Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

3948145 .. 3951056

Gene Structure 2912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g06830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGTTTCCATACTCAAATGGAAATTACACAACCGCACGACTTTCTCCTCTGTCGCTCACCTACTATGCCCATTGCTTAGCAAATGGAAATTACACTGTGAAACTACACTTCGCAGAAATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGAATGTTTGATGTTTATATCCAGGACAAATTGGTATTGAAGGATTTTGATATTAGAAAGGAAGCAATGGGGGTTAACAAGGAAGTGATCAAGGTATTTAATGCTGTTGTTAATGTTAAGACTCTGCTGATCCGCTTTCAGTGGGCTGGGAGAGGAACAACTAATGTTCCGCGAAGAGGAATATATGGTTCTCTTATATCAGCCATTTCAGTGCAGTCTGATTTCAAGCCCCCTGATGACAGTAAAAGGACGATTTACATTGTGGTTGCAGTTGTTTCAGCTTTATGCCTTCTCTTCTTGATTATTGGCATTCTTTGGTTAAGAGGCTGTTTCGGACACAAGACAACCAGGGAAGAAGAACTGAGAGGATTGGATCTGCAAACTGGTTATTTTAAATTCAAACAAATTAAAGCTGCCACTAATAACTTTGATCCTGCAAACAAGCTTGGGGAAGGTGGCTTCGGAGCTGTTTACAAGGGAGAATTATTGGATGGTAGTTTTATTGCCGTTAAGCAACTTTCTTCAAAATCGAAGCAGGGAAATCATGAATTCATAAATGAAATAGGCATGATGTCTGCATTACAACACCCAAATCTTGTTAAACTGTATGGATGTTGCACGGAAGGAAATCAATTATTGTTGGTATACGAATACATGGAGAACAATAGCCTTTCACGTACTTTATTTGGTTCAGAGGAAGGGCTAAGGAAATTGAACTGGCCAACAAGGCAGAAAATATGTGTTGGTATTGCAAGGGGTCTTGCTTTCCTGCACGATGGAACCTTGAAAATTGTTCATAGAGATATCAAAACAACCAACATATTGCTGGATAGGGACCTTAATGCTAAGATAGCTGACTTTGGTTTGGCTAAGCTGGACGAAGAGCATACTCATATCAGCACCAGAGTTGCTGGAACTATAGGATACATGGCGTCTGAGTATGCATTATGGGGATATTTAACCGATAAGGCAGATGTCTACAGTTTTGGGGTTGTAGCATTGGAACTGGTATCAGGGAAAAACAACATCAAATATCGGCCGAACGAAAATTTTGTATGCCTTCTAGATTGGGCCCTTGTTTTACAACAGAAAGGCAATCTAATGGAGCTGGTGGATCCAAAGTTAGGTTCTGGGTTCAACAAGGAAGAGGCACTTAGAATGATAAAGGTGGCTCTACTATGCGCCAATTCATCACCGGCACTAAGACCAACAATGTCTCAAGTGGTGAGCATGCTTGAAGGCCGAACTGATGTTCATGAAGTGACCATAAATCCAAGTATTTATGGTGATGAAATGAGGTTTAAGGCCTTCACAGAGGACTCTGATCCGGATATGCAAGAGAGCTTTGAGGAGACTCGAAGCTTCATTCGCTCGGATTCAAAATGGACAGCCTCTTCCTCATTGAATATTGATAACAGTGAGACTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

530

Amino Acids

59.48

Weight (kDa)

8.42

Isoelectric Point (pI)

33.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	9 - 122	5.6e-30	Malectin domain
Pkinase	PF00069	199 - 463	1.3e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	200 - 464	3e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	804, 1137
AccII	CGCG	1 cut(s)	331
AccIII	TCCGGA	1 cut(s)	1486
AciI	CCGC	3 cut(s)	33, 292, 329
AclWI	GGATC	6 cut(s)	283, 540, 584, 1268, 1281, 1478
AcoI	YGGCCR	2 cut(s)	878, 1196
AcsI	RAATTY	3 cut(s)	554, 707, 1207
AcyI	GRCGYC	1 cut(s)	1091
AfaI	GTAC	1 cut(s)	838
AfiI	CCNNNNNNNGG	2 cut(s)	335, 1283
AhdI	GACNNNNNGTC	1 cut(s)	136
AjnI	CCWGG	2 cut(s)	180, 506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1270, 1302
AluBI	AGCT	9 cut(s)	440, 572, 604, 626, 1013, 1033, 1267, 1503, 1521
AluI	AGCT	9 cut(s)	440, 572, 604, 626, 1013, 1033, 1267, 1503, 1521
Alw26I	GTCTC	4 cut(s)	123, 1380, 1505, 1574
AlwI	GGATC	6 cut(s)	283, 540, 584, 1268, 1281, 1478
Aor13HI	TCCGGA	1 cut(s)	1486
AoxI	GGCC	5 cut(s)	878, 1196, 1230, 1399, 1464
ApaI	GGGCCC	1 cut(s)	1234
ApeKI	GCWGC	1 cut(s)	572
ApoI	RAATTY	3 cut(s)	554, 707, 1207
Asp700I	GAANNNNTTC	1 cut(s)	120
AspLEI	GCGC	1 cut(s)	1343
AspS9I	GGNCC	3 cut(s)	994, 1230, 1231
AsuHPI	GGTGA	4 cut(s)	49, 1344, 1396, 1457
AvaII	GGWCC	1 cut(s)	994
BaeGI	GKGCMC	1 cut(s)	1234
BalI	TGGCCA	1 cut(s)	880
BamHI	GGATCC	1 cut(s)	1273
BanII	GRGCYC	1 cut(s)	1234
BbsI	GAAGAC	1 cut(s)	163
BbvI	GCAGC	1 cut(s)	559
BccI	CCATC	2 cut(s)	644, 929
BceAI	ACGGC	1 cut(s)	650
BciT130I	CCWGG	2 cut(s)	182, 508
BciVI	GTATCC	1 cut(s)	1076
BclI	TGATCA	1 cut(s)	246
BcoDI	GTCTC	4 cut(s)	123, 1380, 1505, 1574
BfaI	CTAG	1 cut(s)	1223
BfmI	CTRYAG	2 cut(s)	1077, 1138
BfuI	GTATCC	1 cut(s)	1076
BglI	GCCNNNNNGGC	1 cut(s)	886
BisI	GCNGC	1 cut(s)	573
BlpI	GCTNAGC	2 cut(s)	76, 1029
BlsI	GCNGC	1 cut(s)	574
Bme1390I	CCNGG	2 cut(s)	182, 508
Bme18I	GGWCC	1 cut(s)	994
BmeRI	GACNNNNNGTC	1 cut(s)	136
BmgT120I	GGNCC	3 cut(s)	994, 1230, 1231
BmiI	GGNNCC	4 cut(s)	940, 995, 1232, 1275
BmrFI	CCNGG	2 cut(s)	182, 508
BpiI	GAAGAC	1 cut(s)	163
Bpu10I	CCTNAGC	1 cut(s)	863
Bpu1102I	GCTNAGC	2 cut(s)	76, 1029
BpuEI	CTTGAG	1 cut(s)	1362
BsaAI	YACGTR	1 cut(s)	836
BsaHI	GRCGYC	1 cut(s)	1091
BsaJI	CCNNGG	1 cut(s)	507
BsaWI	WCCGGW	1 cut(s)	1486
Bsc4I	CCNNNNNNNGG	2 cut(s)	335, 1283
Bse118I	RCCGGY	1 cut(s)	1354
Bse1I	ACTGG	3 cut(s)	547, 881, 1170
Bse3DI	GCAATG	2 cut(s)	70, 231
BseAI	TCCGGA	1 cut(s)	1486
BseBI	CCWGG	2 cut(s)	182, 508
BseDI	CCNNGG	1 cut(s)	507
BseGI	GGATG	2 cut(s)	655, 776
BseLI	CCNNNNNNNGG	2 cut(s)	335, 1283
BseMI	GCAATG	2 cut(s)	70, 231
BseMII	CTCAG	3 cut(s)	139, 512, 1086
BseNI	ACTGG	3 cut(s)	547, 881, 1170
BseRI	GAGGAG	2 cut(s)	36, 1523
BseSI	GKGCMC	1 cut(s)	1234
BseX3I	CGGCCG	1 cut(s)	1196
BseXI	GCAGC	1 cut(s)	559
BseYI	CCCAGC	1 cut(s)	305
BsgI	GTGCAG	2 cut(s)	392, 914
Bsh1236I	CGCG	1 cut(s)	331
Bsh1285I	CGRYCG	1 cut(s)	1199
BshFI	GGCC	5 cut(s)	880, 1198, 1232, 1401, 1466
BsiEI	CGRYCG	1 cut(s)	1199
BsiSI	CCGG	2 cut(s)	1355, 1487
BslFI	GGGAC	1 cut(s)	1007
BslI	CCNNNNNNNGG	2 cut(s)	335, 1283
BsmAI	GTCTC	4 cut(s)	123, 1380, 1505, 1574
BsmFI	GGGAC	1 cut(s)	1007
BsmI	GAATGC	1 cut(s)	468
BsnI	GGCC	5 cut(s)	880, 1198, 1232, 1401, 1466
Bsp120I	GGGCCC	1 cut(s)	1230
Bsp1286I	GDGCHC	1 cut(s)	1234
Bsp13I	TCCGGA	1 cut(s)	1486
Bsp143I	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
Bsp1720I	GCTNAGC	2 cut(s)	76, 1029
BspACI	CCGC	3 cut(s)	33, 292, 329
BspANI	GGCC	5 cut(s)	880, 1198, 1232, 1401, 1466
BspCNI	CTCAG	3 cut(s)	138, 513, 1087
BspEI	TCCGGA	1 cut(s)	1486
BspFNI	CGCG	1 cut(s)	331
BspHI	TCATGA	2 cut(s)	703, 1414
BspLI	GGNNCC	4 cut(s)	940, 995, 1232, 1275
BspPI	GGATC	6 cut(s)	283, 540, 584, 1268, 1281, 1478
BspQI	GCTCTTC	1 cut(s)	1035
BsrDI	GCAATG	2 cut(s)	70, 231
BsrFI	RCCGGY	1 cut(s)	1354
BsrI	ACTGG	3 cut(s)	547, 881, 1170
BssAI	RCCGGY	1 cut(s)	1354
BssECI	CCNNGG	1 cut(s)	507
BssMI	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
BssNAI	GTATAC	1 cut(s)	805
BssNI	GRCGYC	1 cut(s)	1091
Bst1107I	GTATAC	1 cut(s)	805
Bst2UI	CCWGG	2 cut(s)	182, 508
Bst4CI	ACNGT	5 cut(s)	97, 401, 765, 1142, 1577
Bst6I	CTCTTC	5 cut(s)	328, 458, 1035, 1299, 1558
BstACI	GRCGYC	1 cut(s)	1091
BstBAI	YACGTR	1 cut(s)	836
BstC8I	GCNNGC	1 cut(s)	1391
BstDEI	CTNAG	9 cut(s)	76, 125, 521, 863, 1005, 1029, 1095, 1313, 1361
BstF5I	GGATG	2 cut(s)	655, 776
BstFNI	CGCG	1 cut(s)	331
BstHHI	GCGC	1 cut(s)	1343
BstKTI	GATC	6 cut(s)	249, 291, 535, 592, 1276, 1486
BstMAI	GTCTC	4 cut(s)	123, 1380, 1505, 1574
BstMBI	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
BstMCI	CGRYCG	1 cut(s)	1199
BstMWI	GCNNNNNNNGC	3 cut(s)	886, 1010, 1527
BstNI	CCWGG	2 cut(s)	182, 508
BstNSI	RCATGY	1 cut(s)	1393
BstSCI	CCNGG	2 cut(s)	180, 506
BstSFI	CTRYAG	2 cut(s)	1077, 1138
BstSLI	GKGCMC	1 cut(s)	1234
BstUI	CGCG	1 cut(s)	331
BstV1I	GCAGC	1 cut(s)	559
BstV2I	GAAGAC	1 cut(s)	163
BstX2I	RGATCY	2 cut(s)	532, 1273
BstYI	RGATCY	2 cut(s)	532, 1273
BstZ17I	GTATAC	1 cut(s)	805
BstZI	CGGCCG	1 cut(s)	1196
BsuI	GTATCC	1 cut(s)	1076
BsuRI	GGCC	5 cut(s)	880, 1198, 1232, 1401, 1466
BtsCI	GGATG	2 cut(s)	655, 776
BtsIMutI	CAGTG	4 cut(s)	93, 305, 375, 1582
Cac8I	GCNNGC	1 cut(s)	1391
CciI	TCATGA	2 cut(s)	703, 1414
CfoI	GCGC	1 cut(s)	1343
Cfr10I	RCCGGY	1 cut(s)	1354
Cfr13I	GGNCC	3 cut(s)	994, 1230, 1231
CseI	GACGC	1 cut(s)	1080
Csp6I	GTAC	1 cut(s)	837
CviAII	CATG	6 cut(s)	704, 727, 814, 1087, 1390, 1415
CviQI	GTAC	1 cut(s)	837
DdeI	CTNAG	9 cut(s)	76, 125, 521, 863, 1005, 1029, 1095, 1313, 1361
DpnI	GATC	6 cut(s)	248, 290, 534, 591, 1275, 1485
DpnII	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
DraI	TTTAAA	1 cut(s)	553
DriI	GACNNNNNGTC	1 cut(s)	136
EaeI	YGGCCR	2 cut(s)	878, 1196
EagI	CGGCCG	1 cut(s)	1196
Eam1104I	CTCTTC	5 cut(s)	328, 458, 1035, 1299, 1558
Eam1105I	GACNNNNNGTC	1 cut(s)	136
EarI	CTCTTC	5 cut(s)	328, 458, 1035, 1299, 1558
EclXI	CGGCCG	1 cut(s)	1196
Eco147I	AGGCCT	1 cut(s)	1466
Eco24I	GRGCYC	1 cut(s)	1234
Eco32I	GATATC	1 cut(s)	964
Eco47I	GGWCC	1 cut(s)	994
Eco52I	CGGCCG	1 cut(s)	1196
EcoO109I	RGGNCCY	2 cut(s)	994, 1231
EcoRI	GAATTC	1 cut(s)	707
EcoRII	CCWGG	2 cut(s)	180, 506
EcoRV	GATATC	1 cut(s)	964
EcoT22I	ATGCAT	1 cut(s)	1105
EcoT38I	GRGCYC	1 cut(s)	1234
FaeI	CATG	6 cut(s)	707, 730, 817, 1090, 1393, 1418
FalI	AAGNNNNNCTT	2 cut(s)	1296, 1328
FaqI	GGGAC	1 cut(s)	1007
FatI	CATG	6 cut(s)	703, 726, 813, 1086, 1389, 1414
FbaI	TGATCA	1 cut(s)	246
FblI	GTMKAC	2 cut(s)	804, 1137
Fnu4HI	GCNGC	1 cut(s)	573
FokI	GGATG	2 cut(s)	662, 783
FriOI	GRGCYC	1 cut(s)	1234
Fsp4HI	GCNGC	1 cut(s)	573
FspBI	CTAG	1 cut(s)	1223
GlaI	GCGC	1 cut(s)	1342
GluI	GCNGC	1 cut(s)	573
GsaI	CCCAGC	1 cut(s)	309
HaeIII	GGCC	5 cut(s)	880, 1198, 1232, 1401, 1466
HapII	CCGG	2 cut(s)	1355, 1487
HgaI	GACGC	1 cut(s)	1080
HhaI	GCGC	1 cut(s)	1343
Hin1I	GRCGYC	1 cut(s)	1091
Hin1II	CATG	6 cut(s)	707, 730, 817, 1090, 1393, 1418
Hin6I	GCGC	1 cut(s)	1341
HinP1I	GCGC	1 cut(s)	1341
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HindIII	AAGCTT	2 cut(s)	602, 1519
HinfI	GANTC	5 cut(s)	280, 1478, 1513, 1535, 1582
HpaI	GTTAAC	1 cut(s)	235
HpaII	CCGG	2 cut(s)	1355, 1487
HphI	GGTGA	4 cut(s)	49, 1344, 1396, 1457
Hpy166II	GTNNAC	4 cut(s)	235, 631, 805, 1138
Hpy188I	TCNGA	8 cut(s)	128, 379, 494, 623, 853, 1096, 1483, 1534
Hpy188III	TCNNGA	5 cut(s)	457, 704, 1223, 1415, 1487
Hpy8I	GTNNAC	4 cut(s)	235, 631, 805, 1138
HpyAV	CCTTC	8 cut(s)	193, 458, 605, 776, 851, 1229, 1391, 1477
HpyCH4III	ACNGT	5 cut(s)	97, 401, 765, 1142, 1577
HpyCH4IV	ACGT	1 cut(s)	835
HpyF10VI	GCNNNNNNNGC	3 cut(s)	886, 1010, 1527
HpyF3I	CTNAG	9 cut(s)	76, 125, 521, 863, 1005, 1029, 1095, 1313, 1361
HpySE526I	ACGT	1 cut(s)	835
Hsp92I	GRCGYC	1 cut(s)	1091
Hsp92II	CATG	6 cut(s)	707, 730, 817, 1090, 1393, 1418
HspAI	GCGC	1 cut(s)	1341
Kpn2I	TCCGGA	1 cut(s)	1486
Ksp22I	TGATCA	1 cut(s)	246
KspAI	GTTAAC	1 cut(s)	235
Kzo9I	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
LguI	GCTCTTC	1 cut(s)	1035
LmnI	GCTCC	2 cut(s)	623, 1264
Lsp1109I	GCAGC	1 cut(s)	559
MaeI	CTAG	1 cut(s)	1223
MaeII	ACGT	1 cut(s)	835
MaeIII	GTNAC	1 cut(s)	1420
MalI	GATC	6 cut(s)	248, 290, 534, 591, 1275, 1485
MboI	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
MboII	GAAGA	9 cut(s)	168, 345, 445, 524, 527, 672, 1052, 1316, 1545
MflI	RGATCY	2 cut(s)	532, 1273
MhlI	GDGCHC	1 cut(s)	1234
MlsI	TGGCCA	1 cut(s)	880
MluNI	TGGCCA	1 cut(s)	880
MlyI	GAGTC	4 cut(s)	274, 1472, 1507, 1576
MmeI	TCCRAC	1 cut(s)	133
Mox20I	TGGCCA	1 cut(s)	880
Mph1103I	ATGCAT	1 cut(s)	1105
MroI	TCCGGA	1 cut(s)	1486
MroXI	GAANNNNTTC	1 cut(s)	120
MscI	TGGCCA	1 cut(s)	880
MslI	CAYNNNNRTG	1 cut(s)	368
Msp20I	TGGCCA	1 cut(s)	880
MspI	CCGG	2 cut(s)	1355, 1487
MspR9I	CCNGG	2 cut(s)	182, 508
Mva1269I	GAATGC	1 cut(s)	468
MvaI	CCWGG	2 cut(s)	182, 508
MvnI	CGCG	1 cut(s)	331
MwoI	GCNNNNNNNGC	3 cut(s)	886, 1010, 1527
NdeII	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
NlaIII	CATG	6 cut(s)	707, 730, 817, 1090, 1393, 1418
NlaIV	GGNNCC	4 cut(s)	940, 995, 1232, 1275
NmuCI	GTSAC	1 cut(s)	1420
NsiI	ATGCAT	1 cut(s)	1105
NspI	RCATGY	1 cut(s)	1393
PaeI	GCATGC	1 cut(s)	1393
PagI	TCATGA	2 cut(s)	703, 1414
PceI	AGGCCT	1 cut(s)	1466
PciSI	GCTCTTC	1 cut(s)	1035
PctI	GAATGC	1 cut(s)	468
PdmI	GAANNNNTTC	1 cut(s)	120
PfeI	GAWTC	1 cut(s)	1535
PfoI	TCCNGGA	1 cut(s)	180
PkrI	GCNGC	1 cut(s)	574
PleI	GAGTC	4 cut(s)	274, 1472, 1507, 1576
PpsI	GAGTC	4 cut(s)	274, 1472, 1507, 1576
Ppu21I	YACGTR	1 cut(s)	836
PpuMI	RGGWCCY	1 cut(s)	994
Psp5II	RGGWCCY	1 cut(s)	994
Psp6I	CCWGG	2 cut(s)	180, 506
PspFI	CCCAGC	1 cut(s)	305
PspGI	CCWGG	2 cut(s)	180, 506
PspN4I	GGNNCC	4 cut(s)	940, 995, 1232, 1275
PspOMI	GGGCCC	1 cut(s)	1230
PspPI	GGNCC	3 cut(s)	994, 1230, 1231
PspPPI	RGGWCCY	1 cut(s)	994
PsuI	RGATCY	2 cut(s)	532, 1273
RsaI	GTAC	1 cut(s)	838
RsaNI	GTAC	1 cut(s)	837
RseI	CAYNNNNRTG	1 cut(s)	368
SapI	GCTCTTC	1 cut(s)	1035
SatI	GCNGC	1 cut(s)	573
Sau3AI	GATC	6 cut(s)	246, 288, 532, 589, 1273, 1483
Sau96I	GGNCC	3 cut(s)	994, 1230, 1231
SchI	GAGTC	4 cut(s)	274, 1472, 1507, 1576
ScrFI	CCNGG	2 cut(s)	182, 508
SduI	GDGCHC	1 cut(s)	1234
SfcI	CTRYAG	2 cut(s)	1077, 1138
SinI	GGWCC	1 cut(s)	994
SmiMI	CAYNNNNRTG	1 cut(s)	368
SmlI	CTYRAG	1 cut(s)	1377
SmoI	CTYRAG	1 cut(s)	1377
SphI	GCATGC	1 cut(s)	1393
SseBI	AGGCCT	1 cut(s)	1466
SsiI	CCGC	3 cut(s)	33, 292, 329
SspI	AATATT	1 cut(s)	1567
SspMI	CTAG	1 cut(s)	1223
StuI	AGGCCT	1 cut(s)	1466
StyD4I	CCNGG	2 cut(s)	180, 506
TaaI	ACNGT	5 cut(s)	97, 401, 765, 1142, 1577
TaiI	ACGT	1 cut(s)	838
TaqI	TCGA	3 cut(s)	689, 1516, 1585
TfiI	GAWTC	1 cut(s)	1535
TscAI	CASTG	4 cut(s)	100, 305, 375, 1582
TseFI	GTSAC	1 cut(s)	1420
TseI	GCWGC	1 cut(s)	572
Tsp45I	GTSAC	1 cut(s)	1420
TspDTI	ATGAA	9 cut(s)	700, 720, 732, 944, 1338, 1403, 1431, 1464, 1513
TspGWI	ACGGA	1 cut(s)	794
TspRI	CASTG	4 cut(s)	100, 305, 375, 1582
VpaK11BI	GGWCC	1 cut(s)	994
XapI	RAATTY	3 cut(s)	554, 707, 1207
XbaI	TCTAGA	1 cut(s)	1222
XceI	RCATGY	1 cut(s)	1393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	982
XmiI	GTMKAC	2 cut(s)	804, 1137
XmnI	GAANNNNTTC	1 cut(s)	120
XspI	CTAG	1 cut(s)	1223
Zsp2I	ATGCAT	1 cut(s)	1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.