Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Forward (+)

8178203 .. 8181385

Gene Structure 3183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29283

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGTTTCTGTTCAGTACTCATTGCATATAAATTGTGGTGGACGAGAAAGCACGATTGAAGGAGTCAAATTTGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTCTTCCAAGACCTAACTGGGGAACCAGTATCACTGGATTTTTCTGGGATACTAACATCACTGCTGATGACTACATAGCAAATAATGTATCGGTACTTGGAATGGAAAACTCTGAGTTGTACACGAATGCCCGCCTCACTCCTCTTTCTCTCACATATTATGCAAACTGCTTAGGCCATGGAAATTATACTGTCCAACTTCACTTTGCGGAGATAATAATCCGAGGCAATAGATCCTTTCACAGTGTTGGAAGACGGATATTTGATGTCTACATCCAGGAGAAACTCGTATGGAAGGATTTTGACATTGTAAAGGAAGCAAAAGGTGTTGATAAGGAAGTCATTAAGGAGACAAAGGCAGTTCAGGTTAAGAATAAAAGTCTAGAGATTCGGTTTCATTGGTCTGGGAAAGGCACAACAGATTCCCCAAGAAGAGGAGTCTATGGTCCCCTTATATCAGCCATTTCTATAAAATCTGAGTTCAACCATTCCAAAACGAAGATATATATTGTGGTTGGAGTTTCAGTTGGAGCTACGGTTTTGTGCCTTTTCTTCTTAATTTTTGGCATTATTTGGTGGAAAGGCTGTCGGGTGGATAAACAAACATCAAGAGAAGAAGTTCTGAGGGGACTGGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTTTAAACAAAATTGGAGAAGGTGGTTTTGGTCCCGTCTACAAGGGTATACTATTGGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCGAAGCAAGGAAATCGTGAATTTGTGAACGAAATAGGCATGATCTCTTGTTTGCAGCATCCAAATCTAGTTAGAATGTATGGATGTTGTATTGAAGAAAACCAGTTATTGTTGGTATATGAGTACATGGAGAACAACAGCCTTGCTCGCGCTTTGTACGGTCCAGAGGATGATCTCCTAAATTTGGACTGGCCTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCATGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATGTGTTACTGGACCAAGACCTCAATGCTAAGATATCAGACTTTGGTTTGGCCAAGCTTGATGAAGAGGATAACACTCACATTAGCACCAGGATTGCTGGAACTATAGGATACATGGCACCGGAATATGCTCTATGGGGATGTTTGACCTATAAAGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACATGAAATATCGACCTAATGAGAACATTCAATGTCTTATGGATTGGGCCCTTGTTTTGCAACAAAGAGGGAACTTACTGAAGCTGGTGGATCCAAGGTTGGGGTCCGATTTCAGTAAGAAAGAGGCGATTAGAACGATCAAAGTAGCTCTACTGTGCGCCAACCCAACAGCTGCACTTAGGCCTACCATGTCTGCAGTAGTGAGTATGTTTGAAGGGCGGACCCCCGTGGATGAAGTGGTTCTGGATCCAAGTATCCTTGGTGATGAAATGACGAGGTTAAGAGCCTTCGAAGAGCAGTTTGATCATAGTACTGCAGAAGGGAGCTCCCCAAGTGGAAGTCACAGCCTCATTCGTTCATCAGATGCACCATGGACCGGTTCTTCTGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

607

Amino Acids

67.58

Weight (kDa)

6.35

Isoelectric Point (pI)

31.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	7 - 190	4.8e-37	Malectin domain
Pkinase	PF00069	268 - 479	2.3e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	269 - 475	1.3e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1303
AccI	GTMKAC	4 cut(s)	375, 837, 847, 1350
AccII	CGCG	1 cut(s)	1044
AciI	CCGC	3 cut(s)	238, 314, 1615
AclWI	GGATC	7 cut(s)	333, 747, 791, 1481, 1494, 1637, 1650
AcoI	YGGCCR	1 cut(s)	1236
AcsI	RAATTY	4 cut(s)	68, 104, 914, 1075
AcuI	CTGAAG	2 cut(s)	1496, 1782
AfaI	GTAC	8 cut(s)	17, 201, 227, 862, 1019, 1052, 1164, 1708
AfiI	CCNNNNNNNGG	5 cut(s)	125, 539, 1078, 1496, 1772
AgeI	ACCGGT	1 cut(s)	1772
AgsI	TTSAA	7 cut(s)	59, 74, 589, 891, 989, 1427, 1610
AjnI	CCWGG	2 cut(s)	381, 1274
AjuI	GAANNNNNNNTTGG	2 cut(s)	810, 842
AluBI	AGCT	7 cut(s)	638, 779, 1243, 1480, 1544, 1568, 1722
AluI	AGCT	7 cut(s)	638, 779, 1243, 1480, 1544, 1568, 1722
Alw21I	GWGCWC	1 cut(s)	1724
Alw26I	GTCTC	2 cut(s)	449, 1164
AlwI	GGATC	7 cut(s)	333, 747, 791, 1481, 1494, 1637, 1650
AoxI	GGCC	5 cut(s)	280, 1085, 1236, 1443, 1577
ApaI	GGGCCC	1 cut(s)	1447
ApeKI	GCWGC	3 cut(s)	779, 949, 1568
ApoI	RAATTY	4 cut(s)	68, 104, 914, 1075
AsiGI	ACCGGT	1 cut(s)	1772
Asp700I	GAANNNNTTC	2 cut(s)	723, 1635
AspA2I	CCTAGG	1 cut(s)	1108
AspLEI	GCGC	2 cut(s)	1046, 1556
AspS9I	GGNCC	9 cut(s)	551, 830, 1055, 1198, 1443, 1444, 1500, 1617, 1770
AsuHPI	GGTGA	2 cut(s)	751, 1670
AsuII	TTCGAA	1 cut(s)	1686
AvaII	GGWCC	7 cut(s)	551, 830, 1055, 1198, 1500, 1617, 1770
AvrII	CCTAGG	1 cut(s)	1108
BaeGI	GKGCMC	1 cut(s)	1447
BalI	TGGCCA	1 cut(s)	1238
BamHI	GGATCC	2 cut(s)	1486, 1642
BanI	GGYRCC	1 cut(s)	1303
BanII	GRGCYC	2 cut(s)	1447, 1724
BbsI	GAAGAC	2 cut(s)	364, 1788
Bbv12I	GWGCWC	1 cut(s)	1724
BbvI	GCAGC	3 cut(s)	766, 961, 1555
BccI	CCATC	1 cut(s)	851
BcgI	CGANNNNNNTGC	2 cut(s)	890, 924
BciT130I	CCWGG	2 cut(s)	383, 1276
BciVI	GTATCC	3 cut(s)	148, 1289, 1661
BclI	TGATCA	1 cut(s)	1699
BcoDI	GTCTC	2 cut(s)	449, 1164
BfaI	CTAG	3 cut(s)	488, 962, 1109
BfmI	CTRYAG	5 cut(s)	743, 1290, 1351, 1590, 1710
BfuI	GTATCC	3 cut(s)	148, 1289, 1661
BglI	GCCNNNNNGGC	1 cut(s)	1093
BglII	AGATCT	2 cut(s)	85, 1801
BisI	GCNGC	3 cut(s)	780, 950, 1569
BlnI	CCTAGG	1 cut(s)	1108
BlsI	GCNGC	3 cut(s)	781, 951, 1570
BmcAI	AGTACT	2 cut(s)	17, 1708
Bme1390I	CCNGG	2 cut(s)	383, 1276
Bme18I	GGWCC	7 cut(s)	551, 830, 1055, 1198, 1500, 1617, 1770
BmgT120I	GGNCC	9 cut(s)	551, 830, 1055, 1198, 1443, 1444, 1500, 1617, 1770
BmiI	GGNNCC	9 cut(s)	130, 553, 832, 1305, 1445, 1488, 1501, 1619, 1644
BmrFI	CCNGG	2 cut(s)	383, 1276
BmrI	ACTGGG	1 cut(s)	133
BmsI	GCATC	2 cut(s)	961, 1750
BmuI	ACTGGG	1 cut(s)	133
BpiI	GAAGAC	2 cut(s)	364, 1788
Bpu10I	CCTNAGC	1 cut(s)	277
Bpu14I	TTCGAA	1 cut(s)	1686
BpuEI	CTTGAG	1 cut(s)	784
BsaBI	GATNNNNATC	2 cut(s)	84, 323
BsaJI	CCNNGG	7 cut(s)	283, 328, 1108, 1490, 1623, 1654, 1766
BsaWI	WCCGGW	2 cut(s)	1306, 1772
BsaXI	ACNNNNNCTCC	4 cut(s)	615, 627, 645, 657
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 539, 1078, 1496, 1772
Bse118I	RCCGGY	1 cut(s)	1772
Bse1I	ACTGG	8 cut(s)	128, 132, 145, 741, 754, 997, 1088, 1200
Bse3DI	GCAATG	1 cut(s)	20
Bse8I	GATNNNNATC	2 cut(s)	84, 323
BseBI	CCWGG	2 cut(s)	383, 1276
BseDI	CCNNGG	7 cut(s)	283, 328, 1108, 1490, 1623, 1654, 1766
BseGI	GGATG	7 cut(s)	378, 862, 952, 983, 1069, 1331, 1633
BseJI	GATNNNNATC	2 cut(s)	84, 323
BseLI	CCNNNNNNNGG	5 cut(s)	125, 539, 1078, 1496, 1772
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	3 cut(s)	210, 573, 719
BseNI	ACTGG	8 cut(s)	128, 132, 145, 741, 754, 997, 1088, 1200
BseRI	GAGGAG	2 cut(s)	237, 555
BseSI	GKGCMC	1 cut(s)	1447
BseXI	GCAGC	3 cut(s)	766, 961, 1555
BsgI	GTGCAG	1 cut(s)	1554
Bsh1236I	CGCG	1 cut(s)	1044
BshFI	GGCC	5 cut(s)	282, 1087, 1238, 1445, 1579
BshNI	GGYRCC	1 cut(s)	1303
BshTI	ACCGGT	1 cut(s)	1772
BsiHKAI	GWGCWC	1 cut(s)	1724
BsiSI	CCGG	2 cut(s)	1307, 1773
BslFI	GGGAC	3 cut(s)	537, 747, 816
BslI	CCNNNNNNNGG	5 cut(s)	125, 539, 1078, 1496, 1772
BsmAI	GTCTC	2 cut(s)	449, 1164
BsmFI	GGGAC	3 cut(s)	537, 747, 816
BsmI	GAATGC	1 cut(s)	238
BsnI	GGCC	5 cut(s)	282, 1087, 1238, 1445, 1579
Bsp119I	TTCGAA	1 cut(s)	1686
Bsp120I	GGGCCC	1 cut(s)	1443
Bsp1286I	GDGCHC	2 cut(s)	1447, 1724
Bsp1407I	TGTACA	2 cut(s)	225, 1162
Bsp19I	CCATGG	2 cut(s)	283, 1766
BspACI	CCGC	3 cut(s)	238, 314, 1615
BspANI	GGCC	5 cut(s)	282, 1087, 1238, 1445, 1579
BspCNI	CTCAG	3 cut(s)	211, 574, 720
BspFNI	CGCG	1 cut(s)	1044
BspLI	GGNNCC	9 cut(s)	130, 553, 832, 1305, 1445, 1488, 1501, 1619, 1644
BspMAI	CTGCAG	3 cut(s)	747, 1594, 1714
BspPI	GGATC	7 cut(s)	333, 747, 791, 1481, 1494, 1637, 1650
BspQI	GCTCTTC	1 cut(s)	1683
BspT104I	TTCGAA	1 cut(s)	1686
BspT107I	GGYRCC	1 cut(s)	1303
BsrDI	GCAATG	1 cut(s)	20
BsrFI	RCCGGY	1 cut(s)	1772
BsrGI	TGTACA	2 cut(s)	225, 1162
BsrI	ACTGG	8 cut(s)	128, 132, 145, 741, 754, 997, 1088, 1200
BssAI	RCCGGY	1 cut(s)	1772
BssECI	CCNNGG	7 cut(s)	283, 328, 1108, 1490, 1623, 1654, 1766
BssNAI	GTATAC	1 cut(s)	848
BssT1I	CCWWGG	5 cut(s)	283, 1108, 1490, 1654, 1766
Bst1107I	GTATAC	1 cut(s)	848
Bst2UI	CCWGG	2 cut(s)	383, 1276
Bst4CI	ACNGT	7 cut(s)	298, 350, 643, 1055, 1355, 1381, 1551
Bst6I	CTCTTC	3 cut(s)	532, 1245, 1683
BstAUI	TGTACA	2 cut(s)	225, 1162
BstBI	TTCGAA	1 cut(s)	1686
BstC8I	GCNNGC	2 cut(s)	238, 1042
BstDEI	CTNAG	6 cut(s)	219, 277, 582, 728, 1215, 1574
BstDSI	CCRYGG	3 cut(s)	283, 1623, 1766
BstF5I	GGATG	7 cut(s)	378, 862, 952, 983, 1069, 1331, 1633
BstFNI	CGCG	1 cut(s)	1044
BstHHI	GCGC	2 cut(s)	1046, 1556
BstMAI	GTCTC	2 cut(s)	449, 1164
BstMWI	GCNNNNNNNGC	2 cut(s)	1041, 1093
BstNI	CCWGG	2 cut(s)	383, 1276
BstSCI	CCNGG	2 cut(s)	381, 1274
BstSFI	CTRYAG	5 cut(s)	743, 1290, 1351, 1590, 1710
BstSLI	GKGCMC	1 cut(s)	1447
BstUI	CGCG	1 cut(s)	1044
BstV1I	GCAGC	3 cut(s)	766, 961, 1555
BstV2I	GAAGAC	2 cut(s)	364, 1788
BstX2I	RGATCY	6 cut(s)	85, 338, 739, 1486, 1642, 1801
BstYI	RGATCY	6 cut(s)	85, 338, 739, 1486, 1642, 1801
BstZ17I	GTATAC	1 cut(s)	848
BsuI	GTATCC	3 cut(s)	148, 1289, 1661
BsuRI	GGCC	5 cut(s)	282, 1087, 1238, 1445, 1579
BtgI	CCRYGG	3 cut(s)	283, 1623, 1766
BtsCI	GGATG	7 cut(s)	378, 862, 952, 983, 1069, 1331, 1633
BtsI	GCAGTG	2 cut(s)	165, 1158
BtsIMutI	CAGTG	4 cut(s)	138, 165, 355, 1158
Cac8I	GCNNGC	2 cut(s)	238, 1042
CfoI	GCGC	2 cut(s)	1046, 1556
Cfr10I	RCCGGY	1 cut(s)	1772
Cfr13I	GGNCC	9 cut(s)	551, 830, 1055, 1198, 1443, 1444, 1500, 1617, 1770
Csp6I	GTAC	8 cut(s)	16, 200, 226, 861, 1018, 1051, 1163, 1707
CspAI	ACCGGT	1 cut(s)	1772
CviAII	CATG	8 cut(s)	284, 934, 1021, 1139, 1300, 1399, 1585, 1767
CviQI	GTAC	8 cut(s)	16, 200, 226, 861, 1018, 1051, 1163, 1707
DdeI	CTNAG	6 cut(s)	219, 277, 582, 728, 1215, 1574
DraI	TTTAAA	1 cut(s)	804
EaeI	YGGCCR	1 cut(s)	1236
Eam1104I	CTCTTC	3 cut(s)	532, 1245, 1683
EarI	CTCTTC	3 cut(s)	532, 1245, 1683
EciI	GGCGGA	1 cut(s)	1630
Ecl136II	GAGCTC	1 cut(s)	1722
Eco130I	CCWWGG	5 cut(s)	283, 1108, 1490, 1654, 1766
Eco147I	AGGCCT	1 cut(s)	1579
Eco24I	GRGCYC	2 cut(s)	1447, 1724
Eco32I	GATATC	1 cut(s)	1221
Eco47I	GGWCC	7 cut(s)	551, 830, 1055, 1198, 1500, 1617, 1770
Eco53kI	GAGCTC	1 cut(s)	1722
Eco57I	CTGAAG	2 cut(s)	1496, 1782
EcoICRI	GAGCTC	1 cut(s)	1722
EcoO109I	RGGNCCY	1 cut(s)	1444
EcoRII	CCWGG	2 cut(s)	381, 1274
EcoRV	GATATC	1 cut(s)	1221
EcoT14I	CCWWGG	5 cut(s)	283, 1108, 1490, 1654, 1766
EcoT38I	GRGCYC	2 cut(s)	1447, 1724
ErhI	CCWWGG	5 cut(s)	283, 1108, 1490, 1654, 1766
FaeI	CATG	8 cut(s)	287, 937, 1024, 1142, 1303, 1402, 1588, 1770
FaqI	GGGAC	3 cut(s)	537, 747, 816
FatI	CATG	8 cut(s)	283, 933, 1020, 1138, 1299, 1398, 1584, 1766
FauI	CCCGC	1 cut(s)	245
FbaI	TGATCA	1 cut(s)	1699
FblI	GTMKAC	4 cut(s)	375, 837, 847, 1350
Fnu4HI	GCNGC	3 cut(s)	780, 950, 1569
FokI	GGATG	7 cut(s)	365, 869, 939, 990, 1076, 1338, 1640
FriOI	GRGCYC	2 cut(s)	1447, 1724
Fsp4HI	GCNGC	3 cut(s)	780, 950, 1569
FspBI	CTAG	3 cut(s)	488, 962, 1109
GlaI	GCGC	2 cut(s)	1045, 1555
GluI	GCNGC	3 cut(s)	780, 950, 1569
HaeIII	GGCC	5 cut(s)	282, 1087, 1238, 1445, 1579
HapII	CCGG	2 cut(s)	1307, 1773
HhaI	GCGC	2 cut(s)	1046, 1556
Hin1II	CATG	8 cut(s)	287, 937, 1024, 1142, 1303, 1402, 1588, 1770
Hin6I	GCGC	2 cut(s)	1044, 1554
HinP1I	GCGC	2 cut(s)	1044, 1554
HindIII	AAGCTT	1 cut(s)	1241
HinfI	GANTC	5 cut(s)	63, 493, 527, 543, 1145
HpaII	CCGG	2 cut(s)	1307, 1773
HphI	GGTGA	2 cut(s)	751, 1670
Hpy166II	GTNNAC	7 cut(s)	41, 228, 376, 838, 848, 922, 1351
Hpy188I	TCNGA	8 cut(s)	220, 329, 583, 729, 1225, 1504, 1759, 1801
Hpy188III	TCNNGA	5 cut(s)	488, 714, 911, 1058, 1640
Hpy8I	GTNNAC	7 cut(s)	41, 228, 376, 838, 848, 922, 1351
HpyAV	CCTTC	7 cut(s)	53, 394, 812, 1150, 1604, 1693, 1709
HpyCH4III	ACNGT	7 cut(s)	298, 350, 643, 1055, 1355, 1381, 1551
HpyCH4IV	ACGT	1 cut(s)	1793
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1041, 1093
HpyF3I	CTNAG	6 cut(s)	219, 277, 582, 728, 1215, 1574
HpySE526I	ACGT	1 cut(s)	1793
Hsp92II	CATG	8 cut(s)	287, 937, 1024, 1142, 1303, 1402, 1588, 1770
HspAI	GCGC	2 cut(s)	1044, 1554
Ksp22I	TGATCA	1 cut(s)	1699
LguI	GCTCTTC	1 cut(s)	1683
LmnI	GCTCC	4 cut(s)	98, 635, 1719, 1727
Lsp1109I	GCAGC	3 cut(s)	766, 961, 1555
LweI	GCATC	2 cut(s)	961, 1750
MaeI	CTAG	3 cut(s)	488, 962, 1109
MaeII	ACGT	1 cut(s)	1793
MaeIII	GTNAC	3 cut(s)	1191, 1736, 1783
MflI	RGATCY	6 cut(s)	85, 338, 739, 1486, 1642, 1801
MhlI	GDGCHC	2 cut(s)	1447, 1724
MlsI	TGGCCA	1 cut(s)	1238
MluNI	TGGCCA	1 cut(s)	1238
MlyI	GAGTC	2 cut(s)	72, 552
MmeI	TCCRAC	4 cut(s)	325, 334, 601, 613
Mox20I	TGGCCA	1 cut(s)	1238
MroXI	GAANNNNTTC	2 cut(s)	723, 1635
MscI	TGGCCA	1 cut(s)	1238
MseI	TTAA	8 cut(s)	450, 474, 662, 774, 803, 876, 1676, 1822
Msp20I	TGGCCA	1 cut(s)	1238
MspA1I	CMGCKG	1 cut(s)	1568
MspI	CCGG	2 cut(s)	1307, 1773
MspR9I	CCNGG	2 cut(s)	383, 1276
Mva1269I	GAATGC	1 cut(s)	238
MvaI	CCWGG	2 cut(s)	383, 1276
MvnI	CGCG	1 cut(s)	1044
MwoI	GCNNNNNNNGC	2 cut(s)	1041, 1093
NcoI	CCATGG	2 cut(s)	283, 1766
NlaIII	CATG	8 cut(s)	287, 937, 1024, 1142, 1303, 1402, 1588, 1770
NlaIV	GGNNCC	9 cut(s)	130, 553, 832, 1305, 1445, 1488, 1501, 1619, 1644
NmuCI	GTSAC	1 cut(s)	1736
NspV	TTCGAA	1 cut(s)	1686
PceI	AGGCCT	1 cut(s)	1579
PciSI	GCTCTTC	1 cut(s)	1683
PctI	GAATGC	1 cut(s)	238
PdmI	GAANNNNTTC	2 cut(s)	723, 1635
PfeI	GAWTC	3 cut(s)	493, 527, 1145
PfoI	TCCNGGA	1 cut(s)	381
PinAI	ACCGGT	1 cut(s)	1772
PkrI	GCNGC	3 cut(s)	781, 951, 1570
PleI	GAGTC	2 cut(s)	71, 551
PpsI	GAGTC	2 cut(s)	71, 551
Psp124BI	GAGCTC	1 cut(s)	1724
Psp6I	CCWGG	2 cut(s)	381, 1274
PspGI	CCWGG	2 cut(s)	381, 1274
PspN4I	GGNNCC	9 cut(s)	130, 553, 832, 1305, 1445, 1488, 1501, 1619, 1644
PspOMI	GGGCCC	1 cut(s)	1443
PspPI	GGNCC	9 cut(s)	551, 830, 1055, 1198, 1443, 1444, 1500, 1617, 1770
PstI	CTGCAG	3 cut(s)	747, 1594, 1714
PsuI	RGATCY	6 cut(s)	85, 338, 739, 1486, 1642, 1801
PvuII	CAGCTG	1 cut(s)	1568
RsaI	GTAC	8 cut(s)	17, 201, 227, 862, 1019, 1052, 1164, 1708
RsaNI	GTAC	8 cut(s)	16, 200, 226, 861, 1018, 1051, 1163, 1707
SacI	GAGCTC	1 cut(s)	1724
SapI	GCTCTTC	1 cut(s)	1683
SaqAI	TTAA	8 cut(s)	450, 474, 662, 774, 803, 876, 1676, 1822
SatI	GCNGC	3 cut(s)	780, 950, 1569
Sau96I	GGNCC	9 cut(s)	551, 830, 1055, 1198, 1443, 1444, 1500, 1617, 1770
ScaI	AGTACT	2 cut(s)	17, 1708
SchI	GAGTC	2 cut(s)	72, 552
ScrFI	CCNGG	2 cut(s)	383, 1276
SduI	GDGCHC	2 cut(s)	1447, 1724
SfaNI	GCATC	2 cut(s)	961, 1750
SfcI	CTRYAG	5 cut(s)	743, 1290, 1351, 1590, 1710
SfuI	TTCGAA	1 cut(s)	1686
SinI	GGWCC	7 cut(s)	551, 830, 1055, 1198, 1500, 1617, 1770
SmlI	CTYRAG	1 cut(s)	763
SmoI	CTYRAG	1 cut(s)	763
SseBI	AGGCCT	1 cut(s)	1579
SsiI	CCGC	3 cut(s)	238, 314, 1615
SspMI	CTAG	3 cut(s)	488, 962, 1109
SstI	GAGCTC	1 cut(s)	1724
StuI	AGGCCT	1 cut(s)	1579
StyD4I	CCNGG	2 cut(s)	381, 1274
StyI	CCWWGG	5 cut(s)	283, 1108, 1490, 1654, 1766
TaaI	ACNGT	7 cut(s)	298, 350, 643, 1055, 1355, 1381, 1551
TaiI	ACGT	1 cut(s)	1796
TaqI	TCGA	3 cut(s)	896, 1408, 1686
TatI	WGTACW	5 cut(s)	15, 225, 1017, 1162, 1706
TfiI	GAWTC	3 cut(s)	493, 527, 1145
Tru1I	TTAA	8 cut(s)	450, 474, 662, 774, 803, 876, 1676, 1822
Tru9I	TTAA	8 cut(s)	450, 474, 662, 774, 803, 876, 1676, 1822
TscAI	CASTG	4 cut(s)	145, 172, 355, 1158
TseFI	GTSAC	1 cut(s)	1736
TseI	GCWGC	3 cut(s)	779, 949, 1568
Tsp45I	GTSAC	1 cut(s)	1736
TspDTI	ATGAA	6 cut(s)	491, 1263, 1415, 1644, 1677, 1743
TspGWI	ACGGA	1 cut(s)	376
TspRI	CASTG	4 cut(s)	145, 172, 355, 1158
VpaK11BI	GGWCC	7 cut(s)	551, 830, 1055, 1198, 1500, 1617, 1770
XapI	RAATTY	4 cut(s)	68, 104, 914, 1075
XbaI	TCTAGA	1 cut(s)	487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	120
XmaJI	CCTAGG	1 cut(s)	1108
XmiI	GTMKAC	4 cut(s)	375, 837, 847, 1350
XmnI	GAANNNNTTC	2 cut(s)	723, 1635
XspI	CTAG	3 cut(s)	488, 962, 1109
ZrmI	AGTACT	2 cut(s)	17, 1708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.