Rw5G021400

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
28797815 .. 28809030
11216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021400.1

Sequence Viewer

Length: 2904 bp
ATGAGCGGTTATGAGCATATTAGTTTTATGTGGTATTTAGGGTTCACAAATGTAAAATGTCCGTGTGTATTTATCTCATGTGTTTTCCTTTTTTACCATTATGCTCCCCATTTTGGTTCTCTGCGTCGTCTGCATACTCATCTGAAGTCTCAAAAAAGTCCTGGATCCTTATATGTCGAATGGGGACCCTTTCTTACAGGGCAAGACCTTGCTGGTGTGCTTCCACCGTCTATTGAAAAGTTACCCTACCTGATAAATGTCGATTTCTCGTGGAACTACCTCAATGGCAGCATACCGCGAGAATTACAATGCAGGTCCCTTATTGTGAACAACTTATCAGGACCAATCCCGAGCTATTTGGGAAACATTACCACTCTAACATATCTGAGCATAGAGAATAACATGTTCTCAGGAACTGTTCCTCCTGAGCTTGGAAACTTGGTTAACTTGCGGAATCTTTTTCTTACTGCAAACAATCTCATAGGAGAATTGCCGGTGGCTCTTATGAATCTGACTAAGTTAACAAAACTGAGGATTAACAGCAACAACTTCACTGGGAGAATTCCTGACATTTTTCAAAGTTGGAATCAACTTCAGAAATTAGAGATCCAAGCTAGTGGTCTAGAAGGCCCCATTCCATCTAGCATTTCTGTCTTGAGTAATTTAACAGAACTAATGATCAGTGGCTTAAACGGAGGGGGTTCAGTATTTCCAAACTTGAGGAATATGATGAGCTTGCAAAGATTAATGCTCAGGAGCTGTAATTTATCTGGACCTATTCCTTCCTATTTATCAGCAATGTCACGGTTAAAAATATTAGATCTAAGCTTCAACAGATTAGTGGGGAGCATTCCTGATTTGGCAGATCTGACATCCTTGCAGAACTTGTATCTAACAAGCAACTTGCTTACTGGATCTATTCCAGAGTGGATCAAGAGCAGAGATCGCTGCGAGATAGATGTTTCTTACAATAATTTTTCTGAGAGCTCTGAACCACCTTCTTGTACAGAAACCCTGAACGTGTTCAAAAGCTTTTCTGCACGTGATAGCTCATTATATGCGGAGTGCCTGAAGAGCTCTCCATGTCCAAAAGATCAGTACTCATTGCATATCAATTGTGGTGGTAAAGCAACCACCATTGGAGAAATCATGTTTGAAGCGGATCAAAACCCAGGAGGTGCAGCACATTTTGTTCCTTCTGGGCCTAGCTGGGGATTCAGTAGCACTGGACATTTCTGGGATCTTGACAGCACCTCTACATACTACGTGGAGTACGTACCAACTAATGTATCTATACTCAGGATGGACAACTCTGAGTTGTACACAGATGCACGCCTCTCTCCTCTTTCTCTCACGTATTATGGACGCTGCTTCGGCAGTGGAAATTATACTGTGAAGCTTTACTTTTCGGAGATTATTATCAGAGGCAATAGATCTTTTTCTAGTCTTGGAAGACGGATCTTCGATGTTTATATTCAGGAGAAGCTAGTGTTGAAGGATTTCGACATTGAAAAGGATGCCCAAGGGGTTGATAAGGCAGTCATCAGGGAATTCAAAGCAGTTGAGGTTAAGAAGAAAACTTTAGAGATCCGATTTCATTGGTCTGGGAAAGGGAAAACAGCTTCCCCAAAGAGAGGAGTATATGGTCCCCTTATTTCAGCTATCTCTATAGAATCAGAGTTCAAGCCTCCTCATGATAGCAAGACATGGGTATTTATTGTGGTGGGAGCTACGGTTTTGTGCCTCATTCTGTTGATTTTAAGCATTCTTTGGTGGAGAGGCTGTCTGGATAAGAAGACATCAAGAGAAGAAGCTCTGAGAGGACTGGATCTGCAAACTGGCTTTTTCACCTTCAAGCAAATAAAAGCTGCCACTAATAACTTTGATCCTGTAAACAAAATTGGGGAAGGTGGTTTTGGATCTGTGTACAAGGGAATACTACTGGATGGTACTATAATTGCAGTAAAGCAATTATCTGCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTACAGCATCCAAATGTCGTGAGATTGTATGGATGTTGTATTGAAGCAAATCAGTTACTTTTGGTATATGAATACATGGATAACAATAGCCTTGCACATGCTTTGTTTGGTCCAGAGGGAGGTCTGGACTGGCCTACGAGGCAGAAAATATGCATAGGCATAGCAAAAGGTCTGGCATTTTTGCATGAGGAATCAGCACTGAAGGTTGTCCACAGAGATATTAAATCTACGAATGTATTACTGGACCAAGACCTTAACGCTAAGATCTCAGACTTTGGTCTGGCCAAGCTTGACGAAGAGAATACCCACATTAGCACCACAGTTGCCGGAACTGTAGGATACATGGCGCCTGAATATGCACTATGGGGTTATTTAACATACAAAGCAGATGTATACAGTTTTGGTGTTGTCGCATTGGAAATTGTTGTTGGAAAGAACAACATGAAATTTCGAGCAGATGAGAACTTTGTAGGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATCTAATGGAGCTGGTGGATCCAAGGCTGGGGTCCGATTTCAGCAAGGAAGAGGCAATTAGAATGGTCAAAGTAGCTCTGCTATGCACCAATCCGGCACCAGCACTTAGGCCTACGATGTCTGCAGTAGTGAGTATGCTTGAAGGGAGGAGCGTTGTTCCTGAATTGATTATGGATCCAAGTATCTATGGTGATGAGACGAGGTTGACAGGCTTGAGGGACCGGTTTGAGAAGTTTGCAGCAGAAGACAGCTCATCAAGTGGAACTCAGAGCCTCTTGCGTGGATCAGATGCAACATCGATTGGTTGTTCTGCTACTGCTACATCTTCAGATCTCTACAAAGTTAGTCCTACTTCTTAG

Protein Analysis

967

Amino Acids

107.03

Weight (kDa)

6.6

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 118 - 226 6.9e-10 Leucine-rich repeat region
LRR_8 PF13855 245 - 303 5e-06 Leucine rich repeat
Malectin PF11721 368 - 555 1.3e-35 Malectin domain
Pkinase PF00069 631 - 891 1.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 632 - 894 8.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 303
AccB1I GGYRCC 2 cut(s) 2380, 2641
AccBSI CCGCTC 1 cut(s) 6
AccI GTMKAC 1 cut(s) 2427
AccII CGCG 1 cut(s) 298
AciI CCGC 5 cut(s) 6, 296, 451, 1061, 1160
AcoI YGGCCR 1 cut(s) 2316
AcsI RAATTY 4 cut(s) 561, 1550, 2003, 2480
AcuI CTGAAG 5 cut(s) 164, 578, 1091, 2255, 2856
AcvI CACGTG 1 cut(s) 1043
AcyI GRCGYC 1 cut(s) 2381
AfaI GTAC 7 cut(s) 1006, 1100, 1274, 1278, 1322, 1928, 1951
AfiI CCNNNNNNNGG 6 cut(s) 113, 431, 1211, 1634, 2153, 2573
AflIII ACRYGT 2 cut(s) 402, 1020
AgeI ACCGGT 1 cut(s) 2766
AjnI CCWGG 2 cut(s) 160, 1171
AjuI GAANNNNNNNTTGG 4 cut(s) 1899, 1931, 2445, 2477
AloI GAACNNNNNNTCC 2 cut(s) 406, 438
Alw21I GWGCWC 2 cut(s) 989, 1079
Alw26I GTCTC 2 cut(s) 153, 2735
AlwNI CAGNNNCTG 2 cut(s) 416, 759
Ama87I CYCGRG 1 cut(s) 349
AoxI GGCC 7 cut(s) 628, 1202, 2165, 2316, 2506, 2520, 2654
ApaI GGGCCC 1 cut(s) 2524
ApeKI GCWGC 6 cut(s) 288, 948, 1181, 1368, 1868, 2783
ApoI RAATTY 4 cut(s) 561, 1550, 2003, 2480
AseI ATTAAT 1 cut(s) 746
AsiGI ACCGGT 1 cut(s) 2766
Asp700I GAANNNNTTC 2 cut(s) 1022, 1499
AspLEI GCGC 1 cut(s) 2383
AsuHPI GGTGA 2 cut(s) 1840, 2747
AvaI CYCGRG 1 cut(s) 349
AvaII GGWCC 9 cut(s) 185, 315, 341, 773, 1646, 2144, 2278, 2577, 2764
BaeGI GKGCMC 1 cut(s) 2524
BaeI ACNNNNGTAYC 2 cut(s) 1272, 1305
BalI TGGCCA 1 cut(s) 2318
BamHI GGATCC 3 cut(s) 164, 2563, 2719
BanI GGYRCC 2 cut(s) 2380, 2641
BanII GRGCYC 3 cut(s) 989, 1079, 2524
BauI CACGAG 1 cut(s) 268
BbrPI CACGTG 1 cut(s) 1043
BbsI GAAGAC 3 cut(s) 1459, 1802, 2796
Bbv12I GWGCWC 2 cut(s) 989, 1079
BbvI GCAGC 6 cut(s) 300, 935, 1193, 1355, 1855, 2795
BccI CCATC 3 cut(s) 646, 1297, 1940
BcgI CGANNNNNNTGC 2 cut(s) 1979, 2013
BciT130I CCWGG 2 cut(s) 162, 1173
BciVI GTATCC 1 cut(s) 2366
BclI TGATCA 1 cut(s) 678
BcoDI GTCTC 2 cut(s) 153, 2735
BfaI CTAG 6 cut(s) 615, 623, 642, 1206, 1443, 1487
BfmI CTRYAG 3 cut(s) 1668, 2367, 2667
BfoI RGCGCY 1 cut(s) 2384
BfuAI ACCTGC 1 cut(s) 303
BfuI GTATCC 1 cut(s) 2366
BglI GCCNNNNNGGC 1 cut(s) 2173
BglII AGATCT 5 cut(s) 820, 865, 1433, 2298, 2875
BisI GCNGC 6 cut(s) 289, 949, 1182, 1369, 1869, 2784
BlsI GCNGC 6 cut(s) 290, 950, 1183, 1370, 1870, 2785
BmcAI AGTACT 1 cut(s) 1100
Bme1390I CCNGG 2 cut(s) 162, 1173
Bme18I GGWCC 9 cut(s) 185, 315, 341, 773, 1646, 2144, 2278, 2577, 2764
BmeT110I CYCGRG 1 cut(s) 349
BmrFI CCNGG 2 cut(s) 162, 1173
BmrI ACTGGG 1 cut(s) 564
BmsI GCATC 4 cut(s) 1318, 1507, 2050, 2824
BmuI ACTGGG 1 cut(s) 564
BoxI GACNNNNGTC 1 cut(s) 2310
BpiI GAAGAC 3 cut(s) 1459, 1802, 2796
Bpu10I CCTNAGC 2 cut(s) 426, 752
BpuEI CTTGAG 3 cut(s) 676, 739, 2779
Bsa29I ATCGAT 1 cut(s) 2843
BsaAI YACGTR 4 cut(s) 1043, 1267, 1276, 1356
BsaBI GATNNNNATC 1 cut(s) 1418
BsaHI GRCGYC 1 cut(s) 2381
BsaJI CCNNGG 3 cut(s) 1171, 1522, 2567
BsaWI WCCGGW 1 cut(s) 2766
BsaXI ACNNNNNCTCC 6 cut(s) 406, 436, 1719, 1749, 1768, 1798
Bsc4I CCNNNNNNNGG 6 cut(s) 113, 431, 1211, 1634, 2153, 2573
Bse118I RCCGGY 2 cut(s) 493, 2766
Bse1I ACTGG 8 cut(s) 559, 916, 1231, 1830, 1843, 1947, 2168, 2280
Bse3DI GCAATG 2 cut(s) 804, 1103
Bse8I GATNNNNATC 1 cut(s) 1418
BseBI CCWGG 2 cut(s) 162, 1173
BseCI ATCGAT 1 cut(s) 2843
BseDI CCNNGG 3 cut(s) 1171, 1522, 2567
BseGI GGATG 6 cut(s) 872, 1308, 1522, 1951, 2041, 2072
BseJI GATNNNNATC 1 cut(s) 1418
BseLI CCNNNNNNNGG 6 cut(s) 113, 431, 1211, 1634, 2153, 2573
BseMI GCAATG 2 cut(s) 804, 1103
BseNI ACTGG 8 cut(s) 559, 916, 1231, 1830, 1843, 1947, 2168, 2280
BseRI GAGGAG 4 cut(s) 1332, 1650, 1680, 2707
BseSI GKGCMC 1 cut(s) 2524
BseXI GCAGC 6 cut(s) 300, 935, 1193, 1355, 1855, 2795
BseYI CCCAGC 2 cut(s) 1209, 2572
BsgI GTGCAG 2 cut(s) 1023, 1200
Bsh1236I CGCG 1 cut(s) 298
BshFI GGCC 7 cut(s) 630, 1204, 2167, 2318, 2508, 2522, 2656
BshNI GGYRCC 2 cut(s) 2380, 2641
BshTI ACCGGT 1 cut(s) 2766
BshVI ATCGAT 1 cut(s) 2843
BsiHKAI GWGCWC 2 cut(s) 989, 1079
BsiHKCI CYCGRG 1 cut(s) 349
BsiSI CCGG 4 cut(s) 494, 2361, 2639, 2767
BslFI GGGAC 4 cut(s) 198, 301, 1632, 2777
BslI CCNNNNNNNGG 6 cut(s) 113, 431, 1211, 1634, 2153, 2573
BsmAI GTCTC 2 cut(s) 153, 2735
BsmBI CGTCTC 1 cut(s) 2735
BsmFI GGGAC 4 cut(s) 198, 301, 1632, 2777
BsmI GAATGC 2 cut(s) 849, 1764
BsnI GGCC 7 cut(s) 630, 1204, 2167, 2318, 2508, 2522, 2656
BsoBI CYCGRG 1 cut(s) 349
Bsp120I GGGCCC 1 cut(s) 2520
Bsp1286I GDGCHC 3 cut(s) 989, 1079, 2524
Bsp1407I TGTACA 3 cut(s) 1004, 1320, 1926
BspACI CCGC 5 cut(s) 6, 296, 451, 1061, 1160
BspANI GGCC 7 cut(s) 630, 1204, 2167, 2318, 2508, 2522, 2656
BspDI ATCGAT 1 cut(s) 2843
BspFNI CGCG 1 cut(s) 298
BspHI TCATGA 1 cut(s) 1693
BspMAI CTGCAG 1 cut(s) 2671
BspMI ACCTGC 1 cut(s) 303
BspQI GCTCTTC 1 cut(s) 1067
BspT107I GGYRCC 2 cut(s) 2380, 2641
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 2 cut(s) 804, 1103
BsrFI RCCGGY 2 cut(s) 493, 2766
BsrGI TGTACA 3 cut(s) 1004, 1320, 1926
BsrI ACTGG 8 cut(s) 559, 916, 1231, 1830, 1843, 1947, 2168, 2280
BssAI RCCGGY 2 cut(s) 493, 2766
BssECI CCNNGG 3 cut(s) 1171, 1522, 2567
BssNAI GTATAC 1 cut(s) 2428
BssNI GRCGYC 1 cut(s) 2381
BssSI CACGAG 1 cut(s) 268
BssT1I CCWWGG 2 cut(s) 1522, 2567
Bst1107I GTATAC 1 cut(s) 2428
Bst2BI CACGAG 1 cut(s) 268
Bst2UI CCWGG 2 cut(s) 162, 1173
Bst4CI ACNGT 8 cut(s) 228, 418, 807, 1393, 1735, 2356, 2368, 2432
Bst6I CTCTTC 3 cut(s) 1067, 2325, 2589
BstACI GRCGYC 1 cut(s) 2381
BstAUI TGTACA 3 cut(s) 1004, 1320, 1926
BstBAI YACGTR 4 cut(s) 1043, 1267, 1276, 1356
BstC8I GCNNGC 2 cut(s) 737, 1333
BstF5I GGATG 6 cut(s) 872, 1308, 1522, 1951, 2041, 2072
BstFNI CGCG 1 cut(s) 298
BstH2I RGCGCY 1 cut(s) 2384
BstHHI GCGC 1 cut(s) 2383
BstMAI GTCTC 2 cut(s) 153, 2735
BstMWI GCNNNNNNNGC 5 cut(s) 130, 945, 1074, 1374, 2173
BstNI CCWGG 2 cut(s) 162, 1173
BstNSI RCATGY 2 cut(s) 406, 2135
BstPAI GACNNNNGTC 1 cut(s) 2310
BstSCI CCNGG 2 cut(s) 160, 1171
BstSFI CTRYAG 3 cut(s) 1668, 2367, 2667
BstSLI GKGCMC 1 cut(s) 2524
BstSNI TACGTA 1 cut(s) 1276
BstUI CGCG 1 cut(s) 298
BstV1I GCAGC 6 cut(s) 300, 935, 1193, 1355, 1855, 2795
BstV2I GAAGAC 3 cut(s) 1459, 1802, 2796
BstXI CCANNNNNNTGG 1 cut(s) 617
BstZ17I GTATAC 1 cut(s) 2428
Bsu15I ATCGAT 1 cut(s) 2843
BsuI GTATCC 1 cut(s) 2366
BsuRI GGCC 7 cut(s) 630, 1204, 2167, 2318, 2508, 2522, 2656
BsuTUI ATCGAT 1 cut(s) 2843
BtsCI GGATG 6 cut(s) 872, 1308, 1522, 1951, 2041, 2072
BtsI GCAGTG 1 cut(s) 1384
BtsIMutI CAGTG 5 cut(s) 552, 688, 1224, 1384, 2231
BveI ACCTGC 1 cut(s) 303
Cac8I GCNNGC 2 cut(s) 737, 1333
CaiI CAGNNNCTG 2 cut(s) 416, 759
CciI TCATGA 1 cut(s) 1693
CfoI GCGC 1 cut(s) 2383
Cfr10I RCCGGY 2 cut(s) 493, 2766
ClaI ATCGAT 1 cut(s) 2843
CseI GACGC 2 cut(s) 113, 1374
Csp6I GTAC 7 cut(s) 1005, 1099, 1273, 1277, 1321, 1927, 1950
CspAI ACCGGT 1 cut(s) 2766
CspCI CAANNNNNGTGG 2 cut(s) 1102, 1137
CviQI GTAC 7 cut(s) 1005, 1099, 1273, 1277, 1321, 1927, 1950
DinI GGCGCC 1 cut(s) 2382
EaeI YGGCCR 1 cut(s) 2316
Eam1104I CTCTTC 3 cut(s) 1067, 2325, 2589
EarI CTCTTC 3 cut(s) 1067, 2325, 2589
Ecl136II GAGCTC 2 cut(s) 987, 1077
Eco105I TACGTA 1 cut(s) 1276
Eco130I CCWWGG 2 cut(s) 1522, 2567
Eco147I AGGCCT 2 cut(s) 2508, 2656
Eco24I GRGCYC 3 cut(s) 989, 1079, 2524
Eco47I GGWCC 9 cut(s) 185, 315, 341, 773, 1646, 2144, 2278, 2577, 2764
Eco53kI GAGCTC 2 cut(s) 987, 1077
Eco57I CTGAAG 5 cut(s) 164, 578, 1091, 2255, 2856
Eco72I CACGTG 1 cut(s) 1043
Eco88I CYCGRG 1 cut(s) 349
EcoICRI GAGCTC 2 cut(s) 987, 1077
EcoO109I RGGNCCY 4 cut(s) 185, 315, 629, 2521
EcoRI GAATTC 2 cut(s) 561, 1550
EcoRII CCWGG 2 cut(s) 160, 1171
EcoT14I CCWWGG 2 cut(s) 1522, 2567
EcoT22I ATGCAT 1 cut(s) 2189
EcoT38I GRGCYC 3 cut(s) 989, 1079, 2524
EgeI GGCGCC 1 cut(s) 2382
EheI GGCGCC 1 cut(s) 2382
ErhI CCWWGG 2 cut(s) 1522, 2567
Esp3I CGTCTC 1 cut(s) 2735
FalI AAGNNNNNCTT 2 cut(s) 1388, 1420
FaqI GGGAC 4 cut(s) 198, 301, 1632, 2777
FbaI TGATCA 1 cut(s) 678
FblI GTMKAC 1 cut(s) 2427
Fnu4HI GCNGC 6 cut(s) 289, 949, 1182, 1369, 1869, 2784
FokI GGATG 6 cut(s) 859, 1315, 1529, 1958, 2028, 2079
FriOI GRGCYC 3 cut(s) 989, 1079, 2524
Fsp4HI GCNGC 6 cut(s) 289, 949, 1182, 1369, 1869, 2784
FspBI CTAG 6 cut(s) 615, 623, 642, 1206, 1443, 1487
GlaI GCGC 1 cut(s) 2382
GluI GCNGC 6 cut(s) 289, 949, 1182, 1369, 1869, 2784
GsaI CCCAGC 2 cut(s) 1213, 2576
HaeII RGCGCY 1 cut(s) 2384
HaeIII GGCC 7 cut(s) 630, 1204, 2167, 2318, 2508, 2522, 2656
HapII CCGG 4 cut(s) 494, 2361, 2639, 2767
HgaI GACGC 2 cut(s) 113, 1374
HhaI GCGC 1 cut(s) 2383
Hin1I GRCGYC 1 cut(s) 2381
Hin6I GCGC 1 cut(s) 2381
HinP1I GCGC 1 cut(s) 2381
HincII GTYRAC 3 cut(s) 445, 522, 2751
HindII GTYRAC 3 cut(s) 445, 522, 2751
HindIII AAGCTT 4 cut(s) 826, 1030, 1397, 2321
HinfI GANTC 7 cut(s) 454, 508, 586, 1215, 1673, 2225, 2545
HpaI GTTAAC 2 cut(s) 445, 522
HpaII CCGG 4 cut(s) 494, 2361, 2639, 2767
HphI GGTGA 2 cut(s) 1840, 2747
Hpy99I CGWCG 1 cut(s) 129
HpyAV CCTTC 9 cut(s) 620, 792, 1008, 1206, 1489, 1861, 1901, 2230, 2681
HpyCH4III ACNGT 8 cut(s) 228, 418, 807, 1393, 1735, 2356, 2368, 2432
HpyCH4IV ACGT 5 cut(s) 1020, 1042, 1266, 1275, 1355
HpyF10VI GCNNNNNNNGC 5 cut(s) 130, 945, 1074, 1374, 2173
HpySE526I ACGT 5 cut(s) 1020, 1042, 1266, 1275, 1355
Hsp92I GRCGYC 1 cut(s) 2381
HspAI GCGC 1 cut(s) 2381
KasI GGCGCC 1 cut(s) 2380
KflI GGGWCCC 1 cut(s) 185
Ksp22I TGATCA 1 cut(s) 678
KspAI GTTAAC 2 cut(s) 445, 522
LguI GCTCTTC 1 cut(s) 1067
LmnI GCTCC 6 cut(s) 109, 756, 846, 1727, 2554, 2694
Lsp1109I GCAGC 6 cut(s) 300, 935, 1193, 1355, 1855, 2795
LweI GCATC 4 cut(s) 1318, 1507, 2050, 2824
MaeI CTAG 6 cut(s) 615, 623, 642, 1206, 1443, 1487
MaeII ACGT 5 cut(s) 1020, 1042, 1266, 1275, 1355
MaeIII GTNAC 3 cut(s) 240, 801, 2088
MbiI CCGCTC 1 cut(s) 6
MfeI CAATTG 1 cut(s) 1114
MhlI GDGCHC 3 cut(s) 989, 1079, 2524
MlsI TGGCCA 1 cut(s) 2318
MluNI TGGCCA 1 cut(s) 2318
Mly113I GGCGCC 1 cut(s) 2381
MmeI TCCRAC 2 cut(s) 563, 2443
Mox20I TGGCCA 1 cut(s) 2318
Mph1103I ATGCAT 1 cut(s) 2189
MroXI GAANNNNTTC 2 cut(s) 1022, 1499
MscI TGGCCA 1 cut(s) 2318
MslI CAYNNNNRTG 1 cut(s) 2046
Msp20I TGGCCA 1 cut(s) 2318
MspI CCGG 4 cut(s) 494, 2361, 2639, 2767
MspR9I CCNGG 2 cut(s) 162, 1173
MunI CAATTG 1 cut(s) 1114
Mva1269I GAATGC 2 cut(s) 849, 1764
MvaI CCWGG 2 cut(s) 162, 1173
MvnI CGCG 1 cut(s) 298
MwoI GCNNNNNNNGC 5 cut(s) 130, 945, 1074, 1374, 2173
NarI GGCGCC 1 cut(s) 2381
NmuCI GTSAC 1 cut(s) 801
NsiI ATGCAT 1 cut(s) 2189
NspI RCATGY 2 cut(s) 406, 2135
PagI TCATGA 1 cut(s) 1693
PceI AGGCCT 2 cut(s) 2508, 2656
PciI ACATGT 1 cut(s) 402
PciSI GCTCTTC 1 cut(s) 1067
PcsI WCGNNNNNNNCGW 1 cut(s) 1272
PctI GAATGC 2 cut(s) 849, 1764
PdmI GAANNNNTTC 2 cut(s) 1022, 1499
PfeI GAWTC 7 cut(s) 454, 508, 586, 1215, 1673, 2225, 2545
PfoI TCCNGGA 1 cut(s) 160
PinAI ACCGGT 1 cut(s) 2766
PkrI GCNGC 6 cut(s) 290, 950, 1183, 1370, 1870, 2785
PluTI GGCGCC 1 cut(s) 2384
PmaCI CACGTG 1 cut(s) 1043
PmlI CACGTG 1 cut(s) 1043
Ppu21I YACGTR 4 cut(s) 1043, 1267, 1276, 1356
PpuMI RGGWCCY 2 cut(s) 185, 315
PscI ACATGT 1 cut(s) 402
PshAI GACNNNNGTC 1 cut(s) 2310
PshBI ATTAAT 1 cut(s) 746
Psp124BI GAGCTC 2 cut(s) 989, 1079
Psp5II RGGWCCY 2 cut(s) 185, 315
Psp6I CCWGG 2 cut(s) 160, 1171
PspCI CACGTG 1 cut(s) 1043
PspFI CCCAGC 2 cut(s) 1209, 2572
PspGI CCWGG 2 cut(s) 160, 1171
PspOMI GGGCCC 1 cut(s) 2520
PspPPI RGGWCCY 2 cut(s) 185, 315
PsrI GAACNNNNNNTAC 2 cut(s) 26, 58
PstI CTGCAG 1 cut(s) 2671
PstNI CAGNNNCTG 2 cut(s) 416, 759
RsaI GTAC 7 cut(s) 1006, 1100, 1274, 1278, 1322, 1928, 1951
RsaNI GTAC 7 cut(s) 1005, 1099, 1273, 1277, 1321, 1927, 1950
RseI CAYNNNNRTG 1 cut(s) 2046
SacI GAGCTC 2 cut(s) 989, 1079
SapI GCTCTTC 1 cut(s) 1067
SatI GCNGC 6 cut(s) 289, 949, 1182, 1369, 1869, 2784
ScaI AGTACT 1 cut(s) 1100
ScrFI CCNGG 2 cut(s) 162, 1173
SduI GDGCHC 3 cut(s) 989, 1079, 2524
SfaNI GCATC 4 cut(s) 1318, 1507, 2050, 2824
SfcI CTRYAG 3 cut(s) 1668, 2367, 2667
SfoI GGCGCC 1 cut(s) 2382
SinI GGWCC 9 cut(s) 185, 315, 341, 773, 1646, 2144, 2278, 2577, 2764
SmiMI CAYNNNNRTG 1 cut(s) 2046
SmlI CTYRAG 3 cut(s) 655, 718, 2758
SmoI CTYRAG 3 cut(s) 655, 718, 2758
SnaBI TACGTA 1 cut(s) 1276
SseBI AGGCCT 2 cut(s) 2508, 2656
SsiI CCGC 5 cut(s) 6, 296, 451, 1061, 1160
SspDI GGCGCC 1 cut(s) 2380
SspI AATATT 1 cut(s) 816
SspMI CTAG 6 cut(s) 615, 623, 642, 1206, 1443, 1487
SstI GAGCTC 2 cut(s) 989, 1079
StuI AGGCCT 2 cut(s) 2508, 2656
StyD4I CCNGG 2 cut(s) 160, 1171
StyI CCWWGG 2 cut(s) 1522, 2567
TaaI ACNGT 8 cut(s) 228, 418, 807, 1393, 1735, 2356, 2368, 2432
TaiI ACGT 5 cut(s) 1023, 1045, 1269, 1278, 1358
TaqI TCGA 6 cut(s) 177, 261, 1464, 1503, 2485, 2843
TatI WGTACW 4 cut(s) 1004, 1098, 1320, 1926
TfiI GAWTC 7 cut(s) 454, 508, 586, 1215, 1673, 2225, 2545
TscAI CASTG 5 cut(s) 559, 688, 1231, 1384, 2238
TseFI GTSAC 1 cut(s) 801
TseI GCWGC 6 cut(s) 288, 948, 1181, 1368, 1868, 2783
Tsp45I GTSAC 1 cut(s) 801
TspDTI ATGAA 4 cut(s) 521, 1586, 2118, 2492
TspGWI ACGGA 3 cut(s) 51, 708, 1471
TspRI CASTG 5 cut(s) 559, 688, 1231, 1384, 2238
VpaK11BI GGWCC 9 cut(s) 185, 315, 341, 773, 1646, 2144, 2278, 2577, 2764
VspI ATTAAT 1 cut(s) 746
XapI RAATTY 4 cut(s) 561, 1550, 2003, 2480
XbaI TCTAGA 1 cut(s) 622
XceI RCATGY 2 cut(s) 406, 2135
XmiI GTMKAC 1 cut(s) 2427
XmnI GAANNNNTTC 2 cut(s) 1022, 1499
XspI CTAG 6 cut(s) 615, 623, 642, 1206, 1443, 1487
ZrmI AGTACT 1 cut(s) 1100
Zsp2I ATGCAT 1 cut(s) 2189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.