MD10G1272300.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
36396927 .. 36399982
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1272300.v1.1.491

Sequence Viewer

Length: 1791 bp
ATGTTCTTGCATATAAATTGCGGTGGAAAACAATTGACTGTCGGAAACATCAAGTATGATGGCGATGAAGCTTCAGGAGGCGGAGCAAAGTTTGTTCATGACACAGAGAATTGGGGATTTAGTAGCACTGGGGATTTTGGACTTATAAATTATGACCAAGACTATATAGCAAAAAATATCTCTGTACTCAAAATGAACAACTCGGAATTGTACAGAACTGCCCGAATTTCTCCTCTTTCTCTCACATATTATGCCCGTTGCTTAGCAAACGGAAATTACACTGTGAAACTACACTTTGCAGAAATAGTTATGAGAAACAACAGGTCTTATTACAGTGTTGGACGACGAATTTTTGATGTCTATATCCAGGAAAAACTGGTATTGAAGGATTTCGATATAGAAAAGGAAGCACAAGGGGTTGATAAGGAAGTGATTAAGGTATTTAATGCAGTTGTCAATGTTGCGACTTTAGAGATCCGCTTTTATTGGGCCGGGAAAGGAACAAGTAATGCTCCGGAAAGGGGAATATATGGTTCTCTTATATCTGCTATCTCAGTGGAGTCCGATTTCAAACCTCCTGCTGATAGCAAAACGAAGATATACATTGTGGTTGTAGTTGTTTCAGCGTTGTGCCTTTTTTTTGTGACTGCTGCCATTCTTTGGTTACGATGCTGTAAGGAACGCAGGACATCTACTAGGGAACAAGATCTGAAAGGATTAGATCTGCAAACTGGTTTCTTTGGGTTCAAACAAATCAAAGCTGCCACTAACAACTTCGATGCTGCGAACAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGCGAATTATCAGATGGTACTATTATTGCAGTTAAGCAACTTTCTTCAAAATCAAAGCAAGGAAATCGAGAATTTGTGAATGAAGTAGGCATGATTTCTGCTTTACGACACCCAAATCTTGTTAGATTGTATGGATGTTGCATTGAGAGAAATGAGTTATTGTTGGTATATGAATATATGGAGAACAACAGCCTCGCACATAGTTTATTTGGTCCAGAGGAAAGCCTAAAGAAATTGGACTGGAATACAAGGCAGAAAATATGTGTTGGCATTGCAAAAGGTTTGGCTTTCATGCATGAGGAGTCAACCCTGAAAATTGTTCATAGGGACATCAAAACTACCAATATACTGCTTGACAAGGACTTGAACCCTAAAATCTCCGACTTTGGTCTGGCCAAGCTGGACGAAGAGGAGAAGACGCATATTAGCACCCGAGTAGCTGGAACTATAGGATACATGGCGCCCGAATATGCATTATGGGGACATTTAACTGATAAAGTCGATGTTTACAGTTTTGGGGTGGTTGCACTAGAGCTCATATCTGGCAAAAACAACATCAAATTTCGGCCCTATGAGAATTATGTATGCCTTCTAGATTGGGCTTTTGTTTTACAACAGACTGGAAATCTGATGGAGCTGATCGATCCAAAGTTGGGCTCCGACTTTAACAAGGAACAGGCAATGAGAATGATTAAGGTCGCTATACTATGCACCAACCCAGCACCGGCATTAAGACCTACAATGTCTGCAGTAGTGAGCATGCTTGAAGGTCGAGCTATAGTTCATGAACTGAACATAAATCCAAGTATTTACGGTGATGAAATGAGGTTTGAGTCCCTTAGAGACGAGTCTAACAGTCGGAGTGCATGCGAGACAGAAAGCTTAATTTATTTATCTGATCCAATAGCAATTCCCTCTTCCCACTCGTCTGTCCAAGATTTGTATCCGGTAAATTTTGATTCTTGA

Protein Analysis

597

Amino Acids

66.72

Weight (kDa)

6.19

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 3 - 184 4.6e-39 Malectin domain
Pkinase PF00069 261 - 527 3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 262 - 530 2.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
AccB1I GGYRCC 1 cut(s) 1285
AccB7I CCANNNNNTGG 1 cut(s) 660
AccIII TCCGGA 1 cut(s) 514
AciI CCGC 3 cut(s) 21, 81, 478
AclWI GGATC 3 cut(s) 469, 1463, 1718
AcoI YGGCCR 1 cut(s) 1218
AcsI RAATTY 5 cut(s) 225, 348, 896, 1385, 1777
AcuI CTGAAG 1 cut(s) 57
AcyI GRCGYC 1 cut(s) 1286
AfaI GTAC 3 cut(s) 186, 212, 844
AfiI CCNNNNNNNGG 4 cut(s) 521, 660, 1478, 1549
AgsI TTSAA 6 cut(s) 385, 571, 748, 873, 1192, 1592
AjnI CCWGG 1 cut(s) 366
AjuI GAANNNNNNNTTGG 2 cut(s) 792, 824
Alw21I GWGCWC 1 cut(s) 1362
Alw26I GTCTC 2 cut(s) 1662, 1691
AlwI GGATC 3 cut(s) 469, 1463, 1718
Ama87I CYCGRG 1 cut(s) 1257
Aor13HI TCCGGA 1 cut(s) 514
AoxI GGCC 3 cut(s) 489, 1218, 1391
ApeKI GCWGC 3 cut(s) 650, 761, 782
ApoI RAATTY 5 cut(s) 225, 348, 896, 1385, 1777
Asp700I GAANNNNTTC 1 cut(s) 389
AspLEI GCGC 1 cut(s) 1288
AspS9I GGNCC 3 cut(s) 489, 1037, 1392
AsuC2I CCSGG 1 cut(s) 493
AsuHPI GGTGA 1 cut(s) 1652
AvaI CYCGRG 1 cut(s) 1257
AvaII GGWCC 1 cut(s) 1037
BalI TGGCCA 1 cut(s) 1220
BanI GGYRCC 1 cut(s) 1285
BanII GRGCYC 2 cut(s) 1362, 1484
BbsI GAAGAC 1 cut(s) 1247
Bbv12I GWGCWC 1 cut(s) 1362
BbvI GCAGC 3 cut(s) 637, 748, 769
BccI CCATC 3 cut(s) 53, 833, 1450
BcgI CGANNNNNNTGC 2 cut(s) 872, 906
BciT130I CCWGG 1 cut(s) 368
BciVI GTATCC 2 cut(s) 1271, 1779
BcnI CCSGG 1 cut(s) 493
BcoDI GTCTC 2 cut(s) 1662, 1691
BfaI CTAG 3 cut(s) 696, 1355, 1418
BfmI CTRYAG 3 cut(s) 1272, 1572, 1602
BfoI RGCGCY 1 cut(s) 1289
BfuI GTATCC 2 cut(s) 1271, 1779
BglII AGATCT 2 cut(s) 706, 721
BisI GCNGC 3 cut(s) 651, 762, 783
BlpI GCTNAGC 1 cut(s) 262
BlsI GCNGC 3 cut(s) 652, 763, 784
Bme1390I CCNGG 2 cut(s) 368, 493
Bme18I GGWCC 1 cut(s) 1037
BmeT110I CYCGRG 1 cut(s) 1257
BmgT120I GGNCC 3 cut(s) 489, 1037, 1392
BmiI GGNNCC 2 cut(s) 1287, 1483
BmrFI CCNGG 2 cut(s) 368, 493
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 2 cut(s) 659, 769
BmuI ACTGGG 1 cut(s) 138
BoxI GACNNNNGTC 1 cut(s) 1212
BpiI GAAGAC 1 cut(s) 1247
Bpu1102I GCTNAGC 1 cut(s) 262
BpuMI CCSGG 1 cut(s) 493
Bsa29I ATCGAT 1 cut(s) 1467
BsaBI GATNNNNATC 1 cut(s) 1767
BsaHI GRCGYC 1 cut(s) 1286
BsaWI WCCGGW 2 cut(s) 514, 1771
Bsc4I CCNNNNNNNGG 4 cut(s) 521, 660, 1478, 1549
Bse118I RCCGGY 1 cut(s) 1549
Bse1I ACTGG 5 cut(s) 133, 381, 736, 1070, 1450
Bse3DI GCAATG 2 cut(s) 1095, 1512
Bse8I GATNNNNATC 1 cut(s) 1767
BseAI TCCGGA 1 cut(s) 514
BseBI CCWGG 1 cut(s) 368
BseCI ATCGAT 1 cut(s) 1467
BseGI GGATG 1 cut(s) 965
BseJI GATNNNNATC 1 cut(s) 1767
BseLI CCNNNNNNNGG 4 cut(s) 521, 660, 1478, 1549
BseMI GCAATG 2 cut(s) 1095, 1512
BseMII CTCAG 1 cut(s) 567
BseNI ACTGG 5 cut(s) 133, 381, 736, 1070, 1450
BseRI GAGGAG 3 cut(s) 222, 1139, 1250
BseXI GCAGC 3 cut(s) 637, 748, 769
BseYI CCCAGC 1 cut(s) 1543
BshFI GGCC 3 cut(s) 491, 1220, 1393
BshNI GGYRCC 1 cut(s) 1285
BshVI ATCGAT 1 cut(s) 1467
BsiHKAI GWGCWC 1 cut(s) 1362
BsiHKCI CYCGRG 1 cut(s) 1257
BsiSI CCGG 4 cut(s) 492, 515, 1550, 1772
BslFI GGGAC 3 cut(s) 1166, 1320, 1645
BslI CCNNNNNNNGG 4 cut(s) 521, 660, 1478, 1549
BsmAI GTCTC 2 cut(s) 1662, 1691
BsmBI CGTCTC 1 cut(s) 1662
BsmFI GGGAC 3 cut(s) 1166, 1320, 1645
BsnI GGCC 3 cut(s) 491, 1220, 1393
BsoBI CYCGRG 1 cut(s) 1257
Bsp1286I GDGCHC 2 cut(s) 1362, 1484
Bsp13I TCCGGA 1 cut(s) 514
Bsp1407I TGTACA 1 cut(s) 210
Bsp143I GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
Bsp1720I GCTNAGC 1 cut(s) 262
BspACI CCGC 3 cut(s) 21, 81, 478
BspANI GGCC 3 cut(s) 491, 1220, 1393
BspCNI CTCAG 1 cut(s) 566
BspDI ATCGAT 1 cut(s) 1467
BspEI TCCGGA 1 cut(s) 514
BspHI TCATGA 2 cut(s) 97, 1609
BspLI GGNNCC 2 cut(s) 1287, 1483
BspMAI CTGCAG 1 cut(s) 1576
BspPI GGATC 3 cut(s) 469, 1463, 1718
BspT107I GGYRCC 1 cut(s) 1285
BsrDI GCAATG 2 cut(s) 1095, 1512
BsrFI RCCGGY 1 cut(s) 1549
BsrGI TGTACA 1 cut(s) 210
BsrI ACTGG 5 cut(s) 133, 381, 736, 1070, 1450
BssAI RCCGGY 1 cut(s) 1549
BssMI GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
BssNI GRCGYC 1 cut(s) 1286
Bst2UI CCWGG 1 cut(s) 368
Bst4CI ACNGT 6 cut(s) 40, 283, 335, 1337, 1640, 1682
Bst6I CTCTTC 2 cut(s) 1227, 1747
BstACI GRCGYC 1 cut(s) 1286
BstAUI TGTACA 1 cut(s) 210
BstC8I GCNNGC 2 cut(s) 1586, 1693
BstDEI CTNAG 3 cut(s) 262, 553, 1664
BstF5I GGATG 1 cut(s) 965
BstH2I RGCGCY 1 cut(s) 1289
BstHHI GCGC 1 cut(s) 1288
BstKTI GATC 6 cut(s) 477, 709, 724, 1467, 1471, 1726
BstMAI GTCTC 2 cut(s) 1662, 1691
BstMBI GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
BstNI CCWGG 1 cut(s) 368
BstNSI RCATGY 2 cut(s) 1588, 1695
BstPAI GACNNNNGTC 1 cut(s) 1212
BstSCI CCNGG 2 cut(s) 366, 491
BstSFI CTRYAG 3 cut(s) 1272, 1572, 1602
BstV1I GCAGC 3 cut(s) 637, 748, 769
BstV2I GAAGAC 1 cut(s) 1247
BstX2I RGATCY 3 cut(s) 474, 706, 721
BstYI RGATCY 3 cut(s) 474, 706, 721
Bsu15I ATCGAT 1 cut(s) 1467
BsuI GTATCC 2 cut(s) 1271, 1779
BsuRI GGCC 3 cut(s) 491, 1220, 1393
BsuTUI ATCGAT 1 cut(s) 1467
BtgZI GCGATG 1 cut(s) 78
BtsCI GGATG 1 cut(s) 965
BtsIMutI CAGTG 4 cut(s) 126, 279, 340, 561
Cac8I GCNNGC 2 cut(s) 1586, 1693
CciI TCATGA 2 cut(s) 97, 1609
CfoI GCGC 1 cut(s) 1288
Cfr10I RCCGGY 1 cut(s) 1549
Cfr13I GGNCC 3 cut(s) 489, 1037, 1392
ClaI ATCGAT 1 cut(s) 1467
CseI GACGC 1 cut(s) 1252
Csp6I GTAC 3 cut(s) 185, 211, 843
CviAII CATG 8 cut(s) 98, 916, 1117, 1121, 1282, 1585, 1610, 1692
CviQI GTAC 3 cut(s) 185, 211, 843
DdeI CTNAG 3 cut(s) 262, 553, 1664
DinI GGCGCC 1 cut(s) 1287
DpnI GATC 6 cut(s) 476, 708, 723, 1466, 1470, 1725
DpnII GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
EaeI YGGCCR 1 cut(s) 1218
Eam1104I CTCTTC 2 cut(s) 1227, 1747
EarI CTCTTC 2 cut(s) 1227, 1747
EciI GGCGGA 1 cut(s) 96
Ecl136II GAGCTC 1 cut(s) 1360
Eco24I GRGCYC 2 cut(s) 1362, 1484
Eco47I GGWCC 1 cut(s) 1037
Eco53kI GAGCTC 1 cut(s) 1360
Eco57I CTGAAG 1 cut(s) 57
Eco88I CYCGRG 1 cut(s) 1257
EcoICRI GAGCTC 1 cut(s) 1360
EcoRII CCWGG 1 cut(s) 366
EcoT22I ATGCAT 2 cut(s) 1122, 1300
EcoT38I GRGCYC 2 cut(s) 1362, 1484
EgeI GGCGCC 1 cut(s) 1287
EheI GGCGCC 1 cut(s) 1287
Esp3I CGTCTC 1 cut(s) 1662
FaeI CATG 8 cut(s) 101, 919, 1120, 1124, 1285, 1588, 1613, 1695
FaqI GGGAC 3 cut(s) 1166, 1320, 1645
FatI CATG 8 cut(s) 97, 915, 1116, 1120, 1281, 1584, 1609, 1691
Fnu4HI GCNGC 3 cut(s) 651, 762, 783
FokI GGATG 1 cut(s) 972
FriOI GRGCYC 2 cut(s) 1362, 1484
Fsp4HI GCNGC 3 cut(s) 651, 762, 783
FspBI CTAG 3 cut(s) 696, 1355, 1418
GlaI GCGC 1 cut(s) 1287
GluI GCNGC 3 cut(s) 651, 762, 783
GsaI CCCAGC 1 cut(s) 1547
HaeII RGCGCY 1 cut(s) 1289
HaeIII GGCC 3 cut(s) 491, 1220, 1393
HapII CCGG 4 cut(s) 492, 515, 1550, 1772
HgaI GACGC 1 cut(s) 1252
HhaI GCGC 1 cut(s) 1288
Hin1I GRCGYC 1 cut(s) 1286
Hin1II CATG 8 cut(s) 101, 919, 1120, 1124, 1285, 1588, 1613, 1695
Hin6I GCGC 1 cut(s) 1286
HinP1I GCGC 1 cut(s) 1286
HincII GTYRAC 1 cut(s) 1131
HindII GTYRAC 1 cut(s) 1131
HindIII AAGCTT 3 cut(s) 69, 791, 1705
HinfI GANTC 5 cut(s) 560, 1127, 1658, 1673, 1784
HpaII CCGG 4 cut(s) 492, 515, 1550, 1772
HphI GGTGA 1 cut(s) 1652
Hpy166II GTNNAC 3 cut(s) 820, 1131, 1333
Hpy188III TCNNGA 8 cut(s) 75, 98, 515, 893, 1040, 1418, 1610, 1788
Hpy8I GTNNAC 3 cut(s) 820, 1131, 1333
Hpy99I CGWCG 1 cut(s) 348
HpyAV CCTTC 4 cut(s) 379, 794, 1424, 1586
HpyCH4III ACNGT 6 cut(s) 40, 283, 335, 1337, 1640, 1682
HpyF3I CTNAG 3 cut(s) 262, 553, 1664
Hsp92I GRCGYC 1 cut(s) 1286
Hsp92II CATG 8 cut(s) 101, 919, 1120, 1124, 1285, 1588, 1613, 1695
HspAI GCGC 1 cut(s) 1286
KasI GGCGCC 1 cut(s) 1285
Kpn2I TCCGGA 1 cut(s) 514
Kzo9I GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
LmnI GCTCC 5 cut(s) 83, 517, 812, 1459, 1487
Lsp1109I GCAGC 3 cut(s) 637, 748, 769
LweI GCATC 2 cut(s) 659, 769
MaeI CTAG 3 cut(s) 696, 1355, 1418
MaeIII GTNAC 2 cut(s) 643, 663
MalI GATC 6 cut(s) 476, 708, 723, 1466, 1470, 1725
MboI GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
MboII GAAGA 5 cut(s) 607, 861, 1244, 1252, 1734
MfeI CAATTG 1 cut(s) 32
MflI RGATCY 3 cut(s) 474, 706, 721
MhlI GDGCHC 2 cut(s) 1362, 1484
MlsI TGGCCA 1 cut(s) 1220
MluNI TGGCCA 1 cut(s) 1220
Mly113I GGCGCC 1 cut(s) 1286
MlyI GAGTC 4 cut(s) 569, 1136, 1667, 1682
MmeI TCCRAC 5 cut(s) 22, 319, 1230, 1509, 1664
MnlI CCTC 9 cut(s) 71, 243, 585, 1028, 1036, 1117, 1228, 1644, 1750
Mox20I TGGCCA 1 cut(s) 1220
Mph1103I ATGCAT 2 cut(s) 1122, 1300
MroI TCCGGA 1 cut(s) 514
MroXI GAANNNNTTC 1 cut(s) 389
MscI TGGCCA 1 cut(s) 1220
MseI TTAA 8 cut(s) 435, 444, 858, 1313, 1491, 1518, 1556, 1709
Msp20I TGGCCA 1 cut(s) 1220
MspI CCGG 4 cut(s) 492, 515, 1550, 1772
MspR9I CCNGG 2 cut(s) 368, 493
MunI CAATTG 1 cut(s) 32
MvaI CCWGG 1 cut(s) 368
NarI GGCGCC 1 cut(s) 1286
NciI CCSGG 1 cut(s) 493
NdeII GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
NlaIII CATG 8 cut(s) 101, 919, 1120, 1124, 1285, 1588, 1613, 1695
NlaIV GGNNCC 2 cut(s) 1287, 1483
NmuCI GTSAC 1 cut(s) 643
NsiI ATGCAT 2 cut(s) 1122, 1300
NspI RCATGY 2 cut(s) 1588, 1695
PaeI GCATGC 2 cut(s) 1588, 1695
PagI TCATGA 2 cut(s) 97, 1609
PdmI GAANNNNTTC 1 cut(s) 389
PfeI GAWTC 1 cut(s) 1784
PflMI CCANNNNNTGG 1 cut(s) 660
PfoI TCCNGGA 1 cut(s) 366
PkrI GCNGC 3 cut(s) 652, 763, 784
PleI GAGTC 4 cut(s) 568, 1135, 1666, 1681
PluTI GGCGCC 1 cut(s) 1289
PpsI GAGTC 4 cut(s) 568, 1135, 1666, 1681
PshAI GACNNNNGTC 1 cut(s) 1212
PsiI TTATAA 1 cut(s) 146
Psp124BI GAGCTC 1 cut(s) 1362
Psp6I CCWGG 1 cut(s) 366
PspFI CCCAGC 1 cut(s) 1543
PspGI CCWGG 1 cut(s) 366
PspN4I GGNNCC 2 cut(s) 1287, 1483
PspPI GGNCC 3 cut(s) 489, 1037, 1392
PstI CTGCAG 1 cut(s) 1576
PsuI RGATCY 3 cut(s) 474, 706, 721
RsaI GTAC 3 cut(s) 186, 212, 844
RsaNI GTAC 3 cut(s) 185, 211, 843
SacI GAGCTC 1 cut(s) 1362
SaqAI TTAA 8 cut(s) 435, 444, 858, 1313, 1491, 1518, 1556, 1709
SatI GCNGC 3 cut(s) 651, 762, 783
Sau3AI GATC 6 cut(s) 474, 706, 721, 1464, 1468, 1723
Sau96I GGNCC 3 cut(s) 489, 1037, 1392
SchI GAGTC 4 cut(s) 569, 1136, 1667, 1682
ScrFI CCNGG 2 cut(s) 368, 493
SduI GDGCHC 2 cut(s) 1362, 1484
SfaNI GCATC 2 cut(s) 659, 769
SfcI CTRYAG 3 cut(s) 1272, 1572, 1602
SfoI GGCGCC 1 cut(s) 1287
SinI GGWCC 1 cut(s) 1037
SphI GCATGC 2 cut(s) 1588, 1695
SsiI CCGC 3 cut(s) 21, 81, 478
SspDI GGCGCC 1 cut(s) 1285
SspMI CTAG 3 cut(s) 696, 1355, 1418
SstI GAGCTC 1 cut(s) 1362
StyD4I CCNGG 2 cut(s) 366, 491
TaaI ACNGT 6 cut(s) 40, 283, 335, 1337, 1640, 1682
TaqI TCGA 6 cut(s) 393, 777, 892, 1326, 1467, 1597
TatI WGTACW 2 cut(s) 184, 210
TfiI GAWTC 1 cut(s) 1784
Tru1I TTAA 8 cut(s) 435, 444, 858, 1313, 1491, 1518, 1556, 1709
Tru9I TTAA 8 cut(s) 435, 444, 858, 1313, 1491, 1518, 1556, 1709
TscAI CASTG 4 cut(s) 133, 286, 340, 561
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 3 cut(s) 650, 761, 782
Tsp45I GTSAC 1 cut(s) 643
TspGWI ACGGA 1 cut(s) 285
TspRI CASTG 4 cut(s) 133, 286, 340, 561
Van91I CCANNNNNTGG 1 cut(s) 660
VpaK11BI GGWCC 1 cut(s) 1037
XapI RAATTY 5 cut(s) 225, 348, 896, 1385, 1777
XbaI TCTAGA 1 cut(s) 1417
XceI RCATGY 2 cut(s) 1588, 1695
XmnI GAANNNNTTC 1 cut(s) 389
XspI CTAG 3 cut(s) 696, 1355, 1418
Zsp2I ATGCAT 2 cut(s) 1122, 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.