RchiOBHm_Chr5g0012261

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8212084 .. 8219349
7266 bp
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UTR
Exon/CDS
Intron
PRQ29285

Sequence Viewer

Length: 3180 bp
ATGACCGACGAGCTAGCTCATCAAGAAGGTGGAACAAATATCCGGAAGCAGATTAGTATTGGATGCAAGAAGAAAATGAAGATGGCAATTGGAGCTGGGCTACTTCTTCCTAATAGTCGTCGGAAAACCATCATGAACCTCATCGTGGTGGTGATACTGGTTCTCTGCAATACTGGATTACTCAAAGTTGACGCGCTTACAACTCGTCTTCCTGCTTCTGAAGTTGAAGCCCTAGAAGAAATTGCTAAACAAATAGGAAAAAAAGACTGGGATTTCACAGTAGACCCGTGCCTGAATGACACAACCCACACAAGCTGGGCTACCCCAAAGCCTGCTGACAGGCCTCTCTTCAACAACACCCTCACTTGCAACTGCTCCTTCCCTGATGGCTCGTGTCATGTCATTAACATTATTCTTAGAGGGCAAGATCTTGCTGGTGTTCTTCCAGCATCTATTGCAAAGTTACCCTACCTTACACTAATCGATTTCACGAGGAACTTTCTTAGTGGTAATATACCGAGTGAATGGGCTTCTACAAAGCTGGAATATATGTCCTTTAATGTGAACAACTTAACTGGACCAATCCCTGCTTTCTTGGGAAACATCACCACTCTAAAATACTTGAACCTTGAGACTAACATGTTTTCTGGAACTGTTCCTCCTGAGCTTGGGAAGTTGGTTAACTTGCAGAATCTCATTATTAGTACAAACAATCTCACGGGAGTGTTGCCAGTGAATCTCACTAGACTGAGCAAATTAGCAGAACTGAGAATTAGCAGTAACAACTTCACTGGAAGAATTCCGGATTATTTCCAGAGTTGGAATCAACTTACGCAATTGGAGATCCAAGCTAGTGGTTTACAAGGCCCCATTCCATCTAGCATCTCTATCTTGCGTAATTTAACAGAACTAAGGATCAGTGACTTAAATGGAGGGGGTTCAGTGTTTCCCAACTTAAGTAATATGACAAGCTTGCAAAGATTAATGCTGAGGAGCTGTGATTTATCTGGACCTATTCATGATTTATCAGCAATGACAGTGTTAAATATCTTAGATCTTAGCTTCAACAAATTGGAAGGAAGTATTCCTGATCTTGAAGATCTTACTGAGAACAGATTGCAGTACTTGTATTTGACAAGCAACTTGCTCAATGGCTCTATTCCAGAATGGATTAAGAACAGAGATAACCGCTACCAAATAGATGTTTCTTACAATAATTTTTCGAAGATCTCTGAGCCATCTACATGTAGCGAATACCTGAATGTCTTCAAAAGCTCTGCTGTACCAAACAACACATTATCCGGAGCGTGCCTGGACAAATTTCCATGTACAGAAGTTCAGTACTCATTGCATATAAACTGTGGTGGGAGAGCAACCACCATTGGAGACATCAAATTCGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTGTTCCGACGAGACCTAACTGGGGAGTCAGTAGCTCTGGATTTTTCTGGGATACTGACCTCACCTCTAAAGACTACATAGCAAATAATGTATCAACACTTGGAATGGAAAACTCTCAGTTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACATATTATGCAAACTGCTTAGGAGATGGAAAGTATACTGTGAAACTTCACTTTGCGGAGATAATAATCCGAGCCAATAGATCTTTTTACAGTGTTGGAAGACGGATATTTGATGTCTATATTCAGGAGAAACTTGTATGGAAGGATTTTGACATCGTAAAGGAAGCACAAGGGGTTGATAAGGTATACATTATGAAAACAAATGCAGTTCAAGTTACAAACAAAACTTTAGAGATTCGGTTTCATTGGTCTGGAAAAGGCACGACAGCATCCCCTAGACGAGGAGTCTATGGACCCCTTATATCAGCCATTTCTATAGAGTCTGAGTTCAAGCCTCCTAAAACTCATGACAGCAAAAGAAGGATGTATATTGTGGTTGGAGTTTCAGTTGGAGCTTCAGTTTTGTGCCTCTTCTTCATCATTTTTGGCATTCTTTGGTGGAAAGGCTGTCTGGTGGATAGCCAGACATCACGGGAAGAAGCTCTGAGAGGACTAGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCAACTAATAACTTTGATCCTTTAAATAAAATTGGGGAAGGTGGTTTTGGTTGTGTCTACAAGGGCATATTATTGGATGGCACTACAATTGCAGTTAAGCAACTCTCTTCAAAATCAAAGCAAGGAAATCGTGAGTTCGTGAATGAAATAGGCATGATATCTGGTTTACAACATCCAAATGTGGTTAGGTTATACGGTTGCTGTATTGAAGGAAATCAATTACTATTGGTATACGAATACATGGAAAATAACAGCCTTGCGCATTCTTTGTTTGGGGAAGAGAAAGGCGTCCTAACACTGGACTGGCCTACAAGGCAAAAAGTATGCCTAGGCATAGCAAGAGGTTTGGCTTTTCTACACGAGGAATCAACACTGAAGGTTGTACATAGAGACATCAAAGCTACGAATGTATTACTGGACCAAGACCTGAATGCTAAGATTTCGGACTTTGGTTTAGCCAAGCTTGACGAAGAGGAGAACACACATATTAGCACAAGAATTGCTGGAACTATAGGATATATGGCACCGGAATATGCACTCTGGGGCTGTTTGACCTACAAAGCTGATGTCTACAGTTTTGGTGTTGTTGCACTGGAAATTGTTGCCGGAAAGAACAACATGAAGTTTCGACCAAATGATGATTTTGTATGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATTTGAAGGAGCTGGTGGATCAGCGGCTCGGATCAGATTTCAAGGAGGAACAAGCGATTAGAATGGCTAAAGTAGCTTTGTTATGCACCAATTCAGCACCATCGCTTAGGCCTACCATGTCCGTAGTAGTGAGCATGCTAGAAGGGCGGACCTCCGTCCCTGAGTTGATCATGGATCCTAGCATTTATGGTGATAAAATGAGGATGTCAGCCTTGAGACAACAGTTTGATCAAATTGTAAATGACAGCTCAATTCGATCTCAAACGAGCTACACTGATTCTCAGAGCCACCTTCGTTCATCAGATGTACCATGGACTGGTTCTTCGGGTACTACTACGTCTTCAGATCTCTACAAACTTAATCCTTAG

Protein Analysis

1059

Amino Acids

117.48

Weight (kDa)

6.92

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 198 - 391 4.4e-11 Leucine-rich repeat region
Malectin PF11721 449 - 633 2.7e-36 Malectin domain
Pkinase PF00069 716 - 978 1.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 983 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2385
AccB1I GGYRCC 1 cut(s) 2647
AccB7I CCANNNNNTGG 1 cut(s) 3128
AccI GTMKAC 6 cut(s) 282, 1622, 1773, 2181, 2355, 2694
AccII CGCG 1 cut(s) 194
AccIII TCCGGA 3 cut(s) 42, 802, 1301
AciI CCGC 4 cut(s) 1189, 1643, 2836, 2959
AclWI GGATC 7 cut(s) 838, 923, 2135, 2838, 2851, 2981, 2994
AcsI RAATTY 5 cut(s) 798, 1319, 1394, 1430, 2812
AcuI CTGAAG 4 cut(s) 240, 1968, 2519, 3138
AcyI GRCGYC 1 cut(s) 2412
AfaI GTAC 9 cut(s) 706, 1124, 1284, 1330, 1343, 1556, 2508, 3120, 3142
AfiI CCNNNNNNNGG 6 cut(s) 145, 668, 1454, 1868, 2422, 3128
AflII CTTAAG 1 cut(s) 955
AflIII ACRYGT 2 cut(s) 639, 1244
AhdI GACNNNNNGTC 1 cut(s) 1871
AjnI CCWGG 1 cut(s) 1311
AjuI GAANNNNNNNTTGG 2 cut(s) 2154, 2186
AleI CACNNNNGTG 1 cut(s) 722
AloI GAACNNNNNNTCC 2 cut(s) 643, 675
Alw26I GTCTC 5 cut(s) 626, 1380, 1438, 2508, 3022
AlwI GGATC 7 cut(s) 838, 923, 2135, 2838, 2851, 2981, 2994
Aor13HI TCCGGA 3 cut(s) 42, 802, 1301
AoxI GGCC 5 cut(s) 341, 865, 2429, 2787, 2921
ApaI GGGCCC 1 cut(s) 2791
ApeKI GCWGC 1 cut(s) 2123
ApoI RAATTY 5 cut(s) 798, 1319, 1394, 1430, 2812
ArsI GACNNNNNNTTYG 6 cut(s) 1379, 1411, 2676, 2708, 3118, 3150
AseI ATTAAT 1 cut(s) 983
Asp700I GAANNNNTTC 1 cut(s) 1265
AspA2I CCTAGG 1 cut(s) 2452
AspLEI GCGC 2 cut(s) 196, 2386
AspS9I GGNCC 8 cut(s) 578, 866, 1010, 1880, 2542, 2787, 2788, 2961
AsuHPI GGTGA 5 cut(s) 163, 598, 1486, 2095, 3014
AsuII TTCGAA 2 cut(s) 1223, 1398
AsuNHI GCTAGC 1 cut(s) 13
AvaII GGWCC 5 cut(s) 578, 1010, 1880, 2542, 2961
AvrII CCTAGG 1 cut(s) 2452
BaeGI GKGCMC 1 cut(s) 2791
BamHI GGATCC 1 cut(s) 2986
BanI GGYRCC 1 cut(s) 2647
BanII GRGCYC 1 cut(s) 2791
BauI CACGAG 3 cut(s) 391, 490, 2483
BbsI GAAGAC 4 cut(s) 200, 1258, 1693, 3144
BbvCI CCTCAGC 1 cut(s) 989
BbvI GCAGC 1 cut(s) 2110
BccI CCATC 8 cut(s) 76, 137, 380, 883, 1246, 1607, 2195, 2920
BcgI CGANNNNNNTGC 2 cut(s) 2234, 2268
BciT130I CCWGG 1 cut(s) 1313
BciVI GTATCC 1 cut(s) 1477
BclI TGATCA 2 cut(s) 2979, 3040
BcoDI GTCTC 5 cut(s) 626, 1380, 1438, 2508, 3022
BfmI CTRYAG 4 cut(s) 1902, 2087, 2634, 2695
BfrI CTTAAG 1 cut(s) 955
BfuI GTATCC 1 cut(s) 1477
BglI GCCNNNNNGGC 1 cut(s) 2437
BglII AGATCT 8 cut(s) 427, 1054, 1099, 1227, 1411, 1667, 2083, 3157
BisI GCNGC 2 cut(s) 2124, 2837
BlnI CCTAGG 1 cut(s) 2452
BlsI GCNGC 2 cut(s) 2125, 2838
BmcAI AGTACT 2 cut(s) 1124, 1343
Bme1390I CCNGG 1 cut(s) 1313
Bme18I GGWCC 5 cut(s) 578, 1010, 1880, 2542, 2961
BmeRI GACNNNNNGTC 1 cut(s) 1871
BmgT120I GGNCC 8 cut(s) 578, 866, 1010, 1880, 2542, 2787, 2788, 2961
BmiI GGNNCC 5 cut(s) 868, 1882, 2649, 2789, 2988
BmrFI CCNGG 1 cut(s) 1313
BmrI ACTGGG 2 cut(s) 277, 1462
BmsI GCATC 4 cut(s) 53, 458, 891, 1865
BmtI GCTAGC 1 cut(s) 17
BmuI ACTGGG 2 cut(s) 277, 1462
BoxI GACNNNNGTC 1 cut(s) 2966
BpiI GAAGAC 4 cut(s) 200, 1258, 1693, 3144
Bpu10I CCTNAGC 4 cut(s) 663, 989, 1606, 2918
Bpu14I TTCGAA 2 cut(s) 1223, 1398
BpuEI CTTGAG 3 cut(s) 650, 2128, 3046
Bsa29I ATCGAT 1 cut(s) 483
BsaBI GATNNNNATC 2 cut(s) 1410, 1652
BsaHI GRCGYC 1 cut(s) 2412
BsaI GGTCTC 1 cut(s) 1438
BsaJI CCNNGG 2 cut(s) 2452, 3122
BsaWI WCCGGW 4 cut(s) 42, 802, 1301, 2650
BsaXI ACNNNNNCTCC 6 cut(s) 643, 673, 1959, 1971, 1989, 2001
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 668, 1454, 1868, 2422, 3128
Bse3DI GCAATG 2 cut(s) 1038, 1346
Bse8I GATNNNNATC 2 cut(s) 1410, 1652
BseAI TCCGGA 3 cut(s) 42, 802, 1301
BseBI CCWGG 1 cut(s) 1313
BseCI ATCGAT 1 cut(s) 483
BseDI CCNNGG 2 cut(s) 2452, 3122
BseGI GGATG 6 cut(s) 68, 1856, 1956, 2206, 2296, 3021
BseJI GATNNNNATC 2 cut(s) 1410, 1652
BseLI CCNNNNNNNGG 6 cut(s) 145, 668, 1454, 1868, 2422, 3128
BseMI GCAATG 2 cut(s) 1038, 1346
BseRI GAGGAG 4 cut(s) 1006, 1566, 1884, 2612
BseSI GKGCMC 1 cut(s) 2791
BseXI GCAGC 1 cut(s) 2110
BseYI CCCAGC 2 cut(s) 95, 315
Bsh1236I CGCG 1 cut(s) 194
BshFI GGCC 5 cut(s) 343, 867, 2431, 2789, 2923
BshNI GGYRCC 1 cut(s) 2647
BshVI ATCGAT 1 cut(s) 483
BsiSI CCGG 5 cut(s) 43, 803, 1302, 2651, 2730
BslFI GGGAC 1 cut(s) 2954
BslI CCNNNNNNNGG 6 cut(s) 145, 668, 1454, 1868, 2422, 3128
BsmAI GTCTC 5 cut(s) 626, 1380, 1438, 2508, 3022
BsmFI GGGAC 1 cut(s) 2954
BsmI GAATGC 4 cut(s) 1567, 2016, 2386, 2560
BsnI GGCC 5 cut(s) 343, 867, 2431, 2789, 2923
Bso31I GGTCTC 1 cut(s) 1438
Bsp119I TTCGAA 2 cut(s) 1223, 1398
Bsp120I GGGCCC 1 cut(s) 2787
Bsp1286I GDGCHC 1 cut(s) 2791
Bsp13I TCCGGA 3 cut(s) 42, 802, 1301
Bsp1407I TGTACA 3 cut(s) 1328, 1554, 2506
Bsp19I CCATGG 1 cut(s) 3122
BspACI CCGC 4 cut(s) 1189, 1643, 2836, 2959
BspANI GGCC 5 cut(s) 343, 867, 2431, 2789, 2923
BspDI ATCGAT 1 cut(s) 483
BspEI TCCGGA 3 cut(s) 42, 802, 1301
BspFNI CGCG 1 cut(s) 194
BspHI TCATGA 3 cut(s) 132, 1018, 1933
BspLI GGNNCC 5 cut(s) 868, 1882, 2649, 2789, 2988
BspMAI CTGCAG 1 cut(s) 2091
BspOI GCTAGC 1 cut(s) 17
BspPI GGATC 7 cut(s) 838, 923, 2135, 2838, 2851, 2981, 2994
BspT104I TTCGAA 2 cut(s) 1223, 1398
BspT107I GGYRCC 1 cut(s) 2647
BspTI CTTAAG 1 cut(s) 955
BspTNI GGTCTC 1 cut(s) 1438
BsrDI GCAATG 2 cut(s) 1038, 1346
BsrGI TGTACA 3 cut(s) 1328, 1554, 2506
BssECI CCNNGG 2 cut(s) 2452, 3122
BssNAI GTATAC 3 cut(s) 1623, 1774, 2356
BssNI GRCGYC 1 cut(s) 2412
BssSI CACGAG 3 cut(s) 391, 490, 2483
BssT1I CCWWGG 2 cut(s) 2452, 3122
Bst1107I GTATAC 3 cut(s) 1623, 1774, 2356
Bst2BI CACGAG 3 cut(s) 391, 490, 2483
Bst2UI CCWGG 1 cut(s) 1313
Bst4CI ACNGT 9 cut(s) 280, 655, 1039, 1361, 1627, 1679, 2321, 2699, 3036
Bst6I CTCTTC 5 cut(s) 353, 2003, 2236, 2397, 2589
BstACI GRCGYC 1 cut(s) 2412
BstAFI CTTAAG 1 cut(s) 955
BstAPI GCANNNNNTGC 1 cut(s) 455
BstAUI TGTACA 3 cut(s) 1328, 1554, 2506
BstBI TTCGAA 2 cut(s) 1223, 1398
BstC8I GCNNGC 6 cut(s) 15, 333, 974, 1309, 1567, 2948
BstDSI CCRYGG 1 cut(s) 3122
BstENI CCTNNNNNAGG 1 cut(s) 1866
BstF5I GGATG 6 cut(s) 68, 1856, 1956, 2206, 2296, 3021
BstFNI CGCG 1 cut(s) 194
BstHHI GCGC 2 cut(s) 196, 2386
BstMAI GTCTC 5 cut(s) 626, 1380, 1438, 2508, 3022
BstMWI GCNNNNNNNGC 5 cut(s) 92, 455, 2437, 2885, 2956
BstNI CCWGG 1 cut(s) 1313
BstNSI RCATGY 3 cut(s) 643, 1248, 2950
BstPAI GACNNNNGTC 1 cut(s) 2966
BstSCI CCNGG 1 cut(s) 1311
BstSFI CTRYAG 4 cut(s) 1902, 2087, 2634, 2695
BstSLI GKGCMC 1 cut(s) 2791
BstUI CGCG 1 cut(s) 194
BstV1I GCAGC 1 cut(s) 2110
BstV2I GAAGAC 4 cut(s) 200, 1258, 1693, 3144
BstXI CCANNNNNNTGG 1 cut(s) 854
BstZ17I GTATAC 3 cut(s) 1623, 1774, 2356
Bsu15I ATCGAT 1 cut(s) 483
BsuI GTATCC 1 cut(s) 1477
BsuRI GGCC 5 cut(s) 343, 867, 2431, 2789, 2923
BsuTUI ATCGAT 1 cut(s) 483
BtgI CCRYGG 1 cut(s) 3122
BtgZI GCGATG 1 cut(s) 2898
BtsCI GGATG 6 cut(s) 68, 1856, 1956, 2206, 2296, 3021
Cac8I GCNNGC 6 cut(s) 15, 333, 974, 1309, 1567, 2948
CciI TCATGA 3 cut(s) 132, 1018, 1933
CfoI GCGC 2 cut(s) 196, 2386
Cfr13I GGNCC 8 cut(s) 578, 866, 1010, 1880, 2542, 2787, 2788, 2961
ClaI ATCGAT 1 cut(s) 483
CseI GACGC 2 cut(s) 200, 2401
Csp6I GTAC 9 cut(s) 705, 1123, 1283, 1329, 1342, 1555, 2507, 3119, 3141
CviQI GTAC 9 cut(s) 705, 1123, 1283, 1329, 1342, 1555, 2507, 3119, 3141
DraI TTTAAA 1 cut(s) 2148
DriI GACNNNNNGTC 1 cut(s) 1871
Eam1104I CTCTTC 5 cut(s) 353, 2003, 2236, 2397, 2589
Eam1105I GACNNNNNGTC 1 cut(s) 1871
EarI CTCTTC 5 cut(s) 353, 2003, 2236, 2397, 2589
EciI GGCGGA 1 cut(s) 2974
Eco130I CCWWGG 2 cut(s) 2452, 3122
Eco147I AGGCCT 2 cut(s) 343, 2923
Eco24I GRGCYC 1 cut(s) 2791
Eco31I GGTCTC 1 cut(s) 1438
Eco32I GATATC 1 cut(s) 2283
Eco47I GGWCC 5 cut(s) 578, 1010, 1880, 2542, 2961
Eco57I CTGAAG 4 cut(s) 240, 1968, 2519, 3138
EcoNI CCTNNNNNAGG 1 cut(s) 1866
EcoO109I RGGNCCY 2 cut(s) 866, 2788
EcoRI GAATTC 1 cut(s) 798
EcoRII CCWGG 1 cut(s) 1311
EcoRV GATATC 1 cut(s) 2283
EcoT14I CCWWGG 2 cut(s) 2452, 3122
EcoT38I GRGCYC 1 cut(s) 2791
ErhI CCWWGG 2 cut(s) 2452, 3122
FaqI GGGAC 1 cut(s) 2954
FbaI TGATCA 2 cut(s) 2979, 3040
FblI GTMKAC 6 cut(s) 282, 1622, 1773, 2181, 2355, 2694
Fnu4HI GCNGC 2 cut(s) 2124, 2837
FokI GGATG 6 cut(s) 75, 1843, 1963, 2213, 2283, 3028
FriOI GRGCYC 1 cut(s) 2791
Fsp4HI GCNGC 2 cut(s) 2124, 2837
FspI TGCGCA 1 cut(s) 2385
GlaI GCGC 2 cut(s) 195, 2385
GluI GCNGC 2 cut(s) 2124, 2837
GsaI CCCAGC 2 cut(s) 99, 319
HaeIII GGCC 5 cut(s) 343, 867, 2431, 2789, 2923
HapII CCGG 5 cut(s) 43, 803, 1302, 2651, 2730
HgaI GACGC 2 cut(s) 200, 2401
HhaI GCGC 2 cut(s) 196, 2386
Hin1I GRCGYC 1 cut(s) 2412
Hin6I GCGC 2 cut(s) 194, 2384
HinP1I GCGC 2 cut(s) 194, 2384
HincII GTYRAC 2 cut(s) 190, 682
HindII GTYRAC 2 cut(s) 190, 682
HindIII AAGCTT 2 cut(s) 970, 2585
HinfI GANTC 9 cut(s) 691, 736, 823, 1458, 1822, 1872, 1907, 2489, 3089
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 5 cut(s) 43, 803, 1302, 2651, 2730
HphI GGTGA 5 cut(s) 163, 598, 1486, 2095, 3014
Hpy99I CGWCG 3 cut(s) 11, 123, 1444
HpyCH4III ACNGT 9 cut(s) 280, 655, 1039, 1361, 1627, 1679, 2321, 2699, 3036
HpyCH4IV ACGT 1 cut(s) 3149
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 455, 2437, 2885, 2956
HpySE526I ACGT 1 cut(s) 3149
Hsp92I GRCGYC 1 cut(s) 2412
HspAI GCGC 2 cut(s) 194, 2384
Kpn2I TCCGGA 3 cut(s) 42, 802, 1301
Ksp22I TGATCA 2 cut(s) 2979, 3040
KspAI GTTAAC 1 cut(s) 682
LmnI GCTCC 7 cut(s) 92, 380, 993, 1304, 1424, 1979, 2821
Lsp1109I GCAGC 1 cut(s) 2110
LweI GCATC 4 cut(s) 53, 458, 891, 1865
MaeII ACGT 1 cut(s) 3149
MaeIII GTNAC 4 cut(s) 462, 779, 920, 1801
MfeI CAATTG 3 cut(s) 87, 836, 2211
MhlI GDGCHC 1 cut(s) 2791
MlyI GAGTC 3 cut(s) 1467, 1881, 1916
MmeI TCCRAC 6 cut(s) 101, 800, 1463, 1663, 1945, 1957
MroI TCCGGA 3 cut(s) 42, 802, 1301
MroXI GAANNNNTTC 1 cut(s) 1265
MslI CAYNNNNRTG 4 cut(s) 146, 722, 1243, 2301
MspA1I CMGCKG 1 cut(s) 2836
MspCI CTTAAG 1 cut(s) 955
MspI CCGG 5 cut(s) 43, 803, 1302, 2651, 2730
MspR9I CCNGG 1 cut(s) 1313
MunI CAATTG 3 cut(s) 87, 836, 2211
Mva1269I GAATGC 4 cut(s) 1567, 2016, 2386, 2560
MvaI CCWGG 1 cut(s) 1313
MvnI CGCG 1 cut(s) 194
MwoI GCNNNNNNNGC 5 cut(s) 92, 455, 2437, 2885, 2956
NcoI CCATGG 1 cut(s) 3122
NheI GCTAGC 1 cut(s) 13
NlaIV GGNNCC 5 cut(s) 868, 1882, 2649, 2789, 2988
NmuCI GTSAC 1 cut(s) 920
NsbI TGCGCA 1 cut(s) 2385
NspI RCATGY 3 cut(s) 643, 1248, 2950
NspV TTCGAA 2 cut(s) 1223, 1398
OliI CACNNNNGTG 1 cut(s) 722
PaeI GCATGC 1 cut(s) 2950
PagI TCATGA 3 cut(s) 132, 1018, 1933
PceI AGGCCT 2 cut(s) 343, 2923
PciI ACATGT 2 cut(s) 639, 1244
PctI GAATGC 4 cut(s) 1567, 2016, 2386, 2560
PdmI GAANNNNTTC 1 cut(s) 1265
PfeI GAWTC 6 cut(s) 691, 736, 823, 1822, 2489, 3089
PflMI CCANNNNNTGG 1 cut(s) 3128
PkrI GCNGC 2 cut(s) 2125, 2838
PleI GAGTC 3 cut(s) 1466, 1880, 1915
PpsI GAGTC 3 cut(s) 1466, 1880, 1915
PscI ACATGT 2 cut(s) 639, 1244
PshAI GACNNNNGTC 1 cut(s) 2966
PshBI ATTAAT 1 cut(s) 983
Psp6I CCWGG 1 cut(s) 1311
PspFI CCCAGC 2 cut(s) 95, 315
PspGI CCWGG 1 cut(s) 1311
PspN4I GGNNCC 5 cut(s) 868, 1882, 2649, 2789, 2988
PspOMI GGGCCC 1 cut(s) 2787
PspPI GGNCC 8 cut(s) 578, 866, 1010, 1880, 2542, 2787, 2788, 2961
PstI CTGCAG 1 cut(s) 2091
RsaI GTAC 9 cut(s) 706, 1124, 1284, 1330, 1343, 1556, 2508, 3120, 3142
RsaNI GTAC 9 cut(s) 705, 1123, 1283, 1329, 1342, 1555, 2507, 3119, 3141
RseI CAYNNNNRTG 4 cut(s) 146, 722, 1243, 2301
SatI GCNGC 2 cut(s) 2124, 2837
Sau96I GGNCC 8 cut(s) 578, 866, 1010, 1880, 2542, 2787, 2788, 2961
ScaI AGTACT 2 cut(s) 1124, 1343
SchI GAGTC 3 cut(s) 1467, 1881, 1916
ScrFI CCNGG 1 cut(s) 1313
SduI GDGCHC 1 cut(s) 2791
SfaNI GCATC 4 cut(s) 53, 458, 891, 1865
SfcI CTRYAG 4 cut(s) 1902, 2087, 2634, 2695
SfuI TTCGAA 2 cut(s) 1223, 1398
SinI GGWCC 5 cut(s) 578, 1010, 1880, 2542, 2961
SmiMI CAYNNNNRTG 4 cut(s) 146, 722, 1243, 2301
SmlI CTYRAG 4 cut(s) 629, 955, 2107, 3025
SmoI CTYRAG 4 cut(s) 629, 955, 2107, 3025
SphI GCATGC 1 cut(s) 2950
SseBI AGGCCT 2 cut(s) 343, 2923
SsiI CCGC 4 cut(s) 1189, 1643, 2836, 2959
StuI AGGCCT 2 cut(s) 343, 2923
StyD4I CCNGG 1 cut(s) 1311
StyI CCWWGG 2 cut(s) 2452, 3122
TaaI ACNGT 9 cut(s) 280, 655, 1039, 1361, 1627, 1679, 2321, 2699, 3036
TaiI ACGT 1 cut(s) 3152
TaqI TCGA 5 cut(s) 483, 1223, 1398, 2752, 3067
TaqII GACCGA 1 cut(s) 20
TatI WGTACW 6 cut(s) 704, 1122, 1328, 1341, 1554, 2506
TauI GCSGC 1 cut(s) 2839
TfiI GAWTC 6 cut(s) 691, 736, 823, 1822, 2489, 3089
TseFI GTSAC 1 cut(s) 920
TseI GCWGC 1 cut(s) 2123
Tsp45I GTSAC 1 cut(s) 920
TspDTI ATGAA 9 cut(s) 92, 149, 1007, 1796, 1820, 1993, 2283, 2759, 3099
TspGWI ACGGA 3 cut(s) 1705, 2923, 2956
Van91I CCANNNNNTGG 1 cut(s) 3128
Vha464I CTTAAG 1 cut(s) 955
VpaK11BI GGWCC 5 cut(s) 578, 1010, 1880, 2542, 2961
VspI ATTAAT 1 cut(s) 983
XagI CCTNNNNNAGG 1 cut(s) 1866
XapI RAATTY 5 cut(s) 798, 1319, 1394, 1430, 2812
XceI RCATGY 3 cut(s) 643, 1248, 2950
XmaJI CCTAGG 1 cut(s) 2452
XmiI GTMKAC 6 cut(s) 282, 1622, 1773, 2181, 2355, 2694
XmnI GAANNNNTTC 1 cut(s) 1265
ZrmI AGTACT 2 cut(s) 1124, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.