Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

86165281 .. 86171803

Gene Structure 6523 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGTAAGAATTTACAACCCAGAGGAGATGGTCATCTTCTTCGTAGTGGTCATTTGCATGGCACAAGTCATATTTGAAGCACAGGCCATGACTCTTCCAGCTGACGAGGTGCAAGCCCTTCATGAAATTGCTGAGCAACTGAACAAAAAGGACTGGAATTTGAGCGACCCATGTAGAAATATTCCAACTTTCTCAATCCCACATACGGATCAGTACATGAACACCCTCCTCTGCAACTGTTCTTTCTCTGGCAATGTGTGCCATGTCCAAACCATTTTTCTTGTGGGTCAGGACCTGGATGGTGTGCTTCCACCATCACTGGTGAAGCTGCCTTACCTCAAGGAACTTAATCTGGGTCAGAATTGCCTTAGTGGCTCAATTCCACCAGAATGGGGCTCTACCAAGTTGGAATTTCTGGTTCTCAGTGTGAACAACTTATCAGGACCTATCCCTGCCTATTTGGGAAACATAACTACTCTCCGAGCTTTGGCCTTGGAAAGCAACTTATTTTCTGGAAGTATTCCACCGGAGATGGGAAGATTGATTAACATGGAAGTCCTAGTAATCAGTGACTTAAGCGGAGAGAGCTCAAGTTTTCCAAACTTGTCGAACATGAAAAACATGCAGAAATTATATCTGACAAGTAACTGGCTTACTGGGCTTCCGGAGTGGATCAAAAATAGAGACAGCCGCTACATAATAGATCTTTCTTACAACAATTTTTCAAGGGACTCTGTCCCAACTACATGTCGAGAAACCTTTAATGTGTTCAAAAGTTTCTCCAGACAGAACAACTCAATTCTTTGCGATTGCCTCTATCCATGTTCAAAAGAACAGTATTCATTGCATATTAATTGTGGTGGAAAACCAACCACCATTGGAAGCATCAAGTACGAGGGGGATGAAGCCTCGGGAGGTGGAGCAAAGTTATTTCGGGACCCAGTTAATTGGGGATTTAGTAGCACTGGTGATTATGGGATTATGAATTTTGACCAAGCCTACATAGCAAACAATGTTTCCATACTCAAAATGAACAACTCGGAATTGTACAGAACTGCCCGCCTTTCTTTTCTTTCACTCACATATTATGCTCGTTGCTTAGCGAATGGAAATTACACTGTGAAACTACACTTTGCAGAAATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGATTTTTTGATGTCTATATTCAGGAAAAACTGGTATTGAAGGATTTTAATATTGAAAAGGAAGCACAAGGGGTTGATAAGGAAGTGATTAAAGTATTTAAAGCAGTTGTCAATGTTAGCACTTTAGAGATCCGTTTTTATTGGGCTGGGAAAGGGACAACTAATGCCCCGAAGAGAGGGACATATGGTTCACTTATATCGGCTATCTCAGTTGAGTCTGATTTTAAGCCGCCTGGTGATAGCAACAGGAAAATATTCATAGCGGTTGGAGTTGCTTTATTCTTATGCCTTATCTTCATGGTTTTTAGCATTCTTTGGTTAAGAAGCTGCTTTGGAGGCAGGACCTCTAGGGAACAAGAGCTGAAAGGATTGGATCTGCAAACTGGACTCTTTAGATTCAAACAAATCAAAGCTGCCACTAACAACTTTGATGCCGCAAACAAGCTTGGGGAAGGTGGCTTTGGAATTGTTTACAAGGGGGAATTATTAGATGGTACTACTATTGCTGTTAAGCAACTTTCATCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAATGAAATAGGGATGATTTTTGGTTTGCAACATCCAAATCTTGTTAGATTGTATGGATGTTGCATCGAAGGAAATCAGTTGTTGCTGGTATATGAATACATGGAGAACAATAGTCTTGCACATTCATTGTTTGGTCCACAAGAAGGTATACTGAAACTGGACTGGCCTAAGAGGCAAAAAATATGTATTGGCATTGCAAGAGGGCTAGCTTTCCTGCATGAGGAATCGACACTGAAAATTGTTCATAGAGACATCAAAATGACTAATATACTGCTAGATAGGGACCTAAATCCTAAAATCTCTGACTTTGGTTTGGCCAAGCTAGACGAAGAGGAGAAGACGCATATTAGCACCAGAGTAGCTGGAACTATAGGATACATGGCGCCAGAATATGCACTATGGGGTTATTTAACTGACAAAGTAGATGTTTACAGTTTTGGAGTTGTTGCATTAGAGCTCGTATCTGGCAAAAACAACATCAAATATCGACCAAATGAGAATTATGTATGCCTTCTAGATTGGGCCCTTGTTTTGCAACAAAAAGAAAACCTGATGGAGCTAGTGGATCCAAAGTTGGGATCCAAGTTCAACAAGGAAGAGGCAATGAGAATGATTAAAGTAGCTCTACTATGCACCAATCCATCACCAGCACTGAGACCTACAATGTCTGCAGCACTAAGCATGCTTGAAGGCCGAGCTGCTATTCATGAATCAAGTAGAAATCTGAGTATGTATGGTGATGAACTGGGGTTTAAGGCCCTAAGAGACGACTATAATGATCTGAATATTCAACAGAGCCCAAGAGAGACTCAGAGCCTCATTTATTCATCCGATGCCAAAGGGGCAGATGCCTCTTCCTCAACGACCGTCCAGGATAGCTATACATTTAATCTTGATTCTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

880

Amino Acids

98.56

Weight (kDa)

6.22

Isoelectric Point (pI)

36.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	281 - 463	5.6e-36	Malectin domain
Pkinase	PF00069	539 - 806	1.5e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	540 - 804	4.6e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2119
AccI	GTMKAC	1 cut(s)	1885
AccIII	TCCGGA	1 cut(s)	664
AciI	CCGC	6 cut(s)	579, 691, 1060, 1412, 1445, 1617
AclWI	GGATC	8 cut(s)	216, 680, 1306, 1563, 2297, 2310, 2310, 2323
AcoI	YGGCCR	1 cut(s)	2052
AcsI	RAATTY	4 cut(s)	9, 157, 410, 985
AcyI	GRCGYC	1 cut(s)	2120
AfaI	GTAC	4 cut(s)	215, 893, 1049, 1678
AfiI	CCNNNNNNNGG	8 cut(s)	205, 392, 487, 533, 1358, 1880, 1957, 2312
AflII	CTTAAG	1 cut(s)	574
AflIII	ACRYGT	1 cut(s)	746
AhdI	GACNNNNNGTC	1 cut(s)	1159
AjnI	CCWGG	3 cut(s)	294, 1414, 2607
AjuI	GAANNNNNNNTTGG	4 cut(s)	261, 293, 1626, 1658
AloI	GAACNNNNNNTCC	2 cut(s)	1354, 1386
Alw21I	GWGCWC	2 cut(s)	590, 2196
Alw26I	GTCTC	6 cut(s)	678, 1146, 1980, 2386, 2496, 2537
AlwI	GGATC	8 cut(s)	216, 680, 1306, 1563, 2297, 2310, 2310, 2323
AlwNI	CAGNNNCTG	1 cut(s)	295
Ama87I	CYCGRG	1 cut(s)	910
Aor13HI	TCCGGA	1 cut(s)	664
AoxI	GGCC	7 cut(s)	84, 489, 1901, 2052, 2259, 2428, 2493
ApaI	GGGCCC	1 cut(s)	2263
ApeKI	GCWGC	5 cut(s)	328, 1509, 1595, 2408, 2435
ApoI	RAATTY	4 cut(s)	9, 157, 410, 985
AseI	ATTAAT	1 cut(s)	852
Asp700I	GAANNNNTTC	2 cut(s)	1143, 1436
AspLEI	GCGC	1 cut(s)	2122
AspS9I	GGNCC	9 cut(s)	292, 443, 937, 1524, 1871, 2020, 2259, 2260, 2494
AsuHPI	GGTGA	5 cut(s)	334, 980, 1430, 2373, 2486
AsuNHI	GCTAGC	1 cut(s)	1942
AvaI	CYCGRG	1 cut(s)	910
AvaII	GGWCC	6 cut(s)	292, 443, 937, 1524, 1871, 2020
BaeGI	GKGCMC	1 cut(s)	2263
BalI	TGGCCA	1 cut(s)	2054
BamHI	GGATCC	2 cut(s)	2302, 2315
BanI	GGYRCC	1 cut(s)	2119
BanII	GRGCYC	5 cut(s)	398, 590, 2196, 2263, 2537
BarI	GAAGNNNNNNTAC	2 cut(s)	317, 349
BbsI	GAAGAC	2 cut(s)	1186, 2081
Bbv12I	GWGCWC	2 cut(s)	590, 2196
BbvI	GCAGC	5 cut(s)	315, 1496, 1582, 2420, 2422
BccI	CCATC	7 cut(s)	22, 293, 322, 526, 1667, 2284, 2386
BciT130I	CCWGG	3 cut(s)	296, 1416, 2609
BciVI	GTATCC	1 cut(s)	2105
BcoDI	GTCTC	6 cut(s)	678, 1146, 1980, 2386, 2496, 2537
BfaI	CTAG	7 cut(s)	560, 1530, 1943, 2012, 2060, 2252, 2297
BfmI	CTRYAG	2 cut(s)	2106, 2406
BfoI	RGCGCY	1 cut(s)	2123
BfrI	CTTAAG	1 cut(s)	574
BfuI	GTATCC	1 cut(s)	2105
BglI	GCCNNNNNGGC	3 cut(s)	372, 1909, 2579
BglII	AGATCT	1 cut(s)	703
BisI	GCNGC	8 cut(s)	329, 691, 1412, 1510, 1596, 1617, 2409, 2436
BlpI	GCTNAGC	2 cut(s)	132, 1099
BlsI	GCNGC	8 cut(s)	330, 692, 1413, 1511, 1597, 1618, 2410, 2437
Bme1390I	CCNGG	3 cut(s)	296, 1416, 2609
Bme18I	GGWCC	6 cut(s)	292, 443, 937, 1524, 1871, 2020
BmeRI	GACNNNNNGTC	1 cut(s)	1159
BmeT110I	CYCGRG	1 cut(s)	910
BmgT120I	GGNCC	9 cut(s)	292, 443, 937, 1524, 1871, 2020, 2259, 2260, 2494
BmiI	GGNNCC	7 cut(s)	938, 939, 2021, 2121, 2261, 2304, 2317
BmrFI	CCNGG	3 cut(s)	296, 1416, 2609
BmrI	ACTGGG	3 cut(s)	666, 935, 2492
BmsI	GCATC	5 cut(s)	894, 1603, 1809, 2560, 2575
BmtI	GCTAGC	1 cut(s)	1946
BmuI	ACTGGG	3 cut(s)	666, 935, 2492
BpiI	GAAGAC	2 cut(s)	1186, 2081
BpmI	CTGGAG	1 cut(s)	766
Bpu1102I	GCTNAGC	2 cut(s)	132, 1099
BpuEI	CTTGAG	2 cut(s)	323, 574
BsaBI	GATNNNNATC	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	2120
BsaI	GGTCTC	1 cut(s)	2386
BsaJI	CCNNGG	2 cut(s)	492, 909
BsaWI	WCCGGW	2 cut(s)	526, 664
Bsc4I	CCNNNNNNNGG	8 cut(s)	205, 392, 487, 533, 1358, 1880, 1957, 2312
Bse3DI	GCAATG	4 cut(s)	259, 842, 1929, 2346
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	1 cut(s)	664
BseBI	CCWGG	3 cut(s)	296, 1416, 2609
BseDI	CCNNGG	2 cut(s)	492, 909
BseGI	GGATG	6 cut(s)	304, 907, 1755, 1768, 1799, 2564
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	8 cut(s)	205, 392, 487, 533, 1358, 1880, 1957, 2312
BseMI	GCAATG	4 cut(s)	259, 842, 1929, 2346
BseMII	CTCAG	7 cut(s)	123, 436, 1162, 1404, 2381, 2453, 2561
BseRI	GAGGAG	3 cut(s)	38, 218, 2084
BseSI	GKGCMC	1 cut(s)	2263
BseXI	GCAGC	5 cut(s)	315, 1496, 1582, 2420, 2422
BseYI	CCCAGC	1 cut(s)	1328
Bsh1285I	CGRYCG	1 cut(s)	2604
BshFI	GGCC	7 cut(s)	86, 491, 1903, 2054, 2261, 2430, 2495
BshNI	GGYRCC	1 cut(s)	2119
BsiEI	CGRYCG	1 cut(s)	2604
BsiHKAI	GWGCWC	2 cut(s)	590, 2196
BsiHKCI	CYCGRG	1 cut(s)	910
BsiSI	CCGG	2 cut(s)	527, 665
BslFI	GGGAC	6 cut(s)	722, 743, 950, 1351, 1375, 2033
BslI	CCNNNNNNNGG	8 cut(s)	205, 392, 487, 533, 1358, 1880, 1957, 2312
BsmAI	GTCTC	6 cut(s)	678, 1146, 1980, 2386, 2496, 2537
BsmBI	CGTCTC	1 cut(s)	2496
BsmFI	GGGAC	6 cut(s)	722, 743, 950, 1351, 1375, 2033
BsmI	GAATGC	1 cut(s)	1491
BsnI	GGCC	7 cut(s)	86, 491, 1903, 2054, 2261, 2430, 2495
Bso31I	GGTCTC	1 cut(s)	2386
BsoBI	CYCGRG	1 cut(s)	910
Bsp120I	GGGCCC	1 cut(s)	2259
Bsp1286I	GDGCHC	5 cut(s)	398, 590, 2196, 2263, 2537
Bsp13I	TCCGGA	1 cut(s)	664
Bsp1407I	TGTACA	1 cut(s)	1047
Bsp143I	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
Bsp1720I	GCTNAGC	2 cut(s)	132, 1099
BspACI	CCGC	6 cut(s)	579, 691, 1060, 1412, 1445, 1617
BspANI	GGCC	7 cut(s)	86, 491, 1903, 2054, 2261, 2430, 2495
BspCNI	CTCAG	7 cut(s)	124, 435, 1161, 1403, 2382, 2454, 2560
BspEI	TCCGGA	1 cut(s)	664
BspHI	TCATGA	2 cut(s)	121, 2443
BspLI	GGNNCC	7 cut(s)	938, 939, 2021, 2121, 2261, 2304, 2317
BspMAI	CTGCAG	1 cut(s)	2410
BspOI	GCTAGC	1 cut(s)	1946
BspPI	GGATC	8 cut(s)	216, 680, 1306, 1563, 2297, 2310, 2310, 2323
BspT107I	GGYRCC	1 cut(s)	2119
BspTI	CTTAAG	1 cut(s)	574
BspTNI	GGTCTC	1 cut(s)	2386
BsrDI	GCAATG	4 cut(s)	259, 842, 1929, 2346
BsrGI	TGTACA	1 cut(s)	1047
BssECI	CCNNGG	2 cut(s)	492, 909
BssMI	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
BssNAI	GTATAC	1 cut(s)	1886
BssNI	GRCGYC	1 cut(s)	2120
BssT1I	CCWWGG	1 cut(s)	492
Bst1107I	GTATAC	1 cut(s)	1886
Bst2UI	CCWGG	3 cut(s)	296, 1416, 2609
Bst4CI	ACNGT	5 cut(s)	239, 837, 1120, 2171, 2605
Bst6I	CTCTTC	5 cut(s)	99, 1349, 2061, 2328, 2596
BstACI	GRCGYC	1 cut(s)	2120
BstAFI	CTTAAG	1 cut(s)	574
BstAPI	GCANNNNNTGC	1 cut(s)	258
BstAUI	TGTACA	1 cut(s)	1047
BstC8I	GCNNGC	4 cut(s)	114, 1060, 1944, 2420
BstENI	CCTNNNNNAGG	1 cut(s)	1955
BstF5I	GGATG	6 cut(s)	304, 907, 1755, 1768, 1799, 2564
BstH2I	RGCGCY	1 cut(s)	2123
BstHHI	GCGC	1 cut(s)	2122
BstKTI	GATC	8 cut(s)	211, 675, 706, 1314, 1558, 2305, 2318, 2518
BstMAI	GTCTC	6 cut(s)	678, 1146, 1980, 2386, 2496, 2537
BstMBI	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
BstMCI	CGRYCG	1 cut(s)	2604
BstMWI	GCNNNNNNNGC	8 cut(s)	258, 372, 585, 658, 1004, 1518, 1909, 2579
BstNI	CCWGG	3 cut(s)	296, 1416, 2609
BstNSI	RCATGY	3 cut(s)	625, 750, 2422
BstSCI	CCNGG	3 cut(s)	294, 1414, 2607
BstSFI	CTRYAG	2 cut(s)	2106, 2406
BstSLI	GKGCMC	1 cut(s)	2263
BstV1I	GCAGC	5 cut(s)	315, 1496, 1582, 2420, 2422
BstV2I	GAAGAC	2 cut(s)	1186, 2081
BstX2I	RGATCY	5 cut(s)	703, 1311, 1555, 2302, 2315
BstXI	CCANNNNNNTGG	2 cut(s)	390, 948
BstYI	RGATCY	5 cut(s)	703, 1311, 1555, 2302, 2315
BstZ17I	GTATAC	1 cut(s)	1886
BsuI	GTATCC	1 cut(s)	2105
BsuRI	GGCC	7 cut(s)	86, 491, 1903, 2054, 2261, 2430, 2495
BtsCI	GGATG	6 cut(s)	304, 907, 1755, 1768, 1799, 2564
BtsIMutI	CAGTG	7 cut(s)	317, 430, 574, 963, 1116, 1967, 2387
Cac8I	GCNNGC	4 cut(s)	114, 1060, 1944, 2420
CaiI	CAGNNNCTG	1 cut(s)	295
CciI	TCATGA	2 cut(s)	121, 2443
CfoI	GCGC	1 cut(s)	2122
Cfr13I	GGNCC	9 cut(s)	292, 443, 937, 1524, 1871, 2020, 2259, 2260, 2494
CseI	GACGC	1 cut(s)	2086
Csp6I	GTAC	4 cut(s)	214, 892, 1048, 1677
CviQI	GTAC	4 cut(s)	214, 892, 1048, 1677
DinI	GGCGCC	1 cut(s)	2121
DpnI	GATC	8 cut(s)	210, 674, 705, 1313, 1557, 2304, 2317, 2517
DpnII	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
DraI	TTTAAA	1 cut(s)	1282
DriI	GACNNNNNGTC	1 cut(s)	1159
EaeI	YGGCCR	1 cut(s)	2052
Eam1104I	CTCTTC	5 cut(s)	99, 1349, 2061, 2328, 2596
Eam1105I	GACNNNNNGTC	1 cut(s)	1159
EarI	CTCTTC	5 cut(s)	99, 1349, 2061, 2328, 2596
Ecl136II	GAGCTC	2 cut(s)	588, 2194
Eco130I	CCWWGG	1 cut(s)	492
Eco24I	GRGCYC	5 cut(s)	398, 590, 2196, 2263, 2537
Eco31I	GGTCTC	1 cut(s)	2386
Eco47I	GGWCC	6 cut(s)	292, 443, 937, 1524, 1871, 2020
Eco53kI	GAGCTC	2 cut(s)	588, 2194
Eco88I	CYCGRG	1 cut(s)	910
EcoICRI	GAGCTC	2 cut(s)	588, 2194
EcoNI	CCTNNNNNAGG	1 cut(s)	1955
EcoO109I	RGGNCCY	7 cut(s)	292, 443, 937, 1524, 2020, 2260, 2494
EcoRII	CCWGG	3 cut(s)	294, 1414, 2607
EcoT14I	CCWWGG	1 cut(s)	492
EcoT38I	GRGCYC	5 cut(s)	398, 590, 2196, 2263, 2537
EgeI	GGCGCC	1 cut(s)	2121
EheI	GGCGCC	1 cut(s)	2121
ErhI	CCWWGG	1 cut(s)	492
Esp3I	CGTCTC	1 cut(s)	2496
FaqI	GGGAC	6 cut(s)	722, 743, 950, 1351, 1375, 2033
FauI	CCCGC	1 cut(s)	1067
FauNDI	CATATG	1 cut(s)	1366
FblI	GTMKAC	1 cut(s)	1885
Fnu4HI	GCNGC	8 cut(s)	329, 691, 1412, 1510, 1596, 1617, 2409, 2436
FokI	GGATG	6 cut(s)	311, 914, 1755, 1762, 1806, 2551
FriOI	GRGCYC	5 cut(s)	398, 590, 2196, 2263, 2537
Fsp4HI	GCNGC	8 cut(s)	329, 691, 1412, 1510, 1596, 1617, 2409, 2436
FspBI	CTAG	7 cut(s)	560, 1530, 1943, 2012, 2060, 2252, 2297
GlaI	GCGC	1 cut(s)	2121
GluI	GCNGC	8 cut(s)	329, 691, 1412, 1510, 1596, 1617, 2409, 2436
GsaI	CCCAGC	1 cut(s)	1332
GsuI	CTGGAG	1 cut(s)	766
HaeII	RGCGCY	1 cut(s)	2123
HaeIII	GGCC	7 cut(s)	86, 491, 1903, 2054, 2261, 2430, 2495
HapII	CCGG	2 cut(s)	527, 665
HgaI	GACGC	1 cut(s)	2086
HhaI	GCGC	1 cut(s)	2122
Hin1I	GRCGYC	1 cut(s)	2120
Hin6I	GCGC	1 cut(s)	2120
HinP1I	GCGC	1 cut(s)	2120
HindIII	AAGCTT	1 cut(s)	1625
HinfI	GANTC	9 cut(s)	91, 731, 1397, 1569, 1578, 1961, 2447, 2545, 2633
HpaII	CCGG	2 cut(s)	527, 665
HphI	GGTGA	5 cut(s)	334, 980, 1430, 2373, 2486
Hpy166II	GTNNAC	6 cut(s)	430, 1373, 1654, 1874, 1886, 2167
Hpy8I	GTNNAC	6 cut(s)	430, 1373, 1654, 1874, 1886, 2167
HpyAV	CCTTC	7 cut(s)	128, 1216, 1628, 1799, 1874, 2258, 2420
HpyCH4III	ACNGT	5 cut(s)	239, 837, 1120, 2171, 2605
HpyF10VI	GCNNNNNNNGC	8 cut(s)	258, 372, 585, 658, 1004, 1518, 1909, 2579
Hsp92I	GRCGYC	1 cut(s)	2120
HspAI	GCGC	1 cut(s)	2120
KasI	GGCGCC	1 cut(s)	2119
KflI	GGGWCCC	1 cut(s)	937
Kpn2I	TCCGGA	1 cut(s)	664
Kzo9I	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
LmnI	GCTCC	2 cut(s)	920, 2293
Lsp1109I	GCAGC	5 cut(s)	315, 1496, 1582, 2420, 2422
LweI	GCATC	5 cut(s)	894, 1603, 1809, 2560, 2575
MaeI	CTAG	7 cut(s)	560, 1530, 1943, 2012, 2060, 2252, 2297
MaeIII	GTNAC	2 cut(s)	569, 644
MalI	GATC	8 cut(s)	210, 674, 705, 1313, 1557, 2304, 2317, 2517
MboI	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
MflI	RGATCY	5 cut(s)	703, 1311, 1555, 2302, 2315
MhlI	GDGCHC	5 cut(s)	398, 590, 2196, 2263, 2537
MlsI	TGGCCA	1 cut(s)	2054
MluNI	TGGCCA	1 cut(s)	2054
Mly113I	GGCGCC	1 cut(s)	2120
MlyI	GAGTC	5 cut(s)	85, 725, 1406, 1563, 2539
MmeI	TCCRAC	4 cut(s)	209, 387, 1156, 1429
Mox20I	TGGCCA	1 cut(s)	2054
MroI	TCCGGA	1 cut(s)	664
MroXI	GAANNNNTTC	2 cut(s)	1143, 1436
MscI	TGGCCA	1 cut(s)	2054
MslI	CAYNNNNRTG	3 cut(s)	56, 388, 1994
Msp20I	TGGCCA	1 cut(s)	2054
MspA1I	CMGCKG	1 cut(s)	101
MspCI	CTTAAG	1 cut(s)	574
MspI	CCGG	2 cut(s)	527, 665
MspR9I	CCNGG	3 cut(s)	296, 1416, 2609
Mva1269I	GAATGC	1 cut(s)	1491
MvaI	CCWGG	3 cut(s)	296, 1416, 2609
MwoI	GCNNNNNNNGC	8 cut(s)	258, 372, 585, 658, 1004, 1518, 1909, 2579
NarI	GGCGCC	1 cut(s)	2120
NdeI	CATATG	1 cut(s)	1366
NdeII	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
NheI	GCTAGC	1 cut(s)	1942
NlaIV	GGNNCC	7 cut(s)	938, 939, 2021, 2121, 2261, 2304, 2317
NmeAIII	GCCGAG	1 cut(s)	2456
NmuCI	GTSAC	1 cut(s)	569
NspI	RCATGY	3 cut(s)	625, 750, 2422
PaeI	GCATGC	1 cut(s)	2422
PagI	TCATGA	2 cut(s)	121, 2443
PciI	ACATGT	1 cut(s)	746
PctI	GAATGC	1 cut(s)	1491
PdmI	GAANNNNTTC	2 cut(s)	1143, 1436
PfeI	GAWTC	4 cut(s)	1578, 1961, 2447, 2633
PflFI	GACNNNGTC	1 cut(s)	734
PfoI	TCCNGGA	1 cut(s)	2607
PkrI	GCNGC	8 cut(s)	330, 692, 1413, 1511, 1597, 1618, 2410, 2437
PleI	GAGTC	5 cut(s)	85, 725, 1405, 1563, 2539
PluTI	GGCGCC	1 cut(s)	2123
PpsI	GAGTC	5 cut(s)	85, 725, 1405, 1563, 2539
PpuMI	RGGWCCY	5 cut(s)	292, 443, 937, 1524, 2020
PscI	ACATGT	1 cut(s)	746
PshBI	ATTAAT	1 cut(s)	852
Psp124BI	GAGCTC	2 cut(s)	590, 2196
Psp5II	RGGWCCY	5 cut(s)	292, 443, 937, 1524, 2020
Psp6I	CCWGG	3 cut(s)	294, 1414, 2607
PspFI	CCCAGC	1 cut(s)	1328
PspGI	CCWGG	3 cut(s)	294, 1414, 2607
PspN4I	GGNNCC	7 cut(s)	938, 939, 2021, 2121, 2261, 2304, 2317
PspOMI	GGGCCC	1 cut(s)	2259
PspPI	GGNCC	9 cut(s)	292, 443, 937, 1524, 1871, 2020, 2259, 2260, 2494
PspPPI	RGGWCCY	5 cut(s)	292, 443, 937, 1524, 2020
PstI	CTGCAG	1 cut(s)	2410
PstNI	CAGNNNCTG	1 cut(s)	295
PsuI	RGATCY	5 cut(s)	703, 1311, 1555, 2302, 2315
PsyI	GACNNNGTC	1 cut(s)	734
PvuII	CAGCTG	1 cut(s)	101
RsaI	GTAC	4 cut(s)	215, 893, 1049, 1678
RsaNI	GTAC	4 cut(s)	214, 892, 1048, 1677
RseI	CAYNNNNRTG	3 cut(s)	56, 388, 1994
SacI	GAGCTC	2 cut(s)	590, 2196
SatI	GCNGC	8 cut(s)	329, 691, 1412, 1510, 1596, 1617, 2409, 2436
Sau3AI	GATC	8 cut(s)	208, 672, 703, 1311, 1555, 2302, 2315, 2515
Sau96I	GGNCC	9 cut(s)	292, 443, 937, 1524, 1871, 2020, 2259, 2260, 2494
SchI	GAGTC	5 cut(s)	85, 725, 1406, 1563, 2539
ScrFI	CCNGG	3 cut(s)	296, 1416, 2609
SduI	GDGCHC	5 cut(s)	398, 590, 2196, 2263, 2537
SfaNI	GCATC	5 cut(s)	894, 1603, 1809, 2560, 2575
SfcI	CTRYAG	2 cut(s)	2106, 2406
SfoI	GGCGCC	1 cut(s)	2121
SinI	GGWCC	6 cut(s)	292, 443, 937, 1524, 1871, 2020
SmiMI	CAYNNNNRTG	3 cut(s)	56, 388, 1994
SmlI	CTYRAG	3 cut(s)	338, 574, 589
SmoI	CTYRAG	3 cut(s)	338, 574, 589
SphI	GCATGC	1 cut(s)	2422
SsiI	CCGC	6 cut(s)	579, 691, 1060, 1412, 1445, 1617
SspDI	GGCGCC	1 cut(s)	2119
SspI	AATATT	4 cut(s)	181, 1234, 1437, 2524
SspMI	CTAG	7 cut(s)	560, 1530, 1943, 2012, 2060, 2252, 2297
SstI	GAGCTC	2 cut(s)	590, 2196
StyD4I	CCNGG	3 cut(s)	294, 1414, 2607
StyI	CCWWGG	1 cut(s)	492
TaaI	ACNGT	5 cut(s)	239, 837, 1120, 2171, 2605
TaqI	TCGA	5 cut(s)	608, 751, 1803, 1964, 2224
TatI	WGTACW	2 cut(s)	213, 1047
TauI	GCSGC	3 cut(s)	693, 1414, 1619
TfiI	GAWTC	4 cut(s)	1578, 1961, 2447, 2633
TscAI	CASTG	7 cut(s)	324, 430, 574, 970, 1123, 1974, 2394
TseFI	GTSAC	1 cut(s)	569
TseI	GCWGC	5 cut(s)	328, 1509, 1595, 2408, 2435
Tsp45I	GTSAC	1 cut(s)	569
TspGWI	ACGGA	2 cut(s)	221, 1304
TspRI	CASTG	7 cut(s)	324, 430, 574, 970, 1123, 1974, 2394
Tth111I	GACNNNGTC	1 cut(s)	734
Vha464I	CTTAAG	1 cut(s)	574
VpaK11BI	GGWCC	6 cut(s)	292, 443, 937, 1524, 1871, 2020
VspI	ATTAAT	1 cut(s)	852
XagI	CCTNNNNNAGG	1 cut(s)	1955
XapI	RAATTY	4 cut(s)	9, 157, 410, 985
XbaI	TCTAGA	1 cut(s)	2251
XceI	RCATGY	3 cut(s)	625, 750, 2422
XcmI	CCANNNNNNNNNTGG	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	1885
XmnI	GAANNNNTTC	2 cut(s)	1143, 1436
XspI	CTAG	7 cut(s)	560, 1530, 1943, 2012, 2060, 2252, 2297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.