RchiOBHm_Chr5g0012201

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8124881 .. 8131569
6689 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29280

Sequence Viewer

Length: 3036 bp
ATGCATGATAAGAAGAAGATGAAGCATGACATCATTATGCTCATGATCTTGGTTCTCTGCTTGATCTGCATAACATCACTCGAAGTTGAAGCAAAATGTTCGCCTCTTCCGCCTACTGAAGTGGAAGCACTAAAAGAAATTGGTAAGGAATTGGGGAAAAGGGACTGGAACTTTGAAGAAGACCCATGTAGCAATAAGTCAAGTTGGGCCAGCCCATTCGACACAAAGTCTGAGGATTGGCCTTCATCCATGAACAATGTCACTTGCAGCTGCTCCTTCCCTGATGAAACATACCACGTTATCAGCATAATTCTTCAAGGACAAGATTTACCTGGTGTACTTCCACCATCTATTGCGAGGTTACCCTACCTGACAACTCTTGATTTGAATAGGAACTACCTCACTGGTGAGATACCGCGTCAATGGGCTTCTACAAAGCTGGAACATCTGTCTGTTTCGGTGAACAATTTACCGGCCGGATCAATCCCTAGCTACTTGGGAAATATTACCACTCTACAGTATCTGAGCCTAGAGACTAACCGGTTTTCTGGAACTGTTCCTTCTGAGCTTGGTAATTTGGTTAACTTAACGACTCTCGTTCTTAGTGCAAACAATCTCACCGGAGAGTTGCCTATGGCTTTGACTAATCTGACTAAATTGATTGAACTAAGGATAAGCAGTAACAGCTTTACTGGAACAATAGCTCCCGAGTTTTTTCAAAGTTGGAATCACCTACAGAAATTAGAGATCCAAGCTAGTGGTTTAGAAGGGCCCATTCCATCTAGCATTTCTATGTTGAAAAAATTAACAGAGCTAAGGATCAGTGACTTAAATGGAAAGGGGTCAGAATTTCCACTCTTGAATGAAACTACGAACTTGACAAGATTAATGCTGAGGAGCTGTAATTTATCTGGACGTATTCCTGATTACATATCTGCAGTGAAGTCATTGAAGATGTTGGATCTCAGCTTCAACAGATTGGTTGGAAGAATTCCTGAATTTAAAAGCGTACAGTACTTGTATTTGACAAACAACTTGCTCACTGGGCCTATTCCAGACTGGATCAATAGCAGAGATTGGCGCTACTTTATAGATATTTCTTACAATAATTTTTCTGAGATCTCTGCACAGCTACAGTCTTGTACAGGAACCCTGAACTCCTTTAAAAGTTTTACTGCACGAGACAACTTATTATCAGAAGAGTGTCTGAAGAAATATCCTTGTGGCAAAGATCACTACTCATTGCATATAAATTGTGGTGGAGAAGCAACCACTATTAGAGGAACCAAATTTGAAGAGGATGCAGACCTAGGAGGTCCAGCAAAATTCTTCTCTGTGAATATCTGGGGGTTCAGTAGCACTGGACAGTTCTGGGATAAGAACCCTACACCTCAAGATTACATAGCAAAGAATGCATCTTTACTCACAATGGAGAACTCTGAGTTGTACACAAATGCACGCCTCTCTCCTCTCTCTCTTACATACTATGCACGCTGCCTTGGGAACGGAATCTATAATGTGAAGCTTCACTTTGTAGAGATAATAATCAGAGGCAATGCATCTTTTTACAGTCTTGGGAGACGGGTATTTGATGTTTATATTCAGGAGCAACTGGTGCTCAAGGAGTTTGACATTGCAAAGGAAGCACAAGGGACTGATAAGGAGGTCATTAAGAAATTCAAAGCAGTTGTTAAGAATAAAACACTAGAGATCCGATTTCATTGGTCAGGGAAAGGGACAACAGGTTCCCCACATAAAGGAACATATGGTCCCCTTATATCAGCTATCTCAATAAATTCTGACTTCAGGCCTCCTCTTGGTAGAGAAACAAAGGCACTTATTGTGGTTGGAGCTTCAGTTTTGTGCCTTGCTTTATTGATTTTAGGCATTCTTTGGTGGCAAGGCTGTCTGAACAGCAAGACATTAAGGGAAAGAGCTCTGAGAGGACTCGACCTGCAAACTGGCTTTTTCACCTTCAAGCAAATCAAAGCTGCCACTAACAACTTTGATCCAACAAACAAAATTGGAGAAGGTGGTTTTGGGCCTGTCTACAAGGGTATATTAAGTGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCAAAGCAGGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTTGTTTGCAGCACCCAAATCTGGTTAGATTGTATGGTTGTTGTATTGAAGCAAACCAATTACTGTTGGTATATGAGTACATGGAAAACAATAGCCTTGCACGCGCTTTGTTCGGTCCAGAGGATGGTCCCCTAAAATTGAACTGGCGTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCATGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATGTGTTATTGGACCAAGACCTCAATGCAAAGATATCGGACTTCGGTTTGGCCAAGCTTGATGAAGAAGAGAAAAGTCACATAAGCACCAGGATTGCTGGAACTATAGGATACATGGCGCCAGAATATGCCCTGTGGGGTTGTTTGACCTATAAAGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACATGAAATATCGACCCAATGAAAATATTCAATGTCTTATGGATTGGGCCCTTGTTTTGCAACAAAAAGGGAACTTACTGGAGCTGGTGGATCCGAGGTTGGGGTCCGATTTCAGTAAGAAAGAGGCGATTAGAACAATCAAAGTAGCTCTATTATGCGCCAATCCAACAGCTGCACTTAGGCCTATCATGTCTGAAGTAGTGAGTATGCTTGAAGGGCGGACCCCCGTGGATGCAGTGGTTCTGGATCCAAGCATCCATGGTGATGAAATGACGAGGTTAAGAGCCTTTGAAGACCAGTTTGATCACATTACTGCACAAGGGAGCTCCCCAAGTGGAAGTCATAGCCTCATGCGTTCATTAGATGGACCATGGACCGGTTCTTCAGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAG

Protein Analysis

1011

Amino Acids

112.45

Weight (kDa)

7.2

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 164 - 279 6.8e-12 Leucine-rich repeat region
Malectin PF11721 414 - 596 1e-34 Malectin domain
Pkinase PF00069 672 - 878 3.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 673 - 879 3.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1962
AccB1I GGYRCC 1 cut(s) 2515
AccB7I CCANNNNNTGG 1 cut(s) 2276
AccI GTMKAC 2 cut(s) 2049, 2562
AccII CGCG 2 cut(s) 418, 2256
AciI CCGC 3 cut(s) 110, 416, 2827
AcoI YGGCCR 2 cut(s) 474, 2448
AcsI RAATTY 8 cut(s) 848, 990, 998, 1289, 1325, 1676, 1795, 2126
AcuI CTGAAG 7 cut(s) 138, 1229, 1789, 1839, 2823, 2976, 2994
AcyI GRCGYC 1 cut(s) 2516
AfaI GTAC 9 cut(s) 339, 1011, 1016, 1144, 1448, 2074, 2231, 2302, 2376
AfiI CCNNNNNNNGG 6 cut(s) 1757, 1817, 2173, 2276, 2708, 2984
AgeI ACCGGT 2 cut(s) 540, 2984
AhdI GACNNNNNGTC 1 cut(s) 226
AjnI CCWGG 2 cut(s) 331, 2486
AjuI GAANNNNNNNTTGG 4 cut(s) 2022, 2054, 2390, 2422
AloI GAACNNNNNNTCC 6 cut(s) 688, 720, 1729, 1753, 1761, 1785
Alw21I GWGCWC 3 cut(s) 1620, 1939, 2936
Alw26I GTCTC 4 cut(s) 527, 1176, 1573, 2376
AlwNI CAGNNNCTG 1 cut(s) 523
Ama87I CYCGRG 1 cut(s) 707
ApaI GGGCCC 2 cut(s) 774, 2659
ApeKI GCWGC 6 cut(s) 267, 270, 1494, 1991, 2161, 2780
ApoI RAATTY 8 cut(s) 848, 990, 998, 1289, 1325, 1676, 1795, 2126
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
AseI ATTAAT 1 cut(s) 887
AsiGI ACCGGT 2 cut(s) 540, 2984
Asp700I GAANNNNTTC 1 cut(s) 2634
AspA2I CCTAGG 2 cut(s) 1309, 2320
AspLEI GCGC 4 cut(s) 1083, 2258, 2518, 2768
AsuHPI GGTGA 6 cut(s) 419, 472, 610, 722, 1963, 2882
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 9 cut(s) 1316, 1769, 2267, 2279, 2410, 2712, 2829, 2975, 2982
AvrII CCTAGG 2 cut(s) 1309, 2320
BaeGI GKGCMC 2 cut(s) 774, 2659
BalI TGGCCA 1 cut(s) 2450
BamHI GGATCC 2 cut(s) 2698, 2854
BanI GGYRCC 1 cut(s) 2515
BanII GRGCYC 4 cut(s) 774, 1939, 2659, 2936
BauI CACGAG 1 cut(s) 1179
BbsI GAAGAC 3 cut(s) 186, 2907, 3000
Bbv12I GWGCWC 3 cut(s) 1620, 1939, 2936
BbvCI CCTCAGC 1 cut(s) 893
BbvI GCAGC 6 cut(s) 257, 279, 1481, 1978, 2173, 2767
BccI CCATC 5 cut(s) 355, 787, 2063, 2270, 2966
BcgI CGANNNNNNTGC 6 cut(s) 81, 115, 2102, 2136, 2415, 2449
BciT130I CCWGG 2 cut(s) 333, 2488
BciVI GTATCC 1 cut(s) 2501
BclI TGATCA 1 cut(s) 2911
BcoDI GTCTC 4 cut(s) 527, 1176, 1573, 2376
BfaI CTAG 7 cut(s) 489, 530, 756, 783, 1310, 1706, 2321
BfmI CTRYAG 6 cut(s) 515, 734, 936, 1133, 2502, 2563
BfoI RGCGCY 2 cut(s) 1084, 2519
BfuAI ACCTGC 1 cut(s) 1962
BfuI GTATCC 1 cut(s) 2501
BglII AGATCT 2 cut(s) 1119, 3013
BisI GCNGC 6 cut(s) 268, 271, 1495, 1992, 2162, 2781
BlnI CCTAGG 2 cut(s) 1309, 2320
BlsI GCNGC 6 cut(s) 269, 272, 1496, 1993, 2163, 2782
BmcAI AGTACT 1 cut(s) 1016
Bme1390I CCNGG 2 cut(s) 333, 2488
Bme18I GGWCC 9 cut(s) 1316, 1769, 2267, 2279, 2410, 2712, 2829, 2975, 2982
BmeRI GACNNNNNGTC 1 cut(s) 226
BmeT110I CYCGRG 1 cut(s) 707
BmrFI CCNGG 2 cut(s) 333, 2488
BmrI ACTGGG 1 cut(s) 1053
BmsI GCATC 5 cut(s) 1291, 1424, 1568, 2830, 2871
BmuI ACTGGG 1 cut(s) 1053
BpiI GAAGAC 3 cut(s) 186, 2907, 3000
BpmI CTGGAG 1 cut(s) 2708
Bpu10I CCTNAGC 2 cut(s) 815, 893
BpuEI CTTGAG 2 cut(s) 1377, 1604
BsaBI GATNNNNATC 1 cut(s) 1544
BsaHI GRCGYC 1 cut(s) 2516
BsaJI CCNNGG 7 cut(s) 1309, 1498, 2320, 2702, 2835, 2866, 2978
BsaWI WCCGGW 3 cut(s) 540, 620, 2984
BsaXI ACNNNNNCTCC 4 cut(s) 688, 718, 1842, 1872
Bsc4I CCNNNNNNNGG 6 cut(s) 1757, 1817, 2173, 2276, 2708, 2984
Bse118I RCCGGY 3 cut(s) 472, 540, 2984
Bse3DI GCAATG 3 cut(s) 1241, 1561, 1632
Bse8I GATNNNNATC 1 cut(s) 1544
BseBI CCWGG 2 cut(s) 333, 2488
BseDI CCNNGG 7 cut(s) 1309, 1498, 2320, 2702, 2835, 2866, 2978
BseGI GGATG 5 cut(s) 245, 1306, 2281, 2845, 2862
BseJI GATNNNNATC 1 cut(s) 1544
BseLI CCNNNNNNNGG 6 cut(s) 1757, 1817, 2173, 2276, 2708, 2984
BseMI GCAATG 3 cut(s) 1241, 1561, 1632
BseMII CTCAG 8 cut(s) 222, 515, 555, 884, 979, 1107, 1431, 1931
BseRI GAGGAG 3 cut(s) 910, 1458, 1803
BseSI GKGCMC 2 cut(s) 774, 2659
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 6 cut(s) 257, 279, 1481, 1978, 2173, 2767
BsgI GTGCAG 4 cut(s) 1110, 1161, 2766, 2907
Bsh1236I CGCG 2 cut(s) 418, 2256
Bsh1285I CGRYCG 1 cut(s) 477
BshNI GGYRCC 1 cut(s) 2515
BshTI ACCGGT 2 cut(s) 540, 2984
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 3 cut(s) 1620, 1939, 2936
BsiHKCI CYCGRG 1 cut(s) 707
BsiSI CCGG 5 cut(s) 473, 477, 541, 621, 2985
BslFI GGGAC 5 cut(s) 176, 1666, 1750, 1755, 2265
BslI CCNNNNNNNGG 6 cut(s) 1757, 1817, 2173, 2276, 2708, 2984
BsmAI GTCTC 4 cut(s) 527, 1176, 1573, 2376
BsmBI CGTCTC 1 cut(s) 1573
BsmFI GGGAC 5 cut(s) 176, 1666, 1750, 1755, 2265
BsmI GAATGC 2 cut(s) 1417, 1887
BsoBI CYCGRG 1 cut(s) 707
Bsp120I GGGCCC 2 cut(s) 770, 2655
Bsp1286I GDGCHC 5 cut(s) 774, 1620, 1939, 2659, 2936
Bsp1407I TGTACA 3 cut(s) 1142, 1446, 2374
Bsp19I CCATGG 2 cut(s) 2866, 2978
BspACI CCGC 3 cut(s) 110, 416, 2827
BspCNI CTCAG 8 cut(s) 223, 516, 556, 885, 978, 1108, 1432, 1932
BspFNI CGCG 2 cut(s) 418, 2256
BspHI TCATGA 1 cut(s) 42
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 1962
BspT107I GGYRCC 1 cut(s) 2515
BsrDI GCAATG 3 cut(s) 1241, 1561, 1632
BsrFI RCCGGY 3 cut(s) 472, 540, 2984
BsrGI TGTACA 3 cut(s) 1142, 1446, 2374
BssAI RCCGGY 3 cut(s) 472, 540, 2984
BssECI CCNNGG 7 cut(s) 1309, 1498, 2320, 2702, 2835, 2866, 2978
BssNI GRCGYC 1 cut(s) 2516
BssSI CACGAG 1 cut(s) 1179
BssT1I CCWWGG 5 cut(s) 1309, 1498, 2320, 2866, 2978
Bst2BI CACGAG 1 cut(s) 1179
Bst2UI CCWGG 2 cut(s) 333, 2488
Bst4CI ACNGT 9 cut(s) 519, 556, 1014, 1137, 1368, 1571, 2217, 2567, 2593
Bst6I CTCTTC 4 cut(s) 111, 1194, 1290, 2460
BstACI GRCGYC 1 cut(s) 2516
BstAPI GCANNNNNTGC 2 cut(s) 1412, 1615
BstAUI TGTACA 3 cut(s) 1142, 1446, 2374
BstC8I GCNNGC 4 cut(s) 211, 1459, 1492, 2254
BstDSI CCRYGG 3 cut(s) 2835, 2866, 2978
BstEII GGTNACC 1 cut(s) 360
BstF5I GGATG 5 cut(s) 245, 1306, 2281, 2845, 2862
BstFNI CGCG 2 cut(s) 418, 2256
BstH2I RGCGCY 2 cut(s) 1084, 2519
BstHHI GCGC 4 cut(s) 1083, 2258, 2518, 2768
BstMAI GTCTC 4 cut(s) 527, 1176, 1573, 2376
BstMCI CGRYCG 1 cut(s) 477
BstNI CCWGG 2 cut(s) 333, 2488
BstPI GGTNACC 1 cut(s) 360
BstSCI CCNGG 2 cut(s) 331, 2486
BstSFI CTRYAG 6 cut(s) 515, 734, 936, 1133, 2502, 2563
BstSLI GKGCMC 2 cut(s) 774, 2659
BstUI CGCG 2 cut(s) 418, 2256
BstV1I GCAGC 6 cut(s) 257, 279, 1481, 1978, 2173, 2767
BstV2I GAAGAC 3 cut(s) 186, 2907, 3000
BstX2I RGATCY 7 cut(s) 747, 961, 1119, 1710, 2698, 2854, 3013
BstXI CCANNNNNNTGG 1 cut(s) 758
BstYI RGATCY 7 cut(s) 747, 961, 1119, 1710, 2698, 2854, 3013
BstZI CGGCCG 1 cut(s) 474
BsuI GTATCC 1 cut(s) 2501
BtgI CCRYGG 3 cut(s) 2835, 2866, 2978
BtsCI GGATG 5 cut(s) 245, 1306, 2281, 2845, 2862
BtsI GCAGTG 3 cut(s) 945, 2370, 2850
BtsIMutI CAGTG 7 cut(s) 402, 829, 945, 1041, 1359, 2370, 2850
BveI ACCTGC 1 cut(s) 1962
Cac8I GCNNGC 4 cut(s) 211, 1459, 1492, 2254
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 42
CfoI GCGC 4 cut(s) 1083, 2258, 2518, 2768
Cfr10I RCCGGY 3 cut(s) 472, 540, 2984
CseI GACGC 1 cut(s) 407
CsiI ACCWGGT 1 cut(s) 331
Csp6I GTAC 9 cut(s) 338, 1010, 1015, 1143, 1447, 2073, 2230, 2301, 2375
CspAI ACCGGT 2 cut(s) 540, 2984
CviQI GTAC 9 cut(s) 338, 1010, 1015, 1143, 1447, 2073, 2230, 2301, 2375
DinI GGCGCC 1 cut(s) 2517
DraI TTTAAA 2 cut(s) 1003, 1165
DriI GACNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 2 cut(s) 474, 2448
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 4 cut(s) 111, 1194, 1290, 2460
Eam1105I GACNNNNNGTC 1 cut(s) 226
EarI CTCTTC 4 cut(s) 111, 1194, 1290, 2460
EciI GGCGGA 2 cut(s) 99, 2842
Ecl136II GAGCTC 2 cut(s) 1937, 2934
EclXI CGGCCG 1 cut(s) 474
Eco130I CCWWGG 5 cut(s) 1309, 1498, 2320, 2866, 2978
Eco147I AGGCCT 2 cut(s) 1810, 2791
Eco24I GRGCYC 4 cut(s) 774, 1939, 2659, 2936
Eco32I GATATC 1 cut(s) 2433
Eco47I GGWCC 9 cut(s) 1316, 1769, 2267, 2279, 2410, 2712, 2829, 2975, 2982
Eco52I CGGCCG 1 cut(s) 474
Eco53kI GAGCTC 2 cut(s) 1937, 2934
Eco57I CTGAAG 7 cut(s) 138, 1229, 1789, 1839, 2823, 2976, 2994
Eco88I CYCGRG 1 cut(s) 707
Eco91I GGTNACC 1 cut(s) 360
EcoICRI GAGCTC 2 cut(s) 1937, 2934
EcoO109I RGGNCCY 2 cut(s) 770, 2656
EcoO65I GGTNACC 1 cut(s) 360
EcoRI GAATTC 1 cut(s) 990
EcoRII CCWGG 2 cut(s) 331, 2486
EcoRV GATATC 1 cut(s) 2433
EcoT14I CCWWGG 5 cut(s) 1309, 1498, 2320, 2866, 2978
EcoT22I ATGCAT 3 cut(s) 6, 1417, 1561
EcoT38I GRGCYC 4 cut(s) 774, 1939, 2659, 2936
EgeI GGCGCC 1 cut(s) 2517
EheI GGCGCC 1 cut(s) 2517
ErhI CCWWGG 5 cut(s) 1309, 1498, 2320, 2866, 2978
Esp3I CGTCTC 1 cut(s) 1573
FalI AAGNNNNNCTT 2 cut(s) 1514, 1546
FaqI GGGAC 5 cut(s) 176, 1666, 1750, 1755, 2265
FauNDI CATATG 1 cut(s) 1765
FbaI TGATCA 1 cut(s) 2911
FblI GTMKAC 2 cut(s) 2049, 2562
Fnu4HI GCNGC 6 cut(s) 268, 271, 1495, 1992, 2162, 2781
FokI GGATG 5 cut(s) 232, 1313, 2288, 2849, 2852
FriOI GRGCYC 4 cut(s) 774, 1939, 2659, 2936
Fsp4HI GCNGC 6 cut(s) 268, 271, 1495, 1992, 2162, 2781
FspBI CTAG 7 cut(s) 489, 530, 756, 783, 1310, 1706, 2321
GlaI GCGC 4 cut(s) 1082, 2257, 2517, 2767
GluI GCNGC 6 cut(s) 268, 271, 1495, 1992, 2162, 2781
GsuI CTGGAG 1 cut(s) 2708
HaeII RGCGCY 2 cut(s) 1084, 2519
HapII CCGG 5 cut(s) 473, 477, 541, 621, 2985
HgaI GACGC 1 cut(s) 407
HhaI GCGC 4 cut(s) 1083, 2258, 2518, 2768
Hin1I GRCGYC 1 cut(s) 2516
Hin6I GCGC 4 cut(s) 1081, 2256, 2516, 2766
HinP1I GCGC 4 cut(s) 1081, 2256, 2516, 2766
HincII GTYRAC 1 cut(s) 583
HindII GTYRAC 1 cut(s) 583
HindIII AAGCTT 2 cut(s) 1523, 2453
HinfI GANTC 5 cut(s) 592, 727, 1509, 1947, 2357
HpaI GTTAAC 1 cut(s) 583
HpaII CCGG 5 cut(s) 473, 477, 541, 621, 2985
HphI GGTGA 6 cut(s) 419, 472, 610, 722, 1963, 2882
Hpy166II GTNNAC 7 cut(s) 338, 463, 583, 1449, 2050, 2134, 2563
Hpy8I GTNNAC 7 cut(s) 338, 463, 583, 1449, 2050, 2134, 2563
HpyAV CCTTC 8 cut(s) 252, 286, 570, 761, 1984, 2024, 2362, 2816
HpyCH4III ACNGT 9 cut(s) 519, 556, 1014, 1137, 1368, 1571, 2217, 2567, 2593
HpyCH4IV ACGT 3 cut(s) 297, 916, 3005
HpySE526I ACGT 3 cut(s) 297, 916, 3005
Hsp92I GRCGYC 1 cut(s) 2516
HspAI GCGC 4 cut(s) 1081, 2256, 2516, 2766
KasI GGCGCC 1 cut(s) 2515
Ksp22I TGATCA 1 cut(s) 2911
KspAI GTTAAC 1 cut(s) 583
LmnI GCTCC 8 cut(s) 278, 709, 897, 1606, 1850, 2689, 2931, 2939
Lsp1109I GCAGC 6 cut(s) 257, 279, 1481, 1978, 2173, 2767
LweI GCATC 5 cut(s) 1291, 1424, 1568, 2830, 2871
MabI ACCWGGT 1 cut(s) 331
MaeI CTAG 7 cut(s) 489, 530, 756, 783, 1310, 1706, 2321
MaeII ACGT 3 cut(s) 297, 916, 3005
MaeIII GTNAC 6 cut(s) 259, 360, 680, 824, 2474, 2995
MflI RGATCY 7 cut(s) 747, 961, 1119, 1710, 2698, 2854, 3013
MhlI GDGCHC 5 cut(s) 774, 1620, 1939, 2659, 2936
MlsI TGGCCA 1 cut(s) 2450
MluNI TGGCCA 1 cut(s) 2450
Mly113I GGCGCC 1 cut(s) 2516
MlyI GAGTC 2 cut(s) 586, 1941
MmeI TCCRAC 6 cut(s) 704, 939, 964, 1828, 2036, 2798
Mox20I TGGCCA 1 cut(s) 2450
Mph1103I ATGCAT 3 cut(s) 6, 1417, 1561
MroXI GAANNNNTTC 1 cut(s) 2634
MscI TGGCCA 1 cut(s) 2450
MslI CAYNNNNRTG 3 cut(s) 35, 791, 2871
Msp20I TGGCCA 1 cut(s) 2450
MspA1I CMGCKG 2 cut(s) 270, 2780
MspI CCGG 5 cut(s) 473, 477, 541, 621, 2985
MspR9I CCNGG 2 cut(s) 333, 2488
Mva1269I GAATGC 2 cut(s) 1417, 1887
MvaI CCWGG 2 cut(s) 333, 2488
MvnI CGCG 2 cut(s) 418, 2256
NarI GGCGCC 1 cut(s) 2516
NcoI CCATGG 2 cut(s) 2866, 2978
NdeI CATATG 1 cut(s) 1765
NmuCI GTSAC 3 cut(s) 259, 824, 2474
NsiI ATGCAT 3 cut(s) 6, 1417, 1561
PagI TCATGA 1 cut(s) 42
PceI AGGCCT 2 cut(s) 1810, 2791
PctI GAATGC 2 cut(s) 1417, 1887
PdmI GAANNNNTTC 1 cut(s) 2634
PfeI GAWTC 3 cut(s) 727, 1509, 2357
PflMI CCANNNNNTGG 1 cut(s) 2276
PinAI ACCGGT 2 cut(s) 540, 2984
PkrI GCNGC 6 cut(s) 269, 272, 1496, 1993, 2163, 2782
PleI GAGTC 2 cut(s) 586, 1941
PluTI GGCGCC 1 cut(s) 2519
PpsI GAGTC 2 cut(s) 586, 1941
PshBI ATTAAT 1 cut(s) 887
Psp124BI GAGCTC 2 cut(s) 1939, 2936
Psp6I CCWGG 2 cut(s) 331, 2486
PspEI GGTNACC 1 cut(s) 360
PspGI CCWGG 2 cut(s) 331, 2486
PspOMI GGGCCC 2 cut(s) 770, 2655
PstI CTGCAG 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 7 cut(s) 747, 961, 1119, 1710, 2698, 2854, 3013
PvuII CAGCTG 2 cut(s) 270, 2780
RsaI GTAC 9 cut(s) 339, 1011, 1016, 1144, 1448, 2074, 2231, 2302, 2376
RsaNI GTAC 9 cut(s) 338, 1010, 1015, 1143, 1447, 2073, 2230, 2301, 2375
RseI CAYNNNNRTG 3 cut(s) 35, 791, 2871
SacI GAGCTC 2 cut(s) 1939, 2936
SatI GCNGC 6 cut(s) 268, 271, 1495, 1992, 2162, 2781
ScaI AGTACT 1 cut(s) 1016
SchI GAGTC 2 cut(s) 586, 1941
ScrFI CCNGG 2 cut(s) 333, 2488
SduI GDGCHC 5 cut(s) 774, 1620, 1939, 2659, 2936
SexAI ACCWGGT 1 cut(s) 331
SfaNI GCATC 5 cut(s) 1291, 1424, 1568, 2830, 2871
SfcI CTRYAG 6 cut(s) 515, 734, 936, 1133, 2502, 2563
SfoI GGCGCC 1 cut(s) 2517
SinI GGWCC 9 cut(s) 1316, 1769, 2267, 2279, 2410, 2712, 2829, 2975, 2982
SmiMI CAYNNNNRTG 3 cut(s) 35, 791, 2871
SmlI CTYRAG 2 cut(s) 1392, 1619
SmoI CTYRAG 2 cut(s) 1392, 1619
SseBI AGGCCT 2 cut(s) 1810, 2791
SsiI CCGC 3 cut(s) 110, 416, 2827
SspDI GGCGCC 1 cut(s) 2515
SspI AATATT 2 cut(s) 505, 2635
SspMI CTAG 7 cut(s) 489, 530, 756, 783, 1310, 1706, 2321
SstI GAGCTC 2 cut(s) 1939, 2936
StuI AGGCCT 2 cut(s) 1810, 2791
StyD4I CCNGG 2 cut(s) 331, 2486
StyI CCWWGG 5 cut(s) 1309, 1498, 2320, 2866, 2978
TaaI ACNGT 9 cut(s) 519, 556, 1014, 1137, 1368, 1571, 2217, 2567, 2593
TaiI ACGT 3 cut(s) 300, 919, 3008
TaqI TCGA 4 cut(s) 81, 219, 1950, 2620
TaqII GACCGA 1 cut(s) 2255
TatI WGTACW 6 cut(s) 337, 1014, 1142, 1446, 2229, 2374
TfiI GAWTC 3 cut(s) 727, 1509, 2357
TscAI CASTG 7 cut(s) 409, 829, 945, 1048, 1366, 2370, 2850
TseFI GTSAC 3 cut(s) 259, 824, 2474
TseI GCWGC 6 cut(s) 267, 270, 1494, 1991, 2161, 2780
Tsp45I GTSAC 3 cut(s) 259, 824, 2474
TspGWI ACGGA 1 cut(s) 1521
TspRI CASTG 7 cut(s) 409, 829, 945, 1048, 1366, 2370, 2850
Van91I CCANNNNNTGG 1 cut(s) 2276
VpaK11BI GGWCC 9 cut(s) 1316, 1769, 2267, 2279, 2410, 2712, 2829, 2975, 2982
VspI ATTAAT 1 cut(s) 887
XapI RAATTY 8 cut(s) 848, 990, 998, 1289, 1325, 1676, 1795, 2126
XmaJI CCTAGG 2 cut(s) 1309, 2320
XmiI GTMKAC 2 cut(s) 2049, 2562
XmnI GAANNNNTTC 1 cut(s) 2634
XspI CTAG 7 cut(s) 489, 530, 756, 783, 1310, 1706, 2321
ZrmI AGTACT 1 cut(s) 1016
Zsp2I ATGCAT 3 cut(s) 6, 1417, 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.