Rroxscaffold_1G00064430

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
86228519 .. 86235865
7347 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00064430.1

Sequence Viewer

Length: 2967 bp
ATGAAGATGGCAATCGGAGCTGGGCTACTTCTTCCTAATAGTCGTCGGAAAACCTTCATGAACCTCATCGTAGTGGTGATACTGGTTCTCTGCAATACTGGATTACTCAACGTTGAAGCGCTTACAACTCGTCTTCCTGCTTCTGAAGTTGAAGCCCTAGAAGAAATTGCTACACAAATAGGGAAAAAAGACTGGGACTTCTCAGTAGACCCGTGCCTGAATGACACAACCCACACAAGCTGGGCTACCCCAAAGCCTGCTGACAGGCCTCTATTCAACAACACCCTCACTTGCAACTGCTCCTTCCCTGATGGCTCGTGTCATGTCATTAACATTATTCTTAGAGGGCAAGATCTTGCTGGTGTTCTTCCACCATCTATTGCAAAGTTACCCTACCTTACACAAATGAACCTTGAGACTAACATGTTTTCTGGAACTGTTCCTCCTGAGCTTGGGAAGTTGGTTAACTTGCAGAATCTCATTATTAGTACAAACAATCTCACAGGAGTGTTGCCAGTGAATCTCACTAGACTGAGCAAATTAGCAGAATTGAGAATTAGCAGTAACAACTTCACAGGAAGAATTCCGGATTATTTCCTGAGTTGGAATCAACTTACGCAATTGGAGATCCAAGCTAGTGGTTTACAAGGCCCCATTCCAGCTAGCATTTCTATCTTGAGTAATTTAACAGAACTAAGGATCAGTGACCTAAATGGAGGTGGTTCAGTGTTTCCAAACTTAAGTAATATGACAAGCTTGCAAAGATTAATGCTGAGGAGCTGTGATTTATCCGGACCTATTCCTGATTTATCAGCAATGACAGCATTGAATATCTTAGATCTCAGCTTCAACAAATTGGAAGGAAGTATTCCTGATCTTGAAGATCTTACTGAGAAGAACAGATTGCAGTACTTGTATTTGACAAGCAACTTGCTCAATGGCTCTATTCCAGAATGGATTAAGAACAGAGATAACCGCTACCAAATAGATGTTTCTTACAATAATTTTTCAAAGATCTCTGAGCCATCTACATGTAGCGAATACCTGAATGTCTTCAAAAGCTCTGCTGTACCAAACAACACATTATCCGGAGCGTGCCTGGACAAATTTCCATGTACAGAAGTTCAGTACTCATTGCATATAAACTGTGGTGGGAGAGCAACCACCATTGGAGACATCAAATTCGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTGTTCCGACGAGACCTAACTGGGGAGTCAGTAGCTCTGGATTTTTCTGGGATACTGACCTCACCTCTAAAGACTACATAGCAAATAATGTATCAACACTTGGAATGGAAAACTCTCAGTTGTACACTAATGCACGCCTCACTCCTCTTTCTCTCACATATTATGCAAACTGCTTAGGAGATGGAAAGTATACTGTGAAACTTCACTTTGCGGAGATAATAATCCGAGCCAATAGATCTTTTTACAGTGTTGGAAGACGGATATTTGATGTCTATATTCAGGAGAAACTTGTATGGAAGGATTTTGACATCGTAAAGGAAGCACAAGGGGTTGATAAGGTATACATTATGGAAACAAATGCAGTTCAAGTTACAAACAAAACTTTAGAGATTCGGTTTCATTGGTCTGGAAAAGGCACGACAGCATCCCCTAGACGAGGAGTCTATGGACCCCTTATATCAGCCATTTCTATCGAGTCTGAGTTCAAGCCTCCTAAAACTCATGACAGCAAAAGAAGGATGTATATTGTGGTTGGAGTTTCAGTTGGAGCTTCAGTTTTGTGCCTCTTCTTCATCATTTTTGGCATTCTTTGGTGGAAAGGCTGTCTGCTGGATAGCCAGACATCACGGGAAGAAGCTCTGAGAGGACTAGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCAACTAATAACTTTGATCCTTTAAATAAAATTGGGGAAGGTGGTTTTGGTTGTGTCTACAAGGGCATATTATTGGATGGCACTACAATTGCAGTTAAGCAGCTCTCTTCAAAATCAAAGCAAGGAAATCGTGAGTTCGTGAATGAAATAGGCATGATATCTGGTTTACAACATCCAAATGTGGTTAGGTTATACGGTTGCTGTATTGAAGGAAATCAATTACTATTGGTATACGAATACATGGAAAATAACAGCCTTGCGCATTCTTTGTTTGGGGAAGAGAAAGGCGTCCTAACACTGGACTGGCCTACAAGGCAAAAAGTATGCCTAGGCATAGCAAGAGGTTTGGCTTTTCTACACGAGGAATCAACACTGAAGGTTGTACATAGAGACATCAAAGCTACGAATGTACTACTGGACCAAGACCTGAATGCTAAGATTTCGGACTTTGGTTTAGCCAAGCTTGACGAAGAGGAGAACACACATATTAGCACAAGAATTGCTGGAACTATAGGTTATATGGCACCGGAATATGCACTCTGGGGTTGTTTGACCTACAAAGCTGATGTCTACAGTTTTGGTGTTGTTGCACTGGAAATTGTTGCCGGAAAGAACAACATGAAGTTTCGACCAAATGATGATTTTGTATGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATTTAAAGGAGCTGGTGGATCAGCGGCTCGGATCAGATTTCAACGAGGAACAAGCGATTAGAATGGCTAAAGTAGCTTTGTTATGCACCAATTCAGCACCATCGCTTAGGCCTACCATGTCCGTAGTAGTGAGCATGCTAGAAGGGCGGACCTCCGTCCCTGAGTTGATCATGGATCCTAGCATTTATGGTGATAAAATGAGGATGTCAGCCTTGAGACAACAGTTTGATCAAATTGTAAATGACAGCTCAATTCGATCTCAAACGAGCTACACTGATTCTCAGAGCCACCTCCGTTCATCAGATGTACCATGGACTGGTTCTTCGGGTACTACTACATCTTCAGATCTCTACAAACTTAATCCTTAG

Protein Analysis

988

Amino Acids

109.45

Weight (kDa)

5.97

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 129 - 233 7.8e-06 Leucine-rich repeat region
Malectin PF11721 378 - 562 1.5e-36 Malectin domain
Pkinase PF00069 645 - 907 1.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 646 - 912 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2172
AccB1I GGYRCC 1 cut(s) 2434
AccB7I CCANNNNNTGG 1 cut(s) 2915
AccI GTMKAC 6 cut(s) 207, 1409, 1560, 1968, 2142, 2481
AccIII TCCGGA 3 cut(s) 586, 791, 1088
AciI CCGC 4 cut(s) 976, 1430, 2623, 2746
AclI AACGTT 1 cut(s) 111
AclWI GGATC 7 cut(s) 622, 707, 1922, 2625, 2638, 2768, 2781
AcsI RAATTY 5 cut(s) 582, 1106, 1181, 1217, 2599
AcuI CTGAAG 4 cut(s) 165, 1755, 2306, 2925
AcyI GRCGYC 1 cut(s) 2199
AfeI AGCGCT 1 cut(s) 120
AfiI CCNNNNNNNGG 5 cut(s) 452, 1241, 1655, 2209, 2915
AflII CTTAAG 1 cut(s) 739
AflIII ACRYGT 2 cut(s) 423, 1031
AhdI GACNNNNNGTC 1 cut(s) 1658
AjnI CCWGG 1 cut(s) 1098
AjuI GAANNNNNNNTTGG 2 cut(s) 1941, 1973
AleI CACNNNNGTG 1 cut(s) 506
AloI GAACNNNNNNTCC 2 cut(s) 427, 459
Alw26I GTCTC 5 cut(s) 410, 1167, 1225, 2295, 2809
AlwI GGATC 7 cut(s) 622, 707, 1922, 2625, 2638, 2768, 2781
Aor13HI TCCGGA 3 cut(s) 586, 791, 1088
Aor51HI AGCGCT 1 cut(s) 120
AoxI GGCC 5 cut(s) 266, 649, 2216, 2574, 2708
ApaI GGGCCC 1 cut(s) 2578
ApeKI GCWGC 2 cut(s) 1910, 2011
ApoI RAATTY 5 cut(s) 582, 1106, 1181, 1217, 2599
ArsI GACNNNNNNTTYG 6 cut(s) 1166, 1198, 2463, 2495, 2905, 2937
AseI ATTAAT 1 cut(s) 767
Asp700I GAANNNNTTC 2 cut(s) 53, 1052
AspA2I CCTAGG 1 cut(s) 2239
AspLEI GCGC 2 cut(s) 121, 2173
AspS9I GGNCC 7 cut(s) 650, 794, 1667, 2329, 2574, 2575, 2748
AsuHPI GGTGA 4 cut(s) 88, 1273, 1882, 2801
AsuII TTCGAA 1 cut(s) 1185
AsuNHI GCTAGC 1 cut(s) 662
AvaII GGWCC 4 cut(s) 794, 1667, 2329, 2748
AvrII CCTAGG 1 cut(s) 2239
BaeGI GKGCMC 1 cut(s) 2578
BamHI GGATCC 1 cut(s) 2773
BanI GGYRCC 1 cut(s) 2434
BanII GRGCYC 1 cut(s) 2578
BauI CACGAG 2 cut(s) 316, 2270
BbsI GAAGAC 3 cut(s) 125, 1045, 1480
BbvCI CCTCAGC 1 cut(s) 773
BbvI GCAGC 2 cut(s) 1897, 2023
BccI CCATC 6 cut(s) 305, 382, 1033, 1394, 1982, 2707
BcgI CGANNNNNNTGC 2 cut(s) 2021, 2055
BciT130I CCWGG 1 cut(s) 1100
BciVI GTATCC 1 cut(s) 1264
BclI TGATCA 2 cut(s) 2766, 2827
BcoDI GTCTC 5 cut(s) 410, 1167, 1225, 2295, 2809
BfaI CTAG 9 cut(s) 158, 528, 636, 663, 1650, 1868, 2240, 2738, 2778
BfmI CTRYAG 3 cut(s) 1874, 2421, 2482
BfoI RGCGCY 1 cut(s) 122
BfrI CTTAAG 1 cut(s) 739
BfuI GTATCC 1 cut(s) 1264
BglI GCCNNNNNGGC 1 cut(s) 2224
BglII AGATCT 8 cut(s) 352, 838, 883, 1014, 1198, 1454, 1870, 2944
BisI GCNGC 3 cut(s) 1911, 2012, 2624
BlnI CCTAGG 1 cut(s) 2239
BlsI GCNGC 3 cut(s) 1912, 2013, 2625
BmcAI AGTACT 2 cut(s) 911, 1130
Bme1390I CCNGG 1 cut(s) 1100
Bme18I GGWCC 4 cut(s) 794, 1667, 2329, 2748
BmeRI GACNNNNNGTC 1 cut(s) 1658
BmgT120I GGNCC 7 cut(s) 650, 794, 1667, 2329, 2574, 2575, 2748
BmiI GGNNCC 5 cut(s) 652, 1669, 2436, 2576, 2775
BmrFI CCNGG 1 cut(s) 1100
BmrI ACTGGG 2 cut(s) 202, 1249
BmsI GCATC 1 cut(s) 1652
BmtI GCTAGC 1 cut(s) 666
BmuI ACTGGG 2 cut(s) 202, 1249
BoxI GACNNNNGTC 1 cut(s) 2753
BpiI GAAGAC 3 cut(s) 125, 1045, 1480
Bpu10I CCTNAGC 4 cut(s) 447, 773, 1393, 2705
Bpu14I TTCGAA 1 cut(s) 1185
BpuEI CTTGAG 4 cut(s) 434, 697, 1915, 2833
BsaBI GATNNNNATC 3 cut(s) 11, 1197, 1439
BsaHI GRCGYC 1 cut(s) 2199
BsaI GGTCTC 1 cut(s) 1225
BsaJI CCNNGG 2 cut(s) 2239, 2909
BsaWI WCCGGW 4 cut(s) 586, 791, 1088, 2437
BsaXI ACNNNNNCTCC 6 cut(s) 427, 457, 1746, 1758, 1776, 1788
Bsc4I CCNNNNNNNGG 5 cut(s) 452, 1241, 1655, 2209, 2915
Bse3DI GCAATG 2 cut(s) 822, 1133
Bse8I GATNNNNATC 3 cut(s) 11, 1197, 1439
BseAI TCCGGA 3 cut(s) 586, 791, 1088
BseBI CCWGG 1 cut(s) 1100
BseDI CCNNGG 2 cut(s) 2239, 2909
BseGI GGATG 5 cut(s) 1643, 1743, 1993, 2083, 2808
BseJI GATNNNNATC 3 cut(s) 11, 1197, 1439
BseLI CCNNNNNNNGG 5 cut(s) 452, 1241, 1655, 2209, 2915
BseMI GCAATG 2 cut(s) 822, 1133
BseRI GAGGAG 4 cut(s) 790, 1353, 1671, 2399
BseSI GKGCMC 1 cut(s) 2578
BseXI GCAGC 2 cut(s) 1897, 2023
BseYI CCCAGC 2 cut(s) 20, 240
BshFI GGCC 5 cut(s) 268, 651, 2218, 2576, 2710
BshNI GGYRCC 1 cut(s) 2434
BsiSI CCGG 5 cut(s) 587, 792, 1089, 2438, 2517
BslFI GGGAC 2 cut(s) 209, 2741
BslI CCNNNNNNNGG 5 cut(s) 452, 1241, 1655, 2209, 2915
BsmAI GTCTC 5 cut(s) 410, 1167, 1225, 2295, 2809
BsmFI GGGAC 2 cut(s) 209, 2741
BsmI GAATGC 3 cut(s) 1803, 2173, 2347
BsnI GGCC 5 cut(s) 268, 651, 2218, 2576, 2710
Bso31I GGTCTC 1 cut(s) 1225
Bsp119I TTCGAA 1 cut(s) 1185
Bsp120I GGGCCC 1 cut(s) 2574
Bsp1286I GDGCHC 1 cut(s) 2578
Bsp13I TCCGGA 3 cut(s) 586, 791, 1088
Bsp1407I TGTACA 3 cut(s) 1115, 1341, 2293
Bsp19I CCATGG 1 cut(s) 2909
BspACI CCGC 4 cut(s) 976, 1430, 2623, 2746
BspANI GGCC 5 cut(s) 268, 651, 2218, 2576, 2710
BspEI TCCGGA 3 cut(s) 586, 791, 1088
BspHI TCATGA 2 cut(s) 57, 1720
BspLI GGNNCC 5 cut(s) 652, 1669, 2436, 2576, 2775
BspMAI CTGCAG 1 cut(s) 1878
BspOI GCTAGC 1 cut(s) 666
BspPI GGATC 7 cut(s) 622, 707, 1922, 2625, 2638, 2768, 2781
BspT104I TTCGAA 1 cut(s) 1185
BspT107I GGYRCC 1 cut(s) 2434
BspTI CTTAAG 1 cut(s) 739
BspTNI GGTCTC 1 cut(s) 1225
BsrDI GCAATG 2 cut(s) 822, 1133
BsrGI TGTACA 3 cut(s) 1115, 1341, 2293
BssECI CCNNGG 2 cut(s) 2239, 2909
BssNAI GTATAC 3 cut(s) 1410, 1561, 2143
BssNI GRCGYC 1 cut(s) 2199
BssSI CACGAG 2 cut(s) 316, 2270
BssT1I CCWWGG 2 cut(s) 2239, 2909
Bst1107I GTATAC 3 cut(s) 1410, 1561, 2143
Bst2BI CACGAG 2 cut(s) 316, 2270
Bst2UI CCWGG 1 cut(s) 1100
Bst4CI ACNGT 7 cut(s) 439, 1148, 1414, 1466, 2108, 2486, 2823
Bst6I CTCTTC 4 cut(s) 1790, 2023, 2184, 2376
BstACI GRCGYC 1 cut(s) 2199
BstAFI CTTAAG 1 cut(s) 739
BstAUI TGTACA 3 cut(s) 1115, 1341, 2293
BstBI TTCGAA 1 cut(s) 1185
BstC8I GCNNGC 6 cut(s) 258, 664, 758, 1096, 1354, 2735
BstDSI CCRYGG 1 cut(s) 2909
BstENI CCTNNNNNAGG 1 cut(s) 1653
BstF5I GGATG 5 cut(s) 1643, 1743, 1993, 2083, 2808
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 2 cut(s) 121, 2173
BstMAI GTCTC 5 cut(s) 410, 1167, 1225, 2295, 2809
BstMWI GCNNNNNNNGC 5 cut(s) 17, 821, 2224, 2672, 2743
BstNI CCWGG 1 cut(s) 1100
BstNSI RCATGY 3 cut(s) 427, 1035, 2737
BstPAI GACNNNNGTC 1 cut(s) 2753
BstSCI CCNGG 1 cut(s) 1098
BstSFI CTRYAG 3 cut(s) 1874, 2421, 2482
BstSLI GKGCMC 1 cut(s) 2578
BstV1I GCAGC 2 cut(s) 1897, 2023
BstV2I GAAGAC 3 cut(s) 125, 1045, 1480
BstXI CCANNNNNNTGG 1 cut(s) 638
BstZ17I GTATAC 3 cut(s) 1410, 1561, 2143
BsuI GTATCC 1 cut(s) 1264
BsuRI GGCC 5 cut(s) 268, 651, 2218, 2576, 2710
BtgI CCRYGG 1 cut(s) 2909
BtgZI GCGATG 1 cut(s) 2685
BtsCI GGATG 5 cut(s) 1643, 1743, 1993, 2083, 2808
BtsIMutI CAGTG 8 cut(s) 522, 709, 732, 1471, 2207, 2282, 2501, 2871
Cac8I GCNNGC 6 cut(s) 258, 664, 758, 1096, 1354, 2735
CciI TCATGA 2 cut(s) 57, 1720
CfoI GCGC 2 cut(s) 121, 2173
Cfr13I GGNCC 7 cut(s) 650, 794, 1667, 2329, 2574, 2575, 2748
CseI GACGC 1 cut(s) 2188
DraI TTTAAA 2 cut(s) 1935, 2604
DriI GACNNNNNGTC 1 cut(s) 1658
Eam1104I CTCTTC 4 cut(s) 1790, 2023, 2184, 2376
Eam1105I GACNNNNNGTC 1 cut(s) 1658
EarI CTCTTC 4 cut(s) 1790, 2023, 2184, 2376
EciI GGCGGA 1 cut(s) 2761
Eco130I CCWWGG 2 cut(s) 2239, 2909
Eco147I AGGCCT 2 cut(s) 268, 2710
Eco24I GRGCYC 1 cut(s) 2578
Eco31I GGTCTC 1 cut(s) 1225
Eco32I GATATC 1 cut(s) 2070
Eco47I GGWCC 4 cut(s) 794, 1667, 2329, 2748
Eco47III AGCGCT 1 cut(s) 120
Eco57I CTGAAG 4 cut(s) 165, 1755, 2306, 2925
EcoNI CCTNNNNNAGG 1 cut(s) 1653
EcoO109I RGGNCCY 2 cut(s) 650, 2575
EcoRI GAATTC 1 cut(s) 582
EcoRII CCWGG 1 cut(s) 1098
EcoRV GATATC 1 cut(s) 2070
EcoT14I CCWWGG 2 cut(s) 2239, 2909
EcoT38I GRGCYC 1 cut(s) 2578
ErhI CCWWGG 2 cut(s) 2239, 2909
FaqI GGGAC 2 cut(s) 209, 2741
FbaI TGATCA 2 cut(s) 2766, 2827
FblI GTMKAC 6 cut(s) 207, 1409, 1560, 1968, 2142, 2481
Fnu4HI GCNGC 3 cut(s) 1911, 2012, 2624
FokI GGATG 5 cut(s) 1630, 1750, 2000, 2070, 2815
FriOI GRGCYC 1 cut(s) 2578
Fsp4HI GCNGC 3 cut(s) 1911, 2012, 2624
FspBI CTAG 9 cut(s) 158, 528, 636, 663, 1650, 1868, 2240, 2738, 2778
FspI TGCGCA 1 cut(s) 2172
GlaI GCGC 2 cut(s) 120, 2172
GluI GCNGC 3 cut(s) 1911, 2012, 2624
GsaI CCCAGC 2 cut(s) 24, 244
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 5 cut(s) 268, 651, 2218, 2576, 2710
HapII CCGG 5 cut(s) 587, 792, 1089, 2438, 2517
HgaI GACGC 1 cut(s) 2188
HhaI GCGC 2 cut(s) 121, 2173
Hin1I GRCGYC 1 cut(s) 2199
Hin6I GCGC 2 cut(s) 119, 2171
HinP1I GCGC 2 cut(s) 119, 2171
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HindIII AAGCTT 2 cut(s) 754, 2372
HinfI GANTC 9 cut(s) 475, 520, 607, 1245, 1609, 1659, 1694, 2276, 2876
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 5 cut(s) 587, 792, 1089, 2438, 2517
HphI GGTGA 4 cut(s) 88, 1273, 1882, 2801
Hpy99I CGWCG 2 cut(s) 48, 1231
HpyAV CCTTC 9 cut(s) 64, 313, 854, 1510, 1728, 1943, 2114, 2281, 2735
HpyCH4III ACNGT 7 cut(s) 439, 1148, 1414, 1466, 2108, 2486, 2823
HpyCH4IV ACGT 1 cut(s) 111
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 821, 2224, 2672, 2743
HpySE526I ACGT 1 cut(s) 111
Hsp92I GRCGYC 1 cut(s) 2199
HspAI GCGC 2 cut(s) 119, 2171
Kpn2I TCCGGA 3 cut(s) 586, 791, 1088
Ksp22I TGATCA 2 cut(s) 2766, 2827
KspAI GTTAAC 1 cut(s) 466
LmnI GCTCC 7 cut(s) 17, 305, 777, 1091, 1211, 1766, 2608
Lsp1109I GCAGC 2 cut(s) 1897, 2023
LweI GCATC 1 cut(s) 1652
MaeI CTAG 9 cut(s) 158, 528, 636, 663, 1650, 1868, 2240, 2738, 2778
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 4 cut(s) 387, 563, 704, 1588
MfeI CAATTG 2 cut(s) 620, 1998
MhlI GDGCHC 1 cut(s) 2578
MlyI GAGTC 3 cut(s) 1254, 1668, 1703
MmeI TCCRAC 6 cut(s) 26, 584, 1250, 1450, 1732, 1744
MroI TCCGGA 3 cut(s) 586, 791, 1088
MroXI GAANNNNTTC 2 cut(s) 53, 1052
MslI CAYNNNNRTG 4 cut(s) 71, 506, 1030, 2088
MspA1I CMGCKG 1 cut(s) 2623
MspCI CTTAAG 1 cut(s) 739
MspI CCGG 5 cut(s) 587, 792, 1089, 2438, 2517
MspR9I CCNGG 1 cut(s) 1100
MunI CAATTG 2 cut(s) 620, 1998
Mva1269I GAATGC 3 cut(s) 1803, 2173, 2347
MvaI CCWGG 1 cut(s) 1100
MwoI GCNNNNNNNGC 5 cut(s) 17, 821, 2224, 2672, 2743
NcoI CCATGG 1 cut(s) 2909
NheI GCTAGC 1 cut(s) 662
NlaIV GGNNCC 5 cut(s) 652, 1669, 2436, 2576, 2775
NmuCI GTSAC 1 cut(s) 704
NsbI TGCGCA 1 cut(s) 2172
NspI RCATGY 3 cut(s) 427, 1035, 2737
NspV TTCGAA 1 cut(s) 1185
OliI CACNNNNGTG 1 cut(s) 506
PaeI GCATGC 1 cut(s) 2737
PagI TCATGA 2 cut(s) 57, 1720
PceI AGGCCT 2 cut(s) 268, 2710
PciI ACATGT 2 cut(s) 423, 1031
PctI GAATGC 3 cut(s) 1803, 2173, 2347
PdmI GAANNNNTTC 2 cut(s) 53, 1052
PfeI GAWTC 6 cut(s) 475, 520, 607, 1609, 2276, 2876
PflMI CCANNNNNTGG 1 cut(s) 2915
PkrI GCNGC 3 cut(s) 1912, 2013, 2625
PleI GAGTC 3 cut(s) 1253, 1667, 1702
PpsI GAGTC 3 cut(s) 1253, 1667, 1702
PscI ACATGT 2 cut(s) 423, 1031
PshAI GACNNNNGTC 1 cut(s) 2753
PshBI ATTAAT 1 cut(s) 767
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 1098
PspFI CCCAGC 2 cut(s) 20, 240
PspGI CCWGG 1 cut(s) 1098
PspN4I GGNNCC 5 cut(s) 652, 1669, 2436, 2576, 2775
PspOMI GGGCCC 1 cut(s) 2574
PspPI GGNCC 7 cut(s) 650, 794, 1667, 2329, 2574, 2575, 2748
PstI CTGCAG 1 cut(s) 1878
RseI CAYNNNNRTG 4 cut(s) 71, 506, 1030, 2088
SatI GCNGC 3 cut(s) 1911, 2012, 2624
Sau96I GGNCC 7 cut(s) 650, 794, 1667, 2329, 2574, 2575, 2748
ScaI AGTACT 2 cut(s) 911, 1130
SchI GAGTC 3 cut(s) 1254, 1668, 1703
ScrFI CCNGG 1 cut(s) 1100
SduI GDGCHC 1 cut(s) 2578
SfaNI GCATC 1 cut(s) 1652
SfcI CTRYAG 3 cut(s) 1874, 2421, 2482
SfuI TTCGAA 1 cut(s) 1185
SinI GGWCC 4 cut(s) 794, 1667, 2329, 2748
SmiMI CAYNNNNRTG 4 cut(s) 71, 506, 1030, 2088
SmlI CTYRAG 5 cut(s) 413, 676, 739, 1894, 2812
SmoI CTYRAG 5 cut(s) 413, 676, 739, 1894, 2812
SphI GCATGC 1 cut(s) 2737
SseBI AGGCCT 2 cut(s) 268, 2710
SsiI CCGC 4 cut(s) 976, 1430, 2623, 2746
SspMI CTAG 9 cut(s) 158, 528, 636, 663, 1650, 1868, 2240, 2738, 2778
StuI AGGCCT 2 cut(s) 268, 2710
StyD4I CCNGG 1 cut(s) 1098
StyI CCWWGG 2 cut(s) 2239, 2909
TaaI ACNGT 7 cut(s) 439, 1148, 1414, 1466, 2108, 2486, 2823
TaiI ACGT 1 cut(s) 114
TaqI TCGA 4 cut(s) 1185, 1692, 2539, 2854
TatI WGTACW 7 cut(s) 488, 909, 1115, 1128, 1341, 2293, 2320
TauI GCSGC 1 cut(s) 2626
TfiI GAWTC 6 cut(s) 475, 520, 607, 1609, 2276, 2876
TscAI CASTG 8 cut(s) 522, 709, 732, 1471, 2214, 2289, 2508, 2878
TseFI GTSAC 1 cut(s) 704
TseI GCWGC 2 cut(s) 1910, 2011
Tsp45I GTSAC 1 cut(s) 704
TspDTI ATGAA 9 cut(s) 17, 46, 74, 422, 1607, 1780, 2070, 2546, 2886
TspGWI ACGGA 4 cut(s) 1492, 2710, 2743, 2882
TspRI CASTG 8 cut(s) 522, 709, 732, 1471, 2214, 2289, 2508, 2878
Van91I CCANNNNNTGG 1 cut(s) 2915
Vha464I CTTAAG 1 cut(s) 739
VpaK11BI GGWCC 4 cut(s) 794, 1667, 2329, 2748
VspI ATTAAT 1 cut(s) 767
XagI CCTNNNNNAGG 1 cut(s) 1653
XapI RAATTY 5 cut(s) 582, 1106, 1181, 1217, 2599
XceI RCATGY 3 cut(s) 427, 1035, 2737
XmaJI CCTAGG 1 cut(s) 2239
XmiI GTMKAC 6 cut(s) 207, 1409, 1560, 1968, 2142, 2481
XmnI GAANNNNTTC 2 cut(s) 53, 1052
XspI CTAG 9 cut(s) 158, 528, 636, 663, 1650, 1868, 2240, 2738, 2778
ZrmI AGTACT 2 cut(s) 911, 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.