Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000128.1

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

94489 .. 100074

Gene Structure 5586 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000128.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

atgatttctatccgcctagctaaattggtggaagctctgaaagaaatagctacacaaataggaaagaaatattggaactttagcgtcgacccttgcagcaatgacacgagctgggccaccccaatatctgctgccaggcctctgttcaacaacactgtcacctgcaactgctccttctctgatggtgcatgccacgtcaccaacatctttcttaaagggcaagaccttgctggtgtgcttccaccgtctattgcaaagttaccctacctgataaatgtcgatttcacaaggaactacctaaatggcagcataccgcgagaatgggcatcgacgaagttgcaatatctgtccattactgtgaacaacttatctggaccaatcccaagctacctgggaaacattaccactctgacttatctgagcatagagaataacatgttctcaggaactgttcctcctgagcttggaaacttggttaacttgcagaatcttattcttagtgcaaacaatctcacaggagaattgccggcggctcttatgaatctgactaagttaacagaactgaggattagcagcaacaacttcactggaagaatgcccgacttttttcgaagttggaatcaacttcagaaattagagatccaagctagtggcctacaaggccccattccatctagcatttctgtcttgagtaatttaacagaactaaggatcagcgacttaaatggagggggttcagtatttccaaacttgagcaatatgataagcttgcaaagattaatgctcaggagctgtaacttatctggacctattccttctgatttatcagcaatgtcacagttgaaaacattagatctgagcttcaacagattggaggggagcattcctgatttggcagatctgacacccttgcagaacttgtatctgacaagcaacttgcttactggatctattccagactggatcaagagcagagataatcgctacgagatagatgtttcttacaataatttttcggagagctctgagtcaccttcttgtacagaaaacctgaacgtgttcaaaagcttttctgcacatgataactcattatatgcggagtgcctgaagagctctccatgtccaaaagatcagtactcattgcatatcaattgtggtggtaaagcaaccaccattggaggaatcaactttgaagcggatcaagacccaggaggtgcagcacattttgttccttctgggcctagctggggattcagtagcactggacatttctgggatatcagtactcattgcatatcaattgtggtggtaaagcaaccaccattggaggaatcaactttgaagcggatcaagacccaggaggtgcagcacattttgttccttcagggcctagctggggattcagtagcactggacatttctgggatgttaacaccacctctaaatatctctggttcgctctttctcaattcttgtcattgtttgtcactgatttgggaaattttggggattttgttgagttttataaatttgaagctttacttttcggagattataatcagaggcaatagatctttttctagtcttggaagacggatattcgatgtttatattcaggagaagttagtgttgaacgatttcgacattgaaaaggatgcccaaggggttgataagccagtcatctgggaatttaaagcagttgaggttaagaagaaaactttagagatccgatttcattggtctgggaaagggacaacagcttccccaaacagaggagtatatggtccccttatttcagctctctctatagaatcagagttcaagcctcctcatgatagcaagacatgggtatttattgtggtgggagcttcggttttgtgcctcattctgttgattttaagcattttttggtggagaggctgtctggataagaagacatcaagagaagaagctctgagaggactggatctgcaaactggctttttcaccttcaagcaaataaaagctgccactaataactttgatcctgtaaacaaaattggggaaggtggttttggatctgtgtacaaggtaccataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

692

Amino Acids

76.28

Weight (kDa)

6.4

Isoelectric Point (pI)

38.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1526, 1556
AarI	CACCTGC	1 cut(s)	170
Acc36I	ACCTGC	1 cut(s)	170
Acc65I	GGTACC	1 cut(s)	2071
AccB1I	GGYRCC	1 cut(s)	2071
AccI	GTMKAC	1 cut(s)	87
AccII	CGCG	1 cut(s)	316
AciI	CCGC	6 cut(s)	13, 314, 530, 1097, 1196, 1345
AcsI	RAATTY	3 cut(s)	1500, 1528, 1688
AcuI	CTGAAG	3 cut(s)	611, 1127, 1367
AfaI	GTAC	5 cut(s)	1042, 1136, 1285, 2066, 2073
AfiI	CCNNNNNNNGG	4 cut(s)	464, 1247, 1396, 1772
AflIII	ACRYGT	2 cut(s)	435, 1056
AjiI	CACGTC	1 cut(s)	196
AjnI	CCWGG	4 cut(s)	134, 390, 1207, 1356
AjuI	GAANNNNNNNTTGG	4 cut(s)	55, 87, 2037, 2069
AloI	GAACNNNNNNTCC	2 cut(s)	439, 471
Alw21I	GWGCWC	2 cut(s)	1025, 1115
AlwNI	CAGNNNCTG	2 cut(s)	449, 792
AoxI	GGCC	6 cut(s)	114, 137, 652, 661, 1238, 1387
ApeKI	GCWGC	7 cut(s)	96, 131, 306, 573, 1217, 1366, 2006
ApoI	RAATTY	3 cut(s)	1500, 1528, 1688
AseI	ATTAAT	1 cut(s)	779
Asp700I	GAANNNNTTC	2 cut(s)	1058, 1637
Asp718I	GGTACC	1 cut(s)	2071
AspS9I	GGNCC	7 cut(s)	114, 374, 662, 806, 1238, 1387, 1784
AsuHPI	GGTGA	4 cut(s)	151, 190, 1023, 1978
AsuII	TTCGAA	1 cut(s)	610
AvaII	GGWCC	3 cut(s)	374, 806, 1784
BanI	GGYRCC	1 cut(s)	2071
BanII	GRGCYC	2 cut(s)	1025, 1115
BauI	CACGAG	1 cut(s)	106
BbsI	GAAGAC	2 cut(s)	1597, 1940
Bbv12I	GWGCWC	2 cut(s)	1025, 1115
BbvI	GCAGC	7 cut(s)	108, 118, 318, 585, 1229, 1378, 1993
BccI	CCATC	2 cut(s)	176, 679
BcgI	CGANNNNNNTGC	2 cut(s)	319, 353
BciT130I	CCWGG	4 cut(s)	136, 392, 1209, 1358
BfaI	CTAG	6 cut(s)	17, 648, 675, 1242, 1391, 1581
BfmI	CTRYAG	1 cut(s)	1806
BfuAI	ACCTGC	1 cut(s)	170
BglI	GCCNNNNNGGC	1 cut(s)	660
BglII	AGATCT	3 cut(s)	853, 898, 1571
BisI	GCNGC	8 cut(s)	97, 132, 307, 531, 574, 1218, 1367, 2007
BlsI	GCNGC	8 cut(s)	98, 133, 308, 532, 575, 1219, 1368, 2008
BmcAI	AGTACT	2 cut(s)	1136, 1285
Bme1390I	CCNGG	4 cut(s)	136, 392, 1209, 1358
Bme18I	GGWCC	3 cut(s)	374, 806, 1784
BmgBI	CACGTC	1 cut(s)	196
BmgT120I	GGNCC	7 cut(s)	114, 374, 662, 806, 1238, 1387, 1784
BmiI	GGNNCC	3 cut(s)	664, 1786, 2073
BmrFI	CCNGG	4 cut(s)	136, 392, 1209, 1358
BmsI	GCATC	2 cut(s)	335, 1645
BpiI	GAAGAC	2 cut(s)	1597, 1940
Bpu10I	CCTNAGC	2 cut(s)	459, 785
Bpu14I	TTCGAA	1 cut(s)	610
BpuEI	CTTGAG	2 cut(s)	709, 772
BsaBI	GATNNNNATC	2 cut(s)	8, 1556
BsaJI	CCNNGG	4 cut(s)	391, 1207, 1356, 1660
BsaXI	ACNNNNNCTCC	6 cut(s)	439, 469, 1857, 1887, 1906, 1936
Bsc4I	CCNNNNNNNGG	4 cut(s)	464, 1247, 1396, 1772
Bse118I	RCCGGY	1 cut(s)	526
Bse1I	ACTGG	8 cut(s)	592, 949, 965, 1267, 1416, 1676, 1968, 1981
Bse3DI	GCAATG	4 cut(s)	106, 837, 1139, 1288
Bse8I	GATNNNNATC	2 cut(s)	8, 1556
BseBI	CCWGG	4 cut(s)	136, 392, 1209, 1358
BseDI	CCNNGG	4 cut(s)	391, 1207, 1356, 1660
BseGI	GGATG	2 cut(s)	1431, 1660
BseJI	GATNNNNATC	2 cut(s)	8, 1556
BseLI	CCNNNNNNNGG	4 cut(s)	464, 1247, 1396, 1772
BseMI	GCAATG	4 cut(s)	106, 837, 1139, 1288
BseMII	CTCAG	8 cut(s)	410, 450, 456, 554, 799, 848, 1017, 1946
BseNI	ACTGG	8 cut(s)	592, 949, 965, 1267, 1416, 1676, 1968, 1981
BseRI	GAGGAG	2 cut(s)	1788, 1818
BseXI	GCAGC	7 cut(s)	108, 118, 318, 585, 1229, 1378, 1993
BseYI	CCCAGC	3 cut(s)	111, 1245, 1394
BsgI	GTGCAG	3 cut(s)	1059, 1236, 1385
Bsh1236I	CGCG	1 cut(s)	316
BshFI	GGCC	6 cut(s)	116, 139, 654, 663, 1240, 1389
BshNI	GGYRCC	1 cut(s)	2071
BsiHKAI	GWGCWC	2 cut(s)	1025, 1115
BsiSI	CCGG	1 cut(s)	527
BslFI	GGGAC	2 cut(s)	1765, 1770
BslI	CCNNNNNNNGG	4 cut(s)	464, 1247, 1396, 1772
BsmFI	GGGAC	2 cut(s)	1765, 1770
BsmI	GAATGC	2 cut(s)	600, 882
BsnI	GGCC	6 cut(s)	116, 139, 654, 663, 1240, 1389
Bsp119I	TTCGAA	1 cut(s)	610
Bsp1286I	GDGCHC	2 cut(s)	1025, 1115
Bsp1407I	TGTACA	2 cut(s)	1040, 2064
BspACI	CCGC	6 cut(s)	13, 314, 530, 1097, 1196, 1345
BspANI	GGCC	6 cut(s)	116, 139, 654, 663, 1240, 1389
BspCNI	CTCAG	8 cut(s)	411, 451, 455, 555, 798, 849, 1018, 1947
BspFNI	CGCG	1 cut(s)	316
BspHI	TCATGA	1 cut(s)	1831
BspLI	GGNNCC	3 cut(s)	664, 1786, 2073
BspMI	ACCTGC	1 cut(s)	170
BspQI	GCTCTTC	1 cut(s)	1103
BspT104I	TTCGAA	1 cut(s)	610
BspT107I	GGYRCC	1 cut(s)	2071
BsrDI	GCAATG	4 cut(s)	106, 837, 1139, 1288
BsrFI	RCCGGY	1 cut(s)	526
BsrGI	TGTACA	2 cut(s)	1040, 2064
BsrI	ACTGG	8 cut(s)	592, 949, 965, 1267, 1416, 1676, 1968, 1981
BssAI	RCCGGY	1 cut(s)	526
BssECI	CCNNGG	4 cut(s)	391, 1207, 1356, 1660
BssSI	CACGAG	1 cut(s)	106
BssT1I	CCWWGG	1 cut(s)	1660
Bst2BI	CACGAG	1 cut(s)	106
Bst2UI	CCWGG	4 cut(s)	136, 392, 1209, 1358
Bst4CI	ACNGT	5 cut(s)	157, 246, 358, 451, 840
Bst6I	CTCTTC	1 cut(s)	1103
BstAUI	TGTACA	2 cut(s)	1040, 2064
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	3 cut(s)	190, 528, 770
BstF5I	GGATG	2 cut(s)	1431, 1660
BstFNI	CGCG	1 cut(s)	316
BstMWI	GCNNNNNNNGC	2 cut(s)	660, 1110
BstNI	CCWGG	4 cut(s)	136, 392, 1209, 1358
BstNSI	RCATGY	2 cut(s)	192, 439
BstSCI	CCNGG	4 cut(s)	134, 390, 1207, 1356
BstSFI	CTRYAG	1 cut(s)	1806
BstUI	CGCG	1 cut(s)	316
BstV1I	GCAGC	7 cut(s)	108, 118, 318, 585, 1229, 1378, 1993
BstV2I	GAAGAC	2 cut(s)	1597, 1940
BstX2I	RGATCY	8 cut(s)	639, 853, 898, 947, 1571, 1725, 1966, 2057
BstXI	CCANNNNNNTGG	2 cut(s)	650, 1683
BstYI	RGATCY	8 cut(s)	639, 853, 898, 947, 1571, 1725, 1966, 2057
BsuRI	GGCC	6 cut(s)	116, 139, 654, 663, 1240, 1389
BtrI	CACGTC	1 cut(s)	196
BtsCI	GGATG	2 cut(s)	1431, 1660
BtsIMutI	CAGTG	5 cut(s)	153, 585, 1260, 1409, 1487
BveI	ACCTGC	1 cut(s)	170
Cac8I	GCNNGC	3 cut(s)	190, 528, 770
CaiI	CAGNNNCTG	2 cut(s)	449, 792
CciI	TCATGA	1 cut(s)	1831
Cfr10I	RCCGGY	1 cut(s)	526
Cfr13I	GGNCC	7 cut(s)	114, 374, 662, 806, 1238, 1387, 1784
CseI	GACGC	1 cut(s)	73
Csp6I	GTAC	5 cut(s)	1041, 1135, 1284, 2065, 2072
CspCI	CAANNNNNGTGG	4 cut(s)	1138, 1173, 1287, 1322
CviAII	CATG	6 cut(s)	189, 436, 1079, 1119, 1832, 1845
CviQI	GTAC	5 cut(s)	1041, 1135, 1284, 2065, 2072
DraI	TTTAAA	1 cut(s)	1693
Eam1104I	CTCTTC	1 cut(s)	1103
EarI	CTCTTC	1 cut(s)	1103
Ecl136II	GAGCTC	2 cut(s)	1023, 1113
Eco130I	CCWWGG	1 cut(s)	1660
Eco147I	AGGCCT	1 cut(s)	139
Eco24I	GRGCYC	2 cut(s)	1025, 1115
Eco32I	GATATC	1 cut(s)	1279
Eco47I	GGWCC	3 cut(s)	374, 806, 1784
Eco53kI	GAGCTC	2 cut(s)	1023, 1113
Eco57I	CTGAAG	3 cut(s)	611, 1127, 1367
EcoICRI	GAGCTC	2 cut(s)	1023, 1113
EcoO109I	RGGNCCY	2 cut(s)	662, 1387
EcoRII	CCWGG	4 cut(s)	134, 390, 1207, 1356
EcoRV	GATATC	1 cut(s)	1279
EcoT14I	CCWWGG	1 cut(s)	1660
EcoT38I	GRGCYC	2 cut(s)	1025, 1115
ErhI	CCWWGG	1 cut(s)	1660
FaeI	CATG	6 cut(s)	192, 439, 1082, 1122, 1835, 1848
FalI	AAGNNNNNCTT	2 cut(s)	1526, 1558
FaqI	GGGAC	2 cut(s)	1765, 1770
FatI	CATG	6 cut(s)	188, 435, 1078, 1118, 1831, 1844
FblI	GTMKAC	1 cut(s)	87
Fnu4HI	GCNGC	8 cut(s)	97, 132, 307, 531, 574, 1218, 1367, 2007
FokI	GGATG	2 cut(s)	1438, 1667
FriOI	GRGCYC	2 cut(s)	1025, 1115
Fsp4HI	GCNGC	8 cut(s)	97, 132, 307, 531, 574, 1218, 1367, 2007
FspBI	CTAG	6 cut(s)	17, 648, 675, 1242, 1391, 1581
GluI	GCNGC	8 cut(s)	97, 132, 307, 531, 574, 1218, 1367, 2007
GsaI	CCCAGC	3 cut(s)	115, 1249, 1398
HaeIII	GGCC	6 cut(s)	116, 139, 654, 663, 1240, 1389
HapII	CCGG	1 cut(s)	527
HgaI	GACGC	1 cut(s)	73
Hin1II	CATG	6 cut(s)	192, 439, 1082, 1122, 1835, 1848
HincII	GTYRAC	4 cut(s)	88, 478, 555, 1431
HindII	GTYRAC	4 cut(s)	88, 478, 555, 1431
HindIII	AAGCTT	3 cut(s)	766, 1066, 1535
HinfI	GANTC	9 cut(s)	487, 541, 619, 1028, 1182, 1251, 1331, 1400, 1811
HpaI	GTTAAC	3 cut(s)	478, 555, 1431
HpaII	CCGG	1 cut(s)	527
HphI	GGTGA	4 cut(s)	151, 190, 1023, 1978
Hpy166II	GTNNAC	7 cut(s)	88, 361, 478, 555, 1431, 2032, 2065
Hpy8I	GTNNAC	7 cut(s)	88, 361, 478, 555, 1431, 2032, 2065
Hpy99I	CGWCG	2 cut(s)	89, 334
HpyAV	CCTTC	7 cut(s)	184, 825, 1044, 1242, 1391, 1999, 2039
HpyCH4III	ACNGT	5 cut(s)	157, 246, 358, 451, 840
HpyCH4IV	ACGT	2 cut(s)	195, 1056
HpyF10VI	GCNNNNNNNGC	2 cut(s)	660, 1110
HpySE526I	ACGT	2 cut(s)	195, 1056
Hsp92II	CATG	6 cut(s)	192, 439, 1082, 1122, 1835, 1848
KpnI	GGTACC	1 cut(s)	2075
KroI	GCCGGC	1 cut(s)	526
KroNI	GCCGGC	1 cut(s)	528
KspAI	GTTAAC	3 cut(s)	478, 555, 1431
LguI	GCTCTTC	1 cut(s)	1103
LmnI	GCTCC	4 cut(s)	176, 789, 879, 1865
Lsp1109I	GCAGC	7 cut(s)	108, 118, 318, 585, 1229, 1378, 1993
LweI	GCATC	2 cut(s)	335, 1645
MaeI	CTAG	6 cut(s)	17, 648, 675, 1242, 1391, 1581
MaeII	ACGT	2 cut(s)	195, 1056
MaeIII	GTNAC	7 cut(s)	157, 196, 258, 794, 834, 1029, 1485
MboII	GAAGA	6 cut(s)	603, 1120, 1602, 1723, 1945, 1958
MfeI	CAATTG	2 cut(s)	1150, 1299
MflI	RGATCY	8 cut(s)	639, 853, 898, 947, 1571, 1725, 1966, 2057
MhlI	GDGCHC	2 cut(s)	1025, 1115
MlyI	GAGTC	1 cut(s)	1037
MmeI	TCCRAC	1 cut(s)	596
MroNI	GCCGGC	1 cut(s)	526
MroXI	GAANNNNTTC	2 cut(s)	1058, 1637
MslI	CAYNNNNRTG	1 cut(s)	356
MspI	CCGG	1 cut(s)	527
MspR9I	CCNGG	4 cut(s)	136, 392, 1209, 1358
MunI	CAATTG	2 cut(s)	1150, 1299
Mva1269I	GAATGC	2 cut(s)	600, 882
MvaI	CCWGG	4 cut(s)	136, 392, 1209, 1358
MvnI	CGCG	1 cut(s)	316
MwoI	GCNNNNNNNGC	2 cut(s)	660, 1110
NaeI	GCCGGC	1 cut(s)	528
NgoMIV	GCCGGC	1 cut(s)	526
NlaIII	CATG	6 cut(s)	192, 439, 1082, 1122, 1835, 1848
NlaIV	GGNNCC	3 cut(s)	664, 1786, 2073
NmuCI	GTSAC	5 cut(s)	157, 196, 834, 1029, 1485
NspI	RCATGY	2 cut(s)	192, 439
NspV	TTCGAA	1 cut(s)	610
PaeI	GCATGC	1 cut(s)	192
PagI	TCATGA	1 cut(s)	1831
PaqCI	CACCTGC	1 cut(s)	170
PceI	AGGCCT	1 cut(s)	139
PciI	ACATGT	1 cut(s)	435
PciSI	GCTCTTC	1 cut(s)	1103
PctI	GAATGC	2 cut(s)	600, 882
PdiI	GCCGGC	1 cut(s)	528
PdmI	GAANNNNTTC	2 cut(s)	1058, 1637
PfeI	GAWTC	8 cut(s)	487, 541, 619, 1182, 1251, 1331, 1400, 1811
PkrI	GCNGC	8 cut(s)	98, 133, 308, 532, 575, 1219, 1368, 2008
PleI	GAGTC	1 cut(s)	1036
PpsI	GAGTC	1 cut(s)	1036
PscI	ACATGT	1 cut(s)	435
PshBI	ATTAAT	1 cut(s)	779
PsiI	TTATAA	2 cut(s)	1526, 1556
Psp124BI	GAGCTC	2 cut(s)	1025, 1115
Psp6I	CCWGG	4 cut(s)	134, 390, 1207, 1356
PspFI	CCCAGC	3 cut(s)	111, 1245, 1394
PspGI	CCWGG	4 cut(s)	134, 390, 1207, 1356
PspN4I	GGNNCC	3 cut(s)	664, 1786, 2073
PspPI	GGNCC	7 cut(s)	114, 374, 662, 806, 1238, 1387, 1784
PstNI	CAGNNNCTG	2 cut(s)	449, 792
PsuI	RGATCY	8 cut(s)	639, 853, 898, 947, 1571, 1725, 1966, 2057
RsaI	GTAC	5 cut(s)	1042, 1136, 1285, 2066, 2073
RsaNI	GTAC	5 cut(s)	1041, 1135, 1284, 2065, 2072
RseI	CAYNNNNRTG	1 cut(s)	356
SacI	GAGCTC	2 cut(s)	1025, 1115
SalI	GTCGAC	1 cut(s)	86
SapI	GCTCTTC	1 cut(s)	1103
SatI	GCNGC	8 cut(s)	97, 132, 307, 531, 574, 1218, 1367, 2007
Sau96I	GGNCC	7 cut(s)	114, 374, 662, 806, 1238, 1387, 1784
ScaI	AGTACT	2 cut(s)	1136, 1285
SchI	GAGTC	1 cut(s)	1037
ScrFI	CCNGG	4 cut(s)	136, 392, 1209, 1358
SduI	GDGCHC	2 cut(s)	1025, 1115
SfaNI	GCATC	2 cut(s)	335, 1645
SfcI	CTRYAG	1 cut(s)	1806
SfiI	GGCCNNNNNGGCC	1 cut(s)	660
SfuI	TTCGAA	1 cut(s)	610
SinI	GGWCC	3 cut(s)	374, 806, 1784
SmiMI	CAYNNNNRTG	1 cut(s)	356
SmlI	CTYRAG	2 cut(s)	688, 751
SmoI	CTYRAG	2 cut(s)	688, 751
SphI	GCATGC	1 cut(s)	192
SseBI	AGGCCT	1 cut(s)	139
SsiI	CCGC	6 cut(s)	13, 314, 530, 1097, 1196, 1345
SspI	AATATT	1 cut(s)	71
SspMI	CTAG	6 cut(s)	17, 648, 675, 1242, 1391, 1581
SstI	GAGCTC	2 cut(s)	1025, 1115
StuI	AGGCCT	1 cut(s)	139
StyD4I	CCNGG	4 cut(s)	134, 390, 1207, 1356
StyI	CCWWGG	1 cut(s)	1660
TaaI	ACNGT	5 cut(s)	157, 246, 358, 451, 840
TaiI	ACGT	2 cut(s)	198, 1059
TaqI	TCGA	6 cut(s)	87, 279, 329, 610, 1602, 1641
TatI	WGTACW	4 cut(s)	1040, 1134, 1283, 2064
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	8 cut(s)	487, 541, 619, 1182, 1251, 1331, 1400, 1811
TscAI	CASTG	5 cut(s)	160, 592, 1267, 1416, 1494
TseFI	GTSAC	5 cut(s)	157, 196, 834, 1029, 1485
TseI	GCWGC	7 cut(s)	96, 131, 306, 573, 1217, 1366, 2006
Tsp45I	GTSAC	5 cut(s)	157, 196, 834, 1029, 1485
TspDTI	ATGAA	2 cut(s)	554, 1724
TspGWI	ACGGA	1 cut(s)	1609
TspRI	CASTG	5 cut(s)	160, 592, 1267, 1416, 1494
VpaK11BI	GGWCC	3 cut(s)	374, 806, 1784
VspI	ATTAAT	1 cut(s)	779
XapI	RAATTY	3 cut(s)	1500, 1528, 1688
XceI	RCATGY	2 cut(s)	192, 439
XmiI	GTMKAC	1 cut(s)	87
XmnI	GAANNNNTTC	2 cut(s)	1058, 1637
XspI	CTAG	6 cut(s)	17, 648, 675, 1242, 1391, 1581
ZrmI	AGTACT	2 cut(s)	1136, 1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.