Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000128.1

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

64988 .. 67015

Gene Structure 2028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000128.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 768 bp

atggcgcctgaatatgcactatggggttatttaacatacaaagcagatgtatacagttttggtgttgtcgcattggaaattgttgttggaaagaacaacatgaaatttcgagcagatgagaactttgtaggccttgtggattgggcccttgttttacaacaaaaagggaatctaatggagctggtggatccaaggctggggtccgatttcagcaaggaagaggcaattagaatggtcaaagtagctctgctatgcaccaatccggcaccagcacttaggcctacgatgtctgcagtagtgagtatgcttgaagggaggagcgttgttcctgaattgattatggatccaagtatctatggtgatgagacgaggttgacagccttgagggaccggtttgagaagtttgcagcagaagacagctcatcaagtggaactcagagcttcttgcgtggatcagatgcaacatcgattggttgttctgctactgctacatcttcagatctctacaaagttagtcctacttcttacggaggggatccaggcggagatggctgcgcgcggcttgcaggagggaggccggaggcatctcggatggttctaggcagcgttcaaggtcggaggaggtcggggttgcaggttttgggcagcaacccgacctgcaactgcaggttttctgggcagcgctgcaacgacgtcgccggcgcctccacagactgcagacctctccgcgcgacccctagtgtccttccggcaacccccgacgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

255

Amino Acids

27.22

Weight (kDa)

5.68

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	696, 765
Acc36I	ACCTGC	3 cut(s)	625, 657, 665
AccB1I	GGYRCC	3 cut(s)	4, 265, 701
AccI	GTMKAC	1 cut(s)	51
AccII	CGCG	4 cut(s)	557, 559, 729, 731
AciI	CCGC	3 cut(s)	543, 559, 727
AclWI	GGATC	7 cut(s)	182, 195, 338, 351, 460, 530, 543
AcsI	RAATTY	1 cut(s)	104
AcuI	CTGAAG	1 cut(s)	480
AcyI	GRCGYC	4 cut(s)	5, 693, 702, 762
AfeI	AGCGCT	1 cut(s)	683
AfiI	CCNNNNNNNGG	1 cut(s)	197
AgeI	ACCGGT	1 cut(s)	390
AgsI	TTSAA	2 cut(s)	311, 611
AjnI	CCWGG	1 cut(s)	538
AjuI	GAANNNNNNNTTGG	2 cut(s)	69, 101
AluBI	AGCT	4 cut(s)	181, 245, 420, 441
AluI	AGCT	4 cut(s)	181, 245, 420, 441
Alw26I	GTCTC	1 cut(s)	359
AlwI	GGATC	7 cut(s)	182, 195, 338, 351, 460, 530, 543
Aor51HI	AGCGCT	1 cut(s)	683
AoxI	GGCC	4 cut(s)	130, 144, 278, 575
ApaI	GGGCCC	1 cut(s)	148
ApeKI	GCWGC	6 cut(s)	407, 552, 603, 645, 679, 684
ApoI	RAATTY	1 cut(s)	104
AsiGI	ACCGGT	1 cut(s)	390
AspLEI	GCGC	6 cut(s)	7, 557, 559, 684, 704, 731
AspS9I	GGNCC	4 cut(s)	144, 145, 201, 388
AsuHPI	GGTGA	1 cut(s)	371
AvaII	GGWCC	2 cut(s)	201, 388
BaeGI	GKGCMC	1 cut(s)	148
BamHI	GGATCC	3 cut(s)	187, 343, 535
BanI	GGYRCC	3 cut(s)	4, 265, 701
BanII	GRGCYC	1 cut(s)	148
BbsI	GAAGAC	1 cut(s)	420
BbvI	GCAGC	6 cut(s)	419, 539, 615, 657, 671, 691
BccI	CCATC	2 cut(s)	542, 586
BcgI	CGANNNNNNTGC	2 cut(s)	676, 710
BciT130I	CCWGG	1 cut(s)	540
BcoDI	GTCTC	1 cut(s)	359
BfaI	CTAG	2 cut(s)	599, 738
BfmI	CTRYAG	3 cut(s)	291, 664, 715
BfoI	RGCGCY	3 cut(s)	8, 685, 705
BfuAI	ACCTGC	3 cut(s)	625, 657, 665
BglII	AGATCT	1 cut(s)	499
BisI	GCNGC	7 cut(s)	408, 553, 560, 604, 646, 680, 685
BlsI	GCNGC	7 cut(s)	409, 554, 561, 605, 647, 681, 686
Bme1390I	CCNGG	1 cut(s)	540
Bme18I	GGWCC	2 cut(s)	201, 388
BmgT120I	GGNCC	4 cut(s)	144, 145, 201, 388
BmiI	GGNNCC	9 cut(s)	6, 146, 189, 202, 267, 345, 389, 537, 703
BmrFI	CCNGG	1 cut(s)	540
BmsI	GCATC	2 cut(s)	448, 593
BpiI	GAAGAC	1 cut(s)	420
BpuEI	CTTGAG	1 cut(s)	403
Bsa29I	ATCGAT	1 cut(s)	467
BsaHI	GRCGYC	4 cut(s)	5, 693, 702, 762
BsaJI	CCNNGG	1 cut(s)	191
BsaWI	WCCGGW	1 cut(s)	390
Bsc4I	CCNNNNNNNGG	1 cut(s)	197
Bse118I	RCCGGY	2 cut(s)	390, 698
BseBI	CCWGG	1 cut(s)	540
BseCI	ATCGAT	1 cut(s)	467
BseDI	CCNNGG	1 cut(s)	191
BseGI	GGATG	1 cut(s)	597
BseLI	CCNNNNNNNGG	1 cut(s)	197
BseMII	CTCAG	1 cut(s)	449
BsePI	GCGCGC	1 cut(s)	555
BseRI	GAGGAG	2 cut(s)	331, 634
BseSI	GKGCMC	1 cut(s)	148
BseXI	GCAGC	6 cut(s)	419, 539, 615, 657, 671, 691
BseYI	CCCAGC	1 cut(s)	196
Bsh1236I	CGCG	4 cut(s)	557, 559, 729, 731
BshFI	GGCC	4 cut(s)	132, 146, 280, 577
BshNI	GGYRCC	3 cut(s)	4, 265, 701
BshTI	ACCGGT	1 cut(s)	390
BshVI	ATCGAT	1 cut(s)	467
BsiSI	CCGG	5 cut(s)	263, 391, 578, 699, 749
BslFI	GGGAC	1 cut(s)	401
BslI	CCNNNNNNNGG	1 cut(s)	197
BsmAI	GTCTC	1 cut(s)	359
BsmBI	CGTCTC	1 cut(s)	359
BsmFI	GGGAC	1 cut(s)	401
BsnI	GGCC	4 cut(s)	132, 146, 280, 577
Bsp120I	GGGCCC	1 cut(s)	144
Bsp1286I	GDGCHC	1 cut(s)	148
Bsp143I	GATC	5 cut(s)	187, 343, 452, 499, 535
BspACI	CCGC	3 cut(s)	543, 559, 727
BspANI	GGCC	4 cut(s)	132, 146, 280, 577
BspCNI	CTCAG	1 cut(s)	448
BspDI	ATCGAT	1 cut(s)	467
BspFNI	CGCG	4 cut(s)	557, 559, 729, 731
BspLI	GGNNCC	9 cut(s)	6, 146, 189, 202, 267, 345, 389, 537, 703
BspMAI	CTGCAG	3 cut(s)	295, 668, 719
BspMI	ACCTGC	3 cut(s)	625, 657, 665
BspPI	GGATC	7 cut(s)	182, 195, 338, 351, 460, 530, 543
BspT107I	GGYRCC	3 cut(s)	4, 265, 701
BsrFI	RCCGGY	2 cut(s)	390, 698
BssAI	RCCGGY	2 cut(s)	390, 698
BssECI	CCNNGG	1 cut(s)	191
BssHII	GCGCGC	1 cut(s)	555
BssMI	GATC	5 cut(s)	187, 343, 452, 499, 535
BssNAI	GTATAC	1 cut(s)	52
BssNI	GRCGYC	4 cut(s)	5, 693, 702, 762
BssT1I	CCWWGG	1 cut(s)	191
Bst1107I	GTATAC	1 cut(s)	52
Bst2UI	CCWGG	1 cut(s)	540
Bst4CI	ACNGT	1 cut(s)	56
Bst6I	CTCTTC	1 cut(s)	213
BstACI	GRCGYC	4 cut(s)	5, 693, 702, 762
BstC8I	GCNNGC	3 cut(s)	557, 564, 700
BstDEI	CTNAG	2 cut(s)	275, 435
BstF5I	GGATG	1 cut(s)	597
BstFNI	CGCG	4 cut(s)	557, 559, 729, 731
BstH2I	RGCGCY	3 cut(s)	8, 685, 705
BstHHI	GCGC	6 cut(s)	7, 557, 559, 684, 704, 731
BstKTI	GATC	5 cut(s)	190, 346, 455, 502, 538
BstMAI	GTCTC	1 cut(s)	359
BstMBI	GATC	5 cut(s)	187, 343, 452, 499, 535
BstMWI	GCNNNNNNNGC	2 cut(s)	549, 563
BstNI	CCWGG	1 cut(s)	540
BstSCI	CCNGG	1 cut(s)	538
BstSFI	CTRYAG	3 cut(s)	291, 664, 715
BstSLI	GKGCMC	1 cut(s)	148
BstUI	CGCG	4 cut(s)	557, 559, 729, 731
BstV1I	GCAGC	6 cut(s)	419, 539, 615, 657, 671, 691
BstV2I	GAAGAC	1 cut(s)	420
BstX2I	RGATCY	4 cut(s)	187, 343, 499, 535
BstYI	RGATCY	4 cut(s)	187, 343, 499, 535
BstZ17I	GTATAC	1 cut(s)	52
Bsu15I	ATCGAT	1 cut(s)	467
BsuRI	GGCC	4 cut(s)	132, 146, 280, 577
BsuTUI	ATCGAT	1 cut(s)	467
BtsCI	GGATG	1 cut(s)	597
BveI	ACCTGC	3 cut(s)	625, 657, 665
Cac8I	GCNNGC	3 cut(s)	557, 564, 700
CfoI	GCGC	6 cut(s)	7, 557, 559, 684, 704, 731
Cfr10I	RCCGGY	2 cut(s)	390, 698
Cfr13I	GGNCC	4 cut(s)	144, 145, 201, 388
ClaI	ATCGAT	1 cut(s)	467
CspAI	ACCGGT	1 cut(s)	390
CviAII	CATG	1 cut(s)	100
DdeI	CTNAG	2 cut(s)	275, 435
DinI	GGCGCC	2 cut(s)	6, 703
DpnI	GATC	5 cut(s)	189, 345, 454, 501, 537
DpnII	GATC	5 cut(s)	187, 343, 452, 499, 535
Eam1104I	CTCTTC	1 cut(s)	213
EarI	CTCTTC	1 cut(s)	213
EciI	GGCGGA	1 cut(s)	558
Eco130I	CCWWGG	1 cut(s)	191
Eco147I	AGGCCT	2 cut(s)	132, 280
Eco24I	GRGCYC	1 cut(s)	148
Eco47I	GGWCC	2 cut(s)	201, 388
Eco47III	AGCGCT	1 cut(s)	683
Eco57I	CTGAAG	1 cut(s)	480
EcoO109I	RGGNCCY	1 cut(s)	145
EcoRII	CCWGG	1 cut(s)	538
EcoT14I	CCWWGG	1 cut(s)	191
EcoT38I	GRGCYC	1 cut(s)	148
EgeI	GGCGCC	2 cut(s)	6, 703
EheI	GGCGCC	2 cut(s)	6, 703
ErhI	CCWWGG	1 cut(s)	191
Esp3I	CGTCTC	1 cut(s)	359
FaeI	CATG	1 cut(s)	103
FaiI	YATR	9 cut(s)	15, 22, 37, 52, 101, 253, 305, 341, 357
FaqI	GGGAC	1 cut(s)	401
FatI	CATG	1 cut(s)	99
FblI	GTMKAC	1 cut(s)	51
Fnu4HI	GCNGC	7 cut(s)	408, 553, 560, 604, 646, 680, 685
FokI	GGATG	1 cut(s)	604
FriOI	GRGCYC	1 cut(s)	148
Fsp4HI	GCNGC	7 cut(s)	408, 553, 560, 604, 646, 680, 685
FspBI	CTAG	2 cut(s)	599, 738
GlaI	GCGC	6 cut(s)	6, 556, 558, 683, 703, 730
GluI	GCNGC	7 cut(s)	408, 553, 560, 604, 646, 680, 685
GsaI	CCCAGC	1 cut(s)	200
HaeII	RGCGCY	3 cut(s)	8, 685, 705
HaeIII	GGCC	4 cut(s)	132, 146, 280, 577
HapII	CCGG	5 cut(s)	263, 391, 578, 699, 749
HhaI	GCGC	6 cut(s)	7, 557, 559, 684, 704, 731
Hin1I	GRCGYC	4 cut(s)	5, 693, 702, 762
Hin1II	CATG	1 cut(s)	103
Hin6I	GCGC	6 cut(s)	5, 555, 557, 682, 702, 729
HinP1I	GCGC	6 cut(s)	5, 555, 557, 682, 702, 729
HincII	GTYRAC	1 cut(s)	375
HindII	GTYRAC	1 cut(s)	375
HinfI	GANTC	1 cut(s)	169
HpaII	CCGG	5 cut(s)	263, 391, 578, 699, 749
HphI	GGTGA	1 cut(s)	371
Hpy166II	GTNNAC	2 cut(s)	52, 375
Hpy188I	TCNGA	7 cut(s)	205, 438, 457, 499, 591, 618, 767
Hpy188III	TCNNGA	1 cut(s)	329
Hpy8I	GTNNAC	2 cut(s)	52, 375
Hpy99I	CGWCG	3 cut(s)	695, 698, 764
HpyAV	CCTTC	2 cut(s)	305, 755
HpyCH4III	ACNGT	1 cut(s)	56
HpyCH4IV	ACGT	2 cut(s)	693, 762
HpyF10VI	GCNNNNNNNGC	2 cut(s)	549, 563
HpyF3I	CTNAG	2 cut(s)	275, 435
HpySE526I	ACGT	2 cut(s)	693, 762
Hsp92I	GRCGYC	4 cut(s)	5, 693, 702, 762
Hsp92II	CATG	1 cut(s)	103
HspAI	GCGC	6 cut(s)	5, 555, 557, 682, 702, 729
KasI	GGCGCC	2 cut(s)	4, 701
KroI	GCCGGC	1 cut(s)	698
KroNI	GCCGGC	1 cut(s)	700
Kzo9I	GATC	5 cut(s)	187, 343, 452, 499, 535
LmnI	GCTCC	2 cut(s)	178, 318
Lsp1109I	GCAGC	6 cut(s)	419, 539, 615, 657, 671, 691
LweI	GCATC	2 cut(s)	448, 593
MaeI	CTAG	2 cut(s)	599, 738
MaeII	ACGT	2 cut(s)	693, 762
MalI	GATC	5 cut(s)	189, 345, 454, 501, 537
MboI	GATC	5 cut(s)	187, 343, 452, 499, 535
MboII	GAAGA	3 cut(s)	230, 425, 486
MflI	RGATCY	4 cut(s)	187, 343, 499, 535
MhlI	GDGCHC	1 cut(s)	148
MluCI	AATT	4 cut(s)	78, 104, 225, 332
Mly113I	GGCGCC	2 cut(s)	5, 702
MmeI	TCCRAC	2 cut(s)	67, 596
MreI	CGCCGGCG	1 cut(s)	698
MroNI	GCCGGC	1 cut(s)	698
MseI	TTAA	1 cut(s)	32
MspI	CCGG	5 cut(s)	263, 391, 578, 699, 749
MspR9I	CCNGG	1 cut(s)	540
MvaI	CCWGG	1 cut(s)	540
MvnI	CGCG	4 cut(s)	557, 559, 729, 731
MwoI	GCNNNNNNNGC	2 cut(s)	549, 563
NaeI	GCCGGC	1 cut(s)	700
NarI	GGCGCC	2 cut(s)	5, 702
NdeII	GATC	5 cut(s)	187, 343, 452, 499, 535
NgoMIV	GCCGGC	1 cut(s)	698
NlaIII	CATG	1 cut(s)	103
NlaIV	GGNNCC	9 cut(s)	6, 146, 189, 202, 267, 345, 389, 537, 703
PauI	GCGCGC	1 cut(s)	555
PceI	AGGCCT	2 cut(s)	132, 280
PdiI	GCCGGC	1 cut(s)	700
PfeI	GAWTC	1 cut(s)	169
PinAI	ACCGGT	1 cut(s)	390
PkrI	GCNGC	7 cut(s)	409, 554, 561, 605, 647, 681, 686
PluTI	GGCGCC	2 cut(s)	8, 705
Psp6I	CCWGG	1 cut(s)	538
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	1 cut(s)	538
PspN4I	GGNNCC	9 cut(s)	6, 146, 189, 202, 267, 345, 389, 537, 703
PspOMI	GGGCCC	1 cut(s)	144
PspPI	GGNCC	4 cut(s)	144, 145, 201, 388
PstI	CTGCAG	3 cut(s)	295, 668, 719
PsuI	RGATCY	4 cut(s)	187, 343, 499, 535
PteI	GCGCGC	1 cut(s)	555
SaqAI	TTAA	1 cut(s)	32
SatI	GCNGC	7 cut(s)	408, 553, 560, 604, 646, 680, 685
Sau3AI	GATC	5 cut(s)	187, 343, 452, 499, 535
Sau96I	GGNCC	4 cut(s)	144, 145, 201, 388
ScrFI	CCNGG	1 cut(s)	540
SduI	GDGCHC	1 cut(s)	148
SfaNI	GCATC	2 cut(s)	448, 593
SfcI	CTRYAG	3 cut(s)	291, 664, 715
SfoI	GGCGCC	2 cut(s)	6, 703
SgrAI	CRCCGGYG	1 cut(s)	698
SinI	GGWCC	2 cut(s)	201, 388
SmlI	CTYRAG	1 cut(s)	382
SmoI	CTYRAG	1 cut(s)	382
Sse9I	AATT	4 cut(s)	78, 104, 225, 332
SseBI	AGGCCT	2 cut(s)	132, 280
SsiI	CCGC	3 cut(s)	543, 559, 727
SspDI	GGCGCC	2 cut(s)	4, 701
SspMI	CTAG	2 cut(s)	599, 738
StuI	AGGCCT	2 cut(s)	132, 280
StyD4I	CCNGG	1 cut(s)	538
StyI	CCWWGG	1 cut(s)	191
TaaI	ACNGT	1 cut(s)	56
TaiI	ACGT	2 cut(s)	696, 765
TaqI	TCGA	2 cut(s)	109, 467
TasI	AATT	4 cut(s)	78, 104, 225, 332
TauI	GCSGC	1 cut(s)	562
TfiI	GAWTC	1 cut(s)	169
Tru1I	TTAA	1 cut(s)	32
Tru9I	TTAA	1 cut(s)	32
TseI	GCWGC	6 cut(s)	407, 552, 603, 645, 679, 684
TspDTI	ATGAA	1 cut(s)	116
TspGWI	ACGGA	1 cut(s)	543
VpaK11BI	GGWCC	2 cut(s)	201, 388
XapI	RAATTY	1 cut(s)	104
XmiI	GTMKAC	1 cut(s)	51
XspI	CTAG	2 cut(s)	599, 738
ZraI	GACGTC	2 cut(s)	694, 763

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.