s) 179
BspPI GGATC 2 cut(s) 107, 120
BssMI GATC 2 cut(s) 112, 262
BstDEI CTNAG 2 cut(s) 44, 282
BstKTI GATC 2 cut(s) 115, 265
BstMBI GATC 2 cut(s) 112, 262
BstMWI GCNNNNNNNGC 1 cut(s) 82
BstSFI CTRYAG 1 cut(s) 60
BstV1I GCAGC 1 cut(s) 25
BstX2I RGATCY 2 cut(s) 112, 262
BstYI RGATCY 2 cut(s) 112, 262
BsuRI GGCC 1 cut(s) 49
BveI ACCTGC 1 cut(s) 179
CviAII CATG 1 cut(s) 228
CviJI RGCY 5 cut(s) 14, 38, 49, 149, 204
CviKI_1 RGCY 5 cut(s) 14, 38, 49, 149, 204
DdeI CTNAG 2 cut(s) 44, 282
DpnI GATC 2 cut(s) 114, 264
DpnII GATC 2 cut(s) 112, 262
Eco147I AGGCCT 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 243
EcoT22I ATGCAT 2 cut(s) 26, 226
FaeI CATG 1 cut(s) 231
FaiI YATR 9 cut(s) 22, 74, 110, 124, 126, 229, 254, 270, 272
FatI CATG 1 cut(s) 227
Fnu4HI GCNGC 1 cut(s) 39
Fsp4HI GCNGC 1 cut(s) 39
GluI GCNGC 1 cut(s) 39
HaeIII GGCC 1 cut(s) 49
HapII CCGG 1 cut(s) 32
Hin1II CATG 1 cut(s) 231
HincII GTYRAC 1 cut(s) 144
HindII GTYRAC 1 cut(s) 144
HindIII AAGCTT 1 cut(s) 202
HinfI GANTC 1 cut(s) 236
HpaI GTTAAC 1 cut(s) 144
HpaII CCGG 1 cut(s) 32
Hpy166II GTNNAC 1 cut(s) 144
Hpy188I TCNGA 2 cut(s) 220, 262
Hpy188III TCNNGA 1 cut(s) 67
Hpy8I GTNNAC 1 cut(s) 144
HpyAV CCTTC 1 cut(s) 74
HpyCH4V TGCA 5 cut(s) 24, 41, 62, 176, 224
HpyF10VI GCNNNNNNNGC 1 cut(s) 82
HpyF3I CTNAG 2 cut(s) 44, 282
Hsp92II CATG 1 cut(s) 231
KspAI GTTAAC 1 cut(s) 144
Kzo9I GATC 2 cut(s) 112, 262
LmnI GCTCC 1 cut(s) 250
LpnPI CCDG 4 cut(s) 31, 45, 68, 174
Lsp1109I GCAGC 1 cut(s) 25
LweI GCATC 3 cut(s) 33, 211, 233
MalI GATC 2 cut(s) 114, 264
MboI GATC 2 cut(s) 112, 262
MboII GAAGA 3 cut(s) 143, 231, 249
MflI RGATCY 2 cut(s) 112, 262
MluCI AATT 1 cut(s) 101
MnlI CCTC 1 cut(s) 132
Mph1103I ATGCAT 2 cut(s) 26, 226
MseI TTAA 2 cut(s) 6, 143
MspA1I CMGCKG 1 cut(s) 92
MspI CCGG 1 cut(s) 32
MwoI GCNNNNNNNGC 1 cut(s) 82
NdeII GATC 2 cut(s) 112, 262
NlaIII CATG 1 cut(s) 231
NlaIV GGNNCC 1 cut(s) 114
NsiI ATGCAT 2 cut(s) 26, 226
PaqCI CACCTGC 1 cut(s) 179
PceI AGGCCT 1 cut(s) 49
PfeI GAWTC 1 cut(s) 236
PkrI GCNGC 1 cut(s) 40
PspN4I GGNNCC 1 cut(s) 114
PstI CTGCAG 1 cut(s) 64
PsuI RGATCY 2 cut(s) 112, 262
SaqAI TTAA 2 cut(s) 6, 143
SatI GCNGC 1 cut(s) 39
Sau3AI GATC 2 cut(s) 112, 262
SetI ASST 5 cut(s) 16, 40, 143, 193, 206
SfaNI GCATC 3 cut(s) 33, 211, 233
SfcI CTRYAG 1 cut(s) 60
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 1 cut(s) 101
SseBI AGGCCT 1 cut(s) 49
SsiI CCGC 1 cut(s) 90
StuI AGGCCT 1 cut(s) 49
TaqI TCGA 1 cut(s) 96
TasI AATT 1 cut(s) 101
TfiI GAWTC 1 cut(s) 236
Tru1I TTAA 2 cut(s) 6, 143
Tru9I TTAA 2 cut(s) 6, 143
TseI GCWGC 1 cut(s) 38
TspDTI ATGAA 1 cut(s) 114
Zsp2I ATGCAT 2 cut(s) 26, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.